
Cmc08g0227161 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCAATGAAAGGCTTGGAATAGGACAGTTTGTCAATTATAGAGTATCAGGTGCATTATGCAATTTTCCATCCTAAACTCACCGACTCTACTTGCTTCTTCTTCTAGCATAAGACGTAGCACAATTCCTTGCCACCGATCAAGACCCATTTCTTAAATACCACTTTTCTTCACCTCGCAATCTCAGTCTATAGTTCCCGAAATCAGAGACCCAATTCGAGAAAAATTCATATGAACGCCAGGCAGCTGTTCCTCTTGATCTTCACATTCACAACACTTTCCTCACATAAATCGGCTTAACCAAAGCAATGCTAACCCGAAGGCCTTTAATTGAGTTCTTAATCGGTTTCAACTCGGAAACCTGGAAAAGAAGAATAACCCGATGGTTTTCCAGCGATTCAGGGAAGAGATTCGGAGCAGTATGGGGTAATGGCGATTTCGGGAGGCTGGGGCTTGGTAATTTGGATTCTCAATGGAGCCCTGTCCCCTGTTGTTCTGCCTTCGATCGAGAAATGCTCAAGGATATAGCTTGTGGCGGTGCTCACACTCTGTTCTTGACAGGTTCTAAACTTCCCTTCTTTGTAGTTTTACGGCTTGGTTATGGGATTTGTAGTATTATGTATCTGTTATCTATTTGAGGGACATTGTGTTACGTTTCGAGTCCCGCAGATGTTGAGAGCAATCTCCTATGTTTGTGAAGAT TCTCCAATGAAAGGCTTGGAATAGGACAGTTTGTCAATTATAGAGTATCAGGTGCATTATGCAATTTTCCATCCTAAACTCACCGACTCTACTTGCTTCTTCTTCTAGCATAAGACGTAGCACAATTCCTTGCCACCGATCAAGACCCATTTCTTAAATACCACTTTTCTTCACCTCGCAATCTCAGTCTATAGTTCCCGAAATCAGAGACCCAATTCGAGAAAAATTCATATGAACGCCAGGCAGCTGTTCCTCTTGATCTTCACATTCACAACACTTTCCTCACATAAATCGGCTTAACCAAAGCAATGCTAACCCGAAGGCCTTTAATTGAGTTCTTAATCGGTTTCAACTCGGAAACCTGGAAAAGAAGAATAACCCGATGGTTTTCCAGCGATTCAGGGAAGAGATTCGGAGCAGTATGGGGTAATGGCGATTTCGGGAGGCTGGGGCTTGGTAATTTGGATTCTCAATGGAGCCCTGTCCCCTGTTGTTCTGCCTTCGATCGAGAAATGCTCAAGGATATAGCTTGTGGCGGTGCTCACACTCTGTTCTTGACAGATGTTGAGAGCAATCTCCTATGTTTGTGAAGAT ATGCTAACCCGAAGGCCTTTAATTGAGTTCTTAATCGGTTTCAACTCGGAAACCTGGAAAAGAAGAATAACCCGATGGTTTTCCAGCGATTCAGGGAAGAGATTCGGAGCAGTATGGGGTAATGGCGATTTCGGGAGGCTGGGGCTTGGTAATTTGGATTCTCAATGGAGCCCTGTCCCCTGTTGTTCTGCCTTCGATCGAGAAATGCTCAAGGATATAGCTTGTGGCGGTGCTCACACTCTGTTCTTGACAGATGTTGAGAGCAATCTCCTATGTTTGTGA MLTRRPLIEFLIGFNSETWKRRITRWFSSDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCCSAFDREMLKDIACGGAHTLFLTDVESNLLCL Homology
BLAST of Cmc08g0227161 vs. NCBI nr
Match: XP_008442217.1 (PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo] >KAA0041172.1 ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 185.3 bits (469), Expect = 2.5e-43 Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc08g0227161 vs. NCBI nr
Match: TYK02446.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 184.5 bits (467), Expect = 4.2e-43 Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Cmc08g0227161 vs. NCBI nr
Match: XP_031740236.1 (probable E3 ubiquitin-protein ligase HERC4 isoform X3 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Cmc08g0227161 vs. NCBI nr
Match: XP_011653923.1 (ultraviolet-B receptor UVR8 isoform X2 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Cmc08g0227161 vs. NCBI nr
Match: XP_031740235.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 3.4e-37 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.0e-04 Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy Swiss-Prot
Match: Q6NXM2 (RCC1 and BTB domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rcbtb1 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.8e-04 Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy TrEMBL
Match: A0A5A7TCI0 (Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001080 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43 Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy TrEMBL
Match: A0A1S3B5Y7 (ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486133 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43 Identity = 83/85 (97.65%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy TrEMBL
Match: A0A5D3BW43 (Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00530 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43 Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy TrEMBL
Match: A0A0A0KZD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G554170 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37 Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Cmc08g0227161 vs. ExPASy TrEMBL
Match: A0A6J1HRS2 (PH, RCC1 and FYVE domains-containing protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.3e-29 Identity = 67/85 (78.82%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Cmc08g0227161 vs. TAIR 10
Match: AT5G08710.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 95.1 bits (235), Expect = 3.1e-20 Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0
BLAST of Cmc08g0227161 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.2e-05 Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0
BLAST of Cmc08g0227161 vs. TAIR 10
Match: AT3G02510.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04 Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 0
BLAST of Cmc08g0227161 vs. TAIR 10
Match: AT3G47660.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 21/48 (43.75%), Postives = 27/48 (56.25%), Query Frame = 0
BLAST of Cmc08g0227161 vs. TAIR 10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ) HSP 1 Score: 41.6 bits (96), Expect = 4.1e-04 Identity = 20/46 (43.48%), Postives = 23/46 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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