Cmc08g0224141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0224141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 13997953 .. 13998861 (+)
RNA-Seq Expression	Cmc08g0224141
Synteny	Cmc08g0224141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTATCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCTAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCACGTACATCCAGTGGACACGATGGTATATGGGTAATAGTAAACAGACTCACCAAGATGGCACGATTTATACTGGTTAAAGTGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGTTTCAGATAGGAATCCGATGCTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATTATTTCATCACCAAACAGATGGTCAGTCTGAGAGGACCATCCAAAGTTTAGAGGACATGTTGAGAGCATGTGTTATTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAGTCTAGTATCGGTATGGCACAATATGAGGCCTTATACAGCAGGCCATGCAGAACTCCTGTGTGCTGGAATGAAGTGTTAGAGCGAAAGCTAGTGGGTCCTGAGTTGGTTCAGATTACAACAAACAATATTAAGTTAATTAGAGAAAACCCGAGGACAGCCCAAGATCGGCAGAAAAGTTATGCAGATAAGCAACGAAGAAACTTAGAATTCCAAGTTGAAGATCAAGTTTTCTTGAAGTTATCTCCATGGCGAGGTGTTATTCGTTTCAGAAGAAAAGGTAAGTTAAGTCCTAGATATATTAGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTTTCTTGCACGAATACATGA

mRNA sequence

ATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTATCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCTAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCACGTACATCCAGTGGACACGATGGTATATGGGTAATAGTAAACAGACTCACCAAGATGGCACGATTTATACTGGTTAAAGTGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGTTTCAGATAGGAATCCGATGCTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATTATTTCATCACCAAACAGATGGTCAGTCTGAGAGGACCATCCAAAGTTTAGAGGACATGTTGAGAGCATGTGTTATTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAGTCTAGTATCGGTATGGCACAATATGAGGCCTTATACAGCAGGCCATGCAGAACTCCTGTGTGCTGGAATGAAGTGTTAGAGCGAAAGCTAGTGGGTCCTGAGTTGGTTCAGATTACAACAAACAATATTAAGTTAATTAGAGAAAACCCGAGGACAGCCCAAGATCGGCAGAAAAGTTATGCAGATAAGCAACGAAGAAACTTAGAATTCCAAGTTGAAGATCAAGTTTTCTTGAAGTTATCTCCATGGCGAGGTGTTATTCGTTTCAGAAGAAAAGGTAAGTTAAGTCCTAGATATATTAGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTTTCTTGCACGAATACATGA

Coding sequence (CDS)

ATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTATCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCTAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCACGTACATCCAGTGGACACGATGGTATATGGGTAATAGTAAACAGACTCACCAAGATGGCACGATTTATACTGGTTAAAGTGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACTAGTGTCCATAGTTTCAGATAGGAATCCGATGCTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATTATTTCATCACCAAACAGATGGTCAGTCTGAGAGGACCATCCAAAGTTTAGAGGACATGTTGAGAGCATGTGTTATTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAGTCTAGTATCGGTATGGCACAATATGAGGCCTTATACAGCAGGCCATGCAGAACTCCTGTGTGCTGGAATGAAGTGTTAGAGCGAAAGCTAGTGGGTCCTGAGTTGGTTCAGATTACAACAAACAATATTAAGTTAATTAGAGAAAACCCGAGGACAGCCCAAGATCGGCAGAAAAGTTATGCAGATAAGCAACGAAGAAACTTAGAATTCCAAGTTGAAGATCAAGTTTTCTTGAAGTTATCTCCATGGCGAGGTGTTATTCGTTTCAGAAGAAAAGGTAAGTTAAGTCCTAGATATATTAGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTTTCTTGCACGAATACATGA

Protein sequence

MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT

Homology

[Close]

BLAST of Cmc08g0224141 vs. NCBI nr
Match: KAA0043587.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 3.8e-162
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 20  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 79
           PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT
Sbjct: 563 PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 622

Query: 80  STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 139
           STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG
Sbjct: 623 STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 682

Query: 140 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 199
           QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV
Sbjct: 683 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 742

Query: 200 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 259
           CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL
Sbjct: 743 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 802

Query: 260 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 303
           SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Sbjct: 803 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 845

[Close]

BLAST of Cmc08g0224141 vs. NCBI nr
Match: TYK29773.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 3.8e-162
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 20  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 79
           PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT
Sbjct: 595 PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 654

Query: 80  STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 139
           STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG
Sbjct: 655 STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 714

Query: 140 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 199
           QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV
Sbjct: 715 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 774

Query: 200 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 259
           CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL
Sbjct: 775 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 834

Query: 260 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 303
           SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Sbjct: 835 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 877

[Close]

BLAST of Cmc08g0224141 vs. NCBI nr
Match: TYK05214.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 269/296 (90.88%), Postives = 277/296 (93.58%), Query Frame = 0


Query: 1   MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
           MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGI
Sbjct: 625 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 684

Query: 61  WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
           WVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV VSIVSDR+P  TSKFWPSLQ
Sbjct: 685 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 744

Query: 121 KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
           KAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQS
Sbjct: 745 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 804

Query: 181 SIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYA 240
           SIGMA YEALY RPCRTPVCWNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYA
Sbjct: 805 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 864

Query: 241 DKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
           DK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Sbjct: 865 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLE 920

[Close]

BLAST of Cmc08g0224141 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 269/296 (90.88%), Postives = 277/296 (93.58%), Query Frame = 0


Query: 1   MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
           MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGI
Sbjct: 230 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 289

Query: 61  WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
           WVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV VSIVSDR+P  TSKFWPSLQ
Sbjct: 290 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 349

Query: 121 KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
           KAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQS
Sbjct: 350 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 409

Query: 181 SIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYA 240
           SIGMA YEALY RPCRTPVCWNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYA
Sbjct: 410 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 469

Query: 241 DKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
           DK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Sbjct: 470 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLE 525

[Close]

BLAST of Cmc08g0224141 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 269/296 (90.88%), Postives = 277/296 (93.58%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGI
Sbjct: 752  MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 811

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            WVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV VSIVSDR+P  TSKFWPSLQ
Sbjct: 812  WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 871

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
            KAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQS
Sbjct: 872  KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 931

Query: 181  SIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYA 240
            SIGMA YEALY RPCRTPVCWNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYA
Sbjct: 932  SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 991

Query: 241  DKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
            DK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Sbjct: 992  DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLE 1047

[Close]

BLAST of Cmc08g0224141 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 94/303 (31.02%), Postives = 153/303 (50.50%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            ++  I++Y+  C+  Q +K  R R  G L PL + E +W  I+MDF+ GLP TS+  + I
Sbjct: 1157 LQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMI 1216

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
             V+V+R +K A FI  + T    QL  L    I S +G   +I SDR+  +T+  +  L 
Sbjct: 1217 LVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELT 1276

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
            K +G     S+  H QTDGQSERTIQ+L  +LRA V     +W  +LP +EF YN++   
Sbjct: 1277 KRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTR 1336

Query: 181  SIGMAQYEALYSRPCRTPVCW--NEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKS 240
            ++G + +E        TP     +EV  R     EL +         +E    AQ   ++
Sbjct: 1337 TLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMET 1396

Query: 241  YADKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKG---KLSPRYIRPYQITERVGPAAYRL 299
              +++R+ L   + D V +          + +KG   K+   Y+ P+++ +++   AY L
Sbjct: 1397 NNNQRRKPLLLNIGDHVLVHRD------AYFKKGAYMKVQQIYVGPFRVVKKINDNAYEL 1453

[Close]

BLAST of Cmc08g0224141 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-32
Identity = 88/298 (29.53%), Postives = 157/298 (52.68%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            +V+V+R +KMA  +    + T +Q AR++  ++++ +G    I++D + + TS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
                  +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  SIGMAQYEALYS-RPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSY 240
            +  M  +E ++   P  +P+   E+        E  Q T    + ++E+  T   + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
             D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1236

[Close]

BLAST of Cmc08g0224141 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-32
Identity = 88/298 (29.53%), Postives = 157/298 (52.68%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            +V+V+R +KMA  +    + T +Q AR++  ++++ +G    I++D + + TS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
                  +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  SIGMAQYEALYS-RPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSY 240
            +  M  +E ++   P  +P+   E+        E  Q T    + ++E+  T   + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
             D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1236

[Close]

BLAST of Cmc08g0224141 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-32
Identity = 88/298 (29.53%), Postives = 157/298 (52.68%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            +V+V+R +KMA  +    + T +Q AR++  ++++ +G    I++D + + TS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
                  +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  SIGMAQYEALYS-RPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSY 240
            +  M  +E ++   P  +P+   E+        E  Q T    + ++E+  T   + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
             D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1236

[Close]

BLAST of Cmc08g0224141 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-32
Identity = 88/298 (29.53%), Postives = 157/298 (52.68%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C   Q  K    +P G L P+   E  WE ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            +V+V+R +KMA  +    + T +Q AR++  ++++ +G    I++D + + TS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
                  +KFS  +  QTDGQ+ERT Q++E +LR        +W  H+ L++ +YNN+  S
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  SIGMAQYEALYS-RPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSY 240
            +  M  +E ++   P  +P+   E+        E  Q T    + ++E+  T   + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKQRRNL-EFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
             D + + + EFQ  D V +K +   G +   +  KL+P +  P+ + ++ GP  Y L+
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1236

[Close]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL
Match: A0A5A7TP81 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00160 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 20  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 79
           PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT
Sbjct: 563 PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 622

Query: 80  STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 139
           STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG
Sbjct: 623 STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 682

Query: 140 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 199
           QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV
Sbjct: 683 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 742

Query: 200 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 259
           CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL
Sbjct: 743 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 802

Query: 260 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 303
           SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Sbjct: 803 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 845

[Close]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL
Match: A0A5D3E109 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00320 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 20  PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 79
           PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT
Sbjct: 595 PVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVNRLTKMARFILVKVT 654

Query: 80  STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 139
           STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG
Sbjct: 655 STLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQKAMGTGLKFSTLFHHQTDG 714

Query: 140 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 199
           QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV
Sbjct: 715 QSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQSSIGMAQYEALYSRPCRTPV 774

Query: 200 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 259
           CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL
Sbjct: 775 CWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYADKQRRNLEFQVEDQVFLKL 834

Query: 260 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 303
           SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT
Sbjct: 835 SPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLEFSCTNT 877

[Close]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.6e-152
Identity = 269/296 (90.88%), Postives = 277/296 (93.58%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGI
Sbjct: 1160 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1219

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            WVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV VSIVSDR+P  TSKFWPSLQ
Sbjct: 1220 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1279

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
            KAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQS
Sbjct: 1280 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1339

Query: 181  SIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYA 240
            SIGMA YEALY RPCRTPVCWNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYA
Sbjct: 1340 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1399

Query: 241  DKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
            DK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Sbjct: 1400 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLE 1455

[Close]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.6e-152
Identity = 269/296 (90.88%), Postives = 277/296 (93.58%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGI
Sbjct: 1198 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1257

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            WVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV VSIVSDR+P  TSKFWPSLQ
Sbjct: 1258 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1317

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
            KAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQS
Sbjct: 1318 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1377

Query: 181  SIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYA 240
            SIGMA YEALY RPCRTPVCWNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYA
Sbjct: 1378 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1437

Query: 241  DKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
            DK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Sbjct: 1438 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLE 1493

[Close]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.6e-152
Identity = 269/296 (90.88%), Postives = 277/296 (93.58%), Query Frame = 0


Query: 1    MKQEIVEYVDRCLIYQQVKPVRQRPGGFLNPLLVPEWKWEHITMDFLFGLPRTSSGHDGI 60
            MKQEI EYVDRCLI QQVKPVRQRPGGFLNPL VPEWKWEHITMDFLFGLPRTSSGHDGI
Sbjct: 1198 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1257

Query: 61   WVIVNRLTKMARFILVKVTSTLDQLARLYVDKIVSQYGVLVSIVSDRNPMLTSKFWPSLQ 120
            WVIV+RLTK  RFI +K+TSTLDQLARLYVDKIVSQYGV VSIVSDR+P  TSKFWPSLQ
Sbjct: 1258 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1317

Query: 121  KAMGTGLKFSTLFHHQTDGQSERTIQSLEDMLRACVIQLKGSWDTHLPLMEFAYNNSYQS 180
            KAMGTGLKFST FH QTDGQSERTIQ+LEDMLRACV+QLKGSWDTHLPLMEFAYNN+YQS
Sbjct: 1318 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1377

Query: 181  SIGMAQYEALYSRPCRTPVCWNEVLERKLVGPELVQITTNNIKLIRENPRTAQDRQKSYA 240
            SIGMA YEALY RPCRTPVCWNEV ERKLVGPELVQITTNNIKLIREN R AQDRQKSYA
Sbjct: 1378 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1437

Query: 241  DKQRRNLEFQVEDQVFLKLSPWRGVIRFRRKGKLSPRYIRPYQITERVGPAAYRLE 297
            DK+RRNLEFQV DQVFLKLSPWRGVIRF RKGKLSPRYI PYQITERVGPAAYRLE
Sbjct: 1438 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLE 1493

The following BLAST results are available for this feature:

BLAST of Cmc08g0224141 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043587.1	3.8e-162	100.00	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK29773.1	3.8e-162	100.00	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK05214.1	1.4e-151	90.88	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053246.1	1.4e-151	90.88	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050493.1	1.4e-151	90.88	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0224141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	2.3e-32	31.02	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	3.8e-32	29.53	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.8e-32	29.53	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.8e-32	29.53	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.8e-32	29.53	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP81	1.8e-162	100.00	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3E109	1.8e-162	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22...	[more]
A0A5A7U2V7	6.6e-152	90.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	6.6e-152	90.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	6.6e-152	90.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc08g0224141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 31..234 e-value: 1.3E-39 score: 137.6
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 6..185
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 31..194 score: 13.655631
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 30..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0224141.1	Cmc08g0224141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding