Cmc08g0228631 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0228631
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	zinc finger CCCH domain-containing protein 36-like
Location	CMiso1.1chr08: 22894361 .. 22901477 (+)
RNA-Seq Expression	Cmc08g0228631
Synteny	Cmc08g0228631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTTATTTATATTTTATTAATATCCTCCGGGCTTCACCGTTCTCCGCCAATTCCCAATCTCTCTCTAATTTTTCTCCATAGCTTTTTTAAAAACCTCAATATCCCTTTATCCACCATAACCCTCCGACACTAGGGTTAGGGTTTTTTCCACTTCTTCTTCTTCTTCTTCTTCTTCTACTACTACTACTTTCCCTTTTCAATTTTTTTTTTCCATTTCCTTCCTTCCTCTAATCTCTGCAACCGTTTGTTCACTCGTTGCTTTTCTTTTTTCGATTTACTTTTCTCGATCTCGATCTGTGCTTCTCTTCAATGGATATGCGCAAGCGAGGGAGGCCCGAAGCTGCCTTCAATTCTAATGGTTCATTTAAGAAGCATAAGCAAGGTTCGTTTTTCTTTATTTTTTATTTTTTTAATTAAAAAAAGCTCTAGTTTATGCTTTGTATGGTTGCTTATAGTAGGCAGGAGTGGCAAATTATGTGCGTGGTTATTGCTTTGTTTTGTTCAATGTAGGGGTATGAACGATTGTTGGTTTCTGCTTGTTATTCGTTTCTTTTCTGTAGTTAGAATTGTCGCTTTTACTGTCTTAGTGGTTCATCTTGCATTTCTTTCTACGGATTTTTGAGTTTGATTACGAGTATTTGTGGCTCCATGTGTTCGTACTTGTGGTTTACCCTTATATTTGCGTCTATTACAATTTTCTTTTACTGTATTGTTACTTTTCTTTGTTTAAACTAGAGATGACTGGAAATACTCCCTCAGAAAGTGGATCTGCTTCCAGTAAATGAAGGTGGTTCTTGTTTGTAGGTTATGAGACTAAGGGAAGGGTTTTTTTATGACTAGTGGTGAAGTAGGAAAGTGAGTAATTGGACAATTTTAGAACTATATCTGTTCGTCATGAGTTTTGGGATCATTTTAGGGTTTTTGGTCTTCATTGTCATTCTTTAACCAAGTGTCCAATTGGGCTCAGTATAGAATTGTGTTATTATGGGTAACTTTAGAGCCCTTTTTTCTTGTTCTCCATGACTTCTTTGTTTTTCATCAACATTCTCAACTCAACAGACCATGGTTGGTTTCTCTCCACTCTTAATGCCTCACGATCAACCATTAGTACTTTACTACTTTATCCAGTAGTCTGTTGAGATTGTTGATAAAAAACAAAAAATCGGGAGGAAGATCCCTTGCCTTATACCTCTTGTCTTGGTGCAAGTATTCTACTCCTTGGACTAGTAGCTAGCATTTCTAATGCTTCTTTGCTTCAAATTTCGCCATTTGTTGCAAACTTGAAATTATCGTTAACAAAATTCCTATCAGTTCAATCTCTCTTTTGTTTTATTTTGTGGTCCTTATTCATGATTTGGGGGTGTTCAGTTATATGTTACTTTATCTCTTATTCTTGGCTATTACTTTCAAGCCTGTTAGTAAGAGATAACATGTGGCTTCAAAAACTCTAGGGTTTTTGTGACTTAGAAATACTGGTCACCATTTATCAAAATTGCTTGTTATCATACTAGGAGCCTTCTGTAAACCAGGTTCTTGGTGATTATTTATATACTGGCTTGTTGACTTCAACTGATGCAGTCCATCTCTAAGGAACTCCTTTCAGCAGAACCTCCCCCAAATCTTGGTCCTTAACCGCACAATATTCAGGGTGAAACTCCACATAAACATTATTATCATGAGCAAGTTAGATACACTAAAAAGATTCTTGGCAATTGTAGGAACGCATAAAACATCATTTAATTTCAGATAGCCGTTCTTGAAAACAAGATTTATCGAGATATAGGCAGTTGTGGACCATTACCAACAATAACCCACTCATTACCTGCATAGTCAACTGAAAAATTCAAGAAGTTTTGATTGGCTGTAACATGATTCAACGCACCACTGTCAGCATACCAGTTCGGATCTGCCACAACTTCAGGATTAGCAACAGCAGAGTTTGCAACTAGGGCTTTAGGATTAGTGTGTTGTCCTTGGTTTGGAGTAAAATTTGATTCAGCTCTGTGATGAGTTTGGTTTGGATTATTCATCTCTTTGTTAAAGCGGAAAAAATAGACTGCTGCTGTATGACTAAGTTCTCCTCTTTGTACCATATTAACAGATGAAGTATTATTATTAACAGAAAGAGATAGATTAGACAAATCAGATTTCAACATGAGTTGATACTCCAGCCAAGCTTCATAGGCAAGCAAATCAGACTGTATATCAGTCCATGAACTGCCATACTTACCTTGGATCGATACACCTGCCAGACTATACTCTTCATCAAGTCCTGCAAGAACCTGAGAAACAAGATTGCTGACTAAAACAGGGCTACCGGCTAGGGCCAAACCATCAGAATACTTTTTCATTCGACTAAAATACTCATTCACTTTTTACGATCCTTTGCAAGAAGTTTAAAAAAGTCGTATGAAATAGTCAATTTCAGAACTATATTGCATTCCAAAGAGCTATTGTACAGTGTTTTAAAAGGTGCATCAAGGCACGTGCCTAGGCTCAAGTGGCGCGGCTGGGGCTTATTCATGAAGAGGCAAGGTGTTTTCAATAAGGCTCGGCTTAGGCGTGCGCTTTCCTCCCGGCGCAATATGCGTGGGTTTTTTTATGAAGTGTGGGTTGGGCTTTAATTAAACAAAATTATTATATATTTTTTTTAAACCTATTACGTGAAAGTTAAGAAACCACTCTTCTTGTCCCATTTAAAGTACCGTGCGGCTTCTTTTCTTCAACGAACGTCTTCCTCTACCTCTTCCTTTCCCTTTCTGCTTCTGCCTTCAACGAATCTCTGTCACTGGCGACGGCAAAGGCCACTGGCCACCCTTTTTCTTCTTCACACAAAACGTCAAAAGTTGGCTTTTCCATCCCATCTTCTTCAAAGCAAATATTTGGTACTGCCATTACTCTGTTTTTTGGTGCAAAAACAGAGGAGAAGAGAAGACCAAGAGGCTTCCCAAAATCATTACCATTACCGGTTAGCCAAATTTGCAATTTTTTTAACATAAATAAAGTTTGATCTTTATTTATGTGAATGAAGACGAGGATCAATTTAGTGATGATGAGTTTGATCATTAGGAATAAACTTTTATTTTGATTGTTGTTGAATGCTGATGAGTTTTCTGTTGTGTTTTGTTTTTTTGGGTAGAAAACTAATATTATAATATTTTATACATTAAAGTTAATTCTCATTTCCACCTTGGTTATGTATTTATATTTTATACATCGTTGCTCCTTTCAATTTTGTGTATACATATATATTCTTTATATAGCGCGCTCATGAAAAAAAGCCTGCACGTTTTTGTAAAGCATAACAGACTGGAAAACGTAAAGCTTCTAGAATGGGATTCCCAGTGTCGGCTGGGAGAATCCACATCACATCACCTGCCTCATGTTTCTGAGTCACTATTTTGACTGGTCTGTTACTGTTTAAGTAACTCAGCCTACCAGCATTTTTGAGTTGTATATACATCTTAGGGGATGAGTTGAATATGAAAGGAAAGTTTCAAGAATTGTGACTTAGAACTCAATGACAGTTGTATAACCCATAGAATAGTTCTTGTTCAAGCAAGGTCGCGTTTCAAGAATTATGACTTTAAGAACAATTCCTAAACATCATGTTCATTTGCTACCATATTCTACACTTTCTTATGTCATATTTATATATGGTCAGCAATCAAGATACACTTAGGATCAAGACAAAAGTTTGTTTTTTGGCTATAAGTTTATTATATCCTTGGTTCAGTCATTAGGACTATAGCGAAGGCTTAGATTGGAGGGTTAAAATATTTTATCTACCATTGATGAGATTCAGTTTTAGGTGGGTTTCCGCTCCCCGTCCCCTTTTATTTGATGTTTGGTCGTTCTGTATTTATTACAATTTTAGGTGACCTTGCAATCCAACTGAAACAGTTGACATTACCCAATTCATATATTAAAAATGTTACCCTACAGTAACAGAAAGCTACAAATTATTTAGTAATTTTGTTAGTTGCCTAAATAATTTAAATGTAAAGATGTATTAAAGTATTGGAGTAAAAATCTTAACAAATTATAACTGAGAAAGAACAATTAATGTTTTGCAACAGAATTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGGTTCATATCTTACCTACCTAAATGAGTACTTGAACTGTATATTATCTTTCCCTAACGATCTAAACTTGCTGTAAGAATTTAATTGATCACGAGTTTCAAATTAAAGCTGAGTCATTATGCTTCTGAAAACTGGGAGCACAGGTATAAACTATTACTCTAAGCCTTCAACCAAGGAAATAAAATTTTAAAAACCAGACTTATTAATGAGCTTTAGAAACTTTCTCAATTATTACAAAACTTGGAGGCTCTTTTTCTCTGTTTTCAGCATATTTTGCTCTGCAGAAGAAATATGATCTCATTCTGATTGATTCAAACTTAGTTTAATCATCTTTTTTTACTTTTAGTTTATTAGTATTTTCTTTTTGTCCAGTTCTATTTTATTATCCGAAGTCTATTGTTGCATTTATCTTTATAATGCGGTTTGGATCCCTAATTTTCCTCTATATATCTCTTACTGAAAAGAGATGACTTGTCTTCCTTTCCCTTTGCCACTCGAACAGTTTTATAATATGTTTTTAGAAAACAACTTCTAAAATATTTTGTAGAATAGTCACTTAAAACAGCCTTTCGTTGGGACTGATTGGAAGCTGTTTCTAAAAATGGAAAAGAATAGAAAATAGTTCTATAATATGTTTTTAGAAAATAACTTCTAAAATATTTTGTAGAATAGTCACTTAAACAGTCCTTCATTGGGACTGATTGGAAGCTGTTTCTAAAAACAAAATCTTTTTTTTTGGAATGAAAAAGAGTGAACAGTACAATTTTAAAATTTGGTGGTGTTGGGTTTTTAAATTTAATTTTTAAAATAAATATCAATATTGTTGTAATCGTCACTATGGCCACCATCATTTTGTTTTTTGTTCTTCTATCCCCTGTTTAAGAACAATTATAGCTCTCATTTTGTTCACATTGATCATTTTGAATGGCTATTTTCTGTTGTGCATAGAACCGTAACTCTTATACCAATCGTTCAATGAAATTCTTAGAAGTCCTATCTAATTCCTAAAAGTGATTTGTTCTTATAAAGAAATTATTTTGGGTAATACGGTGTGGGGAGGCATTGTTCTGACAGTAAAAGAGGATGGGGTCTTTAGCATTAACAGGGAGTTGGGGCCTGATGGAAGAGGATGTTGATTGCTGAAGATTGCCAAGTAGGGTGCCAAAGACAAAAGAGGTCTTTTGGGGAAGCTCGAGTTTTATTTCCGTTCTGTAGAGTCCCAAGAGGGTTTTTTCATCGTTTTCTCTTTCTATGTCATTTGTTGTTTTCTCTTGACAAGTTTTTGTGTCTGAGCTGAAATATTATCTTTTTTGTTGTAATTCTCTGTATTTATTTATTTATATTTTATTTTATGCTTAGTGCAGTTTGTATCTTTTAAGCATCAATCTCTATTCATTCATCAATAAAAAGTTTCATTTCTTGTTTAAAAAAATTTAAAATAATAAAGAAGATATTCCAGGAGGTTTAGGGGTATTATCTATTTGCAAGTTTATTTCTAGTGGGGCTGTCTTACAAAAAGGCTGTTTATAGTTTCTTTTTCAATATAGTGGATTTCTTTTTGTTTGTTTCGTTGTAAAAGTTTCTTTCTTGACATTGAAGAAAGTAATATTTCAACACAACCCTGAATATCACAGATTTGCAATATGCATTTGTTGATACCACTTCTCAACAAAGTGTTCCGGGGTTTAGTAAGAGGAAAAGACGATATCACCACATGGCAAAAGATATGCATGCGATTCATGTGAAATTGGATTTCTCTTGTGTATTGTTTGTACTGTCTAATGAATGGAAGTGTTTAGATTTATGAATTTCTGAGGGATCCTGCTTTGATCTTACCGATGTGTTATTTATCATTTTGGATTTCAGTACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTCTTGCACTACGTTCCTGGTGGTTATAATGTTGTAGCCCAAATGATGAATCTTGCTCCTGTTGGTGCTCAACCATCTAGAAATGTAGCTGCCCCACCTTCTGTCACTAATGGCGGGTCCTCTGCCCCATCCCAAGTCAAAACTCGCATGTGCAACAAGTTCAACACTGCTGAAGGCTGCAAGTTTGGTGATAAATGCAATTTTGCCCATGGAGAGTGGGAACTCGGGCGGCCTAATCCTCCATCTCACGATAATCCTCGTGCTATGGGAGGAGGTGGAGGTGGAGGTGGAGTACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCGGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCTGGAGCAATCATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTCTCCATCAGGGACCATGAATCGGATCCAAATCTGAGGAACATCGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATTATCACAGTTTCGATGGCAGGACCGGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGCACCAACAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAGTTACGCAAGTCTGGAGTATGATTAGGTCCCCGATTTTGTCTAGTTTTTATTAAAAAGGAAGTTTTGCATTGAAGCGTTCAATCAACACGGGTGCGGTATTTGTAGTTGGGTTCGGGTTTGGGTTCGAGTTTGGGTTCTTATGTTGTAGCTTTATGAGAGTATCACCTTGGCATTCCTTGATTAGGAGATAATTAAGTTATTAATTCTTATGATTGCTAATCATTTTCATTGCCCATTACATTGCATCATATGTTCACATTATTTACATAATCTGTTTAACAATTGTCTCTTCCAATTCTTATCCAAAAAAGAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAC

mRNA sequence

ATTTATTTATTTATATTTTATTAATATCCTCCGGGCTTCACCGTTCTCCGCCAATTCCCAATCTCTCTCTAATTTTTCTCCATAGCTTTTTTAAAAACCTCAATATCCCTTTATCCACCATAACCCTCCGACACTAGGGTTAGGGTTTTTTCCACTTCTTCTTCTTCTTCTTCTTCTTCTACTACTACTACTTTCCCTTTTCAATTTTTTTTTTCCATTTCCTTCCTTCCTCTAATCTCTGCAACCGTTTGTTCACTCGTTGCTTTTCTTTTTTCGATTTACTTTTCTCGATCTCGATCTGTGCTTCTCTTCAATGGATATGCGCAAGCGAGGGAGGCCCGAAGCTGCCTTCAATTCTAATGGTTCATTTAAGAAGCATAAGCAAGAATTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTCTTGCACTACGTTCCTGGTGGTTATAATGTTGTAGCCCAAATGATGAATCTTGCTCCTGTTGGTGCTCAACCATCTAGAAATGTAGCTGCCCCACCTTCTGTCACTAATGGCGGGTCCTCTGCCCCATCCCAAGTCAAAACTCGCATGTGCAACAAGTTCAACACTGCTGAAGGCTGCAAGTTTGGTGATAAATGCAATTTTGCCCATGGAGAGTGGGAACTCGGGCGGCCTAATCCTCCATCTCACGATAATCCTCGTGCTATGGGAGGAGGTGGAGGTGGAGGTGGAGTACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCGGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCTGGAGCAATCATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTCTCCATCAGGGACCATGAATCGGATCCAAATCTGAGGAACATCGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATTATCACAGTTTCGATGGCAGGACCGGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGCACCAACAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAGTTACGCAAGTCTGGAGTATGATTAGGTCCCCGATTTTGTCTAGTTTTTATTAAAAAGGAAGTTTTGCATTGAAGCGTTCAATCAACACGGGTGCGGTATTTGTAGTTGGGTTCGGGTTTGGGTTCGAGTTTGGGTTCTTATGTTGTAGCTTTATGAGAGTATCACCTTGGCATTCCTTGATTAGGAGATAATTAAGTTATTAATTCTTATGATTGCTAATCATTTTCATTGCCCATTACATTGCATCATATGTTCACATTATTTACATAATCTGTTTAACAATTGTCTCTTCCAATTCTTATCCAAAAAAGAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAC

Coding sequence (CDS)

ATGGATATGCGCAAGCGAGGGAGGCCCGAAGCTGCCTTCAATTCTAATGGTTCATTTAAGAAGCATAAGCAAGAATTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTCTTGCACTACGTTCCTGGTGGTTATAATGTTGTAGCCCAAATGATGAATCTTGCTCCTGTTGGTGCTCAACCATCTAGAAATGTAGCTGCCCCACCTTCTGTCACTAATGGCGGGTCCTCTGCCCCATCCCAAGTCAAAACTCGCATGTGCAACAAGTTCAACACTGCTGAAGGCTGCAAGTTTGGTGATAAATGCAATTTTGCCCATGGAGAGTGGGAACTCGGGCGGCCTAATCCTCCATCTCACGATAATCCTCGTGCTATGGGAGGAGGTGGAGGTGGAGGTGGAGTACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCGGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACCGCAAAGATCAGTATAGATGCCTCACTTGCTGGAGCAATCATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGCCAAACGGGTGCGAAACTCTCCATCAGGGACCATGAATCGGATCCAAATCTGAGGAACATCGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGGGAGCTTATTATCACAGTTTCGATGGCAGGACCGGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGCACCAACAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAGTTACGCAAGTCTGGAGTATGA

Protein sequence

MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV

Homology

[Close]

BLAST of Cmc08g0228631 vs. NCBI nr
Match: XP_008442098.1 (PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo])

HSP 1 Score: 613.6 bits (1581), Expect = 9.1e-172
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300
           VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
Sbjct: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300

Query: 301 KSGV 305
           KSGV
Sbjct: 301 KSGV 304

[Close]

BLAST of Cmc08g0228631 vs. NCBI nr
Match: XP_004146386.1 (zinc finger CCCH domain-containing protein 31 [Cucumis sativus] >KGN54808.1 hypothetical protein Csa_012532 [Cucumis sativus])

HSP 1 Score: 605.5 bits (1560), Expect = 2.5e-169
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRN+AAPPSVTNGG SAPSQVKTRMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAM-GGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRPNPPSHDNPRAM GGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

Query: 301 RKSGV 305
           RKSGV
Sbjct: 301 RKSGV 305

[Close]

BLAST of Cmc08g0228631 vs. NCBI nr
Match: XP_038882544.1 (zinc finger CCCH domain-containing protein 31 [Benincasa hispida])

HSP 1 Score: 582.8 bits (1501), Expect = 1.7e-162
Identity = 290/304 (95.39%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRP+AAFN+NG+FKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPDAAFNTNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVG+QPSRN+ APP VTNGGSSAPSQVK+RMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGSQPSRNMPAPP-VTNGGSSAPSQVKSRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRPNPPSHDNPRAMGGGGGGG  HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGG--HMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHE DPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHELDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300
           VRELIITVSM GPGKA GGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
Sbjct: 241 VRELIITVSMTGPGKAPGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300

Query: 301 KSGV 305
           KSGV
Sbjct: 301 KSGV 301

[Close]

BLAST of Cmc08g0228631 vs. NCBI nr
Match: XP_023545090.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 284/305 (93.11%), Postives = 290/305 (95.08%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP VTNGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VTNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGG       HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPTPPSHDNPRGMGG-------HMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           VRELIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 297

Query: 301 RKSGV 305
           RKSGV
Sbjct: 301 RKSGV 297

[Close]

BLAST of Cmc08g0228631 vs. NCBI nr
Match: XP_022967865.1 (zinc finger CCCH domain-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 564.3 bits (1453), Expect = 6.3e-157
Identity = 283/305 (92.79%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGGG      HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPTPPSHDNPRGMGGG------HMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           VRELIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 298

Query: 301 RKSGV 305
           RKSGV
Sbjct: 301 RKSGV 298

[Close]

BLAST of Cmc08g0228631 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.3e-88
Identity = 186/312 (59.62%), Postives = 213/312 (68.27%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKR RP+ A N   +  K  +E ES  T + SK KPCTKFFST GCPFGE CHF H+VPG
Sbjct: 8   RKRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 64  GYNVVAQMMNLA-PVGAQPSRNVAAPPSVTNGGSSAP-SQVKTRMCNKFNTAEGCKFGDK 123
           GY  VA+ +NL  P    P+R   AP     GG+S P S  KTRMC K+NTAEGCKFGDK
Sbjct: 68  GYQAVAKTLNLGNPAVPAPAR---APMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDK 127

Query: 124 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPG----PAASFGA 183
           C+FAHGE ELG+P   SH++  A   G         GR GGR + PPP     PA +FGA
Sbjct: 128 CHFAHGERELGKPAYMSHESAMAPPMG---------GRYGGRPEPPPPAAMGPPAGNFGA 187

Query: 184 SATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINE 243
           SATAKIS+DASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIELEG F+QI +
Sbjct: 188 SATAKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQ 247

Query: 244 ASAMVRELIITVSMAGPGKASGGMGGGPAPTG-------SNYKTKLCDNFAKGSCTFGER 302
           AS MV ELI T+S + P K   G   G AP G       SNYKTKLC+NF KG+CTFG+R
Sbjct: 248 ASNMVGELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDR 306

[Close]

BLAST of Cmc08g0228631 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.7e-86
Identity = 187/315 (59.37%), Postives = 215/315 (68.25%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKRG+P+ A   NG+  K  +E ES  T VGSKSKPCTKFFST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPDGA---NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPS-----QVKTRMCNKFNTAEGCKF 123
           GY  VA+M NL          +A PP     G++ P       VKTR+CNK+NTAEGCK+
Sbjct: 66  GYQAVAKMTNLG------GPAIAPPPGRMPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKW 125

Query: 124 GDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPP-PGPA----A 183
           GDKC+FAHGE ELG+P       P  MG            R  G    PP P PA    A
Sbjct: 126 GDKCHFAHGERELGKPMLMDSSMPPPMG-----------PRPTGHFAPPPMPSPAMSTPA 185

Query: 184 SFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFE 243
           SFGASATAKIS+DASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NIELEGTF+
Sbjct: 186 SFGASATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFD 245

Query: 244 QINEASAMVRELIITVSMAGP---GKASGG--MGGGPAPTGSNYKTKLCDNFAKGSCTFG 303
           QI  ASAMVRELI+++    P    K  GG   GGGP   GSN+KTKLC+NF KGSCTFG
Sbjct: 246 QIKNASAMVRELIVSIGGGAPPQGKKPVGGSHRGGGP---GSNFKTKLCENFTKGSCTFG 297

[Close]

BLAST of Cmc08g0228631 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.5e-79
Identity = 171/307 (55.70%), Postives = 200/307 (65.15%), Query Frame = 0


Query: 5   KRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGY 64
           KR  PE    +NG+ K+ +    S   VGSK KPCTKFFST+GCPFG SCHFLH  PGGY
Sbjct: 7   KRAAPE---GTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGY 66

Query: 65  NVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAP-----SQVKTRMCNKFNTAEGCKFGD 124
              A+M       +     VAAPP     G  AP     S VKTRMCNK+NTAEGCK+G 
Sbjct: 67  QAAAKMT------SHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGS 126

Query: 125 KCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPP-PG----PAASF 184
           KC+FAHGE ELG+P    +  P  MG                  + PP PG    P ++F
Sbjct: 127 KCHFAHGERELGKPMLLDNSMPHPMG--------------SMPFEAPPMPGPDIVPPSTF 186

Query: 185 GASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQI 244
           GASATAKIS+DASLAG IIGKGG N+K I R TGAKL+IRD+ES+PNL+NIELEGTF+QI
Sbjct: 187 GASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQI 246

Query: 245 NEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAH 302
             ASAMV ELI+ +S   P   + G G      GSN+KTKLC+NF KGSCTFG+RCHFAH
Sbjct: 247 KHASAMVTELIVRISGNAPPAKNPGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAH 290

[Close]

BLAST of Cmc08g0228631 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.3e-75
Identity = 169/307 (55.05%), Postives = 195/307 (63.52%), Query Frame = 0


Query: 1   MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKF 120
           HYVPGGYN  AQM NL P  +Q SRN                                  
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRN---------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
                                     M G GG G     GR  GR D P  GP + FGAS
Sbjct: 121 --------------------------MQGSGGPG-----GRFSGRGD-PGSGPVSIFGAS 180

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
            T+KIS+DASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ IELEGTFEQIN A
Sbjct: 181 -TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVA 239

Query: 241 SAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAA 300
           S MVRELI  +      +  GG  G P P GSNYKTK+CD ++KG+CT+G+RCHFAHG +
Sbjct: 241 SGMVRELIGRLGSVKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCTYGDRCHFAHGES 239

Query: 301 ELRKSGV 305
           ELR+SG+
Sbjct: 301 ELRRSGI 239

[Close]

BLAST of Cmc08g0228631 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.7e-73
Identity = 167/315 (53.02%), Postives = 197/315 (62.54%), Query Frame = 0


Query: 1   MDMRKRGRPEA-AFNSN-GSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSN G +KK KQE+ES ST +GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKF 120
           HYVPGGYN V+QM N+ P   Q SRN                                  
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRN---------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
                                     M G G G      GR  GR +   PG  ++FG S
Sbjct: 121 --------------------------MQGSGNG------GRFSGRGE-SGPGHVSNFGDS 180

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
           ATA+ S+DASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+NI LEGT EQI+EA
Sbjct: 181 ATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEA 240

Query: 241 SAMVRELIITVSMAGPGKASGGMGGG--------PAPTGSNYKTKLCDNFAKGSCTFGER 300
           SAMV++LI  ++ A      GG+GGG        P P GSN+KTK+C+ F+KG+CTFG+R
Sbjct: 241 SAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDR 247

Query: 301 CHFAHGAAELRKSGV 305
           CHFAHG AELRKSG+
Sbjct: 301 CHFAHGEAELRKSGI 247

[Close]

BLAST of Cmc08g0228631 vs. ExPASy TrEMBL
Match: A0A1S3B4W9 (zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103486060 PE=4 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.4e-172
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300
           VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR
Sbjct: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300

Query: 301 KSGV 305
           KSGV
Sbjct: 301 KSGV 304

[Close]

BLAST of Cmc08g0228631 vs. ExPASy TrEMBL
Match: A0A0A0KZ79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.2e-169
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRN+AAPPSVTNGG SAPSQVKTRMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAM-GGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRPNPPSHDNPRAM GGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

Query: 301 RKSGV 305
           RKSGV
Sbjct: 301 RKSGV 305

[Close]

BLAST of Cmc08g0228631 vs. ExPASy TrEMBL
Match: A0A6J1HVM0 (zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111467244 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.1e-157
Identity = 283/305 (92.79%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGGG      HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPTPPSHDNPRGMGGG------HMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           VRELIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 298

Query: 301 RKSGV 305
           RKSGV
Sbjct: 301 RKSGV 298

[Close]

BLAST of Cmc08g0228631 vs. ExPASy TrEMBL
Match: A0A6J1ESD4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111435541 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.8e-157
Identity = 282/305 (92.46%), Postives = 289/305 (94.75%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGG       HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPTPPSHDNPRGMGG-------HMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           VRELIITVSM+GPGK  G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 297

Query: 301 RKSGV 305
           RKSGV
Sbjct: 301 RKSGV 297

[Close]

BLAST of Cmc08g0228631 vs. ExPASy TrEMBL
Match: A0A6J1EBA5 (zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111432553 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.2e-154
Identity = 280/304 (92.11%), Postives = 288/304 (94.74%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVGSKSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120
           PGGYNVVAQMMNL PVG+QPSRN+AAPPSVTNGGSSAPSQVKTRMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGR  PPSHDNPRAMGG       HMVGRMGGRMDLP PGPAASFGASATA
Sbjct: 121 CNFAHGEWELGR--PPSHDNPRAMGG-------HMVGRMGGRMDLPQPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 300
           VRELIITVSMAGPGKA G MGGGPAP+GSNYKTK+CDNFAKGSCTFGERCHFAHGAAELR
Sbjct: 241 VRELIITVSMAGPGKAPGAMGGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELR 294

Query: 301 KSGV 305
           KSGV
Sbjct: 301 KSGV 294

[Close]

BLAST of Cmc08g0228631 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-76
Identity = 169/307 (55.05%), Postives = 195/307 (63.52%), Query Frame = 0


Query: 1   MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKF 120
           HYVPGGYN  AQM NL P  +Q SRN                                  
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRN---------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
                                     M G GG G     GR  GR D P  GP + FGAS
Sbjct: 121 --------------------------MQGSGGPG-----GRFSGRGD-PGSGPVSIFGAS 180

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
            T+KIS+DASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ IELEGTFEQIN A
Sbjct: 181 -TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVA 239

Query: 241 SAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAA 300
           S MVRELI  +      +  GG  G P P GSNYKTK+CD ++KG+CT+G+RCHFAHG +
Sbjct: 241 SGMVRELIGRLGSVKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCTYGDRCHFAHGES 239

Query: 301 ELRKSGV 305
           ELR+SG+
Sbjct: 301 ELRRSGI 239

[Close]

BLAST of Cmc08g0228631 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.9e-74
Identity = 167/315 (53.02%), Postives = 197/315 (62.54%), Query Frame = 0


Query: 1   MDMRKRGRPEA-AFNSN-GSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSN G +KK KQE+ES ST +GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKF 120
           HYVPGGYN V+QM N+ P   Q SRN                                  
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRN---------------------------------- 120

Query: 121 GDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
                                     M G G G      GR  GR +   PG  ++FG S
Sbjct: 121 --------------------------MQGSGNG------GRFSGRGE-SGPGHVSNFGDS 180

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
           ATA+ S+DASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+NI LEGT EQI+EA
Sbjct: 181 ATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEA 240

Query: 241 SAMVRELIITVSMAGPGKASGGMGGG--------PAPTGSNYKTKLCDNFAKGSCTFGER 300
           SAMV++LI  ++ A      GG+GGG        P P GSN+KTK+C+ F+KG+CTFG+R
Sbjct: 241 SAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDR 247

Query: 301 CHFAHGAAELRKSGV 305
           CHFAHG AELRKSG+
Sbjct: 301 CHFAHGEAELRKSGI 247

[Close]

BLAST of Cmc08g0228631 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 44/120 (36.67%), Postives = 56/120 (46.67%), Query Frame = 0


Query: 35  KSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG-AQPSRNVAAPPSVTNG 94
           K + C KF++  GCP+GESC FLH      N  +  ++L P G        +   SV  G
Sbjct: 174 KGRHCKKFYTEEGCPYGESCTFLH-DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGG 233

Query: 95  GSSA---------------------PSQVKTRMCNKFNTAEGCKFGDKCNFAHGEWELGR 133
           GSS+                     PS  KTR+CNK+     C FG KC+FAHG  EL R
Sbjct: 234 GSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292

[Close]

BLAST of Cmc08g0228631 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 47/148 (31.76%), Postives = 65/148 (43.92%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLH----- 63
           R+R RP  A   N +++  ++       +  + K C KF     CP+G+ C+F+H     
Sbjct: 161 RERERPSLAPVVNNNWEDDQK-------IILRMKLCRKFCFGEECPYGDRCNFIHEDLSK 220

Query: 64  ------------YVPGGYNVVAQ----MMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVK 123
                        +  G     Q      NL  V  Q S  V AP  + NGG       K
Sbjct: 221 FREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAP--MNNGGVVKTVYWK 280

Query: 124 TRMCNKFNTAEGCKFGDKCNFAHGEWEL 131
           TR+C KF+    C FGDKC+FAHG+ EL
Sbjct: 281 TRLCMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]

BLAST of Cmc08g0228631 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 158 RMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI-RDH 217
           +M G +    P    SF    T KI I     G IIGKGG   K +  Q+GAK+ + RD 
Sbjct: 115 QMSGTVPSSIPVSYGSF-QGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDM 174

Query: 218 ESDPN--LRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGG 263
           ++DPN   R ++L GT +QI++A  ++ + ++  + AG    SGG GG
Sbjct: 175 DADPNCATRTVDLTGTPDQISKAEQLITD-VLQEAEAGNTAGSGGGGG 220

The following BLAST results are available for this feature:

BLAST of Cmc08g0228631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442098.1	9.1e-172	100.00	PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]	[more]
XP_004146386.1	2.5e-169	98.69	zinc finger CCCH domain-containing protein 31 [Cucumis sativus] >KGN54808.1 hypo...	[more]
XP_038882544.1	1.7e-162	95.39	zinc finger CCCH domain-containing protein 31 [Benincasa hispida]	[more]
XP_023545090.1	1.7e-157	93.11	zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967865.1	6.3e-157	92.79	zinc finger CCCH domain-containing protein 31 [Cucurbita maxima]	[more]

BLAST of Cmc08g0228631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XPK1	1.3e-88	59.62	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q7F8R0	2.7e-86	59.37	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	1.5e-79	55.70	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FG30	6.3e-75	55.05	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7C3	2.7e-73	53.02	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cmc08g0228631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4W9	4.4e-172	100.00	zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KZ79	1.2e-169	98.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1	[more]
A0A6J1HVM0	3.1e-157	92.79	zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ESD4	6.8e-157	92.46	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EBA5	4.2e-154	92.11	zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Cmc08g0228631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06770.1	4.5e-76	55.05	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G12130.1	1.9e-74	53.02	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G32360.1	1.5e-10	36.67	Zinc finger (CCCH-type) family protein	[more]
AT3G19360.1	1.4e-08	31.76	Zinc finger (CCCH-type) family protein	[more]
AT2G25970.1	1.3e-06	37.04	KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 176..246 e-value: 7.3E-13 score: 58.7
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 33..60 e-value: 0.91 score: 16.6 coord: 100..127 e-value: 0.027 score: 23.6 coord: 270..296 e-value: 6.0E-8 score: 42.4
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 102..127 e-value: 2.6E-5 score: 24.0 coord: 271..295 e-value: 1.3E-9 score: 37.7 coord: 35..58 e-value: 1.6E-4 score: 21.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 270..297 score: 16.558243
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 33..61 score: 12.708712
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 100..128 score: 13.713346
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 173..268 e-value: 4.8E-16 score: 60.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 166..247
None	No IPR available	GENE3D	4.10.1000.10		coord: 95..133 e-value: 2.6E-11 score: 44.7 coord: 269..302 e-value: 2.8E-14 score: 54.2
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 9..303
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..303
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 177..241 score: 14.738799
None	No IPR available	CDD	cd00105	KH-I	coord: 179..241 e-value: 1.4182E-15 score: 67.9703
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 180..243 e-value: 4.5E-12 score: 45.6
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 269..300
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 33..59
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 99..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0228631.1	Cmc08g0228631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding