Cmc08g0227401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	54S ribosomal protein L37, mitochondrial-like
Location	CMiso1.1chr08: 20457072 .. 20460778 (+)
RNA-Seq Expression	Cmc08g0227401
Synteny	Cmc08g0227401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCCCTTTCCTTAAGCCCACTACCAAGTACCAGCCACCTTCATCTCCATTCCCCATCCCTCCATCTCTTTCATCTCGCATTTCTCCTCTCGCATATCCTCTTTTGTTCCCTTTTCTTCCATCTCTTCGATCTCCACCGCCACGCCGGCCAATATCAATCATCTCCTCTTCTTCCATTTCTCAGGACACTTCCCAATATCAATCCTTCCCAACATCAATCCCAAATCAAACTAGCACAAGGCATGAACTTGAAGAAATGAAAAATTGAAAGACCATAAAATTTCAATCTTACGAACTTGAAGAGGAAAGGGGAAAAACTCTAGCAGGCGTAGGAGAGCTGACTACGGAGGCAGGCGAGAGGTTAGTATTGACGCACGATGCTGGAAGTTTGAAAAATTTACTGAAATTAGGGCTGGGTATAGTCTTATTAGGGAAATTATAATGAATCAGAATAGGTTGGGGTTTCATTTGTGCCAATTTATTGTATAGAATGAATTTTCTTTTCTTAGGCTCAAACCATGAATTTAGGGCTTTGAGAAAGAAAGATATAATTTGAGTTGAATATTGAAAGTTCTCTAGAACTGGATTAAGCGTGATCCAATTTGTAATACAAAAATTCTTACATTCCCAAAGTTAAGGAAATAAAAAGAAAACAACTTCGATCAAATACCAAAAAATTAAGGGAAAAAAAAAAAAGAAAACCGATTTCGAAACTGAGCTTATATTCGATTCGGTTCGAGCTGCACAACGGTGCGGTTTGGTTTTGCATACAATTTCTTTTTTAATTTTCAGTTCGGTTTGGGAAACCGTGTCCACCCCTATCGATTGGGGTCGCTGGCTGTGGATCCTGCTTTTGTACGGGTGTTGGGGGAAATGGGAACGCTGGGTAGTATTTAAGGATCTTTTGTGTTAGAATTAGTTATCTTGAATTTTGTGATAGAACTGTAGTTCTTGGGAGGAGAGAGTTAGAGACCACTCCTCTTATTTGGCTGGGTTTAGTGTGCTCTTTTGTTAGTTATTTTCTATCAAAAACATTCCCCTGTTCTGTTCATTTGTGTTCTTTTATTAGTTGTGTTGGCTGTTGCCTTGCAGTTTGGAAAACACTTTGGCACCAAATAGTTCGTCGAGTAATTTATCCACAATTGGAATTGGGTACTTGTTAGGAATAATGGGCTTGATTAAAACCCCTACAATCTCAACACCAGCTTCATCTTTCTTTCACGAATTAAAATTTTGATCTCATCTTGGCTTGGTTAAAATCCTTACTTGGCTGGATTGTACTAGTTAATTAACATTTCACGAATTAAGCTTGTGATCTAATCTTTTGGAAATTGAGGATGTCTGAAGCATTCTCCGGACCAGTTGTTCAATTGTATGGTCACAACTCCTACATGTTTGCAGTTTCCTTGGTTTTGAATATCATCGCATGCTGTTGGACAACTGTAATATATTGTTGGTCACATTTTCAATGGTGCTTGTTCAAATGCCCTGTGGGGTAAGTTTGAATTTGCCGCTTCTACCACTACACCAATATATTTATCTCACTTCTGTGTTAGGAATCTGTCGGTGAGGGAGATTCTCCAAAATCAAACTAGGTGTACATTAGAGGGATTGGATGTCTAAGCAGTAAGCGATGCTTGTTGAATTATCTGATTGAAACATACCTACCGTTCTATGTTTCTAAAGACGGATTTTTCCTTATTGTATAAACTAGAATAAATACTAGTCTTCATTTGTAAACAAGCAGGTTCTTAATAATTAAAATTTTGTTTGCTCTTTGTTTGCACCCCATATTGTTTAATCATCATTTGATCCTAGTTTTATCTGTGAAAGTAGGAACTTCATCGCATACCAAGTTGGCCGGTGAATTATTTCATCAGAATTAATAATTCTGAAAGTTTGTTTCTGTTTTGCAGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTGCGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAACAATATAGTAGAGGCAGACTTTGTTTTTGTTTCTTTTGTGAATGTAATGCAACTCTTTATCAAACTTTGTATCAATGTGCAAGTCCCGACTTGCATTCTCTCCCTTTTAGTTACTGTCTGTTTTCCAAGTCCATTTTAATGTACTAATTTCAGATGAAATTCGACAAGTTCGGCTTAATTTGAAAGCCAATCTTGTTATATTTCTTTTGCTTTTGCAGTAAAAATGAGAGTTGGAGAGTTAAGTCAATCTTGTTATATTCCACTTGAATGCATGAATGTCCCCTTTGAGCAAATTTATGAAAATAGAATCTGAAAGATTTTTTTTTTTAATTTTTTTTTAAACAACACAGTTTACATGGAAATCAACACCTTTGAAGCTTCATATTTGAAATTGAACAAGTTCCATACGTTTACCCTTACTTTATATGTTTCACCGATGATATTTTCACCGATTATCAAAAATTACATTAACATAATTCTCAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTAAGATAATTCTCATAAGCAAAATTAAGAAGAGTGAGTGTGTTCGTGATTCTAAGGAGCTCTACACAATGGGCAAGAGTTGTTGATTTGAAGCCATGTAAGGACGCATGATTTGTGATACACATGACCACATGGAATCCTACTCACCTCCTTCCCCTTTCCTTTTAGCTCTTCATAACAAACACTGCAATCTCCGATTTCTTCTTCTTCTTCTTCTTTATTAAACCCATCAAATTTCTGCTTCATTATTAATCTCTCAATCGCAGACTCCGGCGCCCCTCTTGTCCTTGGGGGTGGAGTTTCTTGAAATCCTTGCTCTCCGATGATCAAGTCCTCCACATGATCGATGTTGGCTTCAATTTTGAAGCTCGGAAGAATGGCACGAAACTGTAAAGCAAAGGAGAGAATCTCGTGACAAATGGTTCGGCGAACAGAGGAATGTAGGTTGAAGGAACACAGAAACTGATTAACCAAAAATTGAATTGATTGTTGTTGTCGAGGATGGCGGAGATTAGAAAAAGGAATCAAAGTGTCCCCCATGAGGGTTGAGGGAGTCTGTTGAATTATTTGATCTGAAATGACGAGACGGCTGGAATACCGAAATCGAACAATGAGGAATTGATGGGTGGTTTGGAGAGGCGGAAAGAGAACAATGAAAGGAAGAAGAAGTACAGAGAGACATGATGATGCAGGTAAAAGAGTGGAATGGAATGGAATTGATTGGGGGAAACAGAGTTTTTGATTCACCAACGGCTATCATCCCAACGGCTCTTTTTTCTTTCTTGGGAGTCAAGTTTTGGTAAGGGCTGTTTTCCTCCGCATTGCGTCCATCCTCCTCCGTCCCCCACACCATT

mRNA sequence

GTTGCCCTTTCCTTAAGCCCACTACCAAGTACCAGCCACCTTCATCTCCATTCCCCATCCCTCCATCTCTTTCATCTCGCATTTCTCCTCTCGCATATCCTCTTTTGTTCCCTTTTCTTCCATCTCTTCGATCTCCACCGCCACGCCGGCCAATATCAATCATCTCCTCTTCTTCCATTTCTCAGGACACTTCCCAATATCAATCCTTCCCAACATCAATCCCAAATCAAACTAGCACAAGGCATGAACTTGAAGAAATGAAAAATTGAAAGACCATAAAATTTCAATCTTACGAACTTGAAGAGGAAAGGGGAAAAACTCTAGCAGGCGTAGGAGAGCTGACTACGGAGGCAGGCGAGAGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTGCGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAACAATATAGTAGAGGCAGACTTTGTTTTTGTTTCTTTTGTGAATGTAATGCAACTCTTTATCAAACTTTGTATCAATGTGCAAGTCCCGACTTGCATTCTCTCCCTTTTAGTTACTGTCTGTTTTCCAAGTCCATTTTAATGTACTAATTTCAGATGAAATTCGACAAGTTCGGCTTAATTTGAAAGCCAATCTTGTTATATTTCTTTTGCTTTTGCAGTAAAAATGAGAGTTGGAGAGTTAAGTCAATCTTGTTATATTCCACTTGAATGCATGAATGTCCCCTTTGAGCAAATTTATGAAAATAGAATCTGAAAGATTTTTTTTTTTAATTTTTTTTTAAACAACACAGTTTACATGGAAATCAACACCTTTGAAGCTTCATATTTGAAATTGAACAAGTTCCATACGTTTACCCTTACTTTATATGTTTCACCGATGATATTTTCACCGATTATCAAAAATTACATTAACATAATTCTCAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTAAGATAATTCTCATAAGCAAAATTAAGAAGAGTGAGTGTGTTCGTGATTCTAAGGAGCTCTACACAATGGGCAAGAGTTGTTGATTTGAAGCCATGTAAGGACGCATGATTTGTGATACACATGACCACATGGAATCCTACTCACCTCCTTCCCCTTTCCTTTTAGCTCTTCATAACAAACACTGCAATCTCCGATTTCTTCTTCTTCTTCTTCTTTATTAAACCCATCAAATTTCTGCTTCATTATTAATCTCTCAATCGCAGACTCCGGCGCCCCTCTTGTCCTTGGGGGTGGAGTTTCTTGAAATCCTTGCTCTCCGATGATCAAGTCCTCCACATGATCGATGTTGGCTTCAATTTTGAAGCTCGGAAGAATGGCACGAAACTGTAAAGCAAAGGAGAGAATCTCGTGACAAATGGTTCGGCGAACAGAGGAATGTAGGTTGAAGGAACACAGAAACTGATTAACCAAAAATTGAATTGATTGTTGTTGTCGAGGATGGCGGAGATTAGAAAAAGGAATCAAAGTGTCCCCCATGAGGGTTGAGGGAGTCTGTTGAATTATTTGATCTGAAATGACGAGACGGCTGGAATACCGAAATCGAACAATGAGGAATTGATGGGTGGTTTGGAGAGGCGGAAAGAGAACAATGAAAGGAAGAAGAAGTACAGAGAGACATGATGATGCAGGTAAAAGAGTGGAATGGAATGGAATTGATTGGGGGAAACAGAGTTTTTGATTCACCAACGGCTATCATCCCAACGGCTCTTTTTTCTTTCTTGGGAGTCAAGTTTTGGTAAGGGCTGTTTTCCTCCGCATTGCGTCCATCCTCCTCCGTCCCCCACACCATT

Coding sequence (CDS)

ATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTGCGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAA

Protein sequence

MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

Homology

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BLAST of Cmc08g0227401 vs. NCBI nr
Match: XP_008442187.1 (PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 121 RARIKENNSIKAK 134
           RARIKENNSIKAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]

BLAST of Cmc08g0227401 vs. NCBI nr
Match: XP_016899597.1 (PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo] >KAA0041217.1 39S ribosomal protein L54 [Cucumis melo var. makuwa] >TYK16020.1 39S ribosomal protein L54 [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RARIKENNSIKAK 134
           RARIKENNSIKAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]

BLAST of Cmc08g0227401 vs. NCBI nr
Match: KAE8649745.1 (hypothetical protein Csa_012025 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 123/131 (93.89%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 3   LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 62
           +SQIR FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV
Sbjct: 98  MSQIRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 157

Query: 63  VGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRA 122
           VGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRKNAESLPYADL+RF+KLDTRA
Sbjct: 158 VGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRA 217

Query: 123 RIKENNSIKAK 134
           RIKENNSIKAK
Sbjct: 218 RIKENNSIKAK 228

[Close]

BLAST of Cmc08g0227401 vs. NCBI nr
Match: XP_004144674.3 (39S ribosomal protein L54, mitochondrial [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 123/131 (93.89%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 3   LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 62
           +SQIR FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV
Sbjct: 1   MSQIRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 60

Query: 63  VGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRA 122
           VGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRKNAESLPYADL+RF+KLDTRA
Sbjct: 61  VGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRA 120

Query: 123 RIKENNSIKAK 134
           RIKENNSIKAK
Sbjct: 121 RIKENNSIKAK 131

[Close]

BLAST of Cmc08g0227401 vs. NCBI nr
Match: XP_038883607.1 (54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_038883608.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 8.0e-56
Identity = 118/133 (88.72%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+ IV+SKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKAS LSKEVKST
Sbjct: 1   MVMSQIRLFRRS-IVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASTLSKEVKST 60

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPKIMADSEYP WLWHLLDKHPPLSELRRKN E+LPY DL+RFVKLDT
Sbjct: 61  TVVGANILKEGADPKIMADSEYPVWLWHLLDKHPPLSELRRKNVETLPYVDLKRFVKLDT 120

Query: 121 RARIKENNSIKAK 134
           RA+IKENNS KAK
Sbjct: 121 RAKIKENNSTKAK 132

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BLAST of Cmc08g0227401 vs. ExPASy Swiss-Prot
Match: Q9CPW3 (39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-05
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 37  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPAWLWHLLDKHP 96
           KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+  ++  P
Sbjct: 42  KGGKGGVAAEALKDPEVCTDPTQLTTHAMGVNIYKEGQDVALKADSEYPTWLFQ-VNLGP 101

Query: 97  PLSELRRKNAESLPYADLRRFVKLDTRARIKENNSI 131
           P  +L     ES  Y  L R   +    R+ +N  +
Sbjct: 102 P-KKLEELEPESREYWRLLRKQNIWRHNRLSKNKKL 135

[Close]

BLAST of Cmc08g0227401 vs. ExPASy TrEMBL
Match: A0A5D3CXE8 (39S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00130 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RARIKENNSIKAK 134
           RARIKENNSIKAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]

BLAST of Cmc08g0227401 vs. ExPASy TrEMBL
Match: A0A1S3B544 (54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 121 RARIKENNSIKAK 134
           RARIKENNSIKAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]

BLAST of Cmc08g0227401 vs. ExPASy TrEMBL
Match: A0A1S4DUD4 (39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RARIKENNSIKAK 134
           RARIKENNSIKAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]

BLAST of Cmc08g0227401 vs. ExPASy TrEMBL
Match: A0A0A0KYS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539610 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.3e-59
Identity = 122/131 (93.13%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 3   LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 62
           +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV
Sbjct: 1   MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 60

Query: 63  VGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRA 122
           VGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRKNAESLPYADL+RF+KLDTRA
Sbjct: 61  VGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRA 120

Query: 123 RIKENNSIKAK 134
           RIKENNSIKAK
Sbjct: 121 RIKENNSIKAK 131

[Close]

BLAST of Cmc08g0227401 vs. ExPASy TrEMBL
Match: A0A6J1JQ61 (54S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111486735 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-49
Identity = 107/133 (80.45%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60
           M +SQIR FRR+++ ++KDLI+LT+VR+FAAGGK KKGSKGGAA DAPKASILSKEVKST
Sbjct: 1   MAMSQIRLFRRSLL-NTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKST 60

Query: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120
           TVVGANILKEGADPK+MADSEYP WLW L+DK P LSELRRK+A++LPY DL+RFVKLDT
Sbjct: 61  TVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYEDLKRFVKLDT 120

Query: 121 RARIKENNSIKAK 134
           RARIKENNS KAK
Sbjct: 121 RARIKENNSSKAK 131

[Close]

BLAST of Cmc08g0227401 vs. TAIR 10
Match: AT3G01740.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-41
Identity = 84/118 (71.19%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 16  SSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPK 75
           SSKD+++ T     AA  K+KKG KGG A+DAPK S L+KE+KSTTVVGAN LK+G+DPK
Sbjct: 11  SSKDVVRRTFA---AAASKAKKGGKGGGASDAPKGSSLTKEIKSTTVVGANTLKDGSDPK 70

Query: 76  IMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK 134
           I+ DS+YP WLWHLLDK P LSELRRKN E+LPY DL+RFVKLDTR +IKENNSIKAK
Sbjct: 71  ILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRGKIKENNSIKAK 125

[Close]

BLAST of Cmc08g0227401 vs. TAIR 10
Match: AT5G14290.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 144.8 bits (364), Expect = 4.9e-35
Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 3   LSQIRFFRRNIIVSSKDLIQLTSVRSFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTT 62
           ++ IR F  + I  SKD+++    R+FA A GK+KK  +G    DAPKAS LSKE+KS+ 
Sbjct: 1   MNLIRMF-GDSISRSKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLSKEIKSSM 60

Query: 63  VVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTR 122
           VV AN LK+G DPKI+ +S++P +LWHLLDK P LSELRRKN E+L + DL+RFVKLDTR
Sbjct: 61  VVSANTLKDGLDPKILPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTR 120

Query: 123 ARIKENNSIKAK 134
           ARIKEN+SIKAK
Sbjct: 121 ARIKENHSIKAK 131

The following BLAST results are available for this feature:

BLAST of Cmc08g0227401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442187.1	1.6e-64	100.00	PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_016899597.1	1.6e-64	100.00	PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo] >K...	[more]
KAE8649745.1	2.0e-59	93.89	hypothetical protein Csa_012025 [Cucumis sativus]	[more]
XP_004144674.3	2.0e-59	93.89	39S ribosomal protein L54, mitochondrial [Cucumis sativus]	[more]
XP_038883607.1	8.0e-56	88.72	54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_0388...	[more]

BLAST of Cmc08g0227401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CPW3	3.0e-05	37.50	39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1...	[more]

BLAST of Cmc08g0227401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXE8	7.8e-65	100.00	39S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B544	7.8e-65	100.00	54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S4DUD4	7.8e-65	100.00	39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0KYS4	1.3e-59	93.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539610 PE=4 SV=1	[more]
A0A6J1JQ61	2.7e-49	80.45	54S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Cmc08g0227401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01740.1	1.2e-41	71.19	Mitochondrial ribosomal protein L37	[more]
AT5G14290.1	4.9e-35	60.61	Mitochondrial ribosomal protein L37	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013870	Ribosomal protein L37, mitochondrial	PFAM	PF08561	Ribosomal_L37	coord: 53..93 e-value: 2.1E-13 score: 50.9
IPR013870	Ribosomal protein L37, mitochondrial	PANTHER	PTHR28595	39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL	coord: 20..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227401.1	Cmc08g0227401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome