Cmc08g0227891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 21308539 .. 21308949 (+)
RNA-Seq Expression	Cmc08g0227891
Synteny	Cmc08g0227891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGAACTCTTGCCTTAGTGCACGATAAATATTACTGGCCAAAAATGCAAGACGACATTGAGAGTTATGTCAAGACTTGCCTAGTTTGTCAACAAGATAAAGGGGAACAACAACTTCCCGCGGGATTGCTTGAACCCTTGCCGATCGTTGAGAAACCATGGGATAGTGTCACCATGGACTTTATCGTAGCATTACCTAAATCCCATGGCTTTGGAACCATTATGGTGGTCGTGGACAGATTCAGCAAATATGCAACTTTTATACCATGCCCACCAGACGTGAAGGTAGACGAAGCGGCAAGAATGTTCTTTAAGAATGTAGTAGAACTGTGGGGGATACCGAAAAGCATCATCAGTGACCGACACCCACATTTTACTGGGAAATTCTGGCGAGACTGTTCAAATTAA

mRNA sequence

ATGAACCGAACTCTTGCCTTAGTGCACGATAAATATTACTGGCCAAAAATGCAAGACGACATTGAGAGTTATGTCAAGACTTGCCTAGTTTGTCAACAAGATAAAGGGGAACAACAACTTCCCGCGGGATTGCTTGAACCCTTGCCGATCGTTGAGAAACCATGGGATAGTGTCACCATGGACTTTATCGTAGCATTACCTAAATCCCATGGCTTTGGAACCATTATGGTGGTCGTGGACAGATTCAGCAAATATGCAACTTTTATACCATGCCCACCAGACGTGAAGGTAGACGAAGCGGCAAGAATGTTCTTTAAGAATGTAGTAGAACTGTGGGGGATACCGAAAAGCATCATCAGTGACCGACACCCACATTTTACTGGGAAATTCTGGCGAGACTGTTCAAATTAA

Coding sequence (CDS)

ATGAACCGAACTCTTGCCTTAGTGCACGATAAATATTACTGGCCAAAAATGCAAGACGACATTGAGAGTTATGTCAAGACTTGCCTAGTTTGTCAACAAGATAAAGGGGAACAACAACTTCCCGCGGGATTGCTTGAACCCTTGCCGATCGTTGAGAAACCATGGGATAGTGTCACCATGGACTTTATCGTAGCATTACCTAAATCCCATGGCTTTGGAACCATTATGGTGGTCGTGGACAGATTCAGCAAATATGCAACTTTTATACCATGCCCACCAGACGTGAAGGTAGACGAAGCGGCAAGAATGTTCTTTAAGAATGTAGTAGAACTGTGGGGGATACCGAAAAGCATCATCAGTGACCGACACCCACATTTTACTGGGAAATTCTGGCGAGACTGTTCAAATTAA

Protein sequence

MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMDFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISDRHPHFTGKFWRDCSN

Homology

[Close]

BLAST of Cmc08g0227891 vs. NCBI nr
Match: KAA0042139.1 (uncharacterized protein E6C27_scaffold67G006280 [Cucumis melo var. makuwa] >TYK18078.1 uncharacterized protein E5676_scaffold306G004140 [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
           MNRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 76  MNRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 135

Query: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
           DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 136 DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARLFFKNVVKLWGIPKSIIS 195

Query: 121 DRHPHFTGKFWRD 134
           DR P FTGKFWR+
Sbjct: 196 DRDPRFTGKFWRE 208

[Close]

BLAST of Cmc08g0227891 vs. NCBI nr
Match: KAA0040658.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 273.1 bits (697), Expect = 1.3e-69
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
           MNRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 1   MNRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 60

Query: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
           DFIVALPKSHGFGTIMVVVDRFSKYATFIPC PDVKVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCSPDVKVDEAARLFFKNVVKLWGIPKSIIS 120

Query: 121 DRHPHFTGKFWRD 134
           DR P FTGKFWR+
Sbjct: 121 DRDPRFTGKFWRE 133

[Close]

BLAST of Cmc08g0227891 vs. NCBI nr
Match: KAA0065760.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 273.1 bits (697), Expect = 1.3e-69
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1    MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
            MNRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 1136 MNRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 1195

Query: 61   DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
            DFIVALPKSHGFGTIMVVVDRFSKYATFIPC PDVKVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 1196 DFIVALPKSHGFGTIMVVVDRFSKYATFIPCSPDVKVDEAARLFFKNVVKLWGIPKSIIS 1255

Query: 121  DRHPHFTGKFWRD 134
            DR P FTGKFWR+
Sbjct: 1256 DRDPRFTGKFWRE 1268

[Close]

BLAST of Cmc08g0227891 vs. NCBI nr
Match: KAA0050130.1 (uncharacterized protein E6C27_scaffold675G001500 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 124/132 (93.94%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 2   NRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMD 61
           NRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTMD
Sbjct: 505 NRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTMD 564

Query: 62  FIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISD 121
           FIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAAR+FFKNVV+LWGIPKSIISD
Sbjct: 565 FIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARLFFKNVVKLWGIPKSIISD 624

Query: 122 RHPHFTGKFWRD 134
           R P FTG+FWR+
Sbjct: 625 RDPRFTGEFWRE 636

[Close]

BLAST of Cmc08g0227891 vs. NCBI nr
Match: KAA0033203.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 8.5e-69
Identity = 123/133 (92.48%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
           MNRTLALVHDKYYWP+ QDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 507 MNRTLALVHDKYYWPRTQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 566

Query: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
           DFIVALPKSHGFGTIMVVVDRFSKYATFIPC PD+KVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 567 DFIVALPKSHGFGTIMVVVDRFSKYATFIPCSPDIKVDEAARLFFKNVVKLWGIPKSIIS 626

Query: 121 DRHPHFTGKFWRD 134
           DR P FTGKFWR+
Sbjct: 627 DRDPRFTGKFWRE 639

[Close]

BLAST of Cmc08g0227891 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 0


Query: 11   KYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMDFIVALPKSH 70
            ++ W  ++  I+ YV+ C  CQ +K     P G L+P+P  E+PW+S++MDFI ALP+S 
Sbjct: 940  RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS 999

Query: 71   GFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISDRHPHFTGKF 130
            G+  + VVVDRFSK A  +PC   +  ++ ARMF + V+  +G PK II+D    FT + 
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 131  WRD 134
            W+D
Sbjct: 1060 WKD 1062

[Close]

BLAST of Cmc08g0227891 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 0


Query: 11   KYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMDFIVALPKSH 70
            ++ W  ++  I+ YV+ C  CQ +K     P G L+P+P  E+PW+S++MDFI ALP+S 
Sbjct: 940  RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS 999

Query: 71   GFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISDRHPHFTGKF 130
            G+  + VVVDRFSK A  +PC   +  ++ ARMF + V+  +G PK II+D    FT + 
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 131  WRD 134
            W+D
Sbjct: 1060 WKD 1062

[Close]

BLAST of Cmc08g0227891 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 0


Query: 11   KYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMDFIVALPKSH 70
            ++ W  ++  I+ YV+ C  CQ +K     P G L+P+P  E+PW+S++MDFI ALP+S 
Sbjct: 940  RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS 999

Query: 71   GFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISDRHPHFTGKF 130
            G+  + VVVDRFSK A  +PC   +  ++ ARMF + V+  +G PK II+D    FT + 
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 131  WRD 134
            W+D
Sbjct: 1060 WKD 1062

[Close]

BLAST of Cmc08g0227891 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 0


Query: 11   KYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMDFIVALPKSH 70
            ++ W  ++  I+ YV+ C  CQ +K     P G L+P+P  E+PW+S++MDFI ALP+S 
Sbjct: 940  RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS 999

Query: 71   GFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISDRHPHFTGKF 130
            G+  + VVVDRFSK A  +PC   +  ++ ARMF + V+  +G PK II+D    FT + 
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 131  WRD 134
            W+D
Sbjct: 1060 WKD 1062

[Close]

BLAST of Cmc08g0227891 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 0


Query: 11   KYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMDFIVALPKSH 70
            ++ W  ++  I+ YV+ C  CQ +K     P G L+P+P  E+PW+S++MDFI ALP+S 
Sbjct: 940  RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS 999

Query: 71   GFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISDRHPHFTGKF 130
            G+  + VVVDRFSK A  +PC   +  ++ ARMF + V+  +G PK II+D    FT + 
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 131  WRD 134
            W+D
Sbjct: 1060 WKD 1062

[Close]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL
Match: A0A5D3D359 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004140 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.5e-71
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
           MNRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 76  MNRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 135

Query: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
           DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 136 DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARLFFKNVVKLWGIPKSIIS 195

Query: 121 DRHPHFTGKFWRD 134
           DR P FTGKFWR+
Sbjct: 196 DRDPRFTGKFWRE 208

[Close]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 6.3e-70
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1    MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
            MNRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 1136 MNRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 1195

Query: 61   DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
            DFIVALPKSHGFGTIMVVVDRFSKYATFIPC PDVKVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 1196 DFIVALPKSHGFGTIMVVVDRFSKYATFIPCSPDVKVDEAARLFFKNVVKLWGIPKSIIS 1255

Query: 121  DRHPHFTGKFWRD 134
            DR P FTGKFWR+
Sbjct: 1256 DRDPRFTGKFWRE 1268

[Close]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL
Match: A0A5A7TCL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00120 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 6.3e-70
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
           MNRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 1   MNRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 60

Query: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
           DFIVALPKSHGFGTIMVVVDRFSKYATFIPC PDVKVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCSPDVKVDEAARLFFKNVVKLWGIPKSIIS 120

Query: 121 DRHPHFTGKFWRD 134
           DR P FTGKFWR+
Sbjct: 121 DRDPRFTGKFWRE 133

[Close]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL
Match: A0A5A7U4C8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001500 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.3e-70
Identity = 124/132 (93.94%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 2   NRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTMD 61
           NRTLALVHDKYYWP+MQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTMD
Sbjct: 505 NRTLALVHDKYYWPRMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTMD 564

Query: 62  FIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIISD 121
           FIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAAR+FFKNVV+LWGIPKSIISD
Sbjct: 565 FIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARLFFKNVVKLWGIPKSIISD 624

Query: 122 RHPHFTGKFWRD 134
           R P FTG+FWR+
Sbjct: 625 RDPRFTGEFWRE 636

[Close]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL
Match: A0A5A7SS05 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1276G00540 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.1e-69
Identity = 123/133 (92.48%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MNRTLALVHDKYYWPKMQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIVEKPWDSVTM 60
           MNRTLALVHDKYYWP+ QDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPI EKPWDSVTM
Sbjct: 507 MNRTLALVHDKYYWPRTQDDIESYVKTCLVCQQDKGEQQLPAGLLEPLPIAEKPWDSVTM 566

Query: 61  DFIVALPKSHGFGTIMVVVDRFSKYATFIPCPPDVKVDEAARMFFKNVVELWGIPKSIIS 120
           DFIVALPKSHGFGTIMVVVDRFSKYATFIPC PD+KVDEAAR+FFKNVV+LWGIPKSIIS
Sbjct: 567 DFIVALPKSHGFGTIMVVVDRFSKYATFIPCSPDIKVDEAARLFFKNVVKLWGIPKSIIS 626

Query: 121 DRHPHFTGKFWRD 134
           DR P FTGKFWR+
Sbjct: 627 DRDPRFTGKFWRE 639

The following BLAST results are available for this feature:

BLAST of Cmc08g0227891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042139.1	1.5e-70	94.74	uncharacterized protein E6C27_scaffold67G006280 [Cucumis melo var. makuwa] >TYK1...	[more]
KAA0040658.1	1.3e-69	93.98	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0065760.1	1.3e-69	93.98	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050130.1	1.7e-69	93.94	uncharacterized protein E6C27_scaffold675G001500 [Cucumis melo var. makuwa]	[more]
KAA0033203.1	8.5e-69	92.48	polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0227891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.3e-27	42.28	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.3e-27	42.28	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-27	42.28	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.3e-27	42.28	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.3e-27	42.28	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D359	7.5e-71	94.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VEX8	6.3e-70	93.98	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=...	[more]
A0A5A7TCL6	6.3e-70	93.98	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5A7U4C8	8.3e-70	93.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SS05	4.1e-69	92.48	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1276G00540 P...	[more]

BLAST of Cmc08g0227891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 46..136 e-value: 2.9E-18 score: 67.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 2..35 e-value: 1.3E-12 score: 47.5
None	No IPR available	GENE3D	1.10.340.70		coord: 1..35 e-value: 2.2E-10 score: 42.6
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 2..132
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 50..136 score: 10.831395
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 47..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227891.1	Cmc08g0227891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity