Cmc08g0227251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 20153641 .. 20154994 (-)
RNA-Seq Expression	Cmc08g0227251
Synteny	Cmc08g0227251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACTATACCGGTCTTAGCACTACCAGACTGGAATCTGCCCTTTACCATAGAAACAGACGCATCAGGCAGCGGCTTGGGGGCAGTTTTATCGCAAAGAGGACATCCCATAGCCTTTTATAGTCAGAAGCTGTCGCAGAGGGCTCAGGCGAAGTCGATATATGAAAGAGAATTGATGGCTGTGGTGTTATCGGTACAAAGGTGGCGGCATTATCTGTTGGGGAGGAAATTTTCTATCCTATCTGACCAGAAGGCCTTGAAGTTTTTGTTAGAACAAAGAGAAGTGCAGCCTCAATTCCAGAAATGGCTAACCAAACTCCTTGGGTATGATTTCGAAATACTCTATCAACCGGGGTTGTTAAACAAAGCGGCAGATGCTCTCTCAAGAGTTGAACCAAGGATAGAGCTTCATGAAATGACAACTTCTGGAATTGTCTGACATCAGTATTGTGAGTGAAGAAGTAGACAAAGATGAAGAGCTCCAGCTAATTGTGGCAAAGTTGAAGAAGGAACAGGAAGTGGGAGGAAAATTCGAATGGAAGAATGATAGATTACTCTACAAAGGAAGACTTGTACTACCATGGACTTCTTCCCTCATTCCTAGATTGCTACATAGTTTCCATGATTCAGTGTTAGGAGGCCATTCTGGGTTCCTACGAACGTATAAGAGGATGAGTGGAGAACTTTATTGGCAGGGGATGAAGAATGACATAAAGAAGTACGTGGATCAGTGTGAGGTTTGTCAGCGAAACAAATATGAAGCTACTAAATCGGCTGGTGTTCTCCAACCTCTACCAATTCCAAACAAAATCTTGGAAGATTGGACGATGGACTTTATAGGACTACCTAAGGCAGGGGGCGTGAATGTAATCATGGTGGTGGTAGATCGCCTAACTAAATACGCCTACTTAATCACTCTTAAACACCCCTTCTCGGCGAAACAAGTAGCTCTAACCTTCATTGACAAGGTGGTTAGACGACATGGTACCCCAAACTCCATCATATCGGATAGAGACAAGATCTTCCTCAGTAATTTTTGGAAGGAATTATTCGCTACAATGGGAACCCTACTGAAAAGAAGTACTGCTTTCCACCCACAGACGGATGGACAAACTGAAAGAGTGAATCAATGCTTAGAATCTTACTTGAGATGCTTTTGTAATGAGCAGTCGCACAAGTGGGATCAGTTCATACCGTGGGCTGAATTATGGTACAACACTACTTTCCATGCATCTACAAAAACTACTCCCTTTGAGGCAGTCTATGGTCGTACCCCTCCCCCTTTGCTATCCTACGAGGATAAGAAAACCACTAACAATGAAGTGGAATGGATGTTGAAGGCCGTGGCTTAG

mRNA sequence

ATGACAACTATACCGGTCTTAGCACTACCAGACTGGAATCTGCCCTTTACCATAGAAACAGACGCATCAGGCAGCGGCTTGGGGGCAGTTTTATCGCAAAGAGGACATCCCATAGCCTTTTATAGTCAGAAGCTGTCGCAGAGGGCTCAGGCGAAGTCGATATATGAAAGAGAATTGATGGCTGTGGTGTTATCGGTACAAAGGTGGCGGCATTATCTGTTGGGGAGGAAATTTTCTATCCTATCTGACCAGAAGGCCTTGAAGTTTTTGTTAGAACAAAGAGAAGTGCAGCCTCAATTCCAGAAATGGCTAACCAAACTCCTTGGGTATGATTTCGAAATACTCTATCAACCGGGGTTGTTAAACAAAGCGGCAGATGCTCTCTCAAGAGTTGAACCAAGGATAGAGCTTCATGAAATGACAACTTCTGGAATTCTAATTGTGGCAAAGTTGAAGAAGGAACAGGAAGTGGGAGGAAAATTCGAATGGAAGAATGATAGATTACTCTACAAAGGAAGACTTGTACTACCATGGACTTCTTCCCTCATTCCTAGATTGCTACATAGTTTCCATGATTCAGTGTTAGGAGGCCATTCTGGGTTCCTACGAACGTATAAGAGGATGAGTGGAGAACTTTATTGGCAGGGGATGAAGAATGACATAAAGAAGTACGTGGATCAGTGTGAGGTTTGTCAGCGAAACAAATATGAAGCTACTAAATCGGCTGGTGTTCTCCAACCTCTACCAATTCCAAACAAAATCTTGGAAGATTGGACGATGGACTTTATAGGACTACCTAAGGCAGGGGGCGTGAATGTAATCATGGTGGTGGTAGATCGCCTAACTAAATACGCCTACTTAATCACTCTTAAACACCCCTTCTCGGCGAAACAAGTAGCTCTAACCTTCATTGACAAGGTGGTTAGACGACATGGTACCCCAAACTCCATCATATCGGATAGAGACAAGATCTTCCTCAGTAATTTTTGGAAGGAATTATTCGCTACAATGGGAACCCTACTGAAAAGAAGTACTGCTTTCCACCCACAGACGGATGGACAAACTGAAAGAGTGAATCAATGCTTAGAATCTTACTTGAGATGCTTTTGTAATGAGCAGTCGCACAAGTGGGATCAGTTCATACCGTGGGCTGAATTATGGTACAACACTACTTTCCATGCATCTACAAAAACTACTCCCTTTGAGGCAGTCTATGGTCGTACCCCTCCCCCTTTGCTATCCTACGAGGATAAGAAAACCACTAACAATGAAGTGGAATGGATGTTGAAGGCCGTGGCTTAG

Coding sequence (CDS)

ATGACAACTATACCGGTCTTAGCACTACCAGACTGGAATCTGCCCTTTACCATAGAAACAGACGCATCAGGCAGCGGCTTGGGGGCAGTTTTATCGCAAAGAGGACATCCCATAGCCTTTTATAGTCAGAAGCTGTCGCAGAGGGCTCAGGCGAAGTCGATATATGAAAGAGAATTGATGGCTGTGGTGTTATCGGTACAAAGGTGGCGGCATTATCTGTTGGGGAGGAAATTTTCTATCCTATCTGACCAGAAGGCCTTGAAGTTTTTGTTAGAACAAAGAGAAGTGCAGCCTCAATTCCAGAAATGGCTAACCAAACTCCTTGGGTATGATTTCGAAATACTCTATCAACCGGGGTTGTTAAACAAAGCGGCAGATGCTCTCTCAAGAGTTGAACCAAGGATAGAGCTTCATGAAATGACAACTTCTGGAATTCTAATTGTGGCAAAGTTGAAGAAGGAACAGGAAGTGGGAGGAAAATTCGAATGGAAGAATGATAGATTACTCTACAAAGGAAGACTTGTACTACCATGGACTTCTTCCCTCATTCCTAGATTGCTACATAGTTTCCATGATTCAGTGTTAGGAGGCCATTCTGGGTTCCTACGAACGTATAAGAGGATGAGTGGAGAACTTTATTGGCAGGGGATGAAGAATGACATAAAGAAGTACGTGGATCAGTGTGAGGTTTGTCAGCGAAACAAATATGAAGCTACTAAATCGGCTGGTGTTCTCCAACCTCTACCAATTCCAAACAAAATCTTGGAAGATTGGACGATGGACTTTATAGGACTACCTAAGGCAGGGGGCGTGAATGTAATCATGGTGGTGGTAGATCGCCTAACTAAATACGCCTACTTAATCACTCTTAAACACCCCTTCTCGGCGAAACAAGTAGCTCTAACCTTCATTGACAAGGTGGTTAGACGACATGGTACCCCAAACTCCATCATATCGGATAGAGACAAGATCTTCCTCAGTAATTTTTGGAAGGAATTATTCGCTACAATGGGAACCCTACTGAAAAGAAGTACTGCTTTCCACCCACAGACGGATGGACAAACTGAAAGAGTGAATCAATGCTTAGAATCTTACTTGAGATGCTTTTGTAATGAGCAGTCGCACAAGTGGGATCAGTTCATACCGTGGGCTGAATTATGGTACAACACTACTTTCCATGCATCTACAAAAACTACTCCCTTTGAGGCAGTCTATGGTCGTACCCCTCCCCCTTTGCTATCCTACGAGGATAAGAAAACCACTAACAATGAAGTGGAATGGATGTTGAAGGCCGTGGCTTAG

Protein sequence

MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELMAVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLLNKAADALSRVEPRIELHEMTTSGILIVAKLKKEQEVGGKFEWKNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKKYVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFIGLPKAGGVNVIMVVVDRLTKYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLKRSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFEAVYGRTPPPLLSYEDKKTTNNEVEWMLKAVA

Homology

[Close]

BLAST of Cmc08g0227251 vs. NCBI nr
Match: TYK02435.1 (disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 847.4 bits (2188), Expect = 5.3e-242
Identity = 421/448 (93.97%), Postives = 424/448 (94.64%), Query Frame = 0


Query: 1   MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
           MTTIP+LALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM
Sbjct: 229 MTTIPILALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 288

Query: 61  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
           AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL
Sbjct: 289 AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 348

Query: 121 LNKAADALSRVEPRIELHEMTTSGI-----------------LIVAKLKKEQEVGGKFEW 180
           LNKAADALSRVEPRI LHEMTTSGI                 LIVAKLKKEQEVGGKFEW
Sbjct: 349 LNKAADALSRVEPRIGLHEMTTSGIVDISIVSEEVDKDEELQLIVAKLKKEQEVGGKFEW 408

Query: 181 KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
           KNDRLLYKGRLVLP TSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 409 KNDRLLYKGRLVLPQTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 468

Query: 241 YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
           YVDQCEVCQRNKYEATK A VLQPLPIP+KILEDWTMDFI GLPKAGGVNVIMVVVDRLT
Sbjct: 469 YVDQCEVCQRNKYEATKPARVLQPLPIPDKILEDWTMDFIEGLPKAGGVNVIMVVVDRLT 528

Query: 301 KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
           KYAY ITLKHPFSAKQVALTFIDKVVRRHGTPNSI+SDRDKIFLSNFWKELFATMGTLLK
Sbjct: 529 KYAYFITLKHPFSAKQVALTFIDKVVRRHGTPNSIVSDRDKIFLSNFWKELFATMGTLLK 588

Query: 361 RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
           RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE
Sbjct: 589 RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 648

Query: 421 AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
           AVYGRTPPPLLSYEDKKTTNNEVE MLK
Sbjct: 649 AVYGRTPPPLLSYEDKKTTNNEVESMLK 676

[Close]

BLAST of Cmc08g0227251 vs. NCBI nr
Match: KAA0039128.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 830.5 bits (2144), Expect = 6.8e-237
Identity = 410/448 (91.52%), Postives = 420/448 (93.75%), Query Frame = 0


Query: 1    MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
            MTTIPVL LPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQ+AQAKSIYERELM
Sbjct: 877  MTTIPVLTLPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQKAQAKSIYERELM 936

Query: 61   AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
             VVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 
Sbjct: 937  VVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGQ 996

Query: 121  LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
            LNKAADALSRVEP IELHEMTTSGI+                 IVAKLKKEQEVGGKFEW
Sbjct: 997  LNKAADALSRVEPSIELHEMTTSGIVDISVVCEEVDKDEELQKIVAKLKKEQEVGGKFEW 1056

Query: 181  KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
            KN RLLYKGRLVLP TSSLIPRLLH+FHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 1057 KNGRLLYKGRLVLPRTSSLIPRLLHTFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 1116

Query: 241  YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
            YVDQCEVCQRNKYEATKSAGVLQPLPIP+KILEDWTMDFI GLPKAGG+NVIMVVVDRLT
Sbjct: 1117 YVDQCEVCQRNKYEATKSAGVLQPLPIPDKILEDWTMDFIEGLPKAGGMNVIMVVVDRLT 1176

Query: 301  KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
            KYAY ITLKHPFSAKQVALTFIDK+VRRHGTPNSIISDRDKIFLSNFW+ELFA+MGTLLK
Sbjct: 1177 KYAYFITLKHPFSAKQVALTFIDKIVRRHGTPNSIISDRDKIFLSNFWRELFASMGTLLK 1236

Query: 361  RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
            RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFHASTKTTPFE
Sbjct: 1237 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHASTKTTPFE 1296

Query: 421  AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
            AVYGR+PPPLLSY DKKTTNNEVE MLK
Sbjct: 1297 AVYGRSPPPLLSYGDKKTTNNEVELMLK 1324

[Close]

BLAST of Cmc08g0227251 vs. NCBI nr
Match: KAA0034826.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 823.9 bits (2127), Expect = 6.3e-235
Identity = 408/448 (91.07%), Postives = 417/448 (93.08%), Query Frame = 0


Query: 1   MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
           MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQ KSIYERELM
Sbjct: 225 MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQTKSIYERELM 284

Query: 61  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
           AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP L
Sbjct: 285 AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPRL 344

Query: 121 LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
           LNK ADALSRVEPRIELHEMTTSGI+                 IV KLKKEQEVGGKFEW
Sbjct: 345 LNKTADALSRVEPRIELHEMTTSGIVDISIVSEEVDKDEELQQIVTKLKKEQEVGGKFEW 404

Query: 181 KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
           KN+RLLYKGRLVLP TSSLIPRLLH+FHD VLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 405 KNNRLLYKGRLVLPRTSSLIPRLLHTFHDYVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 464

Query: 241 YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
           YVDQCEVCQRNKYEATK A VLQPLPIP+KILEDWTMDFI GLPKAGGVNVIMVVVDRLT
Sbjct: 465 YVDQCEVCQRNKYEATKPADVLQPLPIPDKILEDWTMDFIEGLPKAGGVNVIMVVVDRLT 524

Query: 301 KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
           KYAY ITLKHPFSAKQVALTFIDKVV+RHGTPNSIISDRDKIFLSNFWKELFA+MGTLLK
Sbjct: 525 KYAYFITLKHPFSAKQVALTFIDKVVKRHGTPNSIISDRDKIFLSNFWKELFASMGTLLK 584

Query: 361 RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
           RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFHASTKTTPFE
Sbjct: 585 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHASTKTTPFE 644

Query: 421 AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
           AVYGR PPPLLSY D+KTTNNEVE +LK
Sbjct: 645 AVYGRAPPPLLSYGDRKTTNNEVESLLK 672

[Close]

BLAST of Cmc08g0227251 vs. NCBI nr
Match: KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 406/448 (90.62%), Postives = 419/448 (93.53%), Query Frame = 0


Query: 1    MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
            MTTIPVLALPDW+LPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM
Sbjct: 877  MTTIPVLALPDWSLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 936

Query: 61   AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
            AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 
Sbjct: 937  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGQ 996

Query: 121  LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
            LNKAADALSRVEP+IELHEMTTSGI+                 IVAKLKKEQEV GKFEW
Sbjct: 997  LNKAADALSRVEPKIELHEMTTSGIVDISVVCEEVDKDEGLQKIVAKLKKEQEVDGKFEW 1056

Query: 181  KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
            KN RLLYKGRLVLP TSSLIPRLLH+FHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 1057 KNGRLLYKGRLVLPQTSSLIPRLLHTFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 1116

Query: 241  YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
            YV+QCEVCQRNKYEATK AGVLQPLPIP+KILEDWTMDFI GLPKAGG+NVIMVVVDRLT
Sbjct: 1117 YVEQCEVCQRNKYEATKPAGVLQPLPIPDKILEDWTMDFIEGLPKAGGMNVIMVVVDRLT 1176

Query: 301  KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
            KYAY ITLKHPFSAKQVALTFIDK+VRRHG PNSIISDRDKIFLSNFW+ELFA+MGTLLK
Sbjct: 1177 KYAYFITLKHPFSAKQVALTFIDKIVRRHGIPNSIISDRDKIFLSNFWRELFASMGTLLK 1236

Query: 361  RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
            RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFH+STKTTPFE
Sbjct: 1237 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHSSTKTTPFE 1296

Query: 421  AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
            AVYGR+PPPLLSY DKK TNNEVE MLK
Sbjct: 1297 AVYGRSPPPLLSYGDKKATNNEVEVMLK 1324

[Close]

BLAST of Cmc08g0227251 vs. NCBI nr
Match: TYJ99303.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 406/448 (90.62%), Postives = 419/448 (93.53%), Query Frame = 0


Query: 1    MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
            MTTIPVLALPDW+LPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM
Sbjct: 877  MTTIPVLALPDWSLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 936

Query: 61   AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
            AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 
Sbjct: 937  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGQ 996

Query: 121  LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
            LNKAADALSRVEP+IELHEMTTSGI+                 IVAKLKKEQEV GKFEW
Sbjct: 997  LNKAADALSRVEPKIELHEMTTSGIVDISVVCEEVDKDEGLQKIVAKLKKEQEVDGKFEW 1056

Query: 181  KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
            KN RLLYKGRLVLP TSSLIPRLLH+FHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 1057 KNGRLLYKGRLVLPQTSSLIPRLLHTFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 1116

Query: 241  YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
            YV+QCEVCQRNKYEATK AGVLQPLPIP+KILEDWTMDFI GLPKAGG+NVIMVVVDRLT
Sbjct: 1117 YVEQCEVCQRNKYEATKPAGVLQPLPIPDKILEDWTMDFIEGLPKAGGMNVIMVVVDRLT 1176

Query: 301  KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
            KYAY ITLKHPFSAKQVALTFIDK+VRRHG PNSIISDRDKIFLSNFW+ELFA+MGTLLK
Sbjct: 1177 KYAYFITLKHPFSAKQVALTFIDKIVRRHGIPNSIISDRDKIFLSNFWRELFASMGTLLK 1236

Query: 361  RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
            RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFH+STKTTPFE
Sbjct: 1237 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHSSTKTTPFE 1296

Query: 421  AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
            AVYGR+PPPLLSY DKK TNNEVE MLK
Sbjct: 1297 AVYGRSPPPLLSYGDKKATNNEVEVMLK 1324

[Close]

BLAST of Cmc08g0227251 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.3e-61
Identity = 148/462 (32.03%), Postives = 227/462 (49.13%), Query Frame = 0


Query: 5    PVLALPDWNLPFTIETDASGSGLGAVLSQRG-----HPIAFYSQKLSQRAQAKSIYEREL 64
            PVL   D++    +ETDAS   +GAVLSQ+      +P+ +YS K+S+     S+ ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQRWRHYLLG--RKFSILSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 124
            +A++ S++ WRHYL      F IL+D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLLNKAADALSRVEPRIE---------------------------LHEMTTSGILIV 184
            Y+PG  N  ADALSR+    E                           + E T    L+ 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  AKLKKEQEVGGKFEWKNDRLL-YKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKR 244
                +++ V    + K+  L+  K +++LP  + L   ++  +H+     H G       
Sbjct: 877  LLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 936

Query: 245  MSGELYWQGMKNDIKKYVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLP 304
            +     W+G++  I++YV  C  CQ NK    K  G LQP+P   +  E  +MDFI  LP
Sbjct: 937  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996

Query: 305  KAGGVNVIMVVVDRLTKYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFL 364
            ++ G N + VVVDR +K A L+      +A+Q A  F  +V+   G P  II+D D IF 
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 365  SNFWKELFATMGTLLKRSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAEL 424
            S  WK+       ++K S  + PQTDGQTER NQ +E  LRC C+   + W   I   + 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

[Close]

BLAST of Cmc08g0227251 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.3e-61
Identity = 148/462 (32.03%), Postives = 227/462 (49.13%), Query Frame = 0


Query: 5    PVLALPDWNLPFTIETDASGSGLGAVLSQRG-----HPIAFYSQKLSQRAQAKSIYEREL 64
            PVL   D++    +ETDAS   +GAVLSQ+      +P+ +YS K+S+     S+ ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQRWRHYLLG--RKFSILSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 124
            +A++ S++ WRHYL      F IL+D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLLNKAADALSRVEPRIE---------------------------LHEMTTSGILIV 184
            Y+PG  N  ADALSR+    E                           + E T    L+ 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  AKLKKEQEVGGKFEWKNDRLL-YKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKR 244
                +++ V    + K+  L+  K +++LP  + L   ++  +H+     H G       
Sbjct: 877  LLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 936

Query: 245  MSGELYWQGMKNDIKKYVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLP 304
            +     W+G++  I++YV  C  CQ NK    K  G LQP+P   +  E  +MDFI  LP
Sbjct: 937  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996

Query: 305  KAGGVNVIMVVVDRLTKYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFL 364
            ++ G N + VVVDR +K A L+      +A+Q A  F  +V+   G P  II+D D IF 
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 365  SNFWKELFATMGTLLKRSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAEL 424
            S  WK+       ++K S  + PQTDGQTER NQ +E  LRC C+   + W   I   + 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

[Close]

BLAST of Cmc08g0227251 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.3e-61
Identity = 148/462 (32.03%), Postives = 227/462 (49.13%), Query Frame = 0


Query: 5    PVLALPDWNLPFTIETDASGSGLGAVLSQRG-----HPIAFYSQKLSQRAQAKSIYEREL 64
            PVL   D++    +ETDAS   +GAVLSQ+      +P+ +YS K+S+     S+ ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQRWRHYLLG--RKFSILSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 124
            +A++ S++ WRHYL      F IL+D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLLNKAADALSRVEPRIE---------------------------LHEMTTSGILIV 184
            Y+PG  N  ADALSR+    E                           + E T    L+ 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  AKLKKEQEVGGKFEWKNDRLL-YKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKR 244
                +++ V    + K+  L+  K +++LP  + L   ++  +H+     H G       
Sbjct: 877  LLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 936

Query: 245  MSGELYWQGMKNDIKKYVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLP 304
            +     W+G++  I++YV  C  CQ NK    K  G LQP+P   +  E  +MDFI  LP
Sbjct: 937  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996

Query: 305  KAGGVNVIMVVVDRLTKYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFL 364
            ++ G N + VVVDR +K A L+      +A+Q A  F  +V+   G P  II+D D IF 
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 365  SNFWKELFATMGTLLKRSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAEL 424
            S  WK+       ++K S  + PQTDGQTER NQ +E  LRC C+   + W   I   + 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

[Close]

BLAST of Cmc08g0227251 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.3e-61
Identity = 148/462 (32.03%), Postives = 227/462 (49.13%), Query Frame = 0


Query: 5    PVLALPDWNLPFTIETDASGSGLGAVLSQRG-----HPIAFYSQKLSQRAQAKSIYEREL 64
            PVL   D++    +ETDAS   +GAVLSQ+      +P+ +YS K+S+     S+ ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQRWRHYLLG--RKFSILSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 124
            +A++ S++ WRHYL      F IL+D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLLNKAADALSRVEPRIE---------------------------LHEMTTSGILIV 184
            Y+PG  N  ADALSR+    E                           + E T    L+ 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  AKLKKEQEVGGKFEWKNDRLL-YKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKR 244
                +++ V    + K+  L+  K +++LP  + L   ++  +H+     H G       
Sbjct: 877  LLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 936

Query: 245  MSGELYWQGMKNDIKKYVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLP 304
            +     W+G++  I++YV  C  CQ NK    K  G LQP+P   +  E  +MDFI  LP
Sbjct: 937  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996

Query: 305  KAGGVNVIMVVVDRLTKYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFL 364
            ++ G N + VVVDR +K A L+      +A+Q A  F  +V+   G P  II+D D IF 
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 365  SNFWKELFATMGTLLKRSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAEL 424
            S  WK+       ++K S  + PQTDGQTER NQ +E  LRC C+   + W   I   + 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

[Close]

BLAST of Cmc08g0227251 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.3e-61
Identity = 148/462 (32.03%), Postives = 227/462 (49.13%), Query Frame = 0


Query: 5    PVLALPDWNLPFTIETDASGSGLGAVLSQRG-----HPIAFYSQKLSQRAQAKSIYEREL 64
            PVL   D++    +ETDAS   +GAVLSQ+      +P+ +YS K+S+     S+ ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQRWRHYLLG--RKFSILSDQKAL--KFLLEQREVQPQFQKWLTKLLGYDFEIL 124
            +A++ S++ WRHYL      F IL+D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLLNKAADALSRVEPRIE---------------------------LHEMTTSGILIV 184
            Y+PG  N  ADALSR+    E                           + E T    L+ 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  AKLKKEQEVGGKFEWKNDRLL-YKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKR 244
                +++ V    + K+  L+  K +++LP  + L   ++  +H+     H G       
Sbjct: 877  LLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 936

Query: 245  MSGELYWQGMKNDIKKYVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLP 304
            +     W+G++  I++YV  C  CQ NK    K  G LQP+P   +  E  +MDFI  LP
Sbjct: 937  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 996

Query: 305  KAGGVNVIMVVVDRLTKYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFL 364
            ++ G N + VVVDR +K A L+      +A+Q A  F  +V+   G P  II+D D IF 
Sbjct: 997  ESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFT 1056

Query: 365  SNFWKELFATMGTLLKRSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAEL 424
            S  WK+       ++K S  + PQTDGQTER NQ +E  LRC C+   + W   I   + 
Sbjct: 1057 SQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQ 1116

[Close]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL
Match: A0A5D3BTC7 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00390 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.6e-242
Identity = 421/448 (93.97%), Postives = 424/448 (94.64%), Query Frame = 0


Query: 1   MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
           MTTIP+LALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM
Sbjct: 229 MTTIPILALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 288

Query: 61  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
           AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL
Sbjct: 289 AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 348

Query: 121 LNKAADALSRVEPRIELHEMTTSGI-----------------LIVAKLKKEQEVGGKFEW 180
           LNKAADALSRVEPRI LHEMTTSGI                 LIVAKLKKEQEVGGKFEW
Sbjct: 349 LNKAADALSRVEPRIGLHEMTTSGIVDISIVSEEVDKDEELQLIVAKLKKEQEVGGKFEW 408

Query: 181 KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
           KNDRLLYKGRLVLP TSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 409 KNDRLLYKGRLVLPQTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 468

Query: 241 YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
           YVDQCEVCQRNKYEATK A VLQPLPIP+KILEDWTMDFI GLPKAGGVNVIMVVVDRLT
Sbjct: 469 YVDQCEVCQRNKYEATKPARVLQPLPIPDKILEDWTMDFIEGLPKAGGVNVIMVVVDRLT 528

Query: 301 KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
           KYAY ITLKHPFSAKQVALTFIDKVVRRHGTPNSI+SDRDKIFLSNFWKELFATMGTLLK
Sbjct: 529 KYAYFITLKHPFSAKQVALTFIDKVVRRHGTPNSIVSDRDKIFLSNFWKELFATMGTLLK 588

Query: 361 RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
           RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE
Sbjct: 589 RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 648

Query: 421 AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
           AVYGRTPPPLLSYEDKKTTNNEVE MLK
Sbjct: 649 AVYGRTPPPLLSYEDKKTTNNEVESMLK 676

[Close]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL
Match: A0A5A7T8C0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00570 PE=4 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 3.3e-237
Identity = 410/448 (91.52%), Postives = 420/448 (93.75%), Query Frame = 0


Query: 1    MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
            MTTIPVL LPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQ+AQAKSIYERELM
Sbjct: 877  MTTIPVLTLPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQKAQAKSIYERELM 936

Query: 61   AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
             VVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 
Sbjct: 937  VVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGQ 996

Query: 121  LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
            LNKAADALSRVEP IELHEMTTSGI+                 IVAKLKKEQEVGGKFEW
Sbjct: 997  LNKAADALSRVEPSIELHEMTTSGIVDISVVCEEVDKDEELQKIVAKLKKEQEVGGKFEW 1056

Query: 181  KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
            KN RLLYKGRLVLP TSSLIPRLLH+FHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 1057 KNGRLLYKGRLVLPRTSSLIPRLLHTFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 1116

Query: 241  YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
            YVDQCEVCQRNKYEATKSAGVLQPLPIP+KILEDWTMDFI GLPKAGG+NVIMVVVDRLT
Sbjct: 1117 YVDQCEVCQRNKYEATKSAGVLQPLPIPDKILEDWTMDFIEGLPKAGGMNVIMVVVDRLT 1176

Query: 301  KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
            KYAY ITLKHPFSAKQVALTFIDK+VRRHGTPNSIISDRDKIFLSNFW+ELFA+MGTLLK
Sbjct: 1177 KYAYFITLKHPFSAKQVALTFIDKIVRRHGTPNSIISDRDKIFLSNFWRELFASMGTLLK 1236

Query: 361  RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
            RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFHASTKTTPFE
Sbjct: 1237 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHASTKTTPFE 1296

Query: 421  AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
            AVYGR+PPPLLSY DKKTTNNEVE MLK
Sbjct: 1297 AVYGRSPPPLLSYGDKKTTNNEVELMLK 1324

[Close]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL
Match: A0A5A7SY68 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00630 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 3.1e-235
Identity = 408/448 (91.07%), Postives = 417/448 (93.08%), Query Frame = 0


Query: 1   MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
           MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQ KSIYERELM
Sbjct: 225 MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQTKSIYERELM 284

Query: 61  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
           AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP L
Sbjct: 285 AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPRL 344

Query: 121 LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
           LNK ADALSRVEPRIELHEMTTSGI+                 IV KLKKEQEVGGKFEW
Sbjct: 345 LNKTADALSRVEPRIELHEMTTSGIVDISIVSEEVDKDEELQQIVTKLKKEQEVGGKFEW 404

Query: 181 KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
           KN+RLLYKGRLVLP TSSLIPRLLH+FHD VLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 405 KNNRLLYKGRLVLPRTSSLIPRLLHTFHDYVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 464

Query: 241 YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
           YVDQCEVCQRNKYEATK A VLQPLPIP+KILEDWTMDFI GLPKAGGVNVIMVVVDRLT
Sbjct: 465 YVDQCEVCQRNKYEATKPADVLQPLPIPDKILEDWTMDFIEGLPKAGGVNVIMVVVDRLT 524

Query: 301 KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
           KYAY ITLKHPFSAKQVALTFIDKVV+RHGTPNSIISDRDKIFLSNFWKELFA+MGTLLK
Sbjct: 525 KYAYFITLKHPFSAKQVALTFIDKVVKRHGTPNSIISDRDKIFLSNFWKELFASMGTLLK 584

Query: 361 RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
           RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFHASTKTTPFE
Sbjct: 585 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHASTKTTPFE 644

Query: 421 AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
           AVYGR PPPLLSY D+KTTNNEVE +LK
Sbjct: 645 AVYGRAPPPLLSYGDRKTTNNEVESLLK 672

[Close]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL
Match: A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/448 (90.62%), Postives = 419/448 (93.53%), Query Frame = 0


Query: 1    MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
            MTTIPVLALPDW+LPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM
Sbjct: 877  MTTIPVLALPDWSLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 936

Query: 61   AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
            AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 
Sbjct: 937  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGQ 996

Query: 121  LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
            LNKAADALSRVEP+IELHEMTTSGI+                 IVAKLKKEQEV GKFEW
Sbjct: 997  LNKAADALSRVEPKIELHEMTTSGIVDISVVCEEVDKDEGLQKIVAKLKKEQEVDGKFEW 1056

Query: 181  KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
            KN RLLYKGRLVLP TSSLIPRLLH+FHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 1057 KNGRLLYKGRLVLPQTSSLIPRLLHTFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 1116

Query: 241  YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
            YV+QCEVCQRNKYEATK AGVLQPLPIP+KILEDWTMDFI GLPKAGG+NVIMVVVDRLT
Sbjct: 1117 YVEQCEVCQRNKYEATKPAGVLQPLPIPDKILEDWTMDFIEGLPKAGGMNVIMVVVDRLT 1176

Query: 301  KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
            KYAY ITLKHPFSAKQVALTFIDK+VRRHG PNSIISDRDKIFLSNFW+ELFA+MGTLLK
Sbjct: 1177 KYAYFITLKHPFSAKQVALTFIDKIVRRHGIPNSIISDRDKIFLSNFWRELFASMGTLLK 1236

Query: 361  RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
            RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFH+STKTTPFE
Sbjct: 1237 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHSSTKTTPFE 1296

Query: 421  AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
            AVYGR+PPPLLSY DKK TNNEVE MLK
Sbjct: 1297 AVYGRSPPPLLSYGDKKATNNEVEVMLK 1324

[Close]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL
Match: A0A5D3BJ50 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005160 PE=4 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/448 (90.62%), Postives = 419/448 (93.53%), Query Frame = 0


Query: 1    MTTIPVLALPDWNLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 60
            MTTIPVLALPDW+LPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM
Sbjct: 877  MTTIPVLALPDWSLPFTIETDASGSGLGAVLSQRGHPIAFYSQKLSQRAQAKSIYERELM 936

Query: 61   AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 120
            AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPG 
Sbjct: 937  AVVLSVQRWRHYLLGRKFSILSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGQ 996

Query: 121  LNKAADALSRVEPRIELHEMTTSGIL-----------------IVAKLKKEQEVGGKFEW 180
            LNKAADALSRVEP+IELHEMTTSGI+                 IVAKLKKEQEV GKFEW
Sbjct: 997  LNKAADALSRVEPKIELHEMTTSGIVDISVVCEEVDKDEGLQKIVAKLKKEQEVDGKFEW 1056

Query: 181  KNDRLLYKGRLVLPWTSSLIPRLLHSFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 240
            KN RLLYKGRLVLP TSSLIPRLLH+FHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK
Sbjct: 1057 KNGRLLYKGRLVLPQTSSLIPRLLHTFHDSVLGGHSGFLRTYKRMSGELYWQGMKNDIKK 1116

Query: 241  YVDQCEVCQRNKYEATKSAGVLQPLPIPNKILEDWTMDFI-GLPKAGGVNVIMVVVDRLT 300
            YV+QCEVCQRNKYEATK AGVLQPLPIP+KILEDWTMDFI GLPKAGG+NVIMVVVDRLT
Sbjct: 1117 YVEQCEVCQRNKYEATKPAGVLQPLPIPDKILEDWTMDFIEGLPKAGGMNVIMVVVDRLT 1176

Query: 301  KYAYLITLKHPFSAKQVALTFIDKVVRRHGTPNSIISDRDKIFLSNFWKELFATMGTLLK 360
            KYAY ITLKHPFSAKQVALTFIDK+VRRHG PNSIISDRDKIFLSNFW+ELFA+MGTLLK
Sbjct: 1177 KYAYFITLKHPFSAKQVALTFIDKIVRRHGIPNSIISDRDKIFLSNFWRELFASMGTLLK 1236

Query: 361  RSTAFHPQTDGQTERVNQCLESYLRCFCNEQSHKWDQFIPWAELWYNTTFHASTKTTPFE 420
            RSTAFHPQTDGQTERVNQCLE+YLRCFCNEQ HKWDQFIPWAELWYNTTFH+STKTTPFE
Sbjct: 1237 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPHKWDQFIPWAELWYNTTFHSSTKTTPFE 1296

Query: 421  AVYGRTPPPLLSYEDKKTTNNEVEWMLK 431
            AVYGR+PPPLLSY DKK TNNEVE MLK
Sbjct: 1297 AVYGRSPPPLLSYGDKKATNNEVEVMLK 1324

The following BLAST results are available for this feature:

BLAST of Cmc08g0227251 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02435.1	5.3e-242	93.97	disease resistance protein [Cucumis melo var. makuwa]	[more]
KAA0039128.1	6.8e-237	91.52	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gyp...	[more]
KAA0034826.1	6.3e-235	91.07	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0055376.1	1.8e-234	90.63	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ99303.1	1.8e-234	90.63	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0227251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	4.3e-61	32.03	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.3e-61	32.03	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.3e-61	32.03	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.3e-61	32.03	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	4.3e-61	32.03	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTC7	2.6e-242	93.97	Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7T8C0	3.3e-237	91.52	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7SY68	3.1e-235	91.07	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7UM77	8.9e-235	90.63	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BJ50	8.9e-235	90.63	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc08g0227251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 11..81 e-value: 1.3E-9 score: 39.9
None	No IPR available	GENE3D	1.10.340.70		coord: 145..235 e-value: 5.3E-17 score: 63.8
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 173..414
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 17..130 e-value: 2.29129E-49 score: 161.892
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 245..432 e-value: 1.5E-49 score: 170.0
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 180..236 e-value: 3.8E-19 score: 68.5
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 11..110 e-value: 1.5E-28 score: 99.2
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 245..408 score: 21.839499
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..116
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 247..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227251.1	Cmc08g0227251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding