Cmc08g0224131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0224131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 13996699 .. 13997624 (+)
RNA-Seq Expression	Cmc08g0224131
Synteny	Cmc08g0224131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTCAGTTTCACGAATGCGCCAGCGATTTTCATGGATCTCATGAATAGGATCTTCCATCAGTATTTAGATCAGTTTATGATCGTATTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGCCCATGAGGAACATTTGAGGATTGTTTTACAGACTCTACGTGATAAACAGTTGTACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGACATGTAGTTTCAGCAAAAAGAGTTAGTGTCGATCCACAAAAAGTGGAAGCAGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAATACGTAGTTTCTTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCACGATTGGCATTACCTCTGACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAATTTTTCAGGAATTGAAGAAAAGACTAGTCACAAACCTATTCTGCCACTTCCTGTAATAGGGAAAGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATACAAGATGGGAATGTAATAGCTTATGCTTTAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTATCATTAAAAATCGGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAGAGTCTGAAGTATATTTTTAATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTTATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGACTAACGTAGTAACGGATGCATTAAGTAGGAAGTTAAGACTTCAGAAGAGTGCTTTGTGTGGTATTCGAGTAGCTTTATTGAATGAGTAA

mRNA sequence

ATGCCATTCAGTTTCACGAATGCGCCAGCGATTTTCATGGATCTCATGAATAGGATCTTCCATCAGTATTTAGATCAGTTTATGATCGTATTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGCCCATGAGGAACATTTGAGGATTGTTTTACAGACTCTACGTGATAAACAGTTGTACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGACATGTAGTTTCAGCAAAAAGAGTTAGTGTCGATCCACAAAAAGTGGAAGCAGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAATACGTAGTTTCTTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCACGATTGGCATTACCTCTGACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAATTTTTCAGGAATTGAAGAAAAGACTAGTCACAAACCTATTCTGCCACTTCCTGCTAGGATTAGGTTGTGTGCTTATACAAGATGGGAATGTAATAGCTTATGCTTTAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTATCATTAAAAATCGGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAGAGTCTGAAGTATATTTTTAATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTTATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGACTAACGTAGTAACGGATGCATTAAGTAGGAAGTTAAGACTTCAGAAGAGTGCTTTGTGTGGTATTCGAGTAGCTTTATTGAATGAGTAA

Coding sequence (CDS)

ATGCCATTCAGTTTCACGAATGCGCCAGCGATTTTCATGGATCTCATGAATAGGATCTTCCATCAGTATTTAGATCAGTTTATGATCGTATTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGCCCATGAGGAACATTTGAGGATTGTTTTACAGACTCTACGTGATAAACAGTTGTACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGACATGTAGTTTCAGCAAAAAGAGTTAGTGTCGATCCACAAAAAGTGGAAGCAGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAATACGTAGTTTCTTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCACGATTGGCATTACCTCTGACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAATTTTTCAGGAATTGAAGAAAAGACTAGTCACAAACCTATTCTGCCACTTCCTGCTAGGATTAGGTTGTGTGCTTATACAAGATGGGAATGTAATAGCTTATGCTTTAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTATCATTAAAAATCGGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAGAGTCTGAAGTATATTTTTAATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTTATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGACTAACGTAGTAACGGATGCATTAAGTAGGAAGTTAAGACTTCAGAAGAGTGCTTTGTGTGGTATTCGAGTAGCTTTATTGAATGAGTAA

Protein sequence

MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQLYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYRRFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTNLFCHFLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIFTDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCGIRVALLNE

Homology

[Close]

BLAST of Cmc08g0224131 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 534.3 bits (1375), Expect = 6.8e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 333 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 392

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 393 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 452

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 453 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 512

Query: 181 -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
              LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 513 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 572

Query: 241 TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
           TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 573 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 632

[Close]

BLAST of Cmc08g0224131 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 534.3 bits (1375), Expect = 6.8e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 440 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 499

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 500 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 559

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 560 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 619

Query: 181 -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
              LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 620 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 679

Query: 241 TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
           TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 680 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 739

[Close]

BLAST of Cmc08g0224131 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 534.3 bits (1375), Expect = 6.8e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1    MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
            MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
               LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
            TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

[Close]

BLAST of Cmc08g0224131 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 534.3 bits (1375), Expect = 6.8e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1    MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
            MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
               LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
            TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

[Close]

BLAST of Cmc08g0224131 vs. NCBI nr
Match: KAA0062270.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 534.3 bits (1375), Expect = 6.8e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 677 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 736

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 737 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 796

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 797 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 856

Query: 181 -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
              LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 857 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 916

Query: 241 TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
           TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 917 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 976

[Close]

BLAST of Cmc08g0224131 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.7e-51
Identity = 111/299 (37.12%), Postives = 172/299 (57.53%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF   NAPA F   MN I    L++  +V++DDI+V+S   + H + L +V + L    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           L  +  KCEF  ++  FLGHV++   +  +P+K+EA+  +  PT   EI++FLGL GYYR
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSD-KCEQIFQELKKRL-------VTNLFCHFLL-- 180
           +FI +F+ +A P+T   +KN K + ++ + +  F++LK  +       V +    F L  
Sbjct: 454 KFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTT 513

Query: 181 -----GLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHI 240
                 LG VL QDG+ ++Y  R L EHE NY T + EL A+V + K  RHYL G    I
Sbjct: 514 DASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEI 573

Query: 241 FTDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSAL 285
            +DH+ L +++  K+ N +  RW   + ++D  I+Y  GK N V DALSR ++L+++ L
Sbjct: 574 SSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR-IKLEETYL 631

[Close]

BLAST of Cmc08g0224131 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.8e-49
Identity = 107/291 (36.77%), Postives = 163/291 (56.01%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF   NAPA F   MN I    L++  +V++DDI+++S     H   +++V   L D  
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           L  +  KCEF  ++  FLGH+V+   +  +P KV+A+V++  PT   EIR+FLGL GYYR
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQI--FQELKKRLVTNLFCHF---------- 180
           +FI +++ +A P+T+  +K  K + + K E I  F++LK  ++ +               
Sbjct: 453 KFIPNYADIAKPMTSCLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLT 512

Query: 181 ----LLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCH 240
                L LG VL Q+G+ I++  R L +HE NY   + EL A+V + K  RHYL G +  
Sbjct: 513 TDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFL 572

Query: 241 IFTDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSR 276
           I +DH+ L+++ N KE   +  RW   + +Y   I+Y  GK N V DALSR
Sbjct: 573 IASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc08g0224131 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.4e-47
Identity = 112/305 (36.72%), Postives = 165/305 (54.10%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           +PF   NAPAIF  +++ I  +++ +   V+IDDI+V+S D + H ++LR+VL +L    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           L     K  F   QV FLG++V+A  +  DP+KV A+     PTS  E++ FLG+  YYR
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYR 369

Query: 121 RFIEDFSRLALPLTALTR---KNAKFEWSDKCE--------QIFQELKKRLVTNLFCHFL 180
           +FI+D++++A PLT LTR    N K   S K          Q F +LK  L ++    F 
Sbjct: 370 KFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFP 429

Query: 181 L--------------GLGCVLIQD----GNVIAYALRQLKEHECNYPTHDLELAAVVLSL 240
                           +G VL QD       IAY  R L + E NY T + E+ A++ SL
Sbjct: 430 CFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSL 489

Query: 241 KIGRHYLFGE-KCHIFTDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVT 276
              R YL+G     ++TDH+ L +    +  N + +RW   I++Y+C + Y PGK+NVV 
Sbjct: 490 DNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVA 549

[Close]

BLAST of Cmc08g0224131 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.2e-40
Identity = 96/303 (31.68%), Postives = 157/303 (51.82%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           +PF   NA +IF   ++ +  + + +   V++DD++++S +   H  H+  VL+ L D  
Sbjct: 309 LPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDAN 368

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           +     K  F+ E V +LG +VS      DP+KV+A+  +  P    ++RSFLGLA YYR
Sbjct: 369 MRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYR 428

Query: 121 RFIEDFSRLALPLTALTR-----------KNAKFEWSDKCEQIFQELKKRLVTN----LF 180
            FI+DF+ +A P+T + +           K    E+++     FQ L+  L +      +
Sbjct: 429 VFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKY 488

Query: 181 CHF-----------LLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIG 240
             F             G+G VL Q+G  I    R LK+ E NY T++ EL A+V +L   
Sbjct: 489 PDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKL 548

Query: 241 RHYLFGEK-CHIFTDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDAL 277
           +++L+G +  +IFTDH+ L +    +  N + +RW   I  ++  + Y PGK N V DAL
Sbjct: 549 QNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADAL 608

[Close]

BLAST of Cmc08g0224131 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-37
Identity = 97/297 (32.66%), Postives = 158/297 (53.20%), Query Frame = 0


Query: 1    MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
            MPF   NAP+ F   M   F     +F+ V++DDIL++S   E H +HL  VL+ L+++ 
Sbjct: 744  MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 803

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
            L  K  KC+F  E+  FLG+ +  ++++    K  A+ ++  P +  + + FLG+  YYR
Sbjct: 804  LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYR 863

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVT-------NLFCHFLL--- 180
            RFI + S++A P+        K +W++K ++  ++LK  L         N   ++ L   
Sbjct: 864  RFIPNCSKIAQPIQLFICD--KSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTD 923

Query: 181  ----GLGCVLIQDGN------VIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFG 240
                G+G VL +  N      V+ Y  + L+  + NYP  +LEL  ++ +L   R+ L G
Sbjct: 924  ASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHG 983

Query: 241  EKCHIFTDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKL 278
            +   + TDH SL  + N+ E   R +RWL+ +  YD T+EY  G  NVV DA+SR +
Sbjct: 984  KHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAI 1036

[Close]

BLAST of Cmc08g0224131 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1    MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
            MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 741  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 800

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 801  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 860

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 861  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 920

Query: 181  -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
               LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 921  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 980

Query: 241  TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
            TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 981  TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1040

[Close]

BLAST of Cmc08g0224131 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1    MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
            MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
               LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
            TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

[Close]

BLAST of Cmc08g0224131 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1    MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
            MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
               LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
            TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

[Close]

BLAST of Cmc08g0224131 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 411 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 470

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 471 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 530

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 531 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 590

Query: 181 -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
              LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 591 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 650

Query: 241 TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
           TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 651 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 710

[Close]

BLAST of Cmc08g0224131 vs. ExPASy TrEMBL
Match: A0A5A7T3K4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00170 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148
Identity = 267/308 (86.69%), Postives = 278/308 (90.26%), Query Frame = 0


Query: 1   MPFSFTNAPAIFMDLMNRIFHQYLDQFMIVFIDDILVYSVDREAHEEHLRIVLQTLRDKQ 60
           MPF  TNAPA+FMDLMNRIFH+YLDQF+IVFIDDILVYSVDRE+HEEHLRIVLQTLR+KQ
Sbjct: 380 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 439

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSAKRVSVDPQKVEAVVNWERPTSATEIRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVSAK VSVDPQKVEAVVNWERP SATE+RSFLGLAGYYR
Sbjct: 440 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 499

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVTN-------------LFCH 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQ FQELKKRLVT              ++C 
Sbjct: 500 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 559

Query: 181 -FLLGLGCVLIQDGNVIAYALRQLKEHECNYPTHDLELAAVVLSLKIGRHYLFGEKCHIF 240
              LGLGCVL+QDGNVIAYA RQLKEHECNYPTHDLELAAVVL+LKI RHYLFGEKCHIF
Sbjct: 560 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 619

Query: 241 TDHKSLKYIFNQKELNLRQRRWLELIKDYDCTIEYHPGKTNVVTDALSRKLRLQKSALCG 295
           TDHKSLKYIF+QKELNLRQRRWLELIKDYDCTIEYHPGK NVV DALSRK RL KSALCG
Sbjct: 620 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 679

[Close]

BLAST of Cmc08g0224131 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 4.3e-23
Identity = 50/117 (42.74%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 48  HLRIVLQTLRDKQLYAKFSKCEFWLEQVVFLG--HVVSAKRVSVDPQKVEAVVNWERPTS 107
           HL +VLQ     Q YA   KC F   Q+ +LG  H++S + VS DP K+EA+V W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 ATEIRSFLGLAGYYRRFIEDFSRLALPLTALTRKNAKFEWSDKCEQIFQELKKRLVT 163
            TE+R FLGL GYYRRF++++ ++  PLT L +KN+  +W++     F+ LK  + T
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTT 118

The following BLAST results are available for this feature:

BLAST of Cmc08g0224131 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050493.1	6.8e-148	86.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050527.1	6.8e-148	86.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	6.8e-148	86.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	6.8e-148	86.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
KAA0062270.1	6.8e-148	86.69	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0224131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.7e-51	37.12	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	5.8e-49	36.77	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	5.4e-47	36.72	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10401	2.2e-40	31.68	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q7LHG5	3.0e-37	32.66	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc08g0224131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	3.3e-148	86.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	3.3e-148	86.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	3.3e-148	86.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	3.3e-148	86.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7T3K4	3.3e-148	86.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]

BLAST of Cmc08g0224131 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.3e-23	42.74	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..81 e-value: 6.7E-14 score: 51.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 10.741026
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..170 e-value: 2.9E-28 score: 99.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..88 e-value: 1.2E-31 score: 111.4
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 171..255 e-value: 1.8E-23 score: 82.9
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 80..276
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 80..276
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.1821E-33 score: 119.237
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 171..276 e-value: 2.20585E-47 score: 153.032
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0224131.1	Cmc08g0224131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding