Cmc08g0225671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	PHD finger protein ALFIN-LIKE 3-like
Location	CMiso1.1chr08: 16983772 .. 16984175 (-)
RNA-Seq Expression	Cmc08g0225671
Synteny	Cmc08g0225671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGCAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGGTATGTGTATCATGATCTTCATTTTTTCAGTTGACACTTTTTGATGTGATGTAATTTACTGTGTTGATTACTCGGATTGGTTACATATTCTATCTTTCAAGAATTTTCAGAGTGAAGCTGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGAAAGAGGTAGAGACGTATGAAGAAGATAAAGACGAGCACAGTGACATCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGTTGTGATATCTATGAGAAATGGTTCCATGGGAAATTTGTTGTATGA

mRNA sequence

ATGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGCAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAGTGAAGCTGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGAAAGAGGTAGAGACGTATGAAGAAGATAAAGACGAGCACAGTGACATCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGTTGTGATATCTATGAGAAATGGTTCCATGGGAAATTTGTTGTATGA

Coding sequence (CDS)

ATGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGCAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAGTGAAGCTGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGAAAGAGGTAGAGACGTATGAAGAAGATAAAGACGAGCACAGTGACATCTTATGTAGGGCATGCGGTGAGAACTATGCTTCAGATGAATTTTGGATTTGTTGTGATATCTATGAGAAATGGTTCCATGGGAAATTTGTTGTATGA

Protein sequence

MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV

Homology

[Close]

BLAST of Cmc08g0225671 vs. NCBI nr
Match: KAA0067842.1 (PHD finger protein ALFIN-LIKE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 5.5e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60
           MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK
Sbjct: 37  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 96

Query: 61  DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 98
           DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Sbjct: 97  DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 133

[Close]

BLAST of Cmc08g0225671 vs. NCBI nr
Match: XP_016903323.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 5.5e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60
          MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK
Sbjct: 1  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60

Query: 61 DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 98
          DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Sbjct: 61 DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 97

[Close]

BLAST of Cmc08g0225671 vs. NCBI nr
Match: XP_004141692.1 (PHD finger protein ALFIN-LIKE 3 [Cucumis sativus] >KGN45504.1 hypothetical protein Csa_016627 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.6e-35
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVET-YEED 60
           +PTVFEVVT IAK+QVKEKSSTANGSKSKSSFKS EAEMQG  ARQSQAR+EVET YEED
Sbjct: 130 LPTVFEVVTGIAKKQVKEKSSTANGSKSKSSFKSREAEMQGMYARQSQAREEVETLYEED 189

Query: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           +DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 190 EDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. NCBI nr
Match: XP_008462331.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo] >KAA0059412.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa] >TYK03915.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 8.2e-34
Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVET-YEED 60
           +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS EA+ QG  ARQSQAR+EVET YEED
Sbjct: 130 LPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSREADAQGMYARQSQAREEVETLYEED 189

Query: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           +DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 190 EDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. NCBI nr
Match: XP_008462330.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 80/100 (80.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSS---EAEMQGTCARQSQARKEVET-Y 60
           +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS+   EA+ QG  ARQSQAR+EVET Y
Sbjct: 130 LPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSNFQREADAQGMYARQSQAREEVETLY 189

Query: 61  EEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           EED+DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 190 EEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 229

[Close]

BLAST of Cmc08g0225671 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.6e-18
Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTA--NGSKSKSSFKSSEAEMQGTCARQSQARKE------ 60
           +PTV+EVVT  A++Q KE  S+A  NG++SKS+ K    E + +    ++  +E      
Sbjct: 131 VPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAKDEEEGLELEE 190

Query: 61  -VETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
             E  +ED+DEH + LC ACG+NYASDEFWICCD+ EKWFHG+ V
Sbjct: 191 GEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECV 235

[Close]

BLAST of Cmc08g0225671 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.6e-18
Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60
           +PT+FEVVT +AK + K  ++  NG+KSKS+ K   +E + +  +Q +   E E  E+D+
Sbjct: 131 VPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEEDE-EIDEDDE 190

Query: 61  DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           D+H + LC ACG++  +DEFWICCD+ EKWFHGK V
Sbjct: 191 DDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCV 225

[Close]

BLAST of Cmc08g0225671 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17
Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGS--KSKSSFK---SSEAEMQGTCARQSQARKEVET 60
           +PT+FEVV   AK+Q K+KSS +N S  +SKSS K    S A+      +  +  +E   
Sbjct: 130 LPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKDDEEEEEEGV 189

Query: 61  YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
            EED+DE  +  C ACGE+YA+DEFWICCD+ E WFHGK V
Sbjct: 190 EEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCV 230

[Close]

BLAST of Cmc08g0225671 vs. ExPASy Swiss-Prot
Match: Q8LA16 (PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=AL7 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSS-FKSSEAEMQGTCARQS-QARKEVETYEE 60
           +PT+FEVVT  AKQ  K++S+  N S+SKSS  K   +E     ++ S   RKE E+ +E
Sbjct: 130 LPTIFEVVTGNAKQS-KDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDE 189

Query: 61  DKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           D+D+    +C ACG+NY  DEFWICCD  EKWFHGK V
Sbjct: 190 DEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. ExPASy Swiss-Prot
Match: Q40359 (PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKS--KSSFKSSEAEMQGTCARQS-QARKEVETYE 60
           +PTVFE+ T  AKQ   + ++  NGS S  KSS KS ++E Q    + S   ++EV++ E
Sbjct: 131 LPTVFELATGTAKQSKDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMSAPVKEEVDSGE 190

Query: 61  EDK--DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           E++  D+     C ACG+NY +DEFWICCD+ EKWFHGK V
Sbjct: 191 EEEEDDDEQGATCGACGDNYGTDEFWICCDMCEKWFHGKCV 231

[Close]

BLAST of Cmc08g0225671 vs. ExPASy TrEMBL
Match: A0A5A7VHJ0 (PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00500 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60
           MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK
Sbjct: 37  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 96

Query: 61  DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 98
           DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Sbjct: 97  DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 133

[Close]

BLAST of Cmc08g0225671 vs. ExPASy TrEMBL
Match: A0A1S4E514 (PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60
          MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK
Sbjct: 1  MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60

Query: 61 DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 98
          DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV
Sbjct: 61 DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFVV 97

[Close]

BLAST of Cmc08g0225671 vs. ExPASy TrEMBL
Match: A0A0A0K9L1 (PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 83/97 (85.57%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVET-YEED 60
           +PTVFEVVT IAK+QVKEKSSTANGSKSKSSFKS EAEMQG  ARQSQAR+EVET YEED
Sbjct: 130 LPTVFEVVTGIAKKQVKEKSSTANGSKSKSSFKSREAEMQGMYARQSQAREEVETLYEED 189

Query: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           +DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 190 EDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. ExPASy TrEMBL
Match: A0A5D3BXQ0 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001120 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34
Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVET-YEED 60
           +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS EA+ QG  ARQSQAR+EVET YEED
Sbjct: 130 LPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSREADAQGMYARQSQAREEVETLYEED 189

Query: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           +DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 190 EDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. ExPASy TrEMBL
Match: A0A1S3CGR0 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34
Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVET-YEED 60
           +PTVFEVVT IAK+QVKEKSS+ANGSKSKSSFKS EA+ QG  ARQSQAR+EVET YEED
Sbjct: 130 LPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKSREADAQGMYARQSQAREEVETLYEED 189

Query: 61  KDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           +DEH D LC ACGENYASDEFWICCDI EKWFHGK V
Sbjct: 190 EDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTA--NGSKSKSSFKSSEAEMQGTCARQSQARKE------ 60
           +PTV+EVVT  A++Q KE  S+A  NG++SKS+ K    E + +    ++  +E      
Sbjct: 131 VPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAKDEEEGLELEE 190

Query: 61  -VETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
             E  +ED+DEH + LC ACG+NYASDEFWICCD+ EKWFHG+ V
Sbjct: 191 GEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECV 235

[Close]

BLAST of Cmc08g0225671 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 90.9 bits (224), Expect = 6.1e-19
Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKSSEAEMQGTCARQSQARKEVETYEEDK 60
           +PT+FEVVT +AK + K  ++  NG+KSKS+ K   +E + +  +Q +   E E  E+D+
Sbjct: 131 VPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEEDE-EIDEDDE 190

Query: 61  DEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           D+H + LC ACG++  +DEFWICCD+ EKWFHGK V
Sbjct: 191 DDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCV 225

[Close]

BLAST of Cmc08g0225671 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-18
Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGS--KSKSSFK---SSEAEMQGTCARQSQARKEVET 60
           +PT+FEVV   AK+Q K+KSS +N S  +SKSS K    S A+      +  +  +E   
Sbjct: 130 LPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKDDEEEEEEGV 189

Query: 61  YEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
            EED+DE  +  C ACGE+YA+DEFWICCD+ E WFHGK V
Sbjct: 190 EEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCV 230

[Close]

BLAST of Cmc08g0225671 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 )

HSP 1 Score: 87.0 bits (214), Expect = 8.8e-18
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSS-FKSSEAEMQGTCARQS-QARKEVETYEE 60
           +PT+FEVVT  AKQ  K++S+  N S+SKSS  K   +E     ++ S   RKE E+ +E
Sbjct: 130 LPTIFEVVTGNAKQS-KDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDE 189

Query: 61  DKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           D+D+    +C ACG+NY  DEFWICCD  EKWFHGK V
Sbjct: 190 DEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCV 226

[Close]

BLAST of Cmc08g0225671 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-16
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSK-SSFKSSEAEMQGTCARQS------QARKEV 60
           +PT+FEVV+  AKQ  K+ S   N SKSK S  KS ++E     A+ S      +  +E 
Sbjct: 130 LPTIFEVVSGNAKQS-KDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEED 189

Query: 61  ETYEEDKDEHSDILCRACGENYASDEFWICCDIYEKWFHGKFV 97
           E+ +E +D+    +C ACG+NY +DEFWICCD  EKWFHGK V
Sbjct: 190 ESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCV 231

The following BLAST results are available for this feature:

BLAST of Cmc08g0225671 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067842.1	5.5e-46	100.00	PHD finger protein ALFIN-LIKE 3-like [Cucumis melo var. makuwa]	[more]
XP_016903323.1	5.5e-46	100.00	PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo]	[more]
XP_004141692.1	2.6e-35	85.57	PHD finger protein ALFIN-LIKE 3 [Cucumis sativus] >KGN45504.1 hypothetical prote...	[more]
XP_008462331.1	8.2e-34	82.47	PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008462330.1	2.0e-32	80.00	PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo]	[more]

BLAST of Cmc08g0225671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XEM9	6.6e-18	48.57	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1	[more]
Q9M2B4	8.6e-18	47.92	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
O81488	2.5e-17	49.50	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2	[more]
Q8LA16	1.2e-16	51.02	PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=AL7 PE=1 SV=1	[more]
Q40359	2.3e-15	47.52	PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1	[more]

BLAST of Cmc08g0225671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHJ0	2.7e-46	100.00	PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4E514	2.7e-46	100.00	PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=...	[more]
A0A0A0K9L1	1.2e-35	85.57	PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE...	[more]
A0A5D3BXQ0	4.0e-34	82.47	PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CGR0	4.0e-34	82.47	PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cmc08g0225671 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20510.1	4.7e-19	48.57	alfin-like 5	[more]
AT3G42790.1	6.1e-19	47.92	alfin-like 3	[more]
AT5G26210.1	1.8e-18	49.50	alfin-like 4	[more]
AT1G14510.1	8.8e-18	51.02	alfin-like 7	[more]
AT2G02470.1	4.8e-16	46.60	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 57..97 e-value: 3.8E-12 score: 47.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..49
None	No IPR available	PANTHER	PTHR12321:SF141	PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1	coord: 1..96
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 1..96
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 48..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225671.1	Cmc08g0225671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035064	methylated histone binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0042393	histone binding