Cmc08g0225701 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225701
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	UPF0261 protein
Location	CMiso1.1chr08: 17011561 .. 17014435 (-)
RNA-Seq Expression	Cmc08g0225701
Synteny	Cmc08g0225701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTCCTTTGAAATCTTCTAACCCTAATCAAAATTTCTTGCTTTCATTTCCTATCATCGTAGATTCTTTTTTCCATCAACGATTTGAAGATTTACTATGGCCGGTAAAGGAGAAGGTCCGGCGATCGGAATCGATCTTGGAACCACGTACTTTTGAACCAGCTGTATCACCTTCTTTTGAACCAGCTTTTGAGAATGATGATTTCTTCGCAGTTTTATAATATTCTGATGATGCTTTCTTTCTTTCTACTAGGTTGAGGACGAAGACGAAGACAAATCAGACGATGCAGATGACTCCGATGCAGAGGCAGATTTGGACAAAAAGGACAAGGAAGAAGACGACAAACATGATGAACTGTAAGGGAGAAGAGGTGGAGTTTCATTAGAAGAAAATTTTCCCCTTTTTTTCCACCTTTTGTTTTTTGTTTTTTATTATTTTTCTAGGTGTAGTAGTATTATCCGTTGGAGAAAAAGAAACAGTCTTCTTGATTTGCATTTTACGCATGAATGAATGACTGGATTTGCTTAAATTTCAGTTTGAGTTTGAGCCTTTAGGAAAAGAGATTTAAGAAAGAATTAGTAACAATTTGATGAATCAAATGAATGGGGTTCCCCTTCCTATACTGGATTTTAAATTGAATTCTCTTACATAGAAGAATTCAATCTTTTTTACTCTTATTTGGATCCCAAATTTATAAATTTCATCTCTCAATATCATCATAATTGGACTGGACTTGCTGAGTTGAGTAATCTGTGTGATCTGCAGTTTAAAAGCACTTTTTGTTTTCTTTAGCAATTTATTTTATTTAACAAAACTACTTTTTGTGCCATGTTCTCTTCTTCCTTTTTTTTTTTTTTTAAGAGTTTGAAAAAGGCAATGGAAAATGGAAGCGTTTAAAATATTTCTCAACCTCTATTCTTTGAAATTAATGGGGAGAGTATAAAAGGGGAATGTAACCGGCGAGGAAAAACGTTTTAGAAGGGTACCTAAGCCTAATTTAGGATATGCGAAAGAGGTCATATGCTTGTTTGGGAATATTCCAAGGACGTTTGATATTTTTCATTGATATTGTTTTCAATTAAACTGTTTGTCAGAATGTTTTGCTAACAAAGTAGGTATCAAACACAGCTTGAAAGAAAAAGAAAAGTTGATTGAAGTCTACTTTATTAGTGTTATCCTATCCTCCTAAGAGGGGAAAGATTTTAAGACTTTCTAATGATGGCGTGGGTACAAGAGGGTTGTCATTGTCGCCCTCACTTAAATTGGATAATGAAATTTTATGTTGCATTTCCTTGTACCGGGTTGGAATTGTGGTTTTAACTTTGATTATTTGAACTATCGGAGCTATAGCTAAACGATGTTAATTCGATCTTCAAATTTGTATCATTCTCACTTTATCTGGCTGTAAACAGGATCTTTGTTGTTGATTAATGATTCTCTTCGTTTTGTTTGTATTCGCTGTGTGTGGTTACGGAAATGACAGGTTGAAGTTACGATTGTTGATGTTTCTACCAGTCATCAGATTGGGATCGACAGTTTGGAGAACAGAAAAATTGCTCATTTTATAGCTGATAAGATCAACAATTCATCAGCGAAGGTTCGTGTTTGCCTGCCACGGAATGGTGTATCTGCTCTGGATGCACCAGCGAAGTCATTTTATGATCCTGAGGCTACTGCTACTCTTATAGAGGAACTACAGAAAGCAATTCAGTTAAATAATGATAGGCAGGTACTCGTAAAGTTATTATTATCGAGTTCTTCTCTTTGTTGACTGATCCCCATCTTTGTGTTGTAAAGCTTAAACCTCTTTATGATACAGGTGAAGGTATATCCTTATCATATTAATGATCCTGAGTTCGCTGAGTTCGGGGTGGTTTCGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTGCCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTGTAAGTTCTATCTTCTATGTACCTGCTGATTCACAAAGTTAATTCTAGGAATTGTATCTACAAATTTTGGATCGACGCTTTGCAAGCATACAATTTTGAAGAATAAATTGTATAAATATAGTTCTGTATGTATGAACATTGGAAGTAATGTTGTGTTTCCTAGAAGTGAAATCTGTTTATCGATAAAGTAGAAGTAGAGACTTAAAATGATTTTTCTAGTCAAGCATTGTGATAGACCCGGTGGAAGTAGAGATCTTGAATGTAGAGAATTAGGTATATCAGTAGATTATTTGGGAAGTCTCCAGCTAACCTGAGTGAGAGATGTTAACCTCTTTGATTTGTCTAGTTTGTACATTTGAAGTGTACTCGTCTTAATTTCCTGAATATTTTAAACTCTTTTGGACCCAAGAACAGAGCGGTATTCTGAATGTTGTCTATATTTTTTTTACATTAGATGTCATATCATATGTTACTGTTTTCTTTGGTTTTGCATTCTTAATCCTGATGAATATAAAACTTGTGTCATATAAATATATATATGGATTGGGGTGTGGATATAAAATCTTAAGAACTTTTCATCCTTCTCTGCAATTTCAATACTTCAAACAGCTTTGTTATTCATATAAATGGTTTATTTGGATATTGTTTGTAGATAATTGAAGTGATATTGGGTTGAAAGCTAAGCGATTGTGTAGAAATGGCCAAGCGACCGTTGAAAATTGAAGACTGAGAAGGCATTTTGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTTTCATGTACTATTGTAGAATGTATATATAAACATAATATTAATATTTTATTTTGTGTATTCAAGTGTAAAAGACAAATGTCATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGACGTGTGA

mRNA sequence

CTTCCTCCTTTGAAATCTTCTAACCCTAATCAAAATTTCTTGCTTTCATTTCCTATCATCGTAGATTCTTTTTTCCATCAACGATTTGAAGATTTACTATGGCCGGTAAAGGAGAAGGTCCGGCGATCGGAATCGATCTTGGAACCACGTACTTTTGAACCAGCTGTTGAGGACGAAGACGAAGACAAATCAGACGATGCAGATGACTCCGATGCAGAGGCAGATTTGGACAAAAAGGACAAGGAAGAAGACGACAAACATGATGAACTGTAAGGGAGAAGAGGTTGAAGTTACGATTGTTGATGTTTCTACCAGTCATCAGATTGGGATCGACAGTTTGGAGAACAGAAAAATTGCTCATTTTATAGCTGATAAGATCAACAATTCATCAGCGAAGGTTCGTGTTTGCCTGCCACGGAATGGTGTATCTGCTCTGGATGCACCAGCGAAGTCATTTTATGATCCTGAGGCTACTGCTACTCTTATAGAGGAACTACAGAAAGCAATTCAGTTAAATAATGATAGGCAGGTGAAGGTATATCCTTATCATATTAATGATCCTGAGTTCGCTGAGTTCGGGGTGGTTTCGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTGCCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTATAATTGAAGTGATATTGGGTTGAAAGCTAAGCGATTGTGTAGAAATGGCCAAGCGACCGTTGAAAATTGAAGACTGAGAAGGCATTTTGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTTTCATGTACTATTGTAGAATGTATATATAAACATAATATTAATATTTTATTTTGTGTATTCAAGTGTAAAAGACAAATGTCATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGACGTGTGA

Coding sequence (CDS)

ATGCAGATGACTCCGATGCAGAGGCAGATTTGGACAAAAAGGACAAGGAAGAAGACGACAAACATGATGAACTGTAAGGGAGAAGAGGTTGAAGTTACGATTGTTGATGTTTCTACCAGTCATCAGATTGGGATCGACAGTTTGGAGAACAGAAAAATTGCTCATTTTATAGCTGATAAGATCAACAATTCATCAGCGAAGGTTCGTGTTTGCCTGCCACGGAATGGTGTATCTGCTCTGGATGCACCAGCGAAGTCATTTTATGATCCTGAGGCTACTGCTACTCTTATAGAGGAACTACAGAAAGCAATTCAGTTAAATAATGATAGGCAGGTGAAGGTATATCCTTATCATATTAATGATCCTGAGTTCGCTGAGTTCGGGGTGGTTTCGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTGCCTTTTGCCGATGCTAA

Protein sequence

MQMTPMQRQIWTKRTRKKTTNMMNCKGEEVEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAEFGVVSHGWKGFFSRFAAFCRC

Homology

[Close]

BLAST of Cmc08g0225701 vs. NCBI nr
Match: KAA0032386.1 (TIM-barrel signal transduction protein isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.4e-45
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 29  EVEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFY 88
           +VEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAP KSFY
Sbjct: 250 KVEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPVKSFY 309

Query: 89  DPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAE 127
           DPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAE
Sbjct: 310 DPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAE 347

[Close]

BLAST of Cmc08g0225701 vs. NCBI nr
Match: TYK12597.1 (UPF0261 protein [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 6.6e-35
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAP KSFYDPEATATLIEELQKAIQLNN
Sbjct: 341 ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPGKSFYDPEATATLIEELQKAIQLNN 400

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 401 DRQVKVYPYHINDPEFAE 418

[Close]

BLAST of Cmc08g0225701 vs. NCBI nr
Match: KAA0025722.1 (UPF0261 protein [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 6.6e-35
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAP KSFYDPEATATLIEELQKAIQLNN
Sbjct: 341 ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPGKSFYDPEATATLIEELQKAIQLNN 400

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 401 DRQVKVYPYHINDPEFAE 418

[Close]

BLAST of Cmc08g0225701 vs. NCBI nr
Match: XP_004149991.2 (uncharacterized protein LOC101205995 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 3.6e-33
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIAHFIADKINNSSAKVRVCLP+NGVSALDA  KSFYDPEATATLIEELQ+AIQLNN
Sbjct: 470 ENRKIAHFIADKINNSSAKVRVCLPQNGVSALDAQGKSFYDPEATATLIEELQRAIQLNN 529

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 530 DRQVKVYPYHINDPEFAE 547

[Close]

BLAST of Cmc08g0225701 vs. NCBI nr
Match: KAE8647594.1 (hypothetical protein Csa_003735 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 3.6e-33
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIAHFIADKINNSSAKVRVCLP+NGVSALDA  KSFYDPEATATLIEELQ+AIQLNN
Sbjct: 342 ENRKIAHFIADKINNSSAKVRVCLPQNGVSALDAQGKSFYDPEATATLIEELQRAIQLNN 401

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 402 DRQVKVYPYHINDPEFAE 419

[Close]

BLAST of Cmc08g0225701 vs. ExPASy Swiss-Prot
Match: A7M6E8 (ToMV susceptible protein tm-1(GCR26) OS=Solanum lycopersicum OX=4081 GN=tm-1 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21
Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           EN+K A FIA+K+N +S+ V VCLP  GVSALDAP K FYDPEAT+ L  ELQ  ++ N 
Sbjct: 342 ENKKFAAFIAEKLNKASSSVCVCLPEKGVSALDAPGKDFYDPEATSCLTHELQMLLENNE 401

Query: 109 DRQVKVYPYHINDPEFA 126
             QVKVYPYHIND EFA
Sbjct: 402 RCQVKVYPYHINDVEFA 418

[Close]

BLAST of Cmc08g0225701 vs. ExPASy Swiss-Prot
Match: A7M6E7 (ToMV resistance protein Tm-1(GCR237) OS=Solanum lycopersicum OX=4081 GN=Tm-1 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 49/77 (63.64%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           EN+K A FIA+K+N +S+ V VCLP  GVSALDAP K FYDPEAT+ L  ELQ  ++ N 
Sbjct: 342 ENKKFAAFIAEKLNKASSSVCVCLPEKGVSALDAPGKDFYDPEATSCLTRELQMLLENNE 401

Query: 109 DRQVKVYPYHINDPEFA 126
             QVKV PYHIND EFA
Sbjct: 402 RCQVKVLPYHINDAEFA 418

[Close]

BLAST of Cmc08g0225701 vs. ExPASy Swiss-Prot
Match: A8GL43 (UPF0261 protein Spro_4740 OS=Serratia proteamaculans (strain 568) OX=399741 GN=Spro_4740 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           EN  I  +I +K+N  S +VR  +P  GVSALDAP + F+DP+A A  ++ L+  ++  N
Sbjct: 315 ENASIGRWIGEKMNACSGEVRFVIPGGGVSALDAPGQPFWDPQALAAFMQALESTLRPTN 374

Query: 109 DRQVKVYPYHINDPEFA 126
            R++    YHINDP FA
Sbjct: 375 KRRLIKTAYHINDPRFA 391

[Close]

BLAST of Cmc08g0225701 vs. ExPASy Swiss-Prot
Match: A4FLF6 (UPF0261 protein SACE_5696 OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) OX=405948 GN=SACE_5696 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.8e-12
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           E R+I  FIA K+N     VR  LP  GVS LDAP + F+DP+A   L E L+  ++ + 
Sbjct: 313 ECREIGSFIAAKLNACRGPVRFLLPEGGVSLLDAPGQPFHDPDADGVLFEVLESELRQDG 372

Query: 109 DRQVKVYPYHINDPEFAE 127
           DR++   P++INDP FA+
Sbjct: 373 DRRIVRVPHNINDPAFAD 390

[Close]

BLAST of Cmc08g0225701 vs. ExPASy Swiss-Prot
Match: P55606 (UPF0261 protein y4oU OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a02150 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.2e-12
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           E  +I  +IA+++N     VR  +P  GVSA+DAP + F+DPEA + L   L++ ++   
Sbjct: 312 ECNRIGEWIAERLNLCEGTVRFLIPELGVSAIDAPGQPFHDPEADSALFAALERTLRRTT 371

Query: 109 DRQVKVYPYHINDPEFAEFGVVS 132
            RQ+   P HINDP+FAE  V +
Sbjct: 372 KRQLIRVPLHINDPQFAELLVTN 394

[Close]

BLAST of Cmc08g0225701 vs. ExPASy TrEMBL
Match: A0A5A7SQS0 (TIM-barrel signal transduction protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002600 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.2e-45
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 29  EVEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFY 88
           +VEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAP KSFY
Sbjct: 250 KVEVTIVDVSTSHQIGIDSLENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPVKSFY 309

Query: 89  DPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAE 127
           DPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAE
Sbjct: 310 DPEATATLIEELQKAIQLNNDRQVKVYPYHINDPEFAE 347

[Close]

BLAST of Cmc08g0225701 vs. ExPASy TrEMBL
Match: A0A5D3CKY2 (UPF0261 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001810 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.2e-35
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAP KSFYDPEATATLIEELQKAIQLNN
Sbjct: 341 ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPGKSFYDPEATATLIEELQKAIQLNN 400

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 401 DRQVKVYPYHINDPEFAE 418

[Close]

BLAST of Cmc08g0225701 vs. ExPASy TrEMBL
Match: A0A5A7SKR1 (UPF0261 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002200 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.2e-35
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAP KSFYDPEATATLIEELQKAIQLNN
Sbjct: 341 ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPGKSFYDPEATATLIEELQKAIQLNN 400

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 401 DRQVKVYPYHINDPEFAE 418

[Close]

BLAST of Cmc08g0225701 vs. ExPASy TrEMBL
Match: A0A5A7VA93 (UPF0261 protein y4oU OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00780 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-33
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIA+FIADKINNS AKVRVCLPRNGVSALDAP KSFYDP+ATATLIEELQKAIQLNN
Sbjct: 351 ENRKIAYFIADKINNSLAKVRVCLPRNGVSALDAPGKSFYDPKATATLIEELQKAIQLNN 410

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 411 DRQVKVYPYHINDPEFAE 428

[Close]

BLAST of Cmc08g0225701 vs. ExPASy TrEMBL
Match: A0A5D3CVR2 (UPF0261 protein BPP1817-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3068G00020 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-33
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           ENRKIA+FIADKINNS AKVRVCLPRNGVSALDAP KSFYDP+ATATLIEELQKAIQLNN
Sbjct: 316 ENRKIAYFIADKINNSLAKVRVCLPRNGVSALDAPGKSFYDPKATATLIEELQKAIQLNN 375

Query: 109 DRQVKVYPYHINDPEFAE 127
           DRQVKVYPYHINDPEFAE
Sbjct: 376 DRQVKVYPYHINDPEFAE 393

[Close]

BLAST of Cmc08g0225701 vs. TAIR 10
Match: AT5G66420.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26
Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           EN+K A FIADK+N S++KVRVC+P  G+SALDAP K F DPEAT  LI ELQ  IQ N+
Sbjct: 244 ENKKFARFIADKLNKSTSKVRVCIPEKGLSALDAPGKPFCDPEATGALINELQGLIQTND 303

Query: 109 DRQVKVYPYHINDPEFAEFGVVS 132
           DRQV +Y +HINDPEFAE  V S
Sbjct: 304 DRQVNIYSHHINDPEFAEALVAS 326

[Close]

BLAST of Cmc08g0225701 vs. TAIR 10
Match: AT5G66420.2 (LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26
Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 49  ENRKIAHFIADKINNSSAKVRVCLPRNGVSALDAPAKSFYDPEATATLIEELQKAIQLNN 108
           EN+K A FIADK+N S++KVRVC+P  G+SALDAP K F DPEAT  LI ELQ  IQ N+
Sbjct: 343 ENKKFARFIADKLNKSTSKVRVCIPEKGLSALDAPGKPFCDPEATGALINELQGLIQTND 402

Query: 109 DRQVKVYPYHINDPEFAEFGVVS 132
           DRQV +Y +HINDPEFAE  V S
Sbjct: 403 DRQVNIYSHHINDPEFAEALVAS 425

The following BLAST results are available for this feature:

BLAST of Cmc08g0225701 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032386.1	2.4e-45	97.96	TIM-barrel signal transduction protein isoform 1 [Cucumis melo var. makuwa]	[more]
TYK12597.1	6.6e-35	98.72	UPF0261 protein [Cucumis melo var. makuwa]	[more]
KAA0025722.1	6.6e-35	98.72	UPF0261 protein [Cucumis melo var. makuwa]	[more]
XP_004149991.2	3.6e-33	94.87	uncharacterized protein LOC101205995 [Cucumis sativus]	[more]
KAE8647594.1	3.6e-33	94.87	hypothetical protein Csa_003735 [Cucumis sativus]	[more]

BLAST of Cmc08g0225701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7M6E8	1.9e-21	64.94	ToMV susceptible protein tm-1(GCR26) OS=Solanum lycopersicum OX=4081 GN=tm-1 PE=...	[more]
A7M6E7	1.3e-20	63.64	ToMV resistance protein Tm-1(GCR237) OS=Solanum lycopersicum OX=4081 GN=Tm-1 PE=...	[more]
A8GL43	2.8e-12	44.16	UPF0261 protein Spro_4740 OS=Serratia proteamaculans (strain 568) OX=399741 GN=S...	[more]
A4FLF6	4.8e-12	44.87	UPF0261 protein SACE_5696 OS=Saccharopolyspora erythraea (strain ATCC 11635 / DS...	[more]
P55606	8.2e-12	40.96	UPF0261 protein y4oU OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=39...	[more]

BLAST of Cmc08g0225701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQS0	1.2e-45	97.96	TIM-barrel signal transduction protein isoform 1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3CKY2	3.2e-35	98.72	UPF0261 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0018...	[more]
A0A5A7SKR1	3.2e-35	98.72	UPF0261 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G0022...	[more]
A0A5A7VA93	2.3e-33	94.87	UPF0261 protein y4oU OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548...	[more]
A0A5D3CVR2	2.3e-33	94.87	UPF0261 protein BPP1817-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cmc08g0225701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66420.1	4.6e-26	66.27	CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPr...	[more]
AT5G66420.2	4.6e-26	66.27	LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRE...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044122	UPF0261 domain	PFAM	PF06792	UPF0261	coord: 46..127 e-value: 2.2E-21 score: 76.3
None	No IPR available	GENE3D	3.40.50.12030	Uncharacterised protein family UPF0261, NC domain	coord: 15..132 e-value: 6.1E-24 score: 86.3
None	No IPR available	PANTHER	PTHR31862	UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120)	coord: 49..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225701.1	Cmc08g0225701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901135	carbohydrate derivative metabolic process
biological_process	GO:0006457	protein folding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140662	ATP-dependent protein folding chaperone
molecular_function	GO:0003824	catalytic activity