Cmc08g0223581 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0223581
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	E3 ubiquitin-protein ligase
Location	CMiso1.1chr08: 13155825 .. 13165861 (+)
RNA-Seq Expression	Cmc08g0223581
Synteny	Cmc08g0223581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTGAAGGATATACCCAATTCCATTATTTTTATTTTTATTTTTATTTTATTATTCAGTATTCCTCTTCCTTCCTTCCTCCTATTCCCACTTTCACTACAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCCCCGCCCCTCCCGTCACTCTTCCCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCCGCTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCTAATTTGATCATGGAACACCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGATGATAATGAATACGACCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTCTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCACAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTCTCAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCATAATCGTATAAGGTAACTTCTATTTTGAGGAAAATTTTGTTGGGGTGGTGGTTTTTGGTTTGAATTGGTTTCTCTTTTATGTCTAATTTTAGACTGTATTCGGTTTTCCGATGAATTTACTAATTGGGTTCTTAGAATGATTCTTGTGCGAAGATTTTCTGCTAGTTTGTGGAGATTTTCGTCCAATGGATTACGATCACTATAATTAACTATCGGATTATATGCATGTGTCATCCCATATATTATTTCTTTCATTTTCTTCATAGTGTTGGGAAGGGGGAAAGAAAACTACTCAAGTTGTTGGAATAGAGTTCTTTTGGATGTTAAGCCAACTTGATGAATGGAGTTCTACTAGTTTAATTTCGAATGGATTCTATATTTTGACAGTCGGTTGAATTGAGTTTTCTTTTCCATGTCAAATCATAAATTGATACTTTTAGAATGTAGGAGGAAAGTTTTTGGTATCTAATGCAACATTGTTACTGAATTCAACCATTACTAATGAGGGTGAACTAGTGACAAATTTGATAGTTTTGACATGGTTCTTGTAGATTTGAACTTTTTGCTTTTAAAGTGGTTACTATGTGCTGTTTACTTAATTTATATCTGGAATGTTGTTTTGTCGTCCCATCTTAAGAATCTAGCACGTATTATATATGGTAATGACTTTGATTATGTATGGTAAGAAACTATGTATCACCTAGGTGCTTTGGGTTTCCCCTTGGTAATGGATTTCCTTAGGAATCTTTATTTCATTTATGGTAATAAATCTTGTTTCTCGATTTAAAAATTTGTTGGATTAGGTTTTTGGTTTCCATGTCTCTGAAGGGTTTTACACTTTTTAGCAGGAATTTATTTCCTGTCAAGATATTTGCACGTTCACTTATTTTTCTTTTTGTGACACCACATGTAGAAAAATCTTTGTATTTCCAATGTAGTTCGACTCTCTTTTTACCTCCTCTGTTTTTTTTTTCCCTAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATTTGGTGGGTATTTGGATTCTATTGGATTGTGATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTAAATACTCTCTTCTAGGGTCTTGAAACCCTTTTCTTTCCTACTTAACAACGCCTGTGGTTTATCGGCAATTTAGTAGGATAATGATGAAATATGGGATGTTCATTATACGTACCAGTTTGCTTGAAATGTATTTACTCTCCATCTCTAGCTACTGCAGCTTCTAAAATTCAATTAGATTTACTAATTTCTCGAATTATTTATGAGAATAAATAATGCATTTTTCATTTTGTGATCTCAATTCTTATATTACTTCCGTAAATGTGTGAGTCTAAAATATGTTATTTGTGATTAATGCGCTTTCTTTTTCACTAACTCCTGTCATCACTGAAAAAAGCACTCATGTCGTGTTTTCATATTATTTTTTAGTTCCTTTGAGTTTCTGCTTGTGGACCTGTGATTATATTTCCCTTGGGTTCTGCATTGCTTCTTGGTGATAGCCTTTTTATATACATATATATATATATACATACATATATATATATACATACATATATATATATATACATACATATATATATATATACATACATATATATATATATATACATACATATATATATATACATACATATATATATATACATACATATATATATATATACATACATATATATATATATACATACATATATATATATATACATATATATATTTTTGTTGTTGTTATCATTTCAATGTCATTGTCATTTTTGTGTGTGAAAACTTCTCGTTTGACTTGATGGAAGTCAAATATGAGGCTTCACTGATGGACTCATGGTATCAAATGCAGGTTGGCAGTGGTTTTCTTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTATTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGTGAGCAACAATCTTATTTATACTTTCATTCTCTTTTCATACCACCATGGTAAATGAAAAATTTTGCTCTGTAAAATATTTCTTGGAAGGAATAATTTAGGCTAAATTATAACAAATACCCTTGAACTTCCCTCTTTGTTTAAAAAATACCCCTATACTTTCAAATGTTGCAATGTTACCTCTAAACATTCATAAATGTTTCAAAACTACCCTTGGATTATTAATTCTTTAGAATGTTGTATAAAGATTAGGATTTAGAATTGCATGACGATGACCTAAAATGATGAGATGATTCAAATTTTCATTCCACATCAGTTACTGCATCATTTCCTATCTCAATTTCTTTCTAAATTCTAAAGAATTTCTACCGCAAGAGTATTTCTGAAACATTTATGAAAGTTCAAGGGTTATTACAACTTTTGAAAGTATAAGAGTTTTTTTTAAACAAACGCCAAAGTTCAAGTATATTTTTATAATTTAACCGATAATTTATCTGCACATTTTCTACTTTGCCCCTTATCATCAAACTCATAAAATAGACATCTTGTATCATTACTTCTACAAAATTTTCCTATTTTTACATGTATACCATTAACAAGGTATCCTGGTTACCTTTACAAGATATTTCTCCATGGAGTTTTCGTCTTTAAAAATGCTTTATCTGACGCAAACTGAATCATGATTCCTTGTCTCAAAAGAACCTTTTTCTATCCTTCATAGTGCCTTTTATTATAGCATTGTAGGACTCTTTACTATTTGATTAACTCTATGGTATTATATCTGCAGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTACAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCCCTCTGCAAATTCAGCATCGGACAAGGGGATTCCTTGGTCTGATTCAACTTTTGATCGAGTCGGAGCATTCTTGAGGCTGGGACAAGATCTTTGACAACGTAACCACACAGGTCATGTATATCGTCTCTTAACATATGTTGATTTGAGATTGAGACGGGTGGGGGAGGGTAAAGTCTTGTTGAAAGGGAGGCCTTGCCCTTTTTTTTCCTCTTTGAAAGAGGAAATAATTTCCTTAATGGCCAAACTGTAGATAGATAGCTTACTTCTTTCGTTTGAGATTTACTTAGGAGGCCAGATTAGTGGGGAATACTGTGAATAGAATTTGATGCACAGCTTACTAACTTATATATGTTACTAAGAAGACTACTTAGTTGATAGTAGCATTTTCAGTAAATAAAGGCAAAGAAGCCATTTGCTTGCTCAATATTAAGCCCATATGATATTGTTCAGTGTTACTTCTATTAGTTATGCCTTTTTAGATATTGAAAGATGCTTCTTGAGTGTAGATTATGCAAATGGCAAATCATATTTTAGAGTGGCTGCTCATGAGAACTTAAAAAGAACGAAGGTGATATTTCTTTTTTCACTTTTATTGTTATTATTATTATTTTAAATATACCATGTTGAGAAAAACACATTCAGATTCCACTATCTTGGCCAATAGAATTAGAAGTATATTGCATTACATCATTCCCAACCAATTGACCATAGTTTTTATTTTATTTTATATTTTATATATATATTTTTTATGCTTTCTCCCAATTGTCCATTCGAGGCATTGTCATATTTTTAGTTAAAAAGAATCTTTTTACTTTTCATTCTTAAAAGAAGTGATTTCATATCAGTTTCACCGTGGGACCACTTCAATTCTTTCTAAATTTTCCATTTTTCATTTATTTGAACTTTGAAGATATGAATTATTGTGAGGAGAAAAATCCCTAAATTTCTTACCTTTTAAAAGTTTTATTAATATAACATTCTACCTCAAAATGTTTTTTAAAAAAATATTCTTATGGCTAGTATGGAAGGAAAACTATTACTACTCTGTTTAAAAAATGAATTTGAACTTTCAAACATTATTATAATACTCTTAAGCTTAATATGTATATGGGAATTTTCATGGATATTACAAAACTGTAAACTATTTACGGTCCGTATAACAAGTTCATTAAGTCAAATTATTTTTTTAAAATTTCTTATTTGTTCTTACTCTTTTAAAATAATCTTTTAAATACGATAGTTCTTTTTCTCGATTTTTTCATGATCGTTGTTTTCGAGTTATTCATCTCGTCTTTTATATATCTTTTATCTTGATCATTCTTTGTATTTTTCATAATTTTCGACAACATTCGCTCTTATATTCATCATCTTCGATAACATCGTTTCTCTTCTTGTCATATTGGACAATCAAGATCGTTTATATTGCAATGTTAATATCATCTCAGTGATTTTGGTTTCGGTGAGTATTCTAAATATTTTTTTTTGTTTGAACTATTTAGTCGATTATAAAATTTCGTTCATAATTATATATTTCGACGTCTAGATAGAATGTTTAGAATATGTAGGTATTAATATAAGACATCCAGTATTTCGTTATGAAGATCGTTGAAGATTTTGATGATTGTTTACGTCGAACTAAGAATTTATATTTCAGTATAAATGTTGTTTTTGTTTTTTGTTCTTTGTCATAATTTAAAGTTTTTTTTTCGTTTAGAACTTTTAAGAATCATGCTAAGAATTGTATATTTCATTATGACAATCGATAGGTTGAAGTTTTTCACGATAATTTTTATTGAATTACTTGGTCATTTACCTCTATCAACATCATTGTTTATCAATACAGAGACGATTTTTTTGCTATATGAACACGATCATTCATCTTTATGAACCCGAAAATTTTCAATATTTTGTATGATCATCATCTTTAAACGACCATGTATCTAAGTCAATACGATAGCGTCTTTAAACGATTGTTTAGTTTATTTTATACGATAGTTTAATTTATTTTTGTTGGAATTTATATGTTAAAACTCATAGTTTGTAATTATATTATATTCAATAAAGTCGTTATTGAGAAATTAAATACTATAATCTTAAATCTAATAAACTAAGATCCCAATGCTATTTTGAGTAAACTTGAACTTTATATAGAGACATAAACATGGATTAAGTTCGAGTAAATAGCCTAAATAGTCTATAGTATATGGATAAAGGTTGGGCGCCTTATTTAGAGATATTATGGATGCGACCCGCTTTGTAGTTAGTACAAACGAGATAATCCTAAATTGTTAATGTAGAGACATGAAAGTGAGGGCATTCTATGTAAAGCGTTTACATAAGACAGAACCATGAAATAGTCACTTTTACGTTATAACGCCGTCTACTGTTCAAAATTGACTATCTCGATTATTGATGACCTAGGTAACTTAATCTTAATCTTGAGCTAACTGTGAATTCCTGTTCACATGAGATTATTCTTAAATCTGCAATAAGTGAGGACAACTCATTAGCATTAGCCCAATAAGCTTTCCATTTTAGGGGTAAGATCGGTGGATAGTTAGGAACATAGGGTGCACGACAAAATTCACTCTTACCCTCTTTAGGGTTAGTAGATAAGTTGTTTCCTTAAGGACTGAATCTAAATCTTGAACAAAGGGGTCCTACGCTCTCATTGGCACGAGAGGGATTCGGTTTATAGGTTGTACCTTAAAATCAATTATTCAATAGTGGATCAGAGGGACTTAAGGAGAAAAATGTAGTCTTAGGGGTAAAATGGTACTTTTTGACCCATCCACGCTTACAAACAACCTGTGAAGGATTAACTTATTGATCCTGGTTATATCAAATGGACACAAATATATGTATAGTGAGGGAGTGCAACTACGGGACTTTAGTGGAATGACTCGTTTAGTTAACGAATGTTGATTAACTTGGTATAAAAGAGTTTCGTCTGTTAATCTCAGATCATTGGAGCCCATGATCTATAGGTCCATTAGGTTCCTCTGCTAGCTCATATGGAATAAACTTAGAATAGTACGATGGAATGAGTTGAATTGTTTGAAATAGGAGAGGAGAGGAAAACTGACAAGTATATGTGATATCTGTCGGTTTTAGATTACTAATAGAGTTTTATGCTTAAATGAGATTTCAATATTAAAGATATGAATGTGGATTCATACTCGGAAGCTCAAAAAAGATGGAAATAGTCAAAATTGGGCTCTTAGGGCTTTAAGAAAAAGGCTTGGTAATTTTTCTTAAACTACATTGGGCTATAATATTTTTTATTTGGTTCTCTATAATCAAATATTAAAACCCAACCCTTATCCATATTTTTTCCATATTTTTTCTCTCTTCCAGTTTTCTTCATCCAACGGGTCCCACAACCCGGTTCTGAGTTCGGAGGATAGTAGATCAACCTTAGTGGTGATTCAAGCATCAATCGAAGCTCAACGTAAGTTTTTCTTAAAAAATCCTATATTTAACTTTATTTCGATTTATGGTTTATTGTTAATTAATTACAATTAGGGTAGAATTTCGGTATTTCTTCCGCTCTGCTCGTTAATCTCTATTATTTTATATGATTGTCTGTTGTTGTTAAATGACCGTTTAGTATTTATTATCTTTTTTGTACAATCATTTATTTATTTTTTGCATTGTGTTTATTTTTATTGTTTAATACATTTTATTCTCTTATTTTGTGATAGATATCTATCTAATTCTTCTTTTCACCATTAAATACTTAATTATATTTGTTCCATATTAGAATGTCTATTCCTATTGTTGTTTTTTATGGAGGTCAATGGAATGACTGTAATGTTCATGAGAATTACTTAGTGTTCGGAATTTTGGTAGATATGCGAATCAACTTTAATTCTTTGGTTGTTTTAGCATGTAAACAAATTGAATTGGATGAATCAGTAAAATTATCTGTTTTACTTGATTTTGGTAAAACCAATGTACAAACTGTGATGCCAATAAAGAAAGACAATGATGTTGTTTGGTATTTAACTTTTGCTAAAGATGCAACTAGTAGACATCCATTAGCTGCCCATGTAAGTGTTAATTGTTTGAGAATGTGTTCTTCATCTAGTAGTGTACGGGAGAATGTTGATATGTCACTCAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAAACATTTCTTATTATTCAGGTTTCAAGGAAAAAAGTTTATTTCAATGTAAATAAGTACTTTCAAAGTGTTTTTCCATAATAGCAGCGAAAACCAGCTTTCAATTTAGGACTACAGTATCAAATTTGAGGTATCTTGAATTTAGATGTCTGTAAGAAGGCTGCAATGGTATGTTCGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATACACTTTTGACCATGATTGTTCGTTGAGTACTGCCCAAAGTTCTCAATTGCATACTTCTTCAATAGTAATTGGTAGCTGTTTGATAGATAATTTTAGATTTATGTCTACTAATCGTTCCATTCCTAAAGAGATTGTGCGTAAGACTTGTACAAATCTTGGAGTTAATATAAGTTAGTAAAAAGCTTGGAGGGCGAAAGAACATATGGTAAAGATATTACACGGTGGTGTAGTTGAATCATATGCATTGATGCAAAGATTCTTTGATAAATTGGTTGAACATAACACATGTATGATCAGTTTTGTATATCAAATTTAAATTCATTTGCAGATAGATGTGGATGGACTAATATCATAGTCTATCTAGATAGACCAATATTAGCATATTTCACATTCTTTCTATTATTTTTTGTTCGTGTCAATAGATATGTGTTTGTAATTACTATAGTTACATACACTGTTTTAGAAATGGATGATATTTGTCATTTCAAGTTTTCTTTTATGACTTTTGGTGCTTCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATGAGACATTTTTGAAGTGTGAGTTTGGTAGCATCTTATTAACAGCCTCATCACAAGATGGTAAAAATAAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGTATCATGGACATGGTTTTTTTAGAAGATACGAGGTAGTTTTTCAGAGTGGGCTAATTTAGTCATTGTTTCGTACACACATCTTAGCATCCCTAAAGGAGTTTTAAGAGTGTTTCCTGAGATTGAGTATTGTGTGTGCAAAAAACATCTTTTAAGTAACTTGAAGCTCCATTTTAAAGATCCATTACTTGATAAATATTTTTTTAGCTGTGCTTATGCTTACACCGTTGATGAATTTGAGTACTACATGAGATGCATGGAGTCTGTTTGTCCAAATATCAGAGATTATCTTAGTAGTGTTGGTTGTGAGAAGTGGTATCAGACATTTTCACGTAGACAAAGGTATAGAATGATGATATCAAATTGTGCCAAAAGTGTAAATTCAGTGTTTAAAGATCTTAGAGAACTACCTGTGGTTACGATGCTTAGTTCAATTAGGGATGTATTGCAAAAGTGATTTTATGAACGAAGTAAAGTTGCTTCTACAATGAAGAGTCGTTTGACTTCTTGGATTGAGAATGTTTTGCGTTTAGAATATGAAAAGTCGAGAAGATTATTGATAAGTTTTTTTTATCTCGGACGATTAAAGATAGATTGCTATCTTTGTCTATCCGATAGATATATATATCAAATTTTCTCTTCATGTTTTAAATAAGCACAGATAAATTGCTACCTATATATATCTGATGTATACAGAGATTGAAATCTATTTGTTATTATTTTATTAATTGTCCTTATTTGTCTTACGTATTAGGTTGATCCAATTATTATGATTGAATACCAAGTAACATATAGAAATCAATAGTTTATTGTGAAGTTAAATGTGGGATGTTGTAGTTATCGAGTATGGGATGTTGAAGAAATTTCTTGTGCGCATGCTCTTGCTGTTCTACGAATGCTTAATTTAGATACCTATTCTTATGTATTTGAGTTTTATTATAGAGAAATACTATCAACAACATACAATGGTTGTATTCAACCTGTTGGATCTTATTTCGATTGGAGAGTTGTAGATTCTGTCATGAAAATATTACCTCAAGTCGTTAAACGGTAATCTGGAAGACCAAGAAAACAAAGAATTCCATCTGTTGGTGAGTTTAGTAGTTCAACCAGATAGTCCAATTGTAATTGTGGAGGACATAATAGTAAGAATTGTAAGCAAGGTTTGGACAATTAATGAAAATTTGTAATCTCTTTCATTCATTATTATGTATAAATGTTTGATATCAAAGTTGATGGAGATTTAATATCGTTTAGACATTAGTGTGGTATATAAACGATCGT

mRNA sequence

GTTTTGAAGGATATACCCAATTCCATTATTTTTATTTTTATTTTTATTTTATTATTCAGTATTCCTCTTCCTTCCTTCCTCCTATTCCCACTTTCACTACAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCCCCGCCCCTCCCGTCACTCTTCCCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCCGCTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCTAATTTGATCATGGAACACCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGATGATAATGAATACGACCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTCTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCACAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTCTCAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCATAATCGTATAAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATTTGGTGGGTATTTGGATTCTATTGGATTGTGATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTGGCAGTGGTTTTCTTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTATTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTACAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCCCTCTGCAAATTCAGCATCGGACAAGGGGATTCCTTGGTCTGATTCAACTTTTGATCGAGTCGGAGCATTCTTGAGGCTGGGACAAGATCTTTGACAACGTAACCACACAGATTATGCAAATGGCAAATCATATTTTAGAGTGGCTGCTCATGAGAACTTAAAAAGAACGAAGTTTTCTTCATCCAACGGGTCCCACAACCCGGTTCTGAGTTCGGAGGATAGTAGATCAACCTTAGTGGTGATTCAAGCATCAATCGAAGCTCAACAAATACTATCAACAACATACAATGGTTGTATTCAACCTGTTGGATCTTATTTCGATTGGAGAGTTGTAGATTCTGTCATGAAAATATTACCTCAAGTCGTTAAACGGTAATCTGGAAGACCAAGAAAACAAAGAATTCCATCTGTTGGTGAGTTTAGTAGTTCAACCAGATAGTCCAATTGTAATTGTGGAGGACATAATAGTAAGAATTGTAAGCAAGGTTTGGACAATTAATGAAAATTTGTAATCTCTTTCATTCATTATTATGTATAAATGTTTGATATCAAAGTTGATGGAGATTTAATATCGTTTAGACATTAGTGTGGTATATAAACGATCGT

Coding sequence (CDS)

ATGGACGACGTTCGACCATCCAACTCCGCTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCTAATTTGATCATGGAACACCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGATGATAATGAATACGACCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTCTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCACAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTCTCAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCATAATCGTATAAGAGTTATGAAAAGGTTGGAAGCACTGAACACAATGGTAGCATATATTTGGTGGGTATTTGGATTCTATTGGATTGTGATGGGTGGCCAAGCTCTTCTGGAAGGTTCTCCCCGACTGTACTGGTTGGCAGTGGTTTTCTTAGCCTTTGATGTGTTTTTTATTATCTTCTGCACCGGGATGGCGTTTGTTGGTTTATTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGAATTTCCTAGAAGGTGCCTCTGAGGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTCGTTCGACAATGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAATGGTCATACAACTGAACACACTCTAAATGCAGAGGACTCGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTACAATTGTGCATGCTTCCTTGTAATCATCATTTCCATACTCGATGCATTGTCAAATGGCTTCGAATAAACGCAACCTGCCCCCTCTGCAAATTCAGCATCGGACAAGGGGATTCCTTGGTCTGA

Protein sequence

MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV

Homology

[Close]

BLAST of Cmc08g0223581 vs. NCBI nr
Match: XP_004144310.1 (E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical protein Csa_012005 [Cucumis sativus])

HSP 1 Score: 709.9 bits (1831), Expect = 1.1e-200
Identity = 342/347 (98.56%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG FAVCCIIPFLAYGYTMNFLE
Sbjct: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. NCBI nr
Match: XP_038881255.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 690.6 bits (1781), Expect = 6.7e-195
Identity = 330/347 (95.10%), Postives = 340/347 (97.98%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDD RPS+++FLSWQRT+SSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD
Sbjct: 1   MDDGRPSSTSFLSWQRTISSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRS+RYR GFENRGAQDE RLSH+RIRVMKRLEALNTM+AYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSNRYRFGFENRGAQDEFRLSHHRIRVMKRLEALNTMIAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG FAVCCI+PFLAYGYTM FLE
Sbjct: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIVPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLESFD+DKKQEVGMTLEPGY+GHTTEHTLN EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLESFDSDKKQEVGMTLEPGYSGHTTEHTLNPEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. NCBI nr
Match: XP_022154475.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 658.3 bits (1697), Expect = 3.7e-185
Identity = 312/347 (89.91%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD+ RPS++ F+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDE+D+ EYD
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR MKRLEALNTMVAYIWWVFGFY I
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGFYLI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQAL+EGSPRLYWLAV+FLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTM FLE
Sbjct: 181 VMGGQALVEGSPRLYWLAVIFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLE FD+DK QE+GMTLEPG+N HTTEHTL+ EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLEPFDSDKNQEIGMTLEPGFNDHTTEHTLHPEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPC HHFHTRCIVKWLRINATCPLCKF+IGQGD+LV
Sbjct: 301 AQYVHGVQLCMLPCTHHFHTRCIVKWLRINATCPLCKFTIGQGDTLV 347

[Close]

BLAST of Cmc08g0223581 vs. NCBI nr
Match: XP_023543467.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.3 bits (1653), Expect = 4.7e-180
Identity = 307/347 (88.47%), Postives = 322/347 (92.80%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD  RPS++ FLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SV VLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR +KRLEA NTM++YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           V GGQ+LLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG F VCCIIPFLAYGYTM FLE
Sbjct: 181 VTGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNTEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFSIG GDSLV
Sbjct: 301 AQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSIGHGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. NCBI nr
Match: XP_022949865.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata] >KAG6603427.1 E3 ubiquitin protein ligase RIE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 641.0 bits (1652), Expect = 6.1e-180
Identity = 306/347 (88.18%), Postives = 322/347 (92.80%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD  RPS++ FLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SV VLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR +KRLEA NTM++YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           V GGQ+LLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG F VCCIIPFLAYGYTM FLE
Sbjct: 181 VTGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNTEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFS+G GDSLV
Sbjct: 301 AQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSVGHGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.3e-63
Identity = 135/354 (38.14%), Postives = 192/354 (54.24%), Query Frame = 0


Query: 26  LIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLF 85
           L + ++  +M    ++  + A  ++++ + D  Y             KP++VLD+ WNL 
Sbjct: 63  LSRASSGRVMREPSMLVREAAAEQLEERQSDWAYS------------KPVVVLDIVWNLA 122

Query: 86  FVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSR----------- 145
           FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y RR+ R           
Sbjct: 123 FVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPP 182

Query: 146 ----------------YRLGFENRGAQDELRLSH---NRIRVMKRLEALNTMVAYIWWVF 205
                             LG        +L L H       V K LE+ NTM ++IWW+ 
Sbjct: 183 RSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWII 242

Query: 206 GFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIP-FLAYGY 265
           GFYW+  GGQ L + SPR+YWL++VFL FDVFF++FC  +A V   AVCC +P  +A  Y
Sbjct: 243 GFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLY 302

Query: 266 TMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEV--GMTLEPGYNGHTTEHTLNAE 325
            +   EGAS+++I  L K++F +        ND+ Q    G+  E G +    EHTL  E
Sbjct: 303 AVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS-PIEHTLLQE 362

Query: 326 DSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSL 347
           D+ CCICL+ Y  G +L  LPC HHFH  C+ KWL INATCPLCK++I +  +L
Sbjct: 363 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNL 403

[Close]

BLAST of Cmc08g0223581 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 126/283 (44.52%), Postives = 171/283 (60.42%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSSRYR------LGFENRGAQDELRLSHNRIR-----VMKRLEALNTMVAYIWWVFGFY 189
           RR  R         G  N  +Q  + L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

Query: 190 WIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIP-FLAYGYTMN 249
           W+  GGQ L   SP+LYWL ++FL FDVFF++FC  +A V   AVCC +P  +A  Y + 
Sbjct: 224 WVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVA 283

Query: 250 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 309
             EGAS+++I  +PK+RF +   +E      +   G+  E G +    E +L+ ED+ CC
Sbjct: 284 DQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR---GIMTECGTDS-PIERSLSPEDAECC 343

Query: 310 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
           ICL +Y  GV+L  LPCNHHFH  CI KWL IN+ CPLCKF+I
Sbjct: 344 ICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382

[Close]

BLAST of Cmc08g0223581 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 7.0e-62
Identity = 139/358 (38.83%), Postives = 198/358 (55.31%), Query Frame = 0


Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSS 135
           P++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+ H+  V V Y RR+S
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRLGFENRGA------------QDELRLSHN--------------RIRVMKRLEALNTM 195
           R R     R +            ++ L LS N                   K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

Query: 196 VAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCII 255
           +++IWWV GFYW+  GGQ L +GSP+LYWL +VFL FDVFF++FC  +A V   AVCC +
Sbjct: 205 ISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCL 264

Query: 256 P-FLAYGYTMNFLEGASEDEIRALPKYRFHQ--DNPLESFDNDKKQ--EVGMTLEPGYNG 315
           P  +A  Y +   EGAS+++I  L K++F +  D    + D ++ Q    G+  E G + 
Sbjct: 265 PCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS 324

Query: 316 HTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
              EH L  ED+ CCICL+ Y    +L  LPC HHFH  C+ KWL INATCPLCK++I
Sbjct: 325 -PVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

[Close]

BLAST of Cmc08g0223581 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.2e-59
Identity = 122/295 (41.36%), Postives = 176/295 (59.66%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S  +LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSR-------------YRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGF 190
           R+S              Y + ++     D+   +++    +KR E++NT++++IWW+ GF
Sbjct: 133 RNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYS---FVKRCESINTVISFIWWIIGF 192

Query: 191 YWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIP-FLAYGYTM 250
           YW+V GG  LL  +P LYWL+V+FLA DVFF +FC  +A +   A+CC +P  +A  Y +
Sbjct: 193 YWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAV 252

Query: 251 NFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPG------YNG--HTTEHT 310
              EG SE E+  LP Y+F      ++F +++K   G    PG       NG    TE T
Sbjct: 253 AGTEGVSEAELGVLPLYKF------KAFHSNEKNITG----PGKMVPIPINGLCLATERT 312

Query: 311 LNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQG 344
           L AED+ CCICL+ Y  G +L  LPCNHHFH+ CIVKWL++ ATCPLCK++I +G
Sbjct: 313 LLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKG 354

[Close]

BLAST of Cmc08g0223581 vs. ExPASy Swiss-Prot
Match: Q7T037 (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-10
Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           G + +E  +LP     Q   L   D+D  Q  G+T E   N  T  +  N     C +C+
Sbjct: 650 GVTLEESGSLPFLSLAQFFLLNEDDDD--QPRGLTKEQIDNLSTRNYGENDALKTCSVCI 709

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI---GQGDSLV 348
            +Y  G +L  LPC+H +H  CI +WL  N+TCP+C+ ++   G  +S+V
Sbjct: 710 TEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAGNRESIV 757

[Close]

BLAST of Cmc08g0223581 vs. ExPASy TrEMBL
Match: A0A0A0KYD1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 5.2e-201
Identity = 342/347 (98.56%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG FAVCCIIPFLAYGYTMNFLE
Sbjct: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMNFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Sbjct: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. ExPASy TrEMBL
Match: A0A6J1DJQ2 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111021746 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.8e-185
Identity = 312/347 (89.91%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD+ RPS++ F+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDE+D+ EYD
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR MKRLEALNTMVAYIWWVFGFY I
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGFYLI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQAL+EGSPRLYWLAV+FLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTM FLE
Sbjct: 181 VMGGQALVEGSPRLYWLAVIFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLE FD+DK QE+GMTLEPG+N HTTEHTL+ EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLEPFDSDKNQEIGMTLEPGFNDHTTEHTLHPEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPC HHFHTRCIVKWLRINATCPLCKF+IGQGD+LV
Sbjct: 301 AQYVHGVQLCMLPCTHHFHTRCIVKWLRINATCPLCKFTIGQGDTLV 347

[Close]

BLAST of Cmc08g0223581 vs. ExPASy TrEMBL
Match: A0A6J1GE01 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC111453131 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.9e-180
Identity = 306/347 (88.18%), Postives = 322/347 (92.80%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD  RPS++ FLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SV VLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR +KRLEA NTM++YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           V GGQ+LLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG F VCCIIPFLAYGYTM FLE
Sbjct: 181 VTGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNTEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFS+G GDSLV
Sbjct: 301 AQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSVGHGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. ExPASy TrEMBL
Match: A0A6J1HW81 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111467225 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 3.8e-180
Identity = 306/347 (88.18%), Postives = 322/347 (92.80%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD  RP ++ FLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPLSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SV VLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR +KRLEA NTM++YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQ+LLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG F VCCIIPFLAYGYTM FLE
Sbjct: 181 VMGGQSLLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFTVCCIIPFLAYGYTMTFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRF QDNPLESFD+DKK EVGMTLEPGYNG+TTEH LN EDSACCICL
Sbjct: 241 GASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNPEDSACCICL 300

Query: 301 AQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV 348
           AQYVHGVQLCMLPC+HHFHTRCIVKWLRINATCPLCKFS+G GDSLV
Sbjct: 301 AQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCKFSVGHGDSLV 347

[Close]

BLAST of Cmc08g0223581 vs. ExPASy TrEMBL
Match: A0A5A7SMU7 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00840 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.6e-180
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240
           VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE
Sbjct: 181 VMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIPFLAYGYTMNFLE 240

Query: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300
           GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL
Sbjct: 241 GASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICL 300

Query: 301 AQYVHGVQLCMLP 314
           AQYVHGVQLCMLP
Sbjct: 301 AQYVHGVQLCMLP 313

[Close]

BLAST of Cmc08g0223581 vs. TAIR 10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 251.9 bits (642), Expect = 7.4e-67
Identity = 125/285 (43.86%), Postives = 182/285 (63.86%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++ LD+ WN  FV +++ +L++  EEKP  P+R W+ GYA+QCL HV  V++ + +
Sbjct: 64  YSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRK 123

Query: 131 RSSRYRLG------FENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGG 190
           R++R R G        N+ ++DE   +  R    K  E++NT+++++WW+ GFYW+V GG
Sbjct: 124 RNARSRPGDLEAAQATNQDSEDE--DNDERFLSTKTCESMNTIISFVWWIVGFYWLVSGG 183

Query: 191 QALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIP-FLAYGYTMNFLEGAS 250
             LL+ +  LYWL  VFLAFDVFF IFC  +A +   A+CC +P  +A  Y +   EGAS
Sbjct: 184 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGAS 243

Query: 251 EDEIRALPKYRFHQDNPLESFDNDKKQEVG----MTLEPGYNGHTTEHTLNAEDSACCIC 310
           E ++  LPKYRFH      + +ND+KQ  G    + ++        E  L  ED+ CCIC
Sbjct: 244 EADLSILPKYRFH------TMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCIC 303

Query: 311 LAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGD 345
           L+ Y  G +L  LPCNHHFH+ CIVKWL++NATCPLCKF+I +G+
Sbjct: 304 LSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGN 340

[Close]

BLAST of Cmc08g0223581 vs. TAIR 10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 242.3 bits (617), Expect = 5.9e-64
Identity = 135/354 (38.14%), Postives = 192/354 (54.24%), Query Frame = 0


Query: 26  LIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLF 85
           L + ++  +M    ++  + A  ++++ + D  Y             KP++VLD+ WNL 
Sbjct: 63  LSRASSGRVMREPSMLVREAAAEQLEERQSDWAYS------------KPVVVLDIVWNLA 122

Query: 86  FVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSR----------- 145
           FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y RR+ R           
Sbjct: 123 FVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPP 182

Query: 146 ----------------YRLGFENRGAQDELRLSH---NRIRVMKRLEALNTMVAYIWWVF 205
                             LG        +L L H       V K LE+ NTM ++IWW+ 
Sbjct: 183 RSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWII 242

Query: 206 GFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIP-FLAYGY 265
           GFYW+  GGQ L + SPR+YWL++VFL FDVFF++FC  +A V   AVCC +P  +A  Y
Sbjct: 243 GFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLY 302

Query: 266 TMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEV--GMTLEPGYNGHTTEHTLNAE 325
            +   EGAS+++I  L K++F +        ND+ Q    G+  E G +    EHTL  E
Sbjct: 303 AVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS-PIEHTLLQE 362

Query: 326 DSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSL 347
           D+ CCICL+ Y  G +L  LPC HHFH  C+ KWL INATCPLCK++I +  +L
Sbjct: 363 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNL 403

[Close]

BLAST of Cmc08g0223581 vs. TAIR 10
Match: AT1G12760.2 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 241.9 bits (616), Expect = 7.7e-64
Identity = 130/310 (41.94%), Postives = 177/310 (57.10%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++VLD+ WNL FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y 
Sbjct: 24  AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 83

Query: 130 RRSSR---------------------------YRLGFENRGAQDELRLSH---NRIRVMK 189
           RR+ R                             LG        +L L H       V K
Sbjct: 84  RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 143

Query: 190 RLEALNTMVAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVG 249
            LE+ NTM ++IWW+ GFYW+  GGQ L + SPR+YWL++VFL FDVFF++FC  +A V 
Sbjct: 144 HLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVI 203

Query: 250 LFAVCCIIP-FLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEV--GMTL 309
             AVCC +P  +A  Y +   EGAS+++I  L K++F +        ND+ Q    G+  
Sbjct: 204 GIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMT 263

Query: 310 EPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLC 347
           E G +    EHTL  ED+ CCICL+ Y  G +L  LPC HHFH  C+ KWL INATCPLC
Sbjct: 264 ECGTDS-PIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLC 323

[Close]

BLAST of Cmc08g0223581 vs. TAIR 10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 241.9 bits (616), Expect = 7.7e-64
Identity = 126/283 (44.52%), Postives = 171/283 (60.42%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSSRYR------LGFENRGAQDELRLSHNRIR-----VMKRLEALNTMVAYIWWVFGFY 189
           RR  R         G  N  +Q  + L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

Query: 190 WIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCIIP-FLAYGYTMN 249
           W+  GGQ L   SP+LYWL ++FL FDVFF++FC  +A V   AVCC +P  +A  Y + 
Sbjct: 224 WVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVA 283

Query: 250 FLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACC 309
             EGAS+++I  +PK+RF +   +E      +   G+  E G +    E +L+ ED+ CC
Sbjct: 284 DQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR---GIMTECGTDS-PIERSLSPEDAECC 343

Query: 310 ICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
           ICL +Y  GV+L  LPCNHHFH  CI KWL IN+ CPLCKF+I
Sbjct: 344 ICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382

[Close]

BLAST of Cmc08g0223581 vs. TAIR 10
Match: AT1G63170.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 239.2 bits (609), Expect = 5.0e-63
Identity = 139/358 (38.83%), Postives = 198/358 (55.31%), Query Frame = 0


Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSS 135
           P++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+ H+  V V Y RR+S
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRLGFENRGA------------QDELRLSHN--------------RIRVMKRLEALNTM 195
           R R     R +            ++ L LS N                   K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

Query: 196 VAYIWWVFGFYWIVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGLFAVCCII 255
           +++IWWV GFYW+  GGQ L +GSP+LYWL +VFL FDVFF++FC  +A V   AVCC +
Sbjct: 205 ISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCL 264

Query: 256 P-FLAYGYTMNFLEGASEDEIRALPKYRFHQ--DNPLESFDNDKKQ--EVGMTLEPGYNG 315
           P  +A  Y +   EGAS+++I  L K++F +  D    + D ++ Q    G+  E G + 
Sbjct: 265 PCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS 324

Query: 316 HTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSI 341
              EH L  ED+ CCICL+ Y    +L  LPC HHFH  C+ KWL INATCPLCK++I
Sbjct: 325 -PVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNI 369

The following BLAST results are available for this feature:

BLAST of Cmc08g0223581 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144310.1	1.1e-200	98.56	E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical...	[more]
XP_038881255.1	6.7e-195	95.10	E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida]	[more]
XP_022154475.1	3.7e-185	89.91	E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia]	[more]
XP_023543467.1	4.7e-180	88.47	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949865.1	6.1e-180	88.18	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata] >KAG6603427.1 E3...	[more]

BLAST of Cmc08g0223581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN71	8.3e-63	38.14	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q93Z92	1.1e-62	44.52	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q8LDB8	7.0e-62	38.83	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q8GUU2	7.2e-59	41.36	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]
Q7T037	1.6e-10	33.64	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV...	[more]

BLAST of Cmc08g0223581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD1	5.2e-201	98.56	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 P...	[more]
A0A6J1DJQ2	1.8e-185	89.91	E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1GE01	2.9e-180	88.18	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HW81	3.8e-180	88.18	E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7SMU7	6.6e-180	100.00	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Cmc08g0223581 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68070.1	7.4e-67	43.86	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G12760.1	5.9e-64	38.14	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G12760.2	7.7e-64	41.94	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT4G11680.1	7.7e-64	44.52	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G63170.1	5.0e-63	38.83	Zinc finger, C3HC4 type (RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 296..336 e-value: 2.4E-5 score: 33.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 295..337 e-value: 1.3E-10 score: 41.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 296..337 score: 12.297489
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 277..344 e-value: 3.3E-17 score: 63.5
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 8..347
None	No IPR available	PANTHER	PTHR45977:SF19	RING-FINGER UBIQUITIN LIGASE	coord: 8..347
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 283..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0223581.1	Cmc08g0223581.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane