Cmc08g0223061 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0223061
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 12266349 .. 12267317 (+)
RNA-Seq ExpressionCmc08g0223061
SyntenyCmc08g0223061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACTTCTAAATTTTGTCCCTAGAAAAGAAAAAAAAAAAAACATATTTATTATTTATTTTTCTAAACAGTAATTATCTTTTTCTTTCTTTTTTTTTCTTTTTCTAATCTGTCTTTCAGTTGTTTTAAGGGTTTTTCCAAAGTTAGAAACATAAAAGGGCTCTGAAATCAGCAACCAAAGAACTTTCCAACAACACACCCAGTAACCCATTTTTGTATTTTTTTTTACCTTCACCAAATCCTATGCATTTTGGACTCACTCTTCATTGATTCTACGCAAGCAGTGAAAAAGAAAATTAATTTTTTTGAGTGAGAGAGAAAGAAAGATGCAAACTTTGGAGTGAAAAGAGAAAACCCATTAACCCGGAAACCTTTTTATTTTGTTGCTAAGAAAAAAAAATGAAATTGAAGAACATTTCAGAGCTCATAAGTTTGTTTTTTCTTCTTATTCTTTTTCTTCTTCCCTTCAATATTGAAAGAATAATACCCACCTCCGCCATCGCTGCCGACGTAGATGCCGATTCCAATGTCCCCACCACTGCCACCGTCTTCCGCCCGAAAGACCACCACCACGACGGTCACGCTGCCGTGTTTGGCGCTCAGAAGAGAAGAGTCTACACTGGCCCAAATCCTCTTCATAACAGATAAGTAATTGAAGAAGCGGGGAAAAAAAAAAAAAGAAAAAGGAATTAAAATTTCTTCCTTCTTCATATATTCTTTTTTTATTTTACTTTTCTAGTAATATTTTTTTTGGGTTGAAAGTGAAATATTCTTCTTCTTCTTCTTCTTGCTCTTCTTGGTTGTACTCTCTGATGGAAAAGAGAATGATTATTGTTAATTATTTTATGTTGAAGTTATAATCCTCCCTATATATATATGTAAACGAGATTTTGTTTAGCAAAAAGTATATATAATAGTTTTCTGTTTGTAATTAAAAAGATTGAAATCAATGAATTATTTTGGTTTGGTTT

mRNA sequence

CTACTTCTAAATTTTGTCCCTAGAAAAGAAAAAAAAAAAAACATATTTATTATTTATTTTTCTAAACAGTAATTATCTTTTTCTTTCTTTTTTTTTCTTTTTCTAATCTGTCTTTCAGTTGTTTTAAGGGTTTTTCCAAAGTTAGAAACATAAAAGGGCTCTGAAATCAGCAACCAAAGAACTTTCCAACAACACACCCAGTAACCCATTTTTGTATTTTTTTTTACCTTCACCAAATCCTATGCATTTTGGACTCACTCTTCATTGATTCTACGCAAGCAGTGAAAAAGAAAATTAATTTTTTTGAGTGAGAGAGAAAGAAAGATGCAAACTTTGGAGTGAAAAGAGAAAACCCATTAACCCGGAAACCTTTTTATTTTGTTGCTAAGAAAAAAAAATGAAATTGAAGAACATTTCAGAGCTCATAAGTTTGTTTTTTCTTCTTATTCTTTTTCTTCTTCCCTTCAATATTGAAAGAATAATACCCACCTCCGCCATCGCTGCCGACGTAGATGCCGATTCCAATGTCCCCACCACTGCCACCGTCTTCCGCCCGAAAGACCACCACCACGACGGTCACGCTGCCGTGTTTGGCGCTCAGAAGAGAAGAGTCTACACTGGCCCAAATCCTCTTCATAACAGATAAGTAATTGAAGAAGCGGGGAAAAAAAAAAAAAGAAAAAGGAATTAAAATTTCTTCCTTCTTCATATATTCTTTTTTTATTTTACTTTTCTAGTAATATTTTTTTTGGGTTGAAAGTGAAATATTCTTCTTCTTCTTCTTCTTGCTCTTCTTGGTTGTACTCTCTGATGGAAAAGAGAATGATTATTGTTAATTATTTTATGTTGAAGTTATAATCCTCCCTATATATATATGTAAACGAGATTTTGTTTAGCAAAAAGTATATATAATAGTTTTCTGTTTGTAATTAAAAAGATTGAAATCAATGAATTATTTTGGTTTGGTTT

Coding sequence (CDS)

ATGAAATTGAAGAACATTTCAGAGCTCATAAGTTTGTTTTTTCTTCTTATTCTTTTTCTTCTTCCCTTCAATATTGAAAGAATAATACCCACCTCCGCCATCGCTGCCGACGTAGATGCCGATTCCAATGTCCCCACCACTGCCACCGTCTTCCGCCCGAAAGACCACCACCACGACGGTCACGCTGCCGTGTTTGGCGCTCAGAAGAGAAGAGTCTACACTGGCCCAAATCCTCTTCATAACAGATAA

Protein sequence

MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDGHAAVFGAQKRRVYTGPNPLHNR
Homology
[Close]
BLAST of Cmc08g0223061 vs. NCBI nr
Match: KAA0025884.1 (hypothetical protein E6C27_scaffold34G001680 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 2.0e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDG 60
          MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDG
Sbjct: 1  MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDG 60

Query: 61 HAAVFGAQKRRVYTGPNPLHNR 83
          HAAVFGAQKRRVYTGPNPLHNR
Sbjct: 61 HAAVFGAQKRRVYTGPNPLHNR 82

[Close]
BLAST of Cmc08g0223061 vs. NCBI nr
Match: KAG6595427.1 (hypothetical protein SDJN03_11980, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.7 bits (221), Expect = 1.2e-14
Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 0 

Query: 1  MKLKNISELISLFFLLI--LFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHH- 60
          M+LKNI+EL++LFFLL+  LFLLPF+ +  IPTS +AA   A         + RPK HH 
Sbjct: 1  MRLKNITELLTLFFLLLLFLFLLPFSFQTEIPTSTVAAAAAA-------TAIVRPKRHHS 60

Query: 61 ---HDGHAAVFGAQKRRVYTGPNPLHNR 83
             HDG AAVF AQKRRVYTGPNPLHNR
Sbjct: 61 PKSHDGGAAVFEAQKRRVYTGPNPLHNR 81

[Close]
BLAST of Cmc08g0223061 vs. ExPASy TrEMBL
Match: A0A5A7SJL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001680 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.5e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDG 60
          MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDG
Sbjct: 1  MKLKNISELISLFFLLILFLLPFNIERIIPTSAIAADVDADSNVPTTATVFRPKDHHHDG 60

Query: 61 HAAVFGAQKRRVYTGPNPLHNR 83
          HAAVFGAQKRRVYTGPNPLHNR
Sbjct: 61 HAAVFGAQKRRVYTGPNPLHNR 82

The following BLAST results are available for this feature:
BLAST of Cmc08g0223061 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025884.12.0e-36100.00hypothetical protein E6C27_scaffold34G001680 [Cucumis melo var. makuwa][more]
KAG6595427.11.2e-1460.23hypothetical protein SDJN03_11980, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cmc08g0223061 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0223061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SJL79.5e-37100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Cmc08g0223061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0223061.1Cmc08g0223061.1mRNA