Cmc08g0223921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0223921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase catalytic domain-containing protein
Location	CMiso1.1chr08: 13544450 .. 13544884 (-)
RNA-Seq Expression	Cmc08g0223921
Synteny	Cmc08g0223921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCCCAAAGAAAATATTGCCTTCAAATACTTGAAGATACTAGATTTCTTGAAGCTAAACCAGTTATAACTCCTATGGATCCCAATTTAAAACTATCAAAGAATGGAGGAGAACTTCTAAAGGAAGATGATATCACTTATTATAGAAGATTAATTGGTAGGTTTATATATTTACAAATATCTCGGCCAGACATATGCTTCGTTGTTCATCGGCTAAGCCAATTCATCCAAAGTCCAACTAAAGATGACTTAAATGTCGCTCATCACTTACTAAAGTACCTAAAAATGTCTCCTGGACAAGGCATTCTAATTAGTCCTATCACTTCCTTTCACTTAAAAGCTTTTGTGGATACTGATTGGGGGTCATGTCTTGACACGAGAAGGTCCATTACGAGTTTCTACATATTCCTAGGGGAATCTATCATATCATGA

mRNA sequence

ATGATTTCCCAAAGAAAATATTGCCTTCAAATACTTGAAGATACTAGATTTCTTGAAGCTAAACCAGTTATAACTCCTATGGATCCCAATTTAAAACTATCAAAGAATGGAGGAGAACTTCTAAAGGAAGATGATATCACTTATTATAGAAGATTAATTGGTAGGTTTATATATTTACAAATATCTCGGCCAGACATATGCTTCGTTGTTCATCGGCTAAGCCAATTCATCCAAAGTCCAACTAAAGATGACTTAAATGTCGCTCATCACTTACTAAAGTACCTAAAAATGTCTCCTGGACAAGGCATTCTAATTAGTCCTATCACTTCCTTTCACTTAAAAGCTTTTGTGGATACTGATTGGGGGTCATGTCTTGACACGAGAAGGTCCATTACGAGTTTCTACATATTCCTAGGGGAATCTATCATATCATGA

Coding sequence (CDS)

ATGATTTCCCAAAGAAAATATTGCCTTCAAATACTTGAAGATACTAGATTTCTTGAAGCTAAACCAGTTATAACTCCTATGGATCCCAATTTAAAACTATCAAAGAATGGAGGAGAACTTCTAAAGGAAGATGATATCACTTATTATAGAAGATTAATTGGTAGGTTTATATATTTACAAATATCTCGGCCAGACATATGCTTCGTTGTTCATCGGCTAAGCCAATTCATCCAAAGTCCAACTAAAGATGACTTAAATGTCGCTCATCACTTACTAAAGTACCTAAAAATGTCTCCTGGACAAGGCATTCTAATTAGTCCTATCACTTCCTTTCACTTAAAAGCTTTTGTGGATACTGATTGGGGGTCATGTCTTGACACGAGAAGGTCCATTACGAGTTTCTACATATTCCTAGGGGAATCTATCATATCATGA

Protein sequence

MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDWGSCLDTRRSITSFYIFLGESIIS

Homology

[Close]

BLAST of Cmc08g0223921 vs. NCBI nr
Match: XP_038879273.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida])

HSP 1 Score: 248.8 bits (634), Expect = 2.8e-62
Identity = 124/144 (86.11%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 1   MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQ 60
           MISQRKYCLQILEDT FLEAKP  TPMDPNLKLSKN GELLK DDIT YRRLIGR IYLQ
Sbjct: 231 MISQRKYCLQILEDTGFLEAKPATTPMDPNLKLSKNEGELLKADDITCYRRLIGRLIYLQ 290

Query: 61  ISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTD 120
           ISRPDICFVVHRLSQFI SPTK  LN AHHLL+YLK  PGQGILISPITSFHLKAFVD D
Sbjct: 291 ISRPDICFVVHRLSQFIHSPTKAHLNAAHHLLRYLKRYPGQGILISPITSFHLKAFVDAD 350

Query: 121 WGSCLDTRRSITSFYIFLGESIIS 145
           WGSC  TRRSIT F IFLG SIIS
Sbjct: 351 WGSCPVTRRSITGFCIFLGASIIS 374

[Close]

BLAST of Cmc08g0223921 vs. NCBI nr
Match: XP_038896371.1 (uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 121/144 (84.03%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQ 60
           MISQRKYCLQILEDT FLEAKPV TPMDPNLKLSKN GE LK DDIT YRRLI R IYLQ
Sbjct: 123 MISQRKYCLQILEDTGFLEAKPVTTPMDPNLKLSKNEGEFLKADDITCYRRLICRLIYLQ 182

Query: 61  ISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTD 120
           IS+PDICF +HRLSQFI SPTK  LN AHHLL+YLK SPGQGILISPITSFHLKAFVD D
Sbjct: 183 ISQPDICFAIHRLSQFIHSPTKVQLNAAHHLLRYLKQSPGQGILISPITSFHLKAFVDVD 242

Query: 121 WGSCLDTRRSITSFYIFLGESIIS 145
           WGSC DTRRSIT F IFLG  IIS
Sbjct: 243 WGSCPDTRRSITGFCIFLGAFIIS 266

[Close]

BLAST of Cmc08g0223921 vs. NCBI nr
Match: XP_031745923.1 (uncharacterized protein LOC116406346 [Cucumis sativus] >XP_031745939.1 uncharacterized protein LOC116406359 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQ 60
           M+SQRKYCLQILEDT FL++K V+ PMDPNLKL K+ GE L E+D T YRRLIGR IYLQ
Sbjct: 140 MLSQRKYCLQILEDTGFLDSKSVVAPMDPNLKLCKSEGEQLTEEDATCYRRLIGRLIYLQ 199

Query: 61  ISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTD 120
           ISRPDICF VHRLSQF+  PTK  L+ AHHLLKYLK SPGQG+LI PI SFHLKAFVD D
Sbjct: 200 ISRPDICFSVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGVLIKPIDSFHLKAFVDAD 259

Query: 121 WGSCLDTRRSITSFYIFLGESIIS 145
           WGSCLDTRRS+T F IFLG+SIIS
Sbjct: 260 WGSCLDTRRSVTGFCIFLGDSIIS 283

[Close]

BLAST of Cmc08g0223921 vs. NCBI nr
Match: XP_031744313.1 (uncharacterized protein LOC116404977 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 110/144 (76.39%), Postives = 121/144 (84.03%), Query Frame = 0


Query: 1   MISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQ 60
           M+SQRKYCLQILEDT FL++KPV+ PMDPNLKL K+ GE L E+D T YRRLIGR IYLQ
Sbjct: 140 MLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKSEGEQLIEEDATCYRRLIGRLIYLQ 199

Query: 61  ISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTD 120
           ISRPDICF VHRLSQF+  PTK  L+ AHHLLKYLK S GQG+LI PI SFHLKAFV  D
Sbjct: 200 ISRPDICFSVHRLSQFLHKPTKHHLDAAHHLLKYLKGSSGQGVLIKPIDSFHLKAFVVAD 259

Query: 121 WGSCLDTRRSITSFYIFLGESIIS 145
           WGSCLDTRRS+T F IFLG+SIIS
Sbjct: 260 WGSCLDTRRSVTGFCIFLGDSIIS 283

[Close]

BLAST of Cmc08g0223921 vs. NCBI nr
Match: XP_022899321.1 (uncharacterized protein LOC111412620 [Olea europaea var. sylvestris])

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-41
Identity = 84/143 (58.74%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQR+Y LQ+LEDT FL +KP   PMDP LKLS   G+L+   D + YR+L GR +YL I
Sbjct: 125 LSQRQYTLQLLEDTGFLASKPAALPMDPKLKLSSYEGDLIV--DASMYRKLTGRLLYLTI 184

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           SRPDI F VH+LSQF+  P +  L+ AHHLL+Y+K SPGQGIL S  +S  L+AF D DW
Sbjct: 185 SRPDITFAVHKLSQFVSQPRQPHLDAAHHLLQYIKASPGQGILFSAQSSLQLRAFADADW 244

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
           GSCLDTR+S+  F +FLG+S+IS
Sbjct: 245 GSCLDTRKSVAGFCVFLGDSLIS 265

[Close]

BLAST of Cmc08g0223921 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-23
Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 2    ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
            +SQR+Y L +L  T  + AKPV TPM P+ KLS   G   K  D T YR ++G   YL  
Sbjct: 1200 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSG--TKLTDPTEYRGIVGSLQYLAF 1259

Query: 62   SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
            +RPDI + V+RLSQF+  PT++ L     +L+YL  +P  GI +    +  L A+ D DW
Sbjct: 1260 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1319

Query: 122  GSCLDTRRSITSFYIFLGESIIS 145
                D   S   + ++LG   IS
Sbjct: 1320 AGDKDDYVSTNGYIVYLGHHPIS 1340

[Close]

BLAST of Cmc08g0223921 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.5e-22
Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 2    ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
            +SQR+Y L +L  T  L AKPV TPM  + KL+ + G   K  D T YR ++G   YL  
Sbjct: 1183 LSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSG--TKLPDPTEYRGIVGSLQYLAF 1242

Query: 62   SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
            +RPD+ + V+RLSQ++  PT D  N    +L+YL  +P  GI +    +  L A+ D DW
Sbjct: 1243 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1302

Query: 122  GSCLDTRRSITSFYIFLGESIIS 145
                D   S   + ++LG   IS
Sbjct: 1303 AGDTDDYVSTNGYIVYLGHHPIS 1323

[Close]

BLAST of Cmc08g0223921 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQ KY  QIL +   L+ KP+ TP+   L  S +     K  D + +R ++G   YL +
Sbjct: 56  LSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS---TAKYPDPSDFRSIVGALQYLTL 115

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           +RPDI + V+ + Q +  PT  D ++   +L+Y+K +   G+ I   +  +++AF D+DW
Sbjct: 116 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 175

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
             C  TRRS T F  FLG +IIS
Sbjct: 176 AGCTSTRRSTTGFCTFLGCNIIS 195

[Close]

BLAST of Cmc08g0223921 vs. ExPASy Swiss-Prot
Match: P93290 (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 57  IYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAF 116
           +YL I+RPD+ F V+RLSQF  +     +   + +L Y+K + GQG+  S  +   LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 117 VDTDWGSCLDTRRSITSF 135
            D+DW SC DTRRS+T F
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

[Close]

BLAST of Cmc08g0223921 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 45/147 (30.61%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 2    ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITY----YRRLIGRFI 61
            +SQ KY  ++LE      AKPV TP+  +LKLSK       E+        Y   +G  +
Sbjct: 1060 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119

Query: 62   YLQI-SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAF 121
            Y  + +RPDI   V  +S+F+++P K+       +L+YL+ + G  +         LK +
Sbjct: 1120 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGY 1179

Query: 122  VDTDWGSCLDTRRSITSF-YIFLGESI 143
             D D    +D R+S T + + F G +I
Sbjct: 1180 TDADMAGDIDNRKSSTGYLFTFSGGAI 1205

[Close]

BLAST of Cmc08g0223921 vs. ExPASy TrEMBL
Match: A0A6J1DNK9 (uncharacterized protein LOC111022877 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022877 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.5e-40
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL I
Sbjct: 132 LSQRHYALQLIEDTGFLATKPCPLPMDPNIKLSASDGKLL--DDPSVYRRLIGRLLYLTI 191

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           SRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ IL++P  SF L+AF D DW
Sbjct: 192 SRPDITFTVHKLSQFMAAPHTTHLAAVHSLIRYLKGCPGQEILLNPTKSFQLRAFADADW 251

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
           GSC D+R+S T F IFLG+S++S
Sbjct: 252 GSCFDSRKSTTGFCIFLGDSLVS 272

[Close]

BLAST of Cmc08g0223921 vs. ExPASy TrEMBL
Match: A0A6J1DSZ9 (uncharacterized protein LOC111022877 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022877 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.5e-40
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL I
Sbjct: 132 LSQRHYALQLIEDTGFLATKPCPLPMDPNIKLSASDGKLL--DDPSVYRRLIGRLLYLTI 191

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           SRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ IL++P  SF L+AF D DW
Sbjct: 192 SRPDITFTVHKLSQFMAAPHTTHLAAVHSLIRYLKGCPGQEILLNPTKSFQLRAFADADW 251

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
           GSC D+R+S T F IFLG+S++S
Sbjct: 252 GSCFDSRKSTTGFCIFLGDSLVS 272

[Close]

BLAST of Cmc08g0223921 vs. ExPASy TrEMBL
Match: A0A6J1DP23 (uncharacterized protein LOC111022877 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111022877 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.5e-40
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL I
Sbjct: 132 LSQRHYALQLIEDTGFLATKPCPLPMDPNIKLSASDGKLL--DDPSVYRRLIGRLLYLTI 191

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           SRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ IL++P  SF L+AF D DW
Sbjct: 192 SRPDITFTVHKLSQFMAAPHTTHLAAVHSLIRYLKGCPGQEILLNPTKSFQLRAFADADW 251

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
           GSC D+R+S T F IFLG+S++S
Sbjct: 252 GSCFDSRKSTTGFCIFLGDSLVS 272

[Close]

BLAST of Cmc08g0223921 vs. ExPASy TrEMBL
Match: A0A6J1DQI6 (uncharacterized protein LOC111022877 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022877 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.5e-40
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQR Y LQ++EDT FL  KP   PMDPN+KLS + G+LL  DD + YRRLIGR +YL I
Sbjct: 132 LSQRHYALQLIEDTGFLATKPCPLPMDPNIKLSASDGKLL--DDPSVYRRLIGRLLYLTI 191

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           SRPDI F VH+LSQF+ +P    L   H L++YLK  PGQ IL++P  SF L+AF D DW
Sbjct: 192 SRPDITFTVHKLSQFMAAPHTTHLAAVHSLIRYLKGCPGQEILLNPTKSFQLRAFADADW 251

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
           GSC D+R+S T F IFLG+S++S
Sbjct: 252 GSCFDSRKSTTGFCIFLGDSLVS 272

[Close]

BLAST of Cmc08g0223921 vs. ExPASy TrEMBL
Match: A0A5D3DVP4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00430 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQRKYCLQILED+ FL AKP   PM P+L+LS   G  L ++D + YRRLIGR +YLQI
Sbjct: 622 LSQRKYCLQILEDSGFLAAKPTQCPMVPSLRLSTTSGNALDDEDASSYRRLIGRLLYLQI 681

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           SRPD+ + VH+LSQF+  P  + L   HHLL+YLK +  QGI++     F++K FVD DW
Sbjct: 682 SRPDVSYYVHKLSQFLARPHTEHLIAVHHLLRYLKGTTRQGIMLWASKEFNIKVFVDLDW 741

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
             CLDT++SIT F IFL +S++S
Sbjct: 742 RCCLDTKKSITGFCIFLEKSLVS 764

[Close]

BLAST of Cmc08g0223921 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLS-KNGGELLKEDDITYYRRLIGRFIYLQ 61
           I QRKY L +L++T  L  KP   PMDP++  S  +GG+ +   D   YRRLIGR +YLQ
Sbjct: 333 ICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV---DAKAYRRLIGRLMYLQ 392

Query: 62  ISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTD 121
           I+R DI F V++LSQF ++P          +L Y+K + GQG+  S      L+ F D  
Sbjct: 393 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 452

Query: 122 WGSCLDTRRSITSFYIFLGESIIS 145
           + SC DTRRS   + +FLG S+IS
Sbjct: 453 FQSCKDTRRSTNGYCMFLGTSLIS 473

[Close]

BLAST of Cmc08g0223921 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 7.4e-21
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 2   ISQRKYCLQILEDTRFLEAKPVITPMDPNLKLSKNGGELLKEDDITYYRRLIGRFIYLQI 61
           +SQ KY  QIL +   L+ KP+ TP+   L  S +     K  D + +R ++G   YL +
Sbjct: 56  LSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS---TAKYPDPSDFRSIVGALQYLTL 115

Query: 62  SRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAFVDTDW 121
           +RPDI + V+ + Q +  PT  D ++   +L+Y+K +   G+ I   +  +++AF D+DW
Sbjct: 116 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 175

Query: 122 GSCLDTRRSITSFYIFLGESIIS 145
             C  TRRS T F  FLG +IIS
Sbjct: 176 AGCTSTRRSTTGFCTFLGCNIIS 195

[Close]

BLAST of Cmc08g0223921 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 80.9 bits (198), Expect = 9.4e-16
Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 57  IYLQISRPDICFVVHRLSQFIQSPTKDDLNVAHHLLKYLKMSPGQGILISPITSFHLKAF 116
           +YL I+RPD+ F V+RLSQF  +     +   + +L Y+K + GQG+  S  +   LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 117 VDTDWGSCLDTRRSITSF 135
            D+DW SC DTRRS+T F
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of Cmc08g0223921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879273.1	2.8e-62	86.11	uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]	[more]
XP_038896371.1	2.4e-61	84.03	uncharacterized mitochondrial protein AtMg00810-like [Benincasa hispida]	[more]
XP_031745923.1	1.2e-57	77.08	uncharacterized protein LOC116406346 [Cucumis sativus] >XP_031745939.1 uncharact...	[more]
XP_031744313.1	2.3e-56	76.39	uncharacterized protein LOC116404977 [Cucumis sativus]	[more]
XP_022899321.1	2.7e-41	58.74	uncharacterized protein LOC111412620 [Olea europaea var. sylvestris]	[more]

BLAST of Cmc08g0223921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.5e-23	39.86	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	6.5e-22	38.46	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	1.0e-19	36.36	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93290	1.3e-14	46.15	Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	5.2e-11	30.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc08g0223921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNK9	5.5e-40	58.04	uncharacterized protein LOC111022877 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DSZ9	5.5e-40	58.04	uncharacterized protein LOC111022877 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DP23	5.5e-40	58.04	uncharacterized protein LOC111022877 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DQI6	5.5e-40	58.04	uncharacterized protein LOC111022877 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3DVP4	1.8e-38	55.24	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc08g0223921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.2e-26	43.75	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.4e-21	36.36	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	9.4e-16	46.15	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF313	SUBFAMILY NOT NAMED	coord: 3..84
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 3..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0223921.1	Cmc08g0223921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0016020	membrane