Cmc08g0228661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0228661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Nodulin-like domain-containing protein
Location	CMiso1.1chr08: 22909408 .. 22909821 (+)
RNA-Seq Expression	Cmc08g0228661
Synteny	Cmc08g0228661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACAACTTTACCATGCTATGTATGGAGAGAACAACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCCGCCATTTCATTAGCTTCTCTTCCATTCATTCGACATATAAACTCCAACAACAACCAACGAAATGACCTCAAACCATTCTATAACCTTCTTTACATATCCCTTGCCCTGGCTGCTTCTCTCCTTGCCATTATTATCCCTCAAACTAAAATTCACTTCTCTAAAACTGACTACATCGCTGTCGCTTCTCTCGTCATTCTCTTTCTCCTCCTCCTGCTTGCCATCGTTGTAAACCAAGAACTCACCCTCCACAATCACCCACCCCCAATAACGTCGATACTAGTACAATCATCATCACCACACCTGACAACGATGTCAAGGAGTAGTAATTGGTACTAA

mRNA sequence

ATGACACAACTTTACCATGCTATGTATGGAGAGAACAACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCCGCCATTTCATTAGCTTCTCTTCCATTCATTCGACATATAAACTCCAACAACAACCAACGAAATGACCTCAAACCATTCTATAACCTTCTTTACATATCCCTTGCCCTGGCTGCTTCTCTCCTTGCCATTATTATCCCTCAAACTAAAATTCACTTCTCTAAAACTGACTACATCGCTGTCGCTTCTCTCGTCATTCTCTTTCTCCTCCTCCTGCTTGCCATCGTTGTAAACCAAGAACTCACCCTCCACAATCACCCACCCCCAATAACGTCGATACTAGTACAATCATCATCACCACACCTGACAACGATGTCAAGGAGTAGTAATTGGTACTAA

Coding sequence (CDS)

ATGACACAACTTTACCATGCTATGTATGGAGAGAACAACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCCGCCATTTCATTAGCTTCTCTTCCATTCATTCGACATATAAACTCCAACAACAACCAACGAAATGACCTCAAACCATTCTATAACCTTCTTTACATATCCCTTGCCCTGGCTGCTTCTCTCCTTGCCATTATTATCCCTCAAACTAAAATTCACTTCTCTAAAACTGACTACATCGCTGTCGCTTCTCTCGTCATTCTCTTTCTCCTCCTCCTGCTTGCCATCGTTGTAAACCAAGAACTCACCCTCCACAATCACCCACCCCCAATAACGTCGATACTAGTACAATCATCATCACCACACCTGACAACGATGTCAAGGAGTAGTAATTGGTACTAA

Protein sequence

MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISLALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILVQSSSPHLTTMSRSSNWY

Homology

[Close]

BLAST of Cmc08g0228661 vs. NCBI nr
Match: KAA0034907.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 6.1e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL
Sbjct: 136 MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 195

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
           ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV
Sbjct: 196 ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 255

Query: 121 QSSSPHLTTMSRSSNWY 138
           QSSSPHLTTMSRSSNWY
Sbjct: 256 QSSSPHLTTMSRSSNWY 272

[Close]

BLAST of Cmc08g0228661 vs. NCBI nr
Match: TYK05449.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 4.0e-66
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL
Sbjct: 166 MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 225

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
           ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLL LAIVVNQELTLHNHPPPITSILV
Sbjct: 226 ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLPLAIVVNQELTLHNHPPPITSILV 285

Query: 121 QSSSPHLTTMSRSSNWY 138
           QSSSPHLTTMSRSSNWY
Sbjct: 286 QSSSPHLTTMSRSSNWY 302

[Close]

BLAST of Cmc08g0228661 vs. NCBI nr
Match: XP_004146405.3 (protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis sativus] >KAE8649721.1 hypothetical protein Csa_011975 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 5.0e-61
Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           MTQLYHAMYGE+NPEGLILMIAWLPSAISLASLPFIR INSNNNQRNDLKPFYNLLYISL
Sbjct: 166 MTQLYHAMYGEDNPEGLILMIAWLPSAISLASLPFIRLINSNNNQRNDLKPFYNLLYISL 225

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
           ALAASLLAIIIPQTK HFSKTDYIAVAS ++LFLLL LA+VVNQELTLHNHPPPITSILV
Sbjct: 226 ALAASLLAIIIPQTKTHFSKTDYIAVASPIVLFLLLPLAVVVNQELTLHNHPPPITSILV 285

Query: 121 QSSSPHLTTMSRSSNWY 138
           QS SP LTTMSRSSNWY
Sbjct: 286 QSPSPQLTTMSRSSNWY 302

[Close]

BLAST of Cmc08g0228661 vs. NCBI nr
Match: RDX69946.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Mucuna pruriens])

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-19
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           + QLYHA YG++NP+ LIL+IAWLP+A+S   LP IR +N+  +Q ND K FY+LLYISL
Sbjct: 171 IAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRILNT-VHQTNDNKVFYHLLYISL 230

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
            LA  L+ +II Q K+ F++++YIA   +V  FLLL L +VV +EL   N     T  L 
Sbjct: 231 GLAGFLMVLIIVQNKLSFTRSEYIADGVVVFFFLLLPLVVVVREEL---NQLKAKTQALT 290

Query: 121 QSSS 125
            S+S
Sbjct: 291 DSAS 290

[Close]

BLAST of Cmc08g0228661 vs. NCBI nr
Match: XP_020211656.2 (protein NUCLEAR FUSION DEFECTIVE 4 [Cajanus cajan] >KYP70914.1 putative transporter MCH1 [Cajanus cajan])

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-18
Identity = 54/105 (51.43%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           + QLYHA YG++NP+ LIL+IAWLP+A+S   LP IR +N+  +Q N+ K FY+LLYISL
Sbjct: 165 IAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRILNT-LHQPNENKVFYHLLYISL 224

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQE 106
           ALA  L+ +II Q K+ F++++Y+A   +V  FLLL L +V  +E
Sbjct: 225 ALAGFLMVLIIMQNKLSFTRSEYVADGIVVFFFLLLPLVVVFREE 268

[Close]

BLAST of Cmc08g0228661 vs. ExPASy TrEMBL
Match: A0A5A7T006 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00360 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.0e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL
Sbjct: 136 MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 195

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
           ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV
Sbjct: 196 ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 255

Query: 121 QSSSPHLTTMSRSSNWY 138
           QSSSPHLTTMSRSSNWY
Sbjct: 256 QSSSPHLTTMSRSSNWY 272

[Close]

BLAST of Cmc08g0228661 vs. ExPASy TrEMBL
Match: A0A5D3C4Y9 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001510 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL
Sbjct: 166 MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 225

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
           ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLL LAIVVNQELTLHNHPPPITSILV
Sbjct: 226 ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLPLAIVVNQELTLHNHPPPITSILV 285

Query: 121 QSSSPHLTTMSRSSNWY 138
           QSSSPHLTTMSRSSNWY
Sbjct: 286 QSSSPHLTTMSRSSNWY 302

[Close]

BLAST of Cmc08g0228661 vs. ExPASy TrEMBL
Match: A0A0A0L178 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G507390 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.4e-61
Identity = 127/137 (92.70%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           MTQLYHAMYGE+NPEGLILMIAWLPSAISLASLPFIR INSNNNQRNDLKPFYNLLYISL
Sbjct: 166 MTQLYHAMYGEDNPEGLILMIAWLPSAISLASLPFIRLINSNNNQRNDLKPFYNLLYISL 225

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
           ALAASLLAIIIPQTK HFSKTDYIAVAS ++LFLLL LA+VVNQELTLHNHPPPITSILV
Sbjct: 226 ALAASLLAIIIPQTKTHFSKTDYIAVASPIVLFLLLPLAVVVNQELTLHNHPPPITSILV 285

Query: 121 QSSSPHLTTMSRSSNWY 138
           QS SP LTTMSRSSNWY
Sbjct: 286 QSPSPQLTTMSRSSNWY 302

[Close]

BLAST of Cmc08g0228661 vs. ExPASy TrEMBL
Match: A0A371EVF0 (Protein NUCLEAR FUSION DEFECTIVE 4 (Fragment) OS=Mucuna pruriens OX=157652 GN=NFD4 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           + QLYHA YG++NP+ LIL+IAWLP+A+S   LP IR +N+  +Q ND K FY+LLYISL
Sbjct: 171 IAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRILNT-VHQTNDNKVFYHLLYISL 230

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHNHPPPITSILV 120
            LA  L+ +II Q K+ F++++YIA   +V  FLLL L +VV +EL   N     T  L 
Sbjct: 231 GLAGFLMVLIIVQNKLSFTRSEYIADGVVVFFFLLLPLVVVVREEL---NQLKAKTQALT 290

Query: 121 QSSS 125
            S+S
Sbjct: 291 DSAS 290

[Close]

BLAST of Cmc08g0228661 vs. ExPASy TrEMBL
Match: A0A151TV96 (Putative transporter MCH1 OS=Cajanus cajan OX=3821 GN=KK1_010155 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 54/105 (51.43%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           + QLYHA YG++NP+ LIL+IAWLP+A+S   LP IR +N+  +Q N+ K FY+LLYISL
Sbjct: 165 IAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRILNT-LHQPNENKVFYHLLYISL 224

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQE 106
           ALA  L+ +II Q K+ F++++Y+A   +V  FLLL L +V  +E
Sbjct: 225 ALAGFLMVLIIMQNKLSFTRSEYVADGIVVFFFLLLPLVVVFREE 268

[Close]

BLAST of Cmc08g0228661 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 2   TQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISLA 61
           TQLY A+YG ++ + LIL+IAWLP+A+SL  +  IR       QRN+L  FY  LYIS+ 
Sbjct: 164 TQLYFAIYGHDS-KSLILLIAWLPAAVSLVFVYLIRE-KKVVRQRNELSVFYQFLYISIF 223

Query: 62  LAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLHN 111
           LA  L+A+ I + ++HFSK  Y A A++    L + L + V QEL + N
Sbjct: 224 LALFLMAMNIAEKQVHFSKAAYAASATICCALLFVPLTVSVKQELEVWN 270

[Close]

BLAST of Cmc08g0228661 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 4.4e-15
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 0


Query: 1   MTQLYHAMYGENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYISL 60
           +TQLY A YGE+  E LILMI WLP+ +S A L  IR I     Q N+LK FYN LYISL
Sbjct: 167 ITQLYRAFYGEDTKE-LILMIGWLPAIVSFAFLRTIR-IMKVKRQTNELKVFYNFLYISL 226

Query: 61  ALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVVNQELTLH-------NHPP 119
            LA  L+ +II      F+++++   A++VI+ LLL + +V+ +E  L        N P 
Sbjct: 227 GLATFLMVVIIINKLSGFTQSEFGGSAAVVIVLLLLPIIVVILEEKKLWKEKQVALNDPA 286

[Close]

BLAST of Cmc08g0228661 vs. TAIR 10
Match: AT2G34355.1 (Major facilitator superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.6e-04
Identity = 40/134 (29.85%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 1   MTQLYHAMY-GENNPEGLILMIAWLPSAISLASLPFIRHINSNNNQRNDLKPFYNLLYIS 60
           + QLYHA+  GE NP   IL++A +P+ +   ++PF+R   +     +D K    L  IS
Sbjct: 161 LIQLYHAVCGGEGNPATFILLLAIVPTLVMFLAMPFVRVYETVT--ISDKKHLDGLSAIS 220

Query: 61  LALAASLLAIIIPQTKIHFSKTDYIAVASLVILFLLLLLAIVV------NQELTLHNHPP 120
           + +AA L+ +I  +  +  S++  I    LV+L L   L + V       Q L+  + P 
Sbjct: 221 MIIAAYLMVVITVENVLGLSRSMQIFSFILVLLLLASPLLVAVRALREKRQTLSSLDGPV 280

Query: 121 PITSILVQSSSPHL 128
             TS L+   S ++
Sbjct: 281 LDTSALLDPPSSNI 292

The following BLAST results are available for this feature:

BLAST of Cmc08g0228661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034907.1	6.1e-67	100.00	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa]	[more]
TYK05449.1	4.0e-66	99.27	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa]	[more]
XP_004146405.3	5.0e-61	92.70	protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis sativus] >KAE8649721.1 hypothetical ...	[more]
RDX69946.1	2.8e-19	50.00	Protein NUCLEAR FUSION DEFECTIVE 4, partial [Mucuna pruriens]	[more]
XP_020211656.2	3.1e-18	51.43	protein NUCLEAR FUSION DEFECTIVE 4 [Cajanus cajan] >KYP70914.1 putative transpor...	[more]

BLAST of Cmc08g0228661 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc08g0228661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T006	3.0e-67	100.00	Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3C4Y9	1.9e-66	99.27	Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0L178	2.4e-61	92.70	Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G50739...	[more]
A0A371EVF0	1.3e-19	50.00	Protein NUCLEAR FUSION DEFECTIVE 4 (Fragment) OS=Mucuna pruriens OX=157652 GN=NF...	[more]
A0A151TV96	1.5e-18	51.43	Putative transporter MCH1 OS=Cajanus cajan OX=3821 GN=KK1_010155 PE=4 SV=1	[more]

BLAST of Cmc08g0228661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28120.1	1.5e-15	44.95	Major facilitator superfamily protein	[more]
AT2G39210.1	4.4e-15	43.20	Major facilitator superfamily protein	[more]
AT2G34355.1	4.6e-04	29.85	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010658	Nodulin-like	PFAM	PF06813	Nodulin-like	coord: 1..101 e-value: 3.1E-17 score: 62.9
None	No IPR available	PANTHER	PTHR21576:SF122	MFS TRANSPORTER	coord: 1..116
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0228661.1	Cmc08g0228661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane