Cmc08g0225891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 17254537 .. 17255797 (-)
RNA-Seq Expression	Cmc08g0225891
Synteny	Cmc08g0225891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGGTCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTGTTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCTTAGTAGTGCACAGAGAAAAGCTAAAGCTAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCTGATGATCTGTCAGGTTTGCCACCTAATAGAGAGATTGAGTTCACCATTGAATTATTACTAGGAACAACACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAGGGGATACATCAGGCCTATTGTTTCGCCGTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACATAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGATCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAATCTCATAAGGAACATCTGAGGATTGTTCTACAGACTCTACGTTGTACGCTAAGTTCAGTAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAACAAAAGGAGTTAATGTCGACCAACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCAACAGAAGTACGTAGTTTTCTGGGTTTGGCAGGATACTATAGGTGTTTTATTGAGGATTTCTCTCGATTGGCATTGACTTCGACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAACACCTATTTTGGCACTTTCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTGATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTAG

mRNA sequence

ATGAGGAAGGTCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTGTTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCTTAGTAGTGCACAGAGAAAAGCTAAAGCTAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCTGATGATCTGTCAGGTTTGCCACCTAATAGAGAGATTGAGTTCACCATTGAATTATTACTAGGAACAACACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAGGGGATACATCAGGCCTATTGTTTCGCCGTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACATAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGAACATCTGAGGATTGTTCTACAGACTCTACGTTGTACGCTAAGTTCAGTAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAACAAAAGGAGTTAATGTCGACCAACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCAACAGAAGTACGTAGTTTTCTGGGTTTGGCAGGATACTATAGGTGTTTTATTGAGGATTTCTCTCGATTGGCATTGACTTCGACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAACACCTATTTTGGCACTTTCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTGATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTAG

Coding sequence (CDS)

ATGAGGAAGGTCGTTTCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTGTTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCTTAGTAGTGCACAGAGAAAAGCTAAAGCTAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCTGATGATCTGTCAGGTTTGCCACCTAATAGAGAGATTGAGTTCACCATTGAATTATTACTAGGAACAACACCTATTTCACAGGCACCGTATAGAATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAGGGGATACATCAGGCCTATTGTTTCGCCGTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCAATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACATAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGAACATCTGAGGATTGTTCTACAGACTCTACGTTGTACGCTAAGTTCAGTAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAACAAAAGGAGTTAATGTCGACCAACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCAACAGAAGTACGTAGTTTTCTGGGTTTGGCAGGATACTATAGGTGTTTTATTGAGGATTTCTCTCGATTGGCATTGACTTCGACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAACACCTATTTTGGCACTTTCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTGATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTAG

Protein sequence

MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGLPPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGTSEDCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWERPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKI

Homology

[Close]

BLAST of Cmc08g0225891 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1    MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
            MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 580  MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 639

Query: 61   PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
            PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 640  PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 699

Query: 121  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
            VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 700  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 759

Query: 181  SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
            SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 760  SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 819

Query: 241  ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                            +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 820  RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 879

Query: 301  RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
            RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 880  RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 939

Query: 361  TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
            T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 940  TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 999

[Close]

BLAST of Cmc08g0225891 vs. NCBI nr
Match: KAA0037582.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
           MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 164 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 223

Query: 61  PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
           PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 224 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 283

Query: 121 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
           VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 284 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 343

Query: 181 SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
           SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 344 SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 403

Query: 241 ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                           +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 404 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 463

Query: 301 RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
           RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 464 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 523

Query: 361 TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
           T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 524 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 583

[Close]

BLAST of Cmc08g0225891 vs. NCBI nr
Match: TYK27507.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
           MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 542 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 601

Query: 61  PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
           PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 602 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 661

Query: 121 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
           VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 662 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 721

Query: 181 SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
           SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 722 SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 781

Query: 241 ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                           +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 782 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 841

Query: 301 RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
           RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 842 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 901

Query: 361 TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
           T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 902 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 961

[Close]

BLAST of Cmc08g0225891 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1    MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
            MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 791  MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 850

Query: 61   PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
            PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 851  PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 910

Query: 121  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
            VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 911  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 970

Query: 181  SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
            SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 971  SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 1030

Query: 241  ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                            +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 1031 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 1090

Query: 301  RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
            RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 1091 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 1150

Query: 361  TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
            T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 1151 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 1210

[Close]

BLAST of Cmc08g0225891 vs. NCBI nr
Match: KAA0041108.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1    MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
            MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 999  MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 1058

Query: 61   PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
            PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 1059 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 1118

Query: 121  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
            VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 1119 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 1178

Query: 181  SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
            SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 1179 SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 1238

Query: 241  ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                            +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 1239 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 1298

Query: 301  RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
            RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 1299 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 1358

Query: 361  TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
            T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 1359 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 1418

[Close]

BLAST of Cmc08g0225891 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 9.1e-55
Identity = 126/367 (34.33%), Postives = 198/367 (53.95%), Query Frame = 0


Query: 69  TIELLLGTT---PISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLFVKKKD 128
           TI+ +L TT   PI    Y +A +   E++ Q+QE++++G IR   SP+ +P   V KK 
Sbjct: 194 TIKHVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKP 253

Query: 129 -----GTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 188
                   R+ IDYR+LN++TI ++YP+P ++++  +L     F+ ID+  G+HQ+++ E
Sbjct: 254 DASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDE 313

Query: 189 SDIAKTTFRTRYGHYEFRVMPFG------TSEDCS------------------------- 248
             I+KT F T+ GHYE+  MPFG      T + C                          
Sbjct: 314 ESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTS 373

Query: 249 ---------------TDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 308
                           D+ L  +  KCEF  ++  FLGH+V+  G+  +  KV+A+V++ 
Sbjct: 374 LTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYP 433

Query: 309 RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCE--QSFQELKKR 368
            PT   E+R+FLGL GYYR FI +++ +A   T+  +K  K + + K E  ++F++LK  
Sbjct: 434 IPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKID-TQKLEYIEAFEKLKAL 493

Query: 369 LVTTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELA 380
           ++  PIL L    K +V+  DAS L LG VL Q+G+ I++ SR L +HE NY   + EL 
Sbjct: 494 IIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELL 553

[Close]

BLAST of Cmc08g0225891 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-52
Identity = 110/340 (32.35%), Postives = 185/340 (54.41%), Query Frame = 0


Query: 92  KELKMQLQELVDRGYIRPIVSPWGAPVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKY 151
           +E++ Q+Q+++++G IR   SP+ +P+  V KK         R+ IDYR+LN++T+ +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 152 PLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFG--- 211
           P+P ++++  +L     F+ ID+  G+HQ+++    ++KT F T++GHYE+  MPFG   
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 212 ---TSEDCSTD----------------------------------------STLYAKFSK 271
              T + C  D                                        + L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 272 CEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWERPTSATEVRSFLGLAGYYRCFIEDFS 331
           CEF  ++  FLGHV++  G+  + +K+EA+  +  PT   E+++FLGL GYYR FI +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 332 RLALTSTALTRKNAKFEWSD-KCEQSFQELKKRLVTTPILALSVTGKDYVIYCDASRLGL 380
            +A   T   +KN K + ++ + + +F++LK  +   PIL +    K + +  DAS + L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

[Close]

BLAST of Cmc08g0225891 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.7e-50
Identity = 125/398 (31.41%), Postives = 196/398 (49.25%), Query Frame = 0


Query: 37  KLKLEDVPVVKEFLDVFPDDLSGLPPNREIEFTIELLLGTTPISQAPYRMAPSELKELKM 96
           K +LE+  +  E++D+F  +   +  N   +  +  L    P+    YR   S+++E++ 
Sbjct: 276 KSQLEN--ICSEYIDIFALESEPITVNNLYKQQLR-LKDDEPVYTKNYRSPHSQVEEIQA 335

Query: 97  QLQELVDRGYIRPIVSPWGAPVLFVKKKDG------TLRLCIDYRQLNKVTIRNKYPLPR 156
           Q+Q+L+    + P VS + +P+L V KK          RL IDYRQ+NK  + +K+PLPR
Sbjct: 336 QVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPR 395

Query: 157 INDLFDQLRGAALFSKIDIRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGTS----- 216
           I+D+ DQL  A  FS +D+ SG+HQ+++ E     T+F T  G Y F  +PFG       
Sbjct: 396 IDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNS 455

Query: 217 ---------------------ED-----CS---------------TDSTLYAKFSKCEFW 276
                                +D     CS                +  L     KC F+
Sbjct: 456 FQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFF 515

Query: 277 LEQVVFLGHVVSTKGVNVDQQKVEAVVNWERPTSATEVRSFLGLAGYYRCFIEDFSRLAL 336
           + +V FLGH  + KG+  D +K + + N+  P  A   R F+    YYR FI++F+  + 
Sbjct: 516 MHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSR 575

Query: 337 TSTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILALSVTGKDYVIYCDASRLGLGCVLM 379
             T L +KN  FEW+D+C+++F  LK +L+   +L      K++ I  DAS+   G VL 
Sbjct: 576 HITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLT 635

[Close]

BLAST of Cmc08g0225891 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 7.4e-49
Identity = 117/384 (30.47%), Postives = 188/384 (48.96%), Query Frame = 0


Query: 45  VVKEFLDVFPDDLSGLPPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDR 104
           +++  L   P D++ +P    ++  IE+  G       PY +     +E+   +Q+L+D 
Sbjct: 593 IIRNDLPPRPADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 652

Query: 105 GYIRPIVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALF 164
            +I P  SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLPRI++L  ++  A +F
Sbjct: 653 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIF 712

Query: 165 SKIDIRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGTSEDCST-------------- 224
           + +D+ SGYHQ+ +   D  KT F T  G YE+ VMPFG     ST              
Sbjct: 713 TTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRF 772

Query: 225 ------------------------------DSTLYAKFSKCEFWLEQVVFLGHVVSTKGV 284
                                         +  L  K  KC+F  E+  FLG+ +  + +
Sbjct: 773 VNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKI 832

Query: 285 NVDQQKVEAVVNWERPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSD 344
              Q K  A+ ++  P +  + + FLG+  YYR FI + S++A           K +W++
Sbjct: 833 APLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICD--KSQWTE 892

Query: 345 KCEQSFQELKKRLVTTPILALSVTGKDYVIYCDASRLGLGCVLMQDGN------VIAYAS 379
           K +++ ++LK  L  +P+L       +Y +  DAS+ G+G VL +  N      V+ Y S
Sbjct: 893 KQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFS 952

[Close]

BLAST of Cmc08g0225891 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-48
Identity = 117/384 (30.47%), Postives = 187/384 (48.70%), Query Frame = 0


Query: 45  VVKEFLDVFPDDLSGLPPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDR 104
           +++  L   P D++ +P    ++  IE+  G       PY +     +E+   +Q+L+D 
Sbjct: 567 IIRNDLPPRPADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDN 626

Query: 105 GYIRPIVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALF 164
            +I P  SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLPRI++L  ++  A +F
Sbjct: 627 KFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIF 686

Query: 165 SKIDIRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGTSEDCST-------------- 224
           + +D+ SGYHQ+ +   D  KT F T  G YE+ VMPFG     ST              
Sbjct: 687 TTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRF 746

Query: 225 ------------------------------DSTLYAKFSKCEFWLEQVVFLGHVVSTKGV 284
                                         +  L  K  KC+F  E+  FLG+ +  + +
Sbjct: 747 VNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKI 806

Query: 285 NVDQQKVEAVVNWERPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSD 344
              Q K  A+ ++  P +  + + FLG+  YYR FI + S++A           K +W++
Sbjct: 807 APLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICD--KSQWTE 866

Query: 345 KCEQSFQELKKRLVTTPILALSVTGKDYVIYCDASRLGLGCVLMQDGN------VIAYAS 379
           K +++  +LK  L  +P+L       +Y +  DAS+ G+G VL +  N      V+ Y S
Sbjct: 867 KQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFS 926

[Close]

BLAST of Cmc08g0225891 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
           MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 542 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 601

Query: 61  PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
           PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 602 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 661

Query: 121 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
           VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 662 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 721

Query: 181 SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
           SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 722 SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 781

Query: 241 ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                           +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 782 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 841

Query: 301 RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
           RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 842 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 901

Query: 361 TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
           T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 902 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 961

[Close]

BLAST of Cmc08g0225891 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1    MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
            MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 580  MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 639

Query: 61   PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
            PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 640  PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 699

Query: 121  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
            VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 700  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 759

Query: 181  SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
            SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 760  SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 819

Query: 241  ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                            +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 820  RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 879

Query: 301  RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
            RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 880  RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 939

Query: 361  TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
            T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 940  TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 999

[Close]

BLAST of Cmc08g0225891 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1    MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
            MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 580  MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 639

Query: 61   PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
            PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 640  PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 699

Query: 121  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
            VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 700  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 759

Query: 181  SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
            SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 760  SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 819

Query: 241  ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                            +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 820  RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 879

Query: 301  RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
            RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 880  RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 939

Query: 361  TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
            T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 940  TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 999

[Close]

BLAST of Cmc08g0225891 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1    MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
            MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 791  MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 850

Query: 61   PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
            PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 851  PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 910

Query: 121  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
            VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 911  VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 970

Query: 181  SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
            SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 971  SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 1030

Query: 241  ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                            +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 1031 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 1090

Query: 301  RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
            RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 1091 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 1150

Query: 361  TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
            T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 1151 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 1210

[Close]

BLAST of Cmc08g0225891 vs. ExPASy TrEMBL
Match: A0A5A7VD61 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003310 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 348/426 (81.69%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1   MRKVVSRSLISVLKAEKLLRKGCTAFLAHILVVHREKLKLEDVPVVKEFLDVFPDDLSGL 60
           MRK VSRSLISVLKAEKLLRKGCTAFLAHI+VV REKLK EDVPVVKEFLDVFPDDLSGL
Sbjct: 542 MRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFPDDLSGL 601

Query: 61  PPNREIEFTIELLLGTTPISQAPYRMAPSELKELKMQLQELVDRGYIRPIVSPWGAPVLF 120
           PP+REIEFTIELL GT PISQAPYRMAPSELKELKMQLQELVD+GYIRP VSPWGAPVLF
Sbjct: 602 PPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLF 661

Query: 121 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRINDLFDQLRGAALFSKIDIRSGYHQLKVRE 180
           VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI+DLFDQLRGAALFSKID+RSGYHQLKVRE
Sbjct: 662 VKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRE 721

Query: 181 SDIAKTTFRTRYGHYEFRVMPFGTSE---------------------------------- 240
           SDIAKT FRTRYGHYEFRVMPFG +                                   
Sbjct: 722 SDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVD 781

Query: 241 ------------DCSTDSTLYAKFSKCEFWLEQVVFLGHVVSTKGVNVDQQKVEAVVNWE 300
                           +  LYAKFSKCEFWLEQVVFLGHVVS KGV+VD QKVEAVVNWE
Sbjct: 782 RESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWE 841

Query: 301 RPTSATEVRSFLGLAGYYRCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLV 360
           RP SATEVRSFLGLAGYYR FIEDFSRLAL  TALTRKN KFEWSDKCEQSFQELKKRLV
Sbjct: 842 RPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLV 901

Query: 361 TTPILALSVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 381
           T PILAL VTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV
Sbjct: 902 TAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAV 961

[Close]

BLAST of Cmc08g0225891 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.8e-19
Identity = 44/109 (40.37%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 215 YAKFSKCEFWLEQVVFLG--HVVSTKGVNVDQQKVEAVVNWERPTSATEVRSFLGLAGYY 274
           YA   KC F   Q+ +LG  H++S +GV+ D  K+EA+V W  P + TE+R FLGL GYY
Sbjct: 17  YANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYY 76

Query: 275 RCFIEDFSRLALTSTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILAL 322
           R F++++ ++    T L +KN+  +W++    +F+ LK  + T P+LAL
Sbjct: 77  RRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLAL 124

The following BLAST results are available for this feature:

BLAST of Cmc08g0225891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035455.1	3.2e-190	81.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
KAA0037582.1	3.2e-190	81.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK27507.1	3.2e-190	81.69	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0056684.1	3.2e-190	81.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0041108.1	3.2e-190	81.69	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0225891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	9.1e-55	34.33	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.9e-52	32.35	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10394	6.7e-50	31.41	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
Q7LHG5	7.4e-49	30.47	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	1.3e-48	30.47	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc08g0225891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	1.5e-190	81.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	1.5e-190	81.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.5e-190	81.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UNA3	1.5e-190	81.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73...	[more]
A0A5A7VD61	1.5e-190	81.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]

BLAST of Cmc08g0225891 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.8e-19	40.37	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 298..379 e-value: 2.7E-24 score: 85.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 146..173 e-value: 1.7E-55 score: 189.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 244..328 e-value: 2.5E-28 score: 99.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 67..206 e-value: 1.7E-55 score: 189.6
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 230..380
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 230..380
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 8..191
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 8..191
None	No IPR available	CDD	cd01647	RT_LTR	coord: 105..235 e-value: 7.63398E-55 score: 176.632
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 121..203 e-value: 4.5E-7 score: 29.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 45..379

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225891.1	Cmc08g0225891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding