Cmc08g0220021 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0220021
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBric-a-brac protein
LocationCMiso1.1chr08: 8151202 .. 8154309 (+)
RNA-Seq ExpressionCmc08g0220021
SyntenyCmc08g0220021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTTTCAAGAATATTTTTTTGTTGTTTTATTTTTATTTTTTTGACAAGGAAACCTTCTTAAGGAATAGCGATGTTTAGCGGCGAAGTGCAACTATTGAGGAAAGATGGGACTGTGGCTGAACCCTCTCCCTCGCGGTCAGCTAAGAACTAGCGCCTGCTTCTTCATCGTCGGAGTTTCCCTCTTCGCCGCCGGAGCTCACCTCTCTTACCTCAACATCGGCCCTCAGCAAGCTCGAACCAAAGCTCGTGATGATTTTGTCAGGGAGCGTTTGAGGAAGCGTCACGACGGTTAATGTGCATCTACTTGTTTCCGGTCAGCATTCAATCTCACCTCATTCTATCAGAGTTTCAATTTTTCTCTCAGGAGTCCATCATATTTGTGGATGATTACTGTAATTTACTAAATCGTTCTTGATTCTTTGGCAATTTGACGAGTTTGTAGAAAGGATTGGAAGTGTCTTAATCTTGATTTGTTTTCTTTCTTCTATACGAATCGGACGTTTTTTAGTGTCCGTCTTACCGTGCCATCTTTTTACTTCTCGTTTCCGAACACAGCGAATTCAATCAATTTCGTTGTCGGTGTAGTTCATCTCTGTTTCTCCGGTGCTCGACTTGGTCTTTGGGTTTAATCGTTGAACAAAACGATCTCAGTACTTGAGAGCCAATTACTGTATATGATCGACGATCAATTTGTAAGACCTCATTTCCGTAGGAATCCAATTTTGTACACCTAAGATCCTCTGATTTCCCCACTTCAAGAACGGGAGCATGAAACTATGGAGTGGCTTTGATCCCCTAGGTCACAATTTCTGACCTAGGGGAAGGGCTTCCTTGGTCTTGTTAAGGTTATTAAATTTACCTTTCTTCCCTTTCACTATATATCCTTTTGTTAGTTCCACATACATTTCTTCCAGTTTGCCATTCAAGGATGATAGCCTGACCATCAAGTTGAAATACATGTTGTCCCGATTGTTCTACTAAGATAAGAACAGTTTTTAGATGAGTCTCATGGTCTTCGTTTTCGTTTGTTTGTTAGAAATCGGAGTTTTCATTTTTTAACAAGAGACTAATCATTTCATTGAAAATATGAAAAGATACTAATACTCAAAGGATATAAACTAAACTCCTAAATGATAAATTAACAAACAACAGAGAAGCGATTCCGCAAACCATAACAAATGACATACTTACAAAGTTCACGGAAGATCTCATACATTAACATCAAGCAATGGTGTGAACATCGAGTTACCTATAGAAGTTGGAGTAGATGACCGCAAGCTCCAACAAGTGTTTTTGAAAAATCGCAACCTTCCATTTGAGGAACTTTGTATGACTAAGCTTCTCCTTTCAAATTCAATTCAATTCTTCGTCAAGATGTGCTATCTATGGCGACAAGGTAAAACTAAGTACTGAAGCAGACTCCATAAGAAATGTTGAAAATAAAATTCAGATAGAATCTTTAGAAATTTAGTTTGCATTGTGGGAAAGAAGGAATTACGAGGGCCATACTGAAAGCAAGCTCAACAAAAAAGAGAGCCCAAGAACTGATCACATAAAGCAACTCCAATTCAACAAGATCACACCAAAATCATAGTTACAATAAGGCCTAGTAATCAAGCTATACTCGAGTGCCTCCAAGGACGGGAAGGAAGTCGGTGTCCTAAACCTTTCATTGGTTTTTATCAAAACATTTGGTACGGCCTTGAGCACCCACTCAAAAGGGTTGTAGACCATACTTACTCATAAGAACTTGACACCACAAAGCATCGTACTCCATGGAAAATCACCTAGCCAAAGGCTGGTTTTGAAGCTTCCATGTTTTCTATGTTGGCAATTTCTTCCTCCTAAGTTTAAAATTGAACGTTTGCTACAACTTCAAGGTTCTGTGATTCGTAAGTGAACTTAGATACTGAGGTAATGTTTCAGTAACCTTTCTTTGCATGATTTTGAAATAAGGAATCATGCAAATAAAAGGAGGTTCAGAGGAGTATGAAAAAGAAAATTTGAACAACAACAAAGGTAGAAAGAGCTACCATCATTTGATTAATTAAAACAATCATTTGAAGTTTAGATATTACAAATAAGTAGACTAGTAGAGAATGGACCATCAAGAGCAAGGGCTTTTGCCATGGATTTATGTTAAGCCATTGTTTTAAAAGAAAGAATTTGTTTGGGATACTTGTTCTGCTTTACGGTTATTTGGCATACAACTTGATAGAAAGGTGGGTAGAGTTCATTAGTGATTAAGTGACTCTTCTGTATGTATAGATTAAACTGAACTACGTATATTTCTGAAGTAGGTTGTAACACTACACCCACACGAAACTTCAATGGGATGGGTGAAATATGCTTCTAGTTGAGATTTTTCTTTTCCTTTTTCCTTTTGATTTTTGTATTATAGTCTTCGTCGAGCCTTATATGTTGCACGACTTTTTGTTTTCTTTTACTTAATGAGTAATCACTAGCAAAGTATTTAGTTTGAGAAGATTATTTGACAGTCAGATGTTCATACTTTTATCTGTAAAACTTGTTTTGCTTAGTTTATAGAAAGTTTTAGGGTAGGTATTTATGATTTTAGTCTTTATATAGGTTAACAAAGAATATCTAACTTTGAAGAACAATAATACAAAAGTATGAAGTTTTAATATGGAACTGAGTTTCCCGAGTGCTAGGCGCCATAACATAACTCTATATGCGATCTTCAGGATGTATTTAGTTGACTCTGAGGCCTCTCGGAAAGAGGAGATGCAAAGCAACCATTGGAGAGACATCTTGGAACGGAGCCTTATATGCCTCAATTACCTCTTCATTTCTTTTTGTCACCTTTTAGGATTTTCTTTTAGGATCAAGAATACAATCGTATGTGAATTGAGTTGTTCTCGTGTATAGTTTTGCAAACTCTTTTGTATTACTTAACTTCAATTATTGAATATCTTTTCTTTTTGTTGAGATATTTAGTTTGTACCTAACTACCATTATTTGATCAGTTCAATAAGAAAACTAGCTTAAGCTAGCTCAATAGGCTTGGCCATAGTAAGCAATATTTGTACATTCAAAAGGCTCGATGTGATTATAGCTTGATGCATCGTTAACATTGATCTATAA

mRNA sequence

TTTCTTTTCAAGAATATTTTTTTGTTGTTTTATTTTTATTTTTTTGACAAGGAAACCTTCTTAAGGAATAGCGATGTTTAGCGGCGAAGTGCAACTATTGAGGAAAGATGGGACTGTGGCTGAACCCTCTCCCTCGCGGTCAGCTAAGAACTAGCGCCTGCTTCTTCATCGTCGGAGTTTCCCTCTTCGCCGCCGGAGCTCACCTCTCTTACCTCAACATCGGCCCTCAGCAAGCTCGAACCAAAGCTCGTGATGATTTTGTCAGGGAGCGTTTGAGGAAGCGTCACGACGGTTAATGTGCATCTACTTGTTTCCGGATGTATTTAGTTGACTCTGAGGCCTCTCGGAAAGAGGAGATGCAAAGCAACCATTGGAGAGACATCTTGGAACGGAGCCTTATATGCCTCAATTACCTCTTCATTTCTTTTTGTCACCTTTTAGGATTTTCTTTTAGGATCAAGAATACAATCGTATGTGAATTGAGTTGTTCTCGTGTATAGTTTTGCAAACTCTTTTGTATTACTTAACTTCAATTATTGAATATCTTTTCTTTTTGTTGAGATATTTAGTTTGTACCTAACTACCATTATTTGATCAGTTCAATAAGAAAACTAGCTTAAGCTAGCTCAATAGGCTTGGCCATAGTAAGCAATATTTGTACATTCAAAAGGCTCGATGTGATTATAGCTTGATGCATCGTTAACATTGATCTATAA

Coding sequence (CDS)

ATGGGACTGTGGCTGAACCCTCTCCCTCGCGGTCAGCTAAGAACTAGCGCCTGCTTCTTCATCGTCGGAGTTTCCCTCTTCGCCGCCGGAGCTCACCTCTCTTACCTCAACATCGGCCCTCAGCAAGCTCGAACCAAAGCTCGTGATGATTTTGTCAGGGAGCGTTTGAGGAAGCGTCACGACGGTTAA

Protein sequence

MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRHDG
Homology
[Close]
BLAST of Cmc08g0220021 vs. NCBI nr
Match: XP_016902886.1 (PREDICTED: uncharacterized protein LOC103500918 [Cucumis melo] >KAA0025233.1 hypothetical protein E6C27_scaffold541G00820 [Cucumis melo var. makuwa] >TYK07433.1 hypothetical protein E5676_scaffold202G001620 [Cucumis melo var. makuwa])

HSP 1 Score: 130.6 bits (327), Expect = 4.8e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH
Sbjct: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60

Query: 61 DG 63
          DG
Sbjct: 61 DG 62

[Close]
BLAST of Cmc08g0220021 vs. NCBI nr
Match: XP_011657716.1 (uncharacterized protein LOC105435887 [Cucumis sativus] >XP_011657717.1 uncharacterized protein LOC105435887 [Cucumis sativus] >XP_011657718.1 uncharacterized protein LOC105435887 [Cucumis sativus] >KGN48285.1 hypothetical protein Csa_004061 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWLNPLP GQLR SAC FIVG+SLFAAGAHLSYLNIGPQQARTKAR DFV+ERLR+R 
Sbjct: 1  MGLWLNPLPSGQLRNSACVFIVGLSLFAAGAHLSYLNIGPQQARTKARYDFVKERLRRRR 60

Query: 61 DG 63
          DG
Sbjct: 61 DG 62

[Close]
BLAST of Cmc08g0220021 vs. NCBI nr
Match: XP_038880929.1 (uncharacterized protein LOC120072605 [Benincasa hispida] >XP_038880930.1 uncharacterized protein LOC120072605 [Benincasa hispida])

HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWLNPLPRGQL TSACFF+ GVS FAAGA+LS+LNI PQQARTKARDDFV+ERLRKRH
Sbjct: 1  MGLWLNPLPRGQLATSACFFVAGVSFFAAGAYLSFLNIAPQQARTKARDDFVKERLRKRH 60

[Close]
BLAST of Cmc08g0220021 vs. NCBI nr
Match: XP_022132375.1 (uncharacterized protein LOC111005249 [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWL+PLPRGQL TSACFF+ GVS FA GA+ SYLNI PQQARTKARDDFV+ERLRKRH
Sbjct: 1  MGLWLDPLPRGQLATSACFFVAGVSFFAVGAYFSYLNIAPQQARTKARDDFVKERLRKRH 60

[Close]
BLAST of Cmc08g0220021 vs. NCBI nr
Match: XP_022962859.1 (uncharacterized protein LOC111463226 [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 4.3e-20
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MG WLNPLPRGQL TSAC+F+ G SLFA GA+LSY+NIGPQQARTKAR DFVRERLR+RH
Sbjct: 1  MGRWLNPLPRGQLGTSACYFVAGFSLFAVGAYLSYVNIGPQQARTKARSDFVRERLRRRH 60

[Close]
BLAST of Cmc08g0220021 vs. ExPASy TrEMBL
Match: A0A5D3C6A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001620 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH
Sbjct: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60

Query: 61 DG 63
          DG
Sbjct: 61 DG 62

[Close]
BLAST of Cmc08g0220021 vs. ExPASy TrEMBL
Match: A0A1S4E3S6 (uncharacterized protein LOC103500918 OS=Cucumis melo OX=3656 GN=LOC103500918 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH
Sbjct: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60

Query: 61 DG 63
          DG
Sbjct: 61 DG 62

[Close]
BLAST of Cmc08g0220021 vs. ExPASy TrEMBL
Match: A0A0A0KEZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454330 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWLNPLP GQLR SAC FIVG+SLFAAGAHLSYLNIGPQQARTKAR DFV+ERLR+R 
Sbjct: 1  MGLWLNPLPSGQLRNSACVFIVGLSLFAAGAHLSYLNIGPQQARTKARYDFVKERLRRRR 60

Query: 61 DG 63
          DG
Sbjct: 61 DG 62

[Close]
BLAST of Cmc08g0220021 vs. ExPASy TrEMBL
Match: A0A6J1BSA7 (uncharacterized protein LOC111005249 OS=Momordica charantia OX=3673 GN=LOC111005249 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MGLWL+PLPRGQL TSACFF+ GVS FA GA+ SYLNI PQQARTKARDDFV+ERLRKRH
Sbjct: 1  MGLWLDPLPRGQLATSACFFVAGVSFFAVGAYFSYLNIAPQQARTKARDDFVKERLRKRH 60

[Close]
BLAST of Cmc08g0220021 vs. ExPASy TrEMBL
Match: A0A6J1HI96 (uncharacterized protein LOC111463226 OS=Cucurbita moschata OX=3662 GN=LOC111463226 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0 

Query: 1  MGLWLNPLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRKRH 60
          MG WLNPLPRGQL TSAC+F+ G SLFA GA+LSY+NIGPQQARTKAR DFVRERLR+RH
Sbjct: 1  MGRWLNPLPRGQLGTSACYFVAGFSLFAVGAYLSYVNIGPQQARTKARSDFVRERLRRRH 60

[Close]
BLAST of Cmc08g0220021 vs. TAIR 10
Match: AT3G11591.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-11
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 7  PLPRGQLRTSACFFIVGVSLFAAGAHLSYLNIGPQQARTKARDDFVRERLRK 59
          P  R QL  S  FF  GVSLF AGA+LS  NI PQQAR KAR+DFV++R+RK
Sbjct: 8  PPTRRQLVVSVGFFAAGVSLFVAGAYLSLANISPQQARVKARNDFVKDRIRK 59

The following BLAST results are available for this feature:
BLAST of Cmc08g0220021 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902886.14.8e-27100.00PREDICTED: uncharacterized protein LOC103500918 [Cucumis melo] >KAA0025233.1 hyp... [more]
XP_011657716.16.0e-2287.10uncharacterized protein LOC105435887 [Cucumis sativus] >XP_011657717.1 uncharact... [more]
XP_038880929.11.0e-2186.67uncharacterized protein LOC120072605 [Benincasa hispida] >XP_038880930.1 unchara... [more]
XP_022132375.11.1e-2083.33uncharacterized protein LOC111005249 [Momordica charantia][more]
XP_022962859.14.3e-2081.67uncharacterized protein LOC111463226 [Cucurbita moschata][more]
BLAST of Cmc08g0220021 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0220021 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C6A02.3e-27100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4E3S62.3e-27100.00uncharacterized protein LOC103500918 OS=Cucumis melo OX=3656 GN=LOC103500918 PE=... [more]
A0A0A0KEZ92.9e-2287.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454330 PE=4 SV=1[more]
A0A6J1BSA75.5e-2183.33uncharacterized protein LOC111005249 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1HI962.1e-2081.67uncharacterized protein LOC111463226 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
BLAST of Cmc08g0220021 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G11591.11.8e-1163.46unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0220021.1Cmc08g0220021.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane