Cmc08g0223481 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0223481
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 12983513 .. 12986156 (+)
RNA-Seq ExpressionCmc08g0223481
SyntenyCmc08g0223481
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTGAGTAACCACACACTTCCCGTAGACACGATGGCAAATGGTGTGTCACCGATCTGGAATGATTCAAACTTTACAACAACATGTTTAATATCCTTCTACCCTTTCTTCTTCTACTTGCATCTCAATCTCTGTAGTCCTTTCATCCATCAATGTTGCATTGCTTCAACTCCTCTCAATTTCACCTTCCTCAAATGCTACATCTCCAGCTTGTAAGCCAATCGCCATTCATCAATGCTCCTCATTTGATATTTATCAAGTGGTGGAAGCGCCGTCTTTTCTATGACATCCAAAATCCTCCCTGTTTTCCCAAGAATGTAAGCAGCTTCTCTCACGCTCTTCTCTCGTTTCTCAATCACAAAGTTTGCACATTTTGTTGATATCACTTTCTCCAAATTCGTCAAGCATGCTCCCATTATGCCAGAAATCGTGGCTTCCATTTCTAAGAACAATTGTTCGTTTGTATACCGGTATTTCTTTTCGTACTTTAGCAGCATCGATTCGCTTATCCTGTACATACAGTTCGCAGCCAATATCTTGATTGGCCATTTTGAAGTACTTAGTTTCAAGCATAGATGTTCATTAGTAGTCTTCTCCTCTGTGTAAATTTTCTTTGCTTCATCTGAAAATTGTTGGAAAACTTCGTTTGGGGTTTCTTTATGATGTGAAATTTTGTGGAGGTCTATGCCTAGCCATTGATTGTTGAGATCCATTCCTAGCCAAACCATTTCTGCTGCCTTTTTTAGGTTTATGAAATTCCCTTCCGTGTCGAAGCAATCTTCGATGCGTCTTATGTAGCGGAGACCTTCATTTACTGCGGTCACCAAGTGTTTGATTAAATGACGTCTTATGTTTGGAAGAGAAATTGCTATGGCTGTTAATGTCACCACAGGAAGCGCCCAGCAATTCGGGGGCTCTTTGGAATCTAGACATGGAACTTGATGGTTATCAAACTCTGCCACTCCCTTGAAACCTTGTGATATGATCGTTCCTTCCAATAGGTGAATGAGAATCTTAGGTTTTTTCTTCTGCCCTTTCTGAATCCAATGATGTACGGCATGATAATTGTTTGTTACCATCACGTGAACTAGATCATCTTCACCTTCAAGATACAGAACGAAACGACTTAGATCTAGCTTTGAATCAGCATCATCTTCTGACCCTGAATTGCTGAGAGAAATGGTGCTGTTAAACCACAGCTTGTTTTTCAAACTCTTGAAACAGTCGCAGCATGAGAAGATTCCTCTGAAAAAGAAAATGGAAATAAGCCGAATCACTTTGCTTATAAACACTATTACCGTTTGTAGGATGATACATGCATCCAGAAACGTGTTTCTTGCATTATGAGCAAGCTTTCTGCATCCTCTATTTTTAACTCTGATAGTTAATGGAGACTCTTTCATCTCTACTAGATATCGAATCCAATAGTATTCTAATTTGAATTCCTTCTTGTAACCCCCATTTCTCAGGTTTGGACACCTGAATTTTATAGCTGTAAACCATCTGATTGCCGGGGCGACAGTCCCTACTACAACTGCTACACACTGTATCACGAGGATAAAAGTGATTGACCACTTATAATCAGACTGGCCGTTGCAGAACTTAAATGATCTCTTCATCAAGTAGGATGTAAGAATAGCCTCTGCTAAAATTGCAGCGCTAAGAAGACTGATCGCCCCAGAAGCAGTACATGTGGCGGATCGGCCCATCACAAACTGGGGACTGGTTGTTTGAGCCATCATCCAATATTTCATCAAACCCACTTTGAGTCTTTCGATGACTAGTTTGTCTCCTTTTCCATTTGCTGCACACTCTTTTGATGCTAATTCATGTCTTACGCCATACTTCATTTCCAGGTAGCTCTTAGTTGATGGAACAACCGAAGCAGACAAACTCAAGATACCCAGTAAAACAAGCATCAAGATTAGAACGGAAACGTGCTCTTTCATATAAACGTAGACCACTCCAGTACCCATCTCCATACCGACGTTTACGATGAGGGTAATAACAAGAATCCCTAGAGCCATAACATTCATAAAAATTTCTTGATTTTCCATAGACCCAAGAGAAGGCATACAATTAGCCATGATGGTGCACATCAACACAGCACTACTTAGCTTTGCAAGCTGATCCTCTCTGCCAGGCATGGAGGTGTTGAGATCCACAGAAAGCTTGATTGCCACAGCTATCAGGGTTAGGGAAGTGGAGTTAAGAGTGAAGAACTTACAGGGAAACCAGAATTTTCTGTGGAGGATGCCGTGGATGAGATCAGCAGCCATCGCTAAGAGGCAGACCAAAGAGGCTGCAGCTATGTAGATTCCAATCCATGGCAAGGGCTCGCTGTACTTGGCATCATTCAGGTACCCATCATTGTTGCAACCAACTACACCCATCTCTCTCTTGTTCTGCTTGTGTATCTAAATTGTTTGATCCAAATTTTGTGCTATATATTGAAGAAGTGTGGTTTCTTTATCAATCTCAAGTCTTGAAAATGGAGGTGCTTCATTGACTGGTTCAAATGGGTTAGGATGGACATTTCCCTGTTTATTATGGATAGTCAAAGTAGGGCCAATAGGAGGAAATTACAATATGAGTCACTTAACTTCAATAATTGAAGGGAAGTTTGTAGGGCATTCTTAAATATT

mRNA sequence

CTGTGAGTAACCACACACTTCCCGTAGACACGATGGCAAATGGTGTGTCACCGATCTGGAATGATTCAAACTTTACAACAACATGTTTAATATCCTTCTACCCTTTCTTCTTCTACTTGCATCTCAATCTCTGTAGTCCTTTCATCCATCAATGTTGCATTGCTTCAACTCCTCTCAATTTCACCTTCCTCAAATGCTACATCTCCAGCTTGTAAGCCAATCGCCATTCATCAATGCTCCTCATTTGATATTTATCAAGTGGTGGAAGCGCCGTCTTTTCTATGACATCCAAAATCCTCCCTGTTTTCCCAAGAATGTTTGGACACCTGAATTTTATAGCTGTAAACCATCTGATTGCCGGGGCGACAGTCCCTACTACAACTGCTACACACTGTATCACGAGGATAAAAGTGATTGACCACTTATAATCAGACTGGCCGTTGCAGAACTTAAATGATCTCTTCATCAAGTAGGATGTAAGAATAGCCTCTGCTAAAATTGCAGCGCTAAGAAGACTGATCGCCCCAGAAGCAGTACATGTGGCGGATCGGCCCATCACAAACTGGGGACTGGTTGTTTGAGCCATCATCCAATATTTCATCAAACCCACTTTGAGTCTTTCGATGACTAGTTTGTAGCTCTTAGTTGATGGAACAACCGAAGCAGACAAACTCAAGATACCCAGTAAAACAAGCATCAAGATTAGAACGGAAACGTGCTCTTTCATATAAACGTAGACCACTCCAGTACCCATCTCCATACCGACGTTTACGATGAGGGCATGGAGGTGTTGAGATCCACAGAAAGCTTGATTGCCACAGCTATCAGGGTTAGGGAAGTGGAGTTAAGAGTGAAGAACTTACAGGGAAACCAGAATTTTCTGTGGAGGATGCCGTGGATGAGATCAGCAGCCATCGCTAAGAGGCAGACCAAAGAGGCTGCAGCTATGTAGATTCCAATCCATGGCAAGGGCTCGCTGTACTTGGCATCATTCAGGTACCCATCATTGTTGCAACCAACTACACCCATCTCTCTCTTGTTCTGCTTGTGTATCTAAATTGTTTGATCCAAATTTTGTGCTATATATTGAAGAAGTGTGGTTTCTTTATCAATCTCAAGTCTTGAAAATGGAGGTGCTTCATTGACTGGTTCAAATGGGTTAGGATGGACATTTCCCTGTTTATTATGGATAGTCAAAGTAGGGCCAATAGGAGGAAATTACAATATGAGTCACTTAACTTCAATAATTGAAGGGAAGTTTGTAGGGCATTCTTAAATATT

Coding sequence (CDS)

ATGTTGCATTGCTTCAACTCCTCTCAATTTCACCTTCCTCAAATGCTACATCTCCAGCTTGTAAGCCAATCGCCATTCATCAATGCTCCTCATTTGATATTTATCAAGTGGTGGAAGCGCCGTCTTTTCTATGACATCCAAAATCCTCCCTGTTTTCCCAAGAATGTTTGGACACCTGAATTTTATAGCTGTAAACCATCTGATTGCCGGGGCGACAGTCCCTACTACAACTGCTACACACTGTATCACGAGGATAAAAGTGATTGA

Protein sequence

MLHCFNSSQFHLPQMLHLQLVSQSPFINAPHLIFIKWWKRRLFYDIQNPPCFPKNVWTPEFYSCKPSDCRGDSPYYNCYTLYHEDKSD
Homology
[Close]
BLAST of Cmc08g0223481 vs. NCBI nr
Match: KAG7027438.1 (hypothetical protein SDJN02_11451, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.8 bits (164), Expect = 5.4e-08
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 56  VWTPEFYSCKPSDCRGDSPYYNCYTLYHEDKSD 89
           +WTPEFY CKPSDC G+SPYY+C TLYHEDK+D
Sbjct: 159 LWTPEFYGCKPSDCWGNSPYYHCNTLYHEDKTD 191

The following BLAST results are available for this feature:
BLAST of Cmc08g0223481 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7027438.15.4e-0878.79hypothetical protein SDJN02_11451, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cmc08g0223481 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0223481 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0223481 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0223481.1Cmc08g0223481.1mRNA