Cmc08g0227871 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227871
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Polyprotein
Location	CMiso1.1chr08: 21306917 .. 21307432 (+)
RNA-Seq Expression	Cmc08g0227871
Synteny	Cmc08g0227871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCCGTAGAAACCAAGGAAGCAAAATCTGATGAGCCTCCGGTACCAGACAACATACAGAAGGTCCTTGACGAGTACAAGGACATAATGCCTGCAGAGCTGCCAAAGAAACTTCCCCCAAGAAGGGAAGTAAACCACGAAATTGAACTAGAACCAGGAGCTAAACCACTTGCCATGGCTCCTTATCGGATGGCCCTTCCAGAACTTGAGGAGTTACGAAGACAGTTGAAAGAACTCCTCGATGCCGGATATATACAACCGTCAAAGGCCCCCCATGGTGCTCCAATACTCTTCCAGAAGAAGAAGGACGGTTCGTTGAGACTTTGTATAGACTACAGGGCTCTTAACAAGATCACTATCAAGAACAGGTACCCCATCCCTCTTATTGCTGACCTTTTCGACCAGCTAGGAAATGCCCAATGGTTTAGCAAGATCGATCGGGTATTACCAGGTCAGAATAAAGCAAGGGGACGAAGCAAAGACTGCGTGTGTGACCAGGTATGGTGCTTATGA

mRNA sequence

ATGAAGGCCGTAGAAACCAAGGAAGCAAAATCTGATGAGCCTCCGGTACCAGACAACATACAGAAGGTCCTTGACGAGTACAAGGACATAATGCCTGCAGAGCTGCCAAAGAAACTTCCCCCAAGAAGGGAAGTAAACCACGAAATTGAACTAGAACCAGGAGCTAAACCACTTGCCATGGCTCCTTATCGGATGGCCCTTCCAGAACTTGAGGAGTTACGAAGACAGTTGAAAGAACTCCTCGATGCCGGATATATACAACCGTCAAAGGCCCCCCATGGTGCTCCAATACTCTTCCAGAAGAAGAAGGACGGTTCGTTGAGACTTTGTATAGACTACAGGGCTCTTAACAAGATCACTATCAAGAACAGGTACCCCATCCCTCTTATTGCTGACCTTTTCGACCAGCTAGGAAATGCCCAATGGTTTAGCAAGATCGATCGGGTATTACCAGGTCAGAATAAAGCAAGGGGACGAAGCAAAGACTGCGTGTGTGACCAGGTATGGTGCTTATGA

Coding sequence (CDS)

ATGAAGGCCGTAGAAACCAAGGAAGCAAAATCTGATGAGCCTCCGGTACCAGACAACATACAGAAGGTCCTTGACGAGTACAAGGACATAATGCCTGCAGAGCTGCCAAAGAAACTTCCCCCAAGAAGGGAAGTAAACCACGAAATTGAACTAGAACCAGGAGCTAAACCACTTGCCATGGCTCCTTATCGGATGGCCCTTCCAGAACTTGAGGAGTTACGAAGACAGTTGAAAGAACTCCTCGATGCCGGATATATACAACCGTCAAAGGCCCCCCATGGTGCTCCAATACTCTTCCAGAAGAAGAAGGACGGTTCGTTGAGACTTTGTATAGACTACAGGGCTCTTAACAAGATCACTATCAAGAACAGGTACCCCATCCCTCTTATTGCTGACCTTTTCGACCAGCTAGGAAATGCCCAATGGTTTAGCAAGATCGATCGGGTATTACCAGGTCAGAATAAAGCAAGGGGACGAAGCAAAGACTGCGTGTGTGACCAGGTATGGTGCTTATGA

Protein sequence

MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWFSKIDRVLPGQNKARGRSKDCVCDQVWCL

Homology

[Close]

BLAST of Cmc08g0227871 vs. NCBI nr
Match: TYK02748.1 (uncharacterized protein E5676_scaffold145G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-70
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AM
Sbjct: 546 MKAVETEEAKSDEPPVPNNIQKVLDEYKDIMPAELPQKLPLRREVDHEIELEPGAKPPAM 605

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQKKKDGSLRLCIDYRALNKIT
Sbjct: 606 APYRMAPPELEELRRQLKELLDGGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYRALNKIT 665

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLGNA+WFSKID
Sbjct: 666 IKNRYPIPLIADLFDQLGNARWFSKID 692

[Close]

BLAST of Cmc08g0227871 vs. NCBI nr
Match: KAA0041284.1 (uncharacterized protein E6C27_scaffold128G002760 [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 7.4e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AM
Sbjct: 546 MKAVETEEAKSDEPPVPNNIQKVLDEYKDIMPAELPQKLPLRREVDHEIELEPGAKPPAM 605

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQKKKDGSLRLCIDY ALNKIT
Sbjct: 606 APYRMAPPELEELRRQLKELLDGGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYMALNKIT 665

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLGNA+WFSKID
Sbjct: 666 IKNRYPIPLIADLFDQLGNARWFSKID 692

[Close]

BLAST of Cmc08g0227871 vs. NCBI nr
Match: XP_008442289.1 (PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 7.4e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AM
Sbjct: 546 MKAVETEEAKSDEPPVPNNIQKVLDEYKDIMPAELPQKLPLRREVDHEIELEPGAKPPAM 605

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQKKKDGSLRLCIDY ALNKIT
Sbjct: 606 APYRMAPPELEELRRQLKELLDGGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYMALNKIT 665

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLGNA+WFSKID
Sbjct: 666 IKNRYPIPLIADLFDQLGNARWFSKID 692

[Close]

BLAST of Cmc08g0227871 vs. NCBI nr
Match: XP_008446938.1 (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69
Identity = 132/147 (89.80%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MK +E ++ K DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AM
Sbjct: 584 MKTIEAEKEKPDEPPVPDNIQKVLDEYKDIMPSELPKKLPPRREVDHEIELEPGAKPPAM 643

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQKKKDGSLRLCIDYRALNKIT
Sbjct: 644 APYRMAPPELEELRRQLKELLDAGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYRALNKIT 703

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLG A+WFSKID
Sbjct: 704 IKNRYPIPLIADLFDQLGKARWFSKID 730

[Close]

BLAST of Cmc08g0227871 vs. NCBI nr
Match: KAA0040659.1 (uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MK +E +EAK+DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AM
Sbjct: 584 MKTIEAEEAKTDEPPVPDNIQKVLDEYKDIMPSELPKKLPPRREVDHEIELEPGAKPPAM 643

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQKKKDGSLRL IDYRALNKIT
Sbjct: 644 APYRMAPPELEELRRQLKELLDAGYIQPSKAPYGAPVLFQKKKDGSLRLFIDYRALNKIT 703

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLG A+WFSKID
Sbjct: 704 IKNRYPIPLIADLFDQLGKARWFSKID 730

[Close]

BLAST of Cmc08g0227871 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 5.0e-21
Identity = 48/124 (38.71%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 26  EYKDIMPAELPKKLPPRRE--VNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDA 85
           +Y++I+  +LP +        V H+IE++PGA+   + PY +     +E+ + +++LLD 
Sbjct: 563 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 622

Query: 86  GYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWF 145
            +I PSK+P  +P++   KKDG+ RLC+DYR LNK TI + +P+P I +L  ++GNAQ F
Sbjct: 623 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIF 682

Query: 146 SKID 148
           + +D
Sbjct: 683 TTLD 686

[Close]

BLAST of Cmc08g0227871 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 5.0e-21
Identity = 48/124 (38.71%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 26  EYKDIMPAELPKKLPPRRE--VNHEIELEPGAKPLAMAPYRMALPELEELRRQLKELLDA 85
           +Y++I+  +LP +        V H+IE++PGA+   + PY +     +E+ + +++LLD 
Sbjct: 589 KYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 648

Query: 86  GYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKNRYPIPLIADLFDQLGNAQWF 145
            +I PSK+P  +P++   KKDG+ RLC+DYR LNK TI + +P+P I +L  ++GNAQ F
Sbjct: 649 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIF 708

Query: 146 SKID 148
           + +D
Sbjct: 709 TTLD 712

[Close]

BLAST of Cmc08g0227871 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 13  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELE 72
           EP +PD    +  E+KDI      +KLP P + +  E+EL      L +  Y +   +++
Sbjct: 371 EPELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQ 430

Query: 73  ELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKNRYPIPLIA 132
            +  ++ + L +G I+ SKA +  P++F  KK+G+LR+ +DY+ LNK    N YP+PLI 
Sbjct: 431 AMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 490

Query: 133 DLFDQLGNAQWFSKID 148
            L  ++  +  F+K+D
Sbjct: 491 QLLAKIQGSTIFTKLD 502

[Close]

BLAST of Cmc08g0227871 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 13  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELE 72
           EP +PD    +  E+KDI      +KLP P + +  E+EL      L +  Y +   +++
Sbjct: 371 EPELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQ 430

Query: 73  ELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKNRYPIPLIA 132
            +  ++ + L +G I+ SKA +  P++F  KK+G+LR+ +DY+ LNK    N YP+PLI 
Sbjct: 431 AMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 490

Query: 133 DLFDQLGNAQWFSKID 148
            L  ++  +  F+K+D
Sbjct: 491 QLLAKIQGSTIFTKLD 502

[Close]

BLAST of Cmc08g0227871 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 13  EPPVPDNIQKVLDEYKDIMPAELPKKLP-PRREVNHEIELEPGAKPLAMAPYRMALPELE 72
           EP +PD    +  E+KDI      +KLP P + +  E+EL      L +  Y +   +++
Sbjct: 371 EPELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQ 430

Query: 73  ELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKITIKNRYPIPLIA 132
            +  ++ + L +G I+ SKA +  P++F  KK+G+LR+ +DY+ LNK    N YP+PLI 
Sbjct: 431 AMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 490

Query: 133 DLFDQLGNAQWFSKID 148
            L  ++  +  F+K+D
Sbjct: 491 QLLAKIQGSTIFTKLD 502

[Close]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL
Match: A0A5D3BUU0 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00020 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.2e-71
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AM
Sbjct: 546 MKAVETEEAKSDEPPVPNNIQKVLDEYKDIMPAELPQKLPLRREVDHEIELEPGAKPPAM 605

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQKKKDGSLRLCIDYRALNKIT
Sbjct: 606 APYRMAPPELEELRRQLKELLDGGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYRALNKIT 665

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLGNA+WFSKID
Sbjct: 666 IKNRYPIPLIADLFDQLGNARWFSKID 692

[Close]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL
Match: A0A5A7TCV2 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002760 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.6e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AM
Sbjct: 546 MKAVETEEAKSDEPPVPNNIQKVLDEYKDIMPAELPQKLPLRREVDHEIELEPGAKPPAM 605

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQKKKDGSLRLCIDY ALNKIT
Sbjct: 606 APYRMAPPELEELRRQLKELLDGGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYMALNKIT 665

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLGNA+WFSKID
Sbjct: 666 IKNRYPIPLIADLFDQLGNARWFSKID 692

[Close]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL
Match: A0A1S3B5C5 (uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.6e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MKAVET+EAKSDEPPVP+NIQKVLDEYKDIMPAELP+KLP RREV+HEIELEPGAKP AM
Sbjct: 546 MKAVETEEAKSDEPPVPNNIQKVLDEYKDIMPAELPQKLPLRREVDHEIELEPGAKPPAM 605

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLD GYIQPSKAP+GAP+LFQKKKDGSLRLCIDY ALNKIT
Sbjct: 606 APYRMAPPELEELRRQLKELLDGGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYMALNKIT 665

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLGNA+WFSKID
Sbjct: 666 IKNRYPIPLIADLFDQLGNARWFSKID 692

[Close]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL
Match: A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69
Identity = 133/147 (90.48%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MK +E +EAK+DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AM
Sbjct: 584 MKTIEAEEAKTDEPPVPDNIQKVLDEYKDIMPSELPKKLPPRREVDHEIELEPGAKPPAM 643

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQKKKDGSLRL IDYRALNKIT
Sbjct: 644 APYRMAPPELEELRRQLKELLDAGYIQPSKAPYGAPVLFQKKKDGSLRLFIDYRALNKIT 703

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLG A+WFSKID
Sbjct: 704 IKNRYPIPLIADLFDQLGKARWFSKID 730

[Close]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL
Match: A0A1S3BG92 (uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69
Identity = 132/147 (89.80%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MKAVETKEAKSDEPPVPDNIQKVLDEYKDIMPAELPKKLPPRREVNHEIELEPGAKPLAM 60
           MK +E ++ K DEPPVPDNIQKVLDEYKDIMP+ELPKKLPPRREV+HEIELEPGAKP AM
Sbjct: 584 MKTIEAEKEKPDEPPVPDNIQKVLDEYKDIMPSELPKKLPPRREVDHEIELEPGAKPPAM 643

Query: 61  APYRMALPELEELRRQLKELLDAGYIQPSKAPHGAPILFQKKKDGSLRLCIDYRALNKIT 120
           APYRMA PELEELRRQLKELLDAGYIQPSKAP+GAP+LFQKKKDGSLRLCIDYRALNKIT
Sbjct: 644 APYRMAPPELEELRRQLKELLDAGYIQPSKAPYGAPVLFQKKKDGSLRLCIDYRALNKIT 703

Query: 121 IKNRYPIPLIADLFDQLGNAQWFSKID 148
           IKNRYPIPLIADLFDQLG A+WFSKID
Sbjct: 704 IKNRYPIPLIADLFDQLGKARWFSKID 730

The following BLAST results are available for this feature:

BLAST of Cmc08g0227871 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02748.1	1.5e-70	92.52	uncharacterized protein E5676_scaffold145G00020 [Cucumis melo var. makuwa]	[more]
KAA0041284.1	7.4e-70	91.84	uncharacterized protein E6C27_scaffold128G002760 [Cucumis melo var. makuwa]	[more]
XP_008442289.1	7.4e-70	91.84	PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo]	[more]
XP_008446938.1	2.1e-69	89.80	PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]	[more]
KAA0040659.1	2.1e-69	90.48	uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0227871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	5.0e-21	38.71	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	5.0e-21	38.71	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	1.6e-14	33.09	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.6e-14	33.09	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.6e-14	33.09	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUU0	7.2e-71	92.52	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TCV2	3.6e-70	91.84	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B5C5	3.6e-70	91.84	uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=...	[more]
A0A5A7THC0	1.0e-69	90.48	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BG92	1.0e-69	89.80	uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=...	[more]

BLAST of Cmc08g0227871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 125..147 e-value: 1.6E-38 score: 134.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 45..124 e-value: 1.6E-38 score: 134.1
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 11..147
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 11..147
None	No IPR available	CDD	cd01647	RT_LTR	coord: 84..147 e-value: 1.42481E-28 score: 102.288
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 23..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227871.1	Cmc08g0227871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity