Cmc08g0225881 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225881
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 17224889 .. 17225986 (-)
RNA-Seq Expression	Cmc08g0225881
Synteny	Cmc08g0225881

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAAGCGAGCTTAAGGAGCTGAAGGTGCAGTTGCAAGAATTAGTTGACAAGGGATACATCAGGCCTAATGTATCACCTTGGGGAGCTTCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTAAGATTATGCATTGACTACAAGCAGTTAAACAAGGTCATGATACGTAACAAGTACCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAAGGTAGCAGTAGTGTTCTCTAAGATTGATCTGAGATCAGGATACCATCAGTTGAAGGTTAGGGAATCAGATATTCCTAAAACAAGATTTAGAACGAGGTATGGGCACTATGAGTTTTTAGTAATGCCATTCGGTTTAATGAATGCGCCAGCAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATTCATGACATACTAGTTTACTCAATGGACAAAAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAAACACTGCGTGATAAACAACTATACGCCAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAATGTTGTTCTTAGGGCATGTGGTTTCAGCGGGCGGAGTTAGTGTTGATCCGCAGAAAGTGGAAGCTGTTGTCAATTGGGAGAGACCAGCCAGTGCAACAGAGGTACGTAGTTTCCTAGGCCTGGCCAGATACTACAGACGTTTTGTTGAGGATTTCTCACGATTAGCATTACCCTTGACAGCTCTAACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGTGAACAAAGTTTTCAGGAGCTGAAGAAGAGATTGGTGACAACACCTATTCTAACACTTCCTGTAACAGGAAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTGTGCGCTCATGCAGGAAGGGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAAGCATGAGTGTAGTTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTCTAGCACTAAAGATTTGGAGACATTATTTATTCGACGAGAAGTGCCACATTTTCACAGATCATAAAAGTCTGAAGTACATCTTGGATTAG

mRNA sequence

ATGGCTCCAAGCGAGCTTAAGGAGCTGAAGGTGCAGTTGCAAGAATTAGTTGACAAGGGATACATCAGGCCTAATGTATCACCTTGGGGAGCTTCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTAAGATTATGCATTGACTACAAGCAGTTAAACAAGGTCATGATACGTAACAAGTACCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAAGGTAGCAGTAGTGTTCTCTAAGATTGATCTGAGATCAGGATACCATCAGTTGAAGGTTAGGGAATCAGATATTCCTAAAACAAGATTTAGAACGAGGTATGGGCACTATGAGTTTTTAGTAATGCCATTCGGTTTAATGAATGCGCCAGCAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATTCATGACATACTAGTTTACTCAATGGACAAAAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAAACACTGCGTGATAAACAACTATACGCCAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAATGTTGTTCTTAGGGCATGTGGTTTCAGCGGGCGGAGTTAGTGTTGATCCGCAGAAAGTGGAAGCTGTTGTCAATTGGGAGAGACCAGCCAGTGCAACAGAGGTACGTAGTTTCCTAGGCCTGGCCAGATACTACAGACGTTTTGTTGAGGATTTCTCACGATTAGCATTACCCTTGACAGCTCTAACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGTGAACAAAGTTTTCAGGAGCTGAAGAAGAGATTGGTGACAACACCTATTCTAACACTTCCTGTAACAGGAAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTGTGCGCTCATGCAGGAAGGGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAAGCATGAGTGTAGTTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTCTAGCACTAAAGATTTGGAGACATTATTTATTCGACGAGAAGTGCCACATTTTCACAGATCATAAAAGTCTGAAGTACATCTTGGATTAG

Coding sequence (CDS)

ATGGCTCCAAGCGAGCTTAAGGAGCTGAAGGTGCAGTTGCAAGAATTAGTTGACAAGGGATACATCAGGCCTAATGTATCACCTTGGGGAGCTTCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTAAGATTATGCATTGACTACAAGCAGTTAAACAAGGTCATGATACGTAACAAGTACCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAAGGTAGCAGTAGTGTTCTCTAAGATTGATCTGAGATCAGGATACCATCAGTTGAAGGTTAGGGAATCAGATATTCCTAAAACAAGATTTAGAACGAGGTATGGGCACTATGAGTTTTTAGTAATGCCATTCGGTTTAATGAATGCGCCAGCAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATTCATGACATACTAGTTTACTCAATGGACAAAAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAAACACTGCGTGATAAACAACTATACGCCAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAATGTTGTTCTTAGGGCATGTGGTTTCAGCGGGCGGAGTTAGTGTTGATCCGCAGAAAGTGGAAGCTGTTGTCAATTGGGAGAGACCAGCCAGTGCAACAGAGGTACGTAGTTTCCTAGGCCTGGCCAGATACTACAGACGTTTTGTTGAGGATTTCTCACGATTAGCATTACCCTTGACAGCTCTAACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGTGAACAAAGTTTTCAGGAGCTGAAGAAGAGATTGGTGACAACACCTATTCTAACACTTCCTGTAACAGGAAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTGTGCGCTCATGCAGGAAGGGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAAGCATGAGTGTAGTTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTCTAGCACTAAAGATTTGGAGACATTATTTATTCGACGAGAAGTGCCACATTTTCACAGATCATAAAAGTCTGAAGTACATCTTGGATTAG

Protein sequence

MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNKYPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLMNAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGLGCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSLKYILD

Homology

[Close]

BLAST of Cmc08g0225881 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 685.3 bits (1767), Expect = 3.0e-193
Identity = 334/365 (91.51%), Postives = 348/365 (95.34%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELKVQLQELVDKGYIRP+VS WGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 839  MAPSELKELKVQLQELVDKGYIRPSVSLWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 898

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A+VFSKIDLRSGYHQLKVR+S+IPKT FRTRYGHYEFLVMPFGL 
Sbjct: 899  YPLPRIDDLFDQLRGAIVFSKIDLRSGYHQLKVRKSNIPKTAFRTRYGHYEFLVMPFGLT 958

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDL+NRIFHQYLDQFVIVFI DILVYSMDKKAHEEHLRIVLQ LRDKQLY KFS
Sbjct: 959  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSMDKKAHEEHLRIVLQILRDKQLYVKFS 1018

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWLNQ++FLGHVVSAGGVSVDPQKVE VVNWERPASATEVRSFLGLA YYRRFVEDF
Sbjct: 1019 KCEFWLNQVVFLGHVVSAGGVSVDPQKVEVVVNWERPASATEVRSFLGLAGYYRRFVEDF 1078

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            S+LALPLTALTRKNA+FEW DKCEQSFQELKKRLVT PILTLP++GKEYVIYCDASRQGL
Sbjct: 1079 SQLALPLTALTRKNAEFEWLDKCEQSFQELKKRLVTAPILTLPISGKEYVIYCDASRQGL 1138

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQEGKVIAYTSRQLKKHE +YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 1139 GCVLMQEGKVIAYTSRQLKKHEYNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1198

Query: 361  KYILD 366
            KYI D
Sbjct: 1199 KYIFD 1203

[Close]

BLAST of Cmc08g0225881 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 685.3 bits (1767), Expect = 3.0e-193
Identity = 334/365 (91.51%), Postives = 348/365 (95.34%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELKVQLQELVDKGYIRP+VS WGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 839  MAPSELKELKVQLQELVDKGYIRPSVSLWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 898

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A+VFSKIDLRSGYHQLKVR+S+IPKT FRTRYGHYEFLVMPFGL 
Sbjct: 899  YPLPRIDDLFDQLRGAIVFSKIDLRSGYHQLKVRKSNIPKTAFRTRYGHYEFLVMPFGLT 958

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDL+NRIFHQYLDQFVIVFI DILVYSMDKKAHEEHLRIVLQ LRDKQLY KFS
Sbjct: 959  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSMDKKAHEEHLRIVLQILRDKQLYVKFS 1018

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWLNQ++FLGHVVSAGGVSVDPQKVE VVNWERPASATEVRSFLGLA YYRRFVEDF
Sbjct: 1019 KCEFWLNQVVFLGHVVSAGGVSVDPQKVEVVVNWERPASATEVRSFLGLAGYYRRFVEDF 1078

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            S+LALPLTALTRKNA+FEW DKCEQSFQELKKRLVT PILTLP++GKEYVIYCDASRQGL
Sbjct: 1079 SQLALPLTALTRKNAEFEWLDKCEQSFQELKKRLVTAPILTLPISGKEYVIYCDASRQGL 1138

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQEGKVIAYTSRQLKKHE +YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 1139 GCVLMQEGKVIAYTSRQLKKHEYNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1198

Query: 361  KYILD 366
            KYI D
Sbjct: 1199 KYIFD 1203

[Close]

BLAST of Cmc08g0225881 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 672.2 bits (1733), Expect = 2.6e-189
Identity = 325/365 (89.04%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1   MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
           MAPSELKELK+QLQELVDKGYIRP+VSPWGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 326 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 385

Query: 61  YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
           YPLPRIDDLFDQL+ A +FSKIDLRSGYHQLKVRESDI KT FRTRYGHYEF VMPFGL 
Sbjct: 386 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 445

Query: 121 NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
           NAPAVFMDLMNRIFH+YLDQFVIVFI DILVYS+D+++HEEHLRIVLQTLR+KQLYAKFS
Sbjct: 446 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 505

Query: 181 KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
           KCEFWL Q++FLGHVVSA GVSVDPQKVEAVVNWERP SATEVRSFLGLA YYRRF+EDF
Sbjct: 506 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 565

Query: 241 SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVT PIL LPVTGK+YVIYCDASR GL
Sbjct: 566 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 625

Query: 301 GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
           GC LMQ+G VIAY SRQLK+HEC+YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 626 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 685

Query: 361 KYILD 366
           KYI D
Sbjct: 686 KYIFD 690

[Close]

BLAST of Cmc08g0225881 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 672.2 bits (1733), Expect = 2.6e-189
Identity = 325/365 (89.04%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELK+QLQELVDKGYIRP+VSPWGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A +FSKIDLRSGYHQLKVRESDI KT FRTRYGHYEF VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDLMNRIFH+YLDQFVIVFI DILVYS+D+++HEEHLRIVLQTLR+KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWL Q++FLGHVVSA GVSVDPQKVEAVVNWERP SATEVRSFLGLA YYRRF+EDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVT PIL LPVTGK+YVIYCDASR GL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQ+G VIAY SRQLK+HEC+YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYILD 366
            KYI D
Sbjct: 1025 KYIFD 1029

[Close]

BLAST of Cmc08g0225881 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 672.2 bits (1733), Expect = 2.6e-189
Identity = 325/365 (89.04%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELK+QLQELVDKGYIRP+VSPWGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A +FSKIDLRSGYHQLKVRESDI KT FRTRYGHYEF VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDLMNRIFH+YLDQFVIVFI DILVYS+D+++HEEHLRIVLQTLR+KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWL Q++FLGHVVSA GVSVDPQKVEAVVNWERP SATEVRSFLGLA YYRRF+EDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVT PIL LPVTGK+YVIYCDASR GL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQ+G VIAY SRQLK+HEC+YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYILD 366
            KYI D
Sbjct: 1025 KYIFD 1029

[Close]

BLAST of Cmc08g0225881 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.0e-71
Identity = 137/363 (37.74%), Postives = 221/363 (60.88%), Query Frame = 0


Query: 8   ELKVQLQELVDKGYIRPNVSPWGASVLFVKKKD-----GTLRLCIDYKQLNKVMIRNKYP 67
           E++ Q+QE++++G IR + SP+ +    V KK         R+ IDY++LN++ I ++YP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLMNA 127
           +P +D++  +L     F+ IDL  G+HQ+++ E  I KT F T+ GHYE+L MPFGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFSKC 187
           PA F   MN I    L++  +V++ DI+++S     H   +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDFSR 247
           EF   +  FLGH+V+  G+  +P KV+A+V++  P    E+R+FLGL  YYR+F+ +++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 LALPLTALTRKNAKFEWSDKCE--QSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 307
           +A P+T+  +K  K + + K E  ++F++LK  ++  PIL LP   K++V+  DAS   L
Sbjct: 461 IAKPMTSCLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLAL 520

Query: 308 GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 364
           G  L Q G  I++ SR L  HE +Y   + EL A+V A K +RHYL   +  I +DH+ L
Sbjct: 521 GAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPL 580

[Close]

BLAST of Cmc08g0225881 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.7e-71
Identity = 130/363 (35.81%), Postives = 221/363 (60.88%), Query Frame = 0


Query: 7   KELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGT-----LRLCIDYKQLNKVMIRNKY 66
           +E++ Q+Q+++++G IR + SP+ + +  V KK         R+ IDY++LN++ + +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLMN 126
           P+P +D++  +L     F+ IDL  G+HQ+++    + KT F T++GHYE+L MPFGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFSK 186
           APA F   MN I    L++  +V++ DI+V+S     H + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDFS 246
           CEF   +  FLGHV++  G+  +P+K+EA+  +  P    E+++FLGL  YYR+F+ +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RLALPLTALTRKNAKFEWSD-KCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 306
            +A P+T   +KN K + ++ + + +F++LK  +   PIL +P   K++ +  DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 364
           G  L Q+G  ++Y SR L +HE +Y T + EL A+V A K +RHYL      I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

[Close]

BLAST of Cmc08g0225881 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.6e-67
Identity = 144/378 (38.10%), Postives = 218/378 (57.67%), Query Frame = 0


Query: 8   ELKVQLQELVDKGYIRPNVSPWGASVLFVKKK-----DGTLRLCIDYKQLNKVMIRNKYP 67
           E++ Q+ EL+  G IRP+ SP+ + +  V KK     +   R+ +D+K+LN V I + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLMNA 127
           +P I+     L  A  F+ +DL SG+HQ+ ++ESDIPKT F T  G YEFL +PFGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFSKC 187
           PA+F  +++ I  +++ +   V+I DI+V+S D   H ++LR+VL +L    L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDFSR 247
            F   Q+ FLG++V+A G+  DP+KV A+     P S  E++ FLG+  YYR+F++D+++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 LALPLTALTR---KNAKFEWSDKCE--------QSFQELKKRLVTTPILTLPVTGKEYVI 307
           +A PLT LTR    N K   S K          QSF +LK  L ++ IL  P   K + +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YCDASRQGLGCALMQE----GKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLF 365
             DAS   +G  L Q+     + IAY SR L K E +Y T + E+ A++ +L   R YL+
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLY 497

[Close]

BLAST of Cmc08g0225881 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63
Identity = 124/367 (33.79%), Postives = 216/367 (58.86%), Query Frame = 0


Query: 1   MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
           + P +++ +  ++ + +  G IR + +     V+FV KK+GTLR+ +DYK LNK +  N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
           YPLP I+ L  +++ + +F+K+DL+S YH ++VR+ D  K  FR   G +E+LVMP+G+ 
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            APA F   +N I  +  +  V+ ++ DIL++S  +  H +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
           KCEF  +Q+ F+G+ +S  G +   + ++ V+ W++P +  E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
           S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K+ ++  DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCALMQEGK-----VIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFD--EKCHI 360
           G  L Q+        + Y S ++ K + +Y   D E+ A++ +LK WRHYL    E   I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc08g0225881 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63
Identity = 124/367 (33.79%), Postives = 216/367 (58.86%), Query Frame = 0


Query: 1   MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
           + P +++ +  ++ + +  G IR + +     V+FV KK+GTLR+ +DYK LNK +  N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
           YPLP I+ L  +++ + +F+K+DL+S YH ++VR+ D  K  FR   G +E+LVMP+G+ 
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            APA F   +N I  +  +  V+ ++ DIL++S  +  H +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
           KCEF  +Q+ F+G+ +S  G +   + ++ V+ W++P +  E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
           S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L      K+ ++  DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCALMQEGK-----VIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFD--EKCHI 360
           G  L Q+        + Y S ++ K + +Y   D E+ A++ +LK WRHYL    E   I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

[Close]

BLAST of Cmc08g0225881 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.4e-193
Identity = 334/365 (91.51%), Postives = 348/365 (95.34%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELKVQLQELVDKGYIRP+VS WGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 839  MAPSELKELKVQLQELVDKGYIRPSVSLWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 898

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A+VFSKIDLRSGYHQLKVR+S+IPKT FRTRYGHYEFLVMPFGL 
Sbjct: 899  YPLPRIDDLFDQLRGAIVFSKIDLRSGYHQLKVRKSNIPKTAFRTRYGHYEFLVMPFGLT 958

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDL+NRIFHQYLDQFVIVFI DILVYSMDKKAHEEHLRIVLQ LRDKQLY KFS
Sbjct: 959  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSMDKKAHEEHLRIVLQILRDKQLYVKFS 1018

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWLNQ++FLGHVVSAGGVSVDPQKVE VVNWERPASATEVRSFLGLA YYRRFVEDF
Sbjct: 1019 KCEFWLNQVVFLGHVVSAGGVSVDPQKVEVVVNWERPASATEVRSFLGLAGYYRRFVEDF 1078

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            S+LALPLTALTRKNA+FEW DKCEQSFQELKKRLVT PILTLP++GKEYVIYCDASRQGL
Sbjct: 1079 SQLALPLTALTRKNAEFEWLDKCEQSFQELKKRLVTAPILTLPISGKEYVIYCDASRQGL 1138

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQEGKVIAYTSRQLKKHE +YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 1139 GCVLMQEGKVIAYTSRQLKKHEYNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1198

Query: 361  KYILD 366
            KYI D
Sbjct: 1199 KYIFD 1203

[Close]

BLAST of Cmc08g0225881 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.4e-193
Identity = 334/365 (91.51%), Postives = 348/365 (95.34%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELKVQLQELVDKGYIRP+VS WGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 839  MAPSELKELKVQLQELVDKGYIRPSVSLWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 898

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A+VFSKIDLRSGYHQLKVR+S+IPKT FRTRYGHYEFLVMPFGL 
Sbjct: 899  YPLPRIDDLFDQLRGAIVFSKIDLRSGYHQLKVRKSNIPKTAFRTRYGHYEFLVMPFGLT 958

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDL+NRIFHQYLDQFVIVFI DILVYSMDKKAHEEHLRIVLQ LRDKQLY KFS
Sbjct: 959  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSMDKKAHEEHLRIVLQILRDKQLYVKFS 1018

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWLNQ++FLGHVVSAGGVSVDPQKVE VVNWERPASATEVRSFLGLA YYRRFVEDF
Sbjct: 1019 KCEFWLNQVVFLGHVVSAGGVSVDPQKVEVVVNWERPASATEVRSFLGLAGYYRRFVEDF 1078

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            S+LALPLTALTRKNA+FEW DKCEQSFQELKKRLVT PILTLP++GKEYVIYCDASRQGL
Sbjct: 1079 SQLALPLTALTRKNAEFEWLDKCEQSFQELKKRLVTAPILTLPISGKEYVIYCDASRQGL 1138

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQEGKVIAYTSRQLKKHE +YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 1139 GCVLMQEGKVIAYTSRQLKKHEYNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1198

Query: 361  KYILD 366
            KYI D
Sbjct: 1199 KYIFD 1203

[Close]

BLAST of Cmc08g0225881 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189
Identity = 325/365 (89.04%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1   MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
           MAPSELKELK+QLQELVDKGYIRP+VSPWGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 627 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61  YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
           YPLPRIDDLFDQL+ A +FSKIDLRSGYHQLKVRESDI KT FRTRYGHYEF VMPFGL 
Sbjct: 687 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121 NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
           NAPAVFMDLMNRIFH+YLDQFVIVFI DILVYS+D+++HEEHLRIVLQTLR+KQLYAKFS
Sbjct: 747 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181 KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
           KCEFWL Q++FLGHVVSA GVSVDPQKVEAVVNWERP SATEVRSFLGLA YYRRF+EDF
Sbjct: 807 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241 SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVT PIL LPVTGK+YVIYCDASR GL
Sbjct: 867 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301 GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
           GC LMQ+G VIAY SRQLK+HEC+YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 927 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 986

Query: 361 KYILD 366
           KYI D
Sbjct: 987 KYIFD 991

[Close]

BLAST of Cmc08g0225881 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189
Identity = 325/365 (89.04%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELK+QLQELVDKGYIRP+VSPWGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A +FSKIDLRSGYHQLKVRESDI KT FRTRYGHYEF VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDLMNRIFH+YLDQFVIVFI DILVYS+D+++HEEHLRIVLQTLR+KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWL Q++FLGHVVSA GVSVDPQKVEAVVNWERP SATEVRSFLGLA YYRRF+EDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVT PIL LPVTGK+YVIYCDASR GL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQ+G VIAY SRQLK+HEC+YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYILD 366
            KYI D
Sbjct: 1025 KYIFD 1029

[Close]

BLAST of Cmc08g0225881 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189
Identity = 325/365 (89.04%), Postives = 343/365 (93.97%), Query Frame = 0


Query: 1    MAPSELKELKVQLQELVDKGYIRPNVSPWGASVLFVKKKDGTLRLCIDYKQLNKVMIRNK 60
            MAPSELKELK+QLQELVDKGYIRP+VSPWGA VLFVKKKDGTLRLCIDY+QLNKV IRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLKVAVVFSKIDLRSGYHQLKVRESDIPKTRFRTRYGHYEFLVMPFGLM 120
            YPLPRIDDLFDQL+ A +FSKIDLRSGYHQLKVRESDI KT FRTRYGHYEF VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHQYLDQFVIVFIHDILVYSMDKKAHEEHLRIVLQTLRDKQLYAKFS 180
            NAPAVFMDLMNRIFH+YLDQFVIVFI DILVYS+D+++HEEHLRIVLQTLR+KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLNQMLFLGHVVSAGGVSVDPQKVEAVVNWERPASATEVRSFLGLARYYRRFVEDF 240
            KCEFWL Q++FLGHVVSA GVSVDPQKVEAVVNWERP SATEVRSFLGLA YYRRF+EDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPILTLPVTGKEYVIYCDASRQGL 300
            SRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVT PIL LPVTGK+YVIYCDASR GL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCALMQEGKVIAYTSRQLKKHECSYPTHDLELAAVVLALKIWRHYLFDEKCHIFTDHKSL 360
            GC LMQ+G VIAY SRQLK+HEC+YPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYILD 366
            KYI D
Sbjct: 1025 KYIFD 1029

[Close]

BLAST of Cmc08g0225881 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 7.4e-25
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 162 HLRIVLQTLRDKQLYAKFSKCEFWLNQMLFLG--HVVSAGGVSVDPQKVEAVVNWERPAS 221
           HL +VLQ     Q YA   KC F   Q+ +LG  H++S  GVS DP K+EA+V W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 ATEVRSFLGLARYYRRFVEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTTPI 281
            TE+R FLGL  YYRRFV+++ ++  PLT L +KN+  +W++    +F+ LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTLP 284
           L LP
Sbjct: 123 LALP 125

The following BLAST results are available for this feature:

BLAST of Cmc08g0225881 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037581.1	3.0e-193	91.51	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	3.0e-193	91.51	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0050527.1	2.6e-189	89.04	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	2.6e-189	89.04	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	2.6e-189	89.04	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]

BLAST of Cmc08g0225881 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.0e-71	37.74	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	8.7e-71	35.81	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	7.6e-67	38.10	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	1.3e-63	33.79	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-63	33.79	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0225881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTP3	1.4e-193	91.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T7M6	1.4e-193	91.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7U2V7	1.3e-189	89.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	1.3e-189	89.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.3e-189	89.04	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]

BLAST of Cmc08g0225881 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	7.4e-25	44.35	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 6.7E-79 score: 266.1
None	No IPR available	GENE3D	3.10.20.370		coord: 288..354 e-value: 1.8E-5 score: 26.6
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..363
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..363
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..365 e-value: 1.00587E-29 score: 108.734
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 4.98918E-87 score: 258.679
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 259..353 e-value: 6.8E-29 score: 99.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 3.6E-24 score: 85.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.806974
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..287 e-value: 2.7E-30 score: 106.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 6.7E-79 score: 266.1
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225881.1	Cmc08g0225881.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding