Cmc08g0227481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 20549619 .. 20550644 (+)
RNA-Seq Expression	Cmc08g0227481
Synteny	Cmc08g0227481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTAGTACTATCAGTGCAGAAGTGGCGGCATTATCTCTTAGAAAGAAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTCTATTGGAGCAGAGAGAGGTTCAACCACAGTTCCAAAAGTGGTTAACCAAGCTGTTGGGATATGACTTTGAGATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTGATGCACTTTCAAGAATGGATCACCAGTTGGAATTGAAAGCAATGTCCACAGTAGGAACTGTAGACATGGAAACAGTTACAAAGGAAGTTGCGAAGGATGAAGAACTTCAACTCATAGCACAACAGCTGCAGACTGACCCGTCACTGGAGGGAAAATATTCCTTGCTGAATGGCAAGTTAATGTATAAAGGAAGAGTGGTACTGTCCAAATCCTCTTCACTTATACCCAGCCTCTTACACACCTTTCACGACTCTATATTTGGAGGACATTCAGGGTTTTTGAGGACCTACAAGCGGATGAGTGGTGAGCTGTTTTGGAAGGGTATGAAGACAGATATTAAGAAATATGTCGAACAGTGTGAAATCTGCCAAAGAAATAAAAGTGAAGCAACCAAACCGGCAGGAGTTCTTCAACCATTACCCATACCCGACCGCATATTGGAAGATTGGGCTATGGACTTCATAGAAGGGTTGCCTAAAGCACGGGGTATGAATGTGATTATGGTTGTGGTTGACCGGCTGAGCAAATATGCTTACTTTGTCACCATGAAACGCCCGTTCTCAGCAAAGCAAGTAGCCATAGAATTCATTGATAAGATAGTTCGAAGACATGGCATCCCTAAGTCAATCATATCAGATAGGGATAAAATCTTTCTAAGCAACTTTTGGAAGGAATTATTCTATGCTATGGATACTATTCTTAAACGAAGCACCGCCTTTCATCCTCAAACCGACGGCCAGACAGAAAGGGTCAACCAGTGTTTAGAAACCTACTTAAGATGTTTCTGTAATGAGCAACCGAACAAATGGCATCAGTTCATACCATAG

mRNA sequence

ATGGCTGTAGTACTATCAGTGCAGAAGTGGCGGCATTATCTCTTAGAAAGAAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTCTATTGGAGCAGAGAGAGGTTCAACCACAGTTCCAAAAGTGGTTAACCAAGCTGTTGGGATATGACTTTGAGATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTGATGCACTTTCAAGAATGGATCACCAGTTGGAATTGAAAGCAATGTCCACAGTAGGAACTGTAGACATGGAAACAGTTACAAAGGAAGTTGCGAAGGATGAAGAACTTCAACTCATAGCACAACAGCTGCAGACTGACCCGTCACTGGAGGGAAAATATTCCTTGCTGAATGGCAAGTTAATGTATAAAGGAAGAGTGGTACTGTCCAAATCCTCTTCACTTATACCCAGCCTCTTACACACCTTTCACGACTCTATATTTGGAGGACATTCAGGGTTTTTGAGGACCTACAAGCGGATGAGTGGTGAGCTGTTTTGGAAGGGTATGAAGACAGATATTAAGAAATATGTCGAACAGTGTGAAATCTGCCAAAGAAATAAAAGTGAAGCAACCAAACCGGCAGGAGTTCTTCAACCATTACCCATACCCGACCGCATATTGGAAGATTGGGCTATGGACTTCATAGAAGGGTTGCCTAAAGCACGGGGTATGAATGTGATTATGGTTGTGGTTGACCGGCTGAGCAAATATGCTTACTTTGTCACCATGAAACGCCCGTTCTCAGCAAAGCAAGTAGCCATAGAATTCATTGATAAGATAGTTCGAAGACATGGCATCCCTAAGTCAATCATATCAGATAGGGATAAAATCTTTCTAAGCAACTTTTGGAAGGAATTATTCTATGCTATGGATACTATTCTTAAACGAAGCACCGCCTTTCATCCTCAAACCGACGGCCAGACAGAAAGGGTCAACCAGTGTTTAGAAACCTACTTAAGATGTTTCTGTAATGAGCAACCGAACAAATGGCATCAGTTCATACCATAG

Coding sequence (CDS)

ATGGCTGTAGTACTATCAGTGCAGAAGTGGCGGCATTATCTCTTAGAAAGAAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTCTATTGGAGCAGAGAGAGGTTCAACCACAGTTCCAAAAGTGGTTAACCAAGCTGTTGGGATATGACTTTGAGATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTGATGCACTTTCAAGAATGGATCACCAGTTGGAATTGAAAGCAATGTCCACAGTAGGAACTGTAGACATGGAAACAGTTACAAAGGAAGTTGCGAAGGATGAAGAACTTCAACTCATAGCACAACAGCTGCAGACTGACCCGTCACTGGAGGGAAAATATTCCTTGCTGAATGGCAAGTTAATGTATAAAGGAAGAGTGGTACTGTCCAAATCCTCTTCACTTATACCCAGCCTCTTACACACCTTTCACGACTCTATATTTGGAGGACATTCAGGGTTTTTGAGGACCTACAAGCGGATGAGTGGTGAGCTGTTTTGGAAGGGTATGAAGACAGATATTAAGAAATATGTCGAACAGTGTGAAATCTGCCAAAGAAATAAAAGTGAAGCAACCAAACCGGCAGGAGTTCTTCAACCATTACCCATACCCGACCGCATATTGGAAGATTGGGCTATGGACTTCATAGAAGGGTTGCCTAAAGCACGGGGTATGAATGTGATTATGGTTGTGGTTGACCGGCTGAGCAAATATGCTTACTTTGTCACCATGAAACGCCCGTTCTCAGCAAAGCAAGTAGCCATAGAATTCATTGATAAGATAGTTCGAAGACATGGCATCCCTAAGTCAATCATATCAGATAGGGATAAAATCTTTCTAAGCAACTTTTGGAAGGAATTATTCTATGCTATGGATACTATTCTTAAACGAAGCACCGCCTTTCATCCTCAAACCGACGGCCAGACAGAAAGGGTCAACCAGTGTTTAGAAACCTACTTAAGATGTTTCTGTAATGAGCAACCGAACAAATGGCATCAGTTCATACCATAG

Protein sequence

MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYSLLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRLSKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Homology

[Close]

BLAST of Cmc08g0227481 vs. NCBI nr
Match: TYK28064.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 653.7 bits (1685), Expect = 8.9e-184
Identity = 325/341 (95.31%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 1   MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
           MAVVLS+QKW+HYLL RRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 389 MAVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 448

Query: 61  LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
           LQNKA DALSRMDHQL LKAMST   V+METVTKEV KDEELQLIAQQLQTDPSLEGKYS
Sbjct: 449 LQNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYS 508

Query: 121 LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK
Sbjct: 509 WLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 568

Query: 181 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
           KYVEQCEICQRNKSEATKPAGV QPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 569 KYVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 628

Query: 241 SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
           SKYAYFVTMK PFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL
Sbjct: 629 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 688

Query: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
           KRSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 689 KRSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 729

[Close]

BLAST of Cmc08g0227481 vs. NCBI nr
Match: KAA0063362.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 653.7 bits (1685), Expect = 8.9e-184
Identity = 325/341 (95.31%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 1   MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
           MAVVLS+QKW+HYLL RRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 389 MAVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 448

Query: 61  LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
           LQNKA DALSRMDHQL LKAMST   V+METVTKEV KDEELQLIAQQLQTDPSLEGKYS
Sbjct: 449 LQNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYS 508

Query: 121 LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK
Sbjct: 509 WLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 568

Query: 181 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
           KYVEQCEICQRNKSEATKPAGV QPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 569 KYVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 628

Query: 241 SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
           SKYAYFVTMK PFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL
Sbjct: 629 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 688

Query: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
           KRSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 689 KRSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 729

[Close]

BLAST of Cmc08g0227481 vs. NCBI nr
Match: KAA0056659.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 647.5 bits (1669), Expect = 6.4e-182
Identity = 319/341 (93.55%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            MAVVLSVQKWRHYLL RRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 910  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 969

Query: 61   LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
            LQNKAADALSRMDH +ELKA+ST G VDME VTKEV KDEELQL+ QQLQT+P+LEGKYS
Sbjct: 970  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLTQQLQTNPALEGKYS 1029

Query: 121  LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            L NG LMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1030 LTNGTLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKEDIK 1089

Query: 181  KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
            KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 1090 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1149

Query: 241  SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMK PFSAKQVAIEFIDKIVRRH IPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1150 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHDIPKSIISDRDKIFVSNFWKELFYAMDTIL 1209

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
            KRSTA HPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 1210 KRSTAVHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 1250

[Close]

BLAST of Cmc08g0227481 vs. NCBI nr
Match: KAA0046359.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 647.5 bits (1669), Expect = 6.4e-182
Identity = 317/341 (92.96%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            MAVVLSVQKWRHYLL RRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLRRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
            LQNKAADALSRMDH +ELKA+ST G VDME VTKEV KDEELQL+ QQLQT+P+LEGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            L NG LMYKGRVVLSKSSS+IPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
            KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDW MDFIEGLPK  GMNVIMVVVDRL
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKVGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMK PFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 1274

[Close]

BLAST of Cmc08g0227481 vs. NCBI nr
Match: KAA0059481.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 317/341 (92.96%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            MAVVLSVQKWRHYLL RRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
            LQNKAADALSRMDH +ELKA+ST G VDME VTKEV KDEELQL+ QQLQT+P+LEGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            L NG LMYKGRVVLSKSSS+IPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
            KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMK PFSAKQV +EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVTMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 1274

[Close]

BLAST of Cmc08g0227481 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-49
Identity = 119/354 (33.62%), Postives = 181/354 (51.13%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLE--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 60
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 61   YQPGLQNKAADALSRMDHQLE-------------LKAMSTVGTVDMETVTKEVAKDEELQ 120
            Y+PG  N  ADALSR+  + E             +  +S       + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 121  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRT 180
            L+  +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 181  YKRMSGELFWKGMKTDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIE 240
               +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 241  GLPKARGMNVIMVVVDRLSKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDK 300
             LP++ G N + VVVDR SK A  V   +  +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 301  IFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKW 337
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1107

[Close]

BLAST of Cmc08g0227481 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-49
Identity = 119/354 (33.62%), Postives = 181/354 (51.13%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLE--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 60
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 61   YQPGLQNKAADALSRMDHQLE-------------LKAMSTVGTVDMETVTKEVAKDEELQ 120
            Y+PG  N  ADALSR+  + E             +  +S       + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 121  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRT 180
            L+  +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 181  YKRMSGELFWKGMKTDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIE 240
               +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 241  GLPKARGMNVIMVVVDRLSKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDK 300
             LP++ G N + VVVDR SK A  V   +  +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 301  IFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKW 337
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1107

[Close]

BLAST of Cmc08g0227481 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-49
Identity = 119/354 (33.62%), Postives = 181/354 (51.13%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLE--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 60
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 61   YQPGLQNKAADALSRMDHQLE-------------LKAMSTVGTVDMETVTKEVAKDEELQ 120
            Y+PG  N  ADALSR+  + E             +  +S       + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 121  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRT 180
            L+  +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 181  YKRMSGELFWKGMKTDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIE 240
               +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 241  GLPKARGMNVIMVVVDRLSKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDK 300
             LP++ G N + VVVDR SK A  V   +  +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 301  IFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKW 337
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1107

[Close]

BLAST of Cmc08g0227481 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-49
Identity = 119/354 (33.62%), Postives = 181/354 (51.13%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLE--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 60
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 61   YQPGLQNKAADALSRMDHQLE-------------LKAMSTVGTVDMETVTKEVAKDEELQ 120
            Y+PG  N  ADALSR+  + E             +  +S       + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 121  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRT 180
            L+  +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 181  YKRMSGELFWKGMKTDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIE 240
               +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 241  GLPKARGMNVIMVVVDRLSKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDK 300
             LP++ G N + VVVDR SK A  V   +  +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 301  IFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKW 337
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1107

[Close]

BLAST of Cmc08g0227481 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-49
Identity = 119/354 (33.62%), Postives = 181/354 (51.13%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLE--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 60
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 61   YQPGLQNKAADALSRMDHQLE-------------LKAMSTVGTVDMETVTKEVAKDEELQ 120
            Y+PG  N  ADALSR+  + E             +  +S       + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 121  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRT 180
            L+  +   D  +E    L +G L+  K +++L   + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 181  YKRMSGELFWKGMKTDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIE 240
               +     WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 241  GLPKARGMNVIMVVVDRLSKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDK 300
             LP++ G N + VVVDR SK A  V   +  +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 301  IFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKW 337
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1107

[Close]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL
Match: A0A5A7V529 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00350 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.3e-184
Identity = 325/341 (95.31%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 1   MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
           MAVVLS+QKW+HYLL RRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 389 MAVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 448

Query: 61  LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
           LQNKA DALSRMDHQL LKAMST   V+METVTKEV KDEELQLIAQQLQTDPSLEGKYS
Sbjct: 449 LQNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYS 508

Query: 121 LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK
Sbjct: 509 WLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 568

Query: 181 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
           KYVEQCEICQRNKSEATKPAGV QPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 569 KYVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 628

Query: 241 SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
           SKYAYFVTMK PFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL
Sbjct: 629 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 688

Query: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
           KRSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 689 KRSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 729

[Close]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL
Match: A0A5D3DX13 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003250 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.3e-184
Identity = 325/341 (95.31%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 1   MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
           MAVVLS+QKW+HYLL RRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 389 MAVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 448

Query: 61  LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
           LQNKA DALSRMDHQL LKAMST   V+METVTKEV KDEELQLIAQQLQTDPSLEGKYS
Sbjct: 449 LQNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYS 508

Query: 121 LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK
Sbjct: 509 WLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 568

Query: 181 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
           KYVEQCEICQRNKSEATKPAGV QPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 569 KYVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 628

Query: 241 SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
           SKYAYFVTMK PFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL
Sbjct: 629 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 688

Query: 301 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
           KRSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 689 KRSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 729

[Close]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL
Match: A0A5A7TYN3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00710 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.1e-182
Identity = 317/341 (92.96%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            MAVVLSVQKWRHYLL RRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLRRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
            LQNKAADALSRMDH +ELKA+ST G VDME VTKEV KDEELQL+ QQLQT+P+LEGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            L NG LMYKGRVVLSKSSS+IPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
            KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDW MDFIEGLPK  GMNVIMVVVDRL
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKVGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMK PFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 1274

[Close]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL
Match: A0A5A7UT21 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001910 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.1e-182
Identity = 319/341 (93.55%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            MAVVLSVQKWRHYLL RRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 910  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 969

Query: 61   LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
            LQNKAADALSRMDH +ELKA+ST G VDME VTKEV KDEELQL+ QQLQT+P+LEGKYS
Sbjct: 970  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLTQQLQTNPALEGKYS 1029

Query: 121  LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            L NG LMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1030 LTNGTLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKEDIK 1089

Query: 181  KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
            KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 1090 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1149

Query: 241  SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMK PFSAKQVAIEFIDKIVRRH IPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1150 SKYAYFVTMKHPFSAKQVAIEFIDKIVRRHDIPKSIISDRDKIFVSNFWKELFYAMDTIL 1209

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
            KRSTA HPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 1210 KRSTAVHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 1250

[Close]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL
Match: A0A5A7V194 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002120 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 5.3e-182
Identity = 317/341 (92.96%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 1    MAVVLSVQKWRHYLLERRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 60
            MAVVLSVQKWRHYLL RRFTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG
Sbjct: 934  MAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 993

Query: 61   LQNKAADALSRMDHQLELKAMSTVGTVDMETVTKEVAKDEELQLIAQQLQTDPSLEGKYS 120
            LQNKAADALSRMDH +ELKA+ST G VDME VTKEV KDEELQL+ QQLQT+P+LEGKYS
Sbjct: 994  LQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYS 1053

Query: 121  LLNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 180
            L NG LMYKGRVVLSKSSS+IPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK
Sbjct: 1054 LTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIK 1113

Query: 181  KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWAMDFIEGLPKARGMNVIMVVVDRL 240
            KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDW MDFIEGLPKA GMNVIMVVVDRL
Sbjct: 1114 KYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRL 1173

Query: 241  SKYAYFVTMKRPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTIL 300
            SKYAYFVTMK PFSAKQV +EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTIL
Sbjct: 1174 SKYAYFVTMKHPFSAKQVTMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTIL 1233

Query: 301  KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 342
            KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Sbjct: 1234 KRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP 1274

The following BLAST results are available for this feature:

BLAST of Cmc08g0227481 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28064.1	8.9e-184	95.31	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0063362.1	8.9e-184	95.31	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0056659.1	6.4e-182	93.55	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046359.1	6.4e-182	92.96	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0059481.1	1.1e-181	92.96	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0227481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	6.7e-49	33.62	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	6.7e-49	33.62	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	6.7e-49	33.62	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	6.7e-49	33.62	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	6.7e-49	33.62	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V529	4.3e-184	95.31	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DX13	4.3e-184	95.31	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TYN3	3.1e-182	92.96	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UT21	3.1e-182	93.55	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7V194	5.3e-182	92.96	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc08g0227481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 1..51 e-value: 1.5E-10 score: 41.3
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 138..194 e-value: 4.4E-19 score: 68.3
None	No IPR available	GENE3D	1.10.340.70		coord: 103..193 e-value: 6.0E-17 score: 63.7
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 16..340
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 1..72 e-value: 9.83513E-29 score: 105.652
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 202..341 e-value: 7.5E-36 score: 125.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 203..341 score: 18.854795
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 205..340
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227481.1	Cmc08g0227481.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003676	nucleic acid binding