Cmc08g0216201 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0216201
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionU1 small nuclear ribonucleoprotein 70 kDa
LocationCMiso1.1chr08: 5509157 .. 5514358 (+)
RNA-Seq ExpressionCmc08g0216201
SyntenyCmc08g0216201
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGGCCCAAGGAGAATCCGGGCTTGCAGAATAATCTGTGTATAAATAGCGTCAATAAATCGTAAAACCTTTTCCGCCTTTTCGCTGCCGCCTCTTCCACTTCCCTCCGTTTCCACCCGACTGTACGAAATAGATCCAGCCAAGAACGCTCACCAATGTTCTTTCTCCCTTCCATTTGATTTCTTGCATCAATTCTTTGTAATCGTATTAGTCTGAGAGACGATCCTGCGCTACCATGGGGGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCCGTTCAGGCTCGTACTAAGGCCCAGAATCGTGCCAATGTCCTTCAACTCAAGCTGGTTGGTGGATTGCTTTTGATTATTGTTATCTTTTCTGTAGAAGCCTTCAATTGTTTTTGTTTAGTTTTATTGAACTTAGCTAGGGTTTCAAGAGGTCGTTCGCATTCGTTAATTAGAAGAGATGCAGATTTTTTTTTTTTGGTGTCGCCAAGTTTTGGTTCTTGTGGATTCCTAATGTTTTATTTTCGTTTTTTGCTTAGAAATGATAAATTTGGTTATCTCCGTTGAATGACTCATAGATCGTTAACAACTTCTTGTCAATGAAATGTCTCGTTTCTTGCTTGAGGAAAAAAATAATATAGTCAAAGATGATGCTGTGATGCGTCGACTTTATACTGTCGTTGGGGGTTGAAATTTTAGATTATGGTTCTCAAAGAAGTTCGATGGGTTTGTAGAATGTTCGATTATTGGATATATCGGGTTCTTAATTTTCCTTCTCGTACAGATTGGGCAGAGTCATCCTACTGGTCTAACGGCCAATCTCTTGAAGCTCTTTGAGCCCCGACCGCCTCTGGAGTTCAAACCTCCACCAGAGAAAAGAAAATGTCCACCATTAACAGGTTTTTAGTACTTTCTAAAACTTGTATGCGGTTTATTGACTTTTGTGGAGTTTCCTTTCCTTCATTGTTTCCTCTGAGGGGTGAAATTTTATCTTGTTTGTCTTGAAGGGATGGCCCAGTTTGTGAGTAATTTTGCAGAACCTGATGATCCAGAATATGCTCCCCCTGTTCAAAAGGGTGAAACTCCAGTAAGATAATTTACTTCTTGATGATTGTCTGAACCACATTCCCCAATCCTTCTAAAATTGAATTTCGAATCATTAATGCCCTTCTCCCCTGAATATACATGTTTTGGGCATATATGTGTACTATAAGGAAAGTGAGTATTACGTATTTGAAGAATTTAAATTATCTCCTGAAAATAATATTTTCTAGCTTGTGGTGAAAAATGGTTTATTTTAAACACAGTTAGAGGGAATTAAATTGAGTAGCTTGTAAATTTGAAGGGCAGTGTGTAACTAATTTTCTCATGATTGTTGAAGTATTAAACAAGTAGGTTACAAAATACAAGAAGCAAAATTTGAAAATAAGTAACCACTCGAGGTTCTGACTAGTCTGAAATCTTTACCTTTCAGGCGGAAAGGAGGGCTAGAATTCACTTGCTAAGAATTGAAAAGGGTGCAGAGAAAGCTGCTGAGGAGCTGCCAAAATGTAAATACATCTTTTTGGTTGTTACCTTGAATTTGTAGGTAAAAGTTTTTTTGATGTCTTCTGTCTTACACATGTACTTTTTTGCAGATCTTGAGCGTGATGATCCAAATGTTACTGGAGATCCATACAAAACACTCTTTGTGGCCAGACTGGTGTGTAAAATGTTCTATGCATAGTTCTTTAATCTAAATTTAAATTTTCACTGAAAATCGTTGTTACTCATTGGCAGAATTATGAGACAACTGAGAGCCGAATCAAAAGAGAGTTTGAATCTTATGGGCCAATCAAGCGGGTAGGTATTTGAGCATCCTCATGGGGCTCGGTAAGAGGTTAATATATATGTGGCCAAATAAATATTTTATGTATACTATCAGCAATGTTTATTGGGTAGTTATCATGTTTTTGGTCCATTTTCCTTTAAAATTATTTTCTAGAATCTACACCATATTACCATTCTAAACCACCATGAATTGGTCTAGTGGCATACCTAAGCATGGATTTTCTTGGATCGGTTGTCTCAGATAATAGATATTCTTGTAATGTTTTGTGTTGTACTGACGATAAAATGGTTCATGCTGTCTCTTTAACTTTGCCCATCAGAAAAATTCCACTGGCCTATCATACTACGTAAGGACATGCCAAACAGGTCTCTTATTTTTTTTTATCCCTTTAAACTCTCCCCATTTAAAGTAGTCAAATTTCTGGGTAAGTTTTTATGGAAGTAGAACATATTTTTACCTGACTGGGTGTCCTTATGGTGCAACCAAGTTTGAAGAAAGATTAACGCCAAACACCTCCCTGGATTCATTGATAATTCAAGCTCCTAATAGTCTCTCAGGTAAACCTGCTGGTATGCAGTCATGACTTTCATGTGTATTTCATTTTCCTCTTAGTGCCCGTTTCTTTGCCCAGATGTAGTTGGCTAGAGAATTCTTGAGGCATGATGTTAGTAGGAAACTCCTTAGTAAAATTCGATACATCAAGAATTCCTGGTAAGGAGGCAGTTATTCTACATTCAGCCAAGTATTATTCATGATATCAGTATTTCTATGGCTCTGATCCCAAACACGGTGTGGTTCACCATGCGTTGAAAGCTGGAAGTTTTAGGTTGGGCAGTTGATTGATGTGCTTTGCCTTATGGCCTTTGTATGGAAGCAAGAAAGGAGATTGTCAACTTCCCTATTTTTCAGCTTTGGGTAAAACACATAGGGAGTATTAGCATCTCTTTCTCCTTTGAATTTTGTACTACATAGATTTTCTGCTGCTAAAAGTTTTACTTTTGGCTTTAAAGGCATCGAAAAATTTCGCCGTTGAGAAGATTTCCTGGTATTTCCTGTATTACATAAACTTCTTTCATTATTTGAAAAATAATTTCCCTGGTAAGGGGAGTTTAGTATGTTCTACAACTGGTAAAATGGCCACAAATACTTCAGTTTTTCCGACTCGGTGGTGATGCATCTCGCGATGGGAGCTCTATGATTTAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGTCTGCCGTGCCAATAGGATTAGCTTATAATAAACTTTATTTCAGTACTTATCTAGCTATAAACTAAGAAATGTTCAAGGAGAATCAAGAATGTACGATGGGAAGAGATATTTAACTTCTCTTCTGCCATATGACTTCTTGTTTGTAATTTTCTTTGTTTTGCAGGTCCGATTGATTACAGACAAAGTGACAGGTAAACCTAAAGGCTATGCTTTCATCGAGTACATGCACAAAAGAGATATGAAAGGTTTGTTTCAATTAATTAGTATGTTGACCACTTTTCTGTTGGTTAAATTTCTCCTTTTGAAACTAATTAATCCACTCACATCCATTGGAAACTACTCAGCTGCATATAAGCAAGCCGATGGCAGGAAGATTGATGGTAGAAGGGTACTTGTGGATGTCGAGCGAGGTAGAACAGTACCAAATTGGCGTCCCCGCCGTCTGGGTGGAGGTCTTGGAACTACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATTCTGGAAGGTAGTTAATATGATGTCAACTCCTGCAATTTCAAGTGCAAGCCATTGAGAAATGTTGATAACTGTAGTAAGAAACAAAGCTGAATGCATGATTGTGATTCTCATTCTGGTGTTGTGTCTTGGGCAGTCTTAAATCTTTTATGATTGCTGCAATTTTTTTATAATAGATGATATAATTTAATATATTCTTAGGCTGAAAGCATCTTGTGATTTGTCCAGGGAACAACAGCAGTCTGGTGCACCATCCAGATCAGAGGAGCCTAGGGCTCGAGAAGATCGTCATGGAGAGCGGTATGATGTTCTATATATTTTTCTTTTCATTTAGGATAGAATTTTGGGTCGATAGCATGCTTCTATCAATTAATAGTTTCAGGATGTGAATGTGAATTCGATTTTTTATTAATTTTGAGATGTGTTAGTGGGCTTCTCTTTAATGTTCTCAGAGATAGGGAAAAGTCCTATGACAAGGGAAGAGACCGAGAAAGAGATAGAGAGAAGTCTCGTGAACATTCCCATGAGAGATCTAAGGAGCGTGATGTCAGAGAGGACAGGCATCACAGAGACCGTGATAGGACTAGAGATAGAGATAGGGATAGGGATAGAGAGAGAGATCGTGGCTATGACCGCGATAGAACACGTGATCGAGGAAGGGATCGAGGTCGTGACTATGAGCGTGACAGAGATCGGGATCGTCATCGGGATAGAGATAGGGAGAGGGATCGGGATCATGAAGGGGGATATCCAGACCCTGATCGCGGTCGCTCTCACGATAGGGACGACTATGATCGTGTCGAGTCAAAATATGAGAAGGATAGACATGGTGATAGGGATAGAGATAGGGATATGGATCGTGCAGAAACCGAGGATGGTCGTGGGTGGTATGATCAGCCTGAGCATGGGCACAGAGATGCTGATCATGATCCCCAGTACTACGACCACTTTGAACATAACCGAGGTCGAGGGCAATATGATCAACCAGAAGGCCACCGTGACCAAGATCGTTATGATCAGTATGATGACAGAATGGACGATGATTATCATTATGAGCGTGGGAATTCTGAATCACATGATAGAGAGAGGTCTCGTGATTTGAATCACGAATATAAGCGCAGTGAGAGATCTCATTCGAGAGAGTACTAATCGCAATGTGTTCAGCTGGTAAGTATCTCTGCTTTTCCTTTTCCAATTCATGACAAGACAGCCATTTCCTCATATGCATATTCCTCCTCCTAAATGTTGTTTTCCAGGTTGAGATAACATCAAAGTCCATGAAAATATATCTATCATGGTAGCCGCCGCGTCCCTGTGTTGGAATTGTCTTCTTTGTTATGTTAATTGACATATAAAGCTCAAACAAACACCGTTGATATGTTGTCTGATGCGCTGTATGTTCTTGGAAGTTTCAGTTTCAATTTCAGCCACTTTATGCAGATTTTTGCACAGTTTATTTATGTGCTACAAACTCCTAAACTTACCCTTGTGTACTACTTTGTGACCATTATTTTTAAAGCTCCTAGATTGGTTATTAACATTTTGTATGCTTGATTGTGAAACATCGTTTTGATTCGAACAAAGTGTGAAGACACTAATTAGATTTCTAACTAACATTAAATAAAAATGAAAATCAATGGTGG

mRNA sequence

TTTGGCCCAAGGAGAATCCGGGCTTGCAGAATAATCTGTGTATAAATAGCGTCAATAAATCGTAAAACCTTTTCCGCCTTTTCGCTGCCGCCTCTTCCACTTCCCTCCGTTTCCACCCGACTGTACGAAATAGATCCAGCCAAGAACGCTCACCAATGTTCTTTCTCCCTTCCATTTGATTTCTTGCATCAATTCTTTGTAATCGTATTAGTCTGAGAGACGATCCTGCGCTACCATGGGGGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCCGTTCAGGCTCGTACTAAGGCCCAGAATCGTGCCAATGTCCTTCAACTCAAGCTGATTGGGCAGAGTCATCCTACTGGTCTAACGGCCAATCTCTTGAAGCTCTTTGAGCCCCGACCGCCTCTGGAGTTCAAACCTCCACCAGAGAAAAGAAAATGTCCACCATTAACAGGGATGGCCCAGTTTGTGAGTAATTTTGCAGAACCTGATGATCCAGAATATGCTCCCCCTGTTCAAAAGGGTGAAACTCCAGCGGAAAGGAGGGCTAGAATTCACTTGCTAAGAATTGAAAAGGGTGCAGAGAAAGCTGCTGAGGAGCTGCCAAAATATCTTGAGCGTGATGATCCAAATGTTACTGGAGATCCATACAAAACACTCTTTGTGGCCAGACTGAATTATGAGACAACTGAGAGCCGAATCAAAAGAGAGTTTGAATCTTATGGGCCAATCAAGCGGGTCCGATTGATTACAGACAAAGTGACAGGTAAACCTAAAGGCTATGCTTTCATCGAGTACATGCACAAAAGAGATATGAAAGCTGCATATAAGCAAGCCGATGGCAGGAAGATTGATGGTAGAAGGGTACTTGTGGATGTCGAGCGAGGTAGAACAGTACCAAATTGGCGTCCCCGCCGTCTGGGTGGAGGTCTTGGAACTACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATTCTGGAAGGGAACAACAGCAGTCTGGTGCACCATCCAGATCAGAGGAGCCTAGGGCTCGAGAAGATCGTCATGGAGAGCGAGATAGGGAAAAGTCCTATGACAAGGGAAGAGACCGAGAAAGAGATAGAGAGAAGTCTCGTGAACATTCCCATGAGAGATCTAAGGAGCGTGATGTCAGAGAGGACAGGCATCACAGAGACCGTGATAGGACTAGAGATAGAGATAGGGATAGGGATAGAGAGAGAGATCGTGGCTATGACCGCGATAGAACACGTGATCGAGGAAGGGATCGAGGTCGTGACTATGAGCGTGACAGAGATCGGGATCGTCATCGGGATAGAGATAGGGAGAGGGATCGGGATCATGAAGGGGGATATCCAGACCCTGATCGCGGTCGCTCTCACGATAGGGACGACTATGATCGTGTCGAGTCAAAATATGAGAAGGATAGACATGGTGATAGGGATAGAGATAGGGATATGGATCGTGCAGAAACCGAGGATGGTCGTGGGTGGTATGATCAGCCTGAGCATGGGCACAGAGATGCTGATCATGATCCCCAGTACTACGACCACTTTGAACATAACCGAGGTCGAGGGCAATATGATCAACCAGAAGGCCACCGTGACCAAGATCGTTATGATCAGTATGATGACAGAATGGACGATGATTATCATTATGAGCGTGGGAATTCTGAATCACATGATAGAGAGAGGTCTCGTGATTTGAATCACGAATATAAGCGCAGTGAGAGATCTCATTCGAGAGAGTACTAATCGCAATGTGTTCAGCTGGTTGAGATAACATCAAAGTCCATGAAAATATATCTATCATGGTAGCCGCCGCGTCCCTGTGTTGGAATTGTCTTCTTTGTTATGTTAATTGACATATAAAGCTCAAACAAACACCGTTGATATGTTGTCTGATGCGCTGTATGTTCTTGGAAGTTTCAGTTTCAATTTCAGCCACTTTATGCAGATTTTTGCACAGTTTATTTATGTGCTACAAACTCCTAAACTTACCCTTGTGTACTACTTTGTGACCATTATTTTTAAAGCTCCTAGATTGGTTATTAACATTTTGTATGCTTGATTGTGAAACATCGTTTTGATTCGAACAAAGTGTGAAGACACTAATTAGATTTCTAACTAACATTAAATAAAAATGAAAATCAATGGTGG

Coding sequence (CDS)

ATGGGGGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCCGTTCAGGCTCGTACTAAGGCCCAGAATCGTGCCAATGTCCTTCAACTCAAGCTGATTGGGCAGAGTCATCCTACTGGTCTAACGGCCAATCTCTTGAAGCTCTTTGAGCCCCGACCGCCTCTGGAGTTCAAACCTCCACCAGAGAAAAGAAAATGTCCACCATTAACAGGGATGGCCCAGTTTGTGAGTAATTTTGCAGAACCTGATGATCCAGAATATGCTCCCCCTGTTCAAAAGGGTGAAACTCCAGCGGAAAGGAGGGCTAGAATTCACTTGCTAAGAATTGAAAAGGGTGCAGAGAAAGCTGCTGAGGAGCTGCCAAAATATCTTGAGCGTGATGATCCAAATGTTACTGGAGATCCATACAAAACACTCTTTGTGGCCAGACTGAATTATGAGACAACTGAGAGCCGAATCAAAAGAGAGTTTGAATCTTATGGGCCAATCAAGCGGGTCCGATTGATTACAGACAAAGTGACAGGTAAACCTAAAGGCTATGCTTTCATCGAGTACATGCACAAAAGAGATATGAAAGCTGCATATAAGCAAGCCGATGGCAGGAAGATTGATGGTAGAAGGGTACTTGTGGATGTCGAGCGAGGTAGAACAGTACCAAATTGGCGTCCCCGCCGTCTGGGTGGAGGTCTTGGAACTACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATTCTGGAAGGGAACAACAGCAGTCTGGTGCACCATCCAGATCAGAGGAGCCTAGGGCTCGAGAAGATCGTCATGGAGAGCGAGATAGGGAAAAGTCCTATGACAAGGGAAGAGACCGAGAAAGAGATAGAGAGAAGTCTCGTGAACATTCCCATGAGAGATCTAAGGAGCGTGATGTCAGAGAGGACAGGCATCACAGAGACCGTGATAGGACTAGAGATAGAGATAGGGATAGGGATAGAGAGAGAGATCGTGGCTATGACCGCGATAGAACACGTGATCGAGGAAGGGATCGAGGTCGTGACTATGAGCGTGACAGAGATCGGGATCGTCATCGGGATAGAGATAGGGAGAGGGATCGGGATCATGAAGGGGGATATCCAGACCCTGATCGCGGTCGCTCTCACGATAGGGACGACTATGATCGTGTCGAGTCAAAATATGAGAAGGATAGACATGGTGATAGGGATAGAGATAGGGATATGGATCGTGCAGAAACCGAGGATGGTCGTGGGTGGTATGATCAGCCTGAGCATGGGCACAGAGATGCTGATCATGATCCCCAGTACTACGACCACTTTGAACATAACCGAGGTCGAGGGCAATATGATCAACCAGAAGGCCACCGTGACCAAGATCGTTATGATCAGTATGATGACAGAATGGACGATGATTATCATTATGAGCGTGGGAATTCTGAATCACATGATAGAGAGAGGTCTCGTGATTTGAATCACGAATATAAGCGCAGTGAGAGATCTCATTCGAGAGAGTACTAA

Protein sequence

MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERSHSREY
Homology
[Close]
BLAST of Cmc08g0216201 vs. NCBI nr
Match: XP_008440701.1 (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Cucumis melo])

HSP 1 Score: 943.3 bits (2437), Expect = 8.3e-271
Identity = 502/505 (99.41%), Postives = 503/505 (99.60%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRER+REKSREHSHERSK
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRDRDRE--RDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD 360
           ERDVREDRHHRDRDRTRDRDRDRDRE  RDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD
Sbjct: 301 ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD 360

Query: 361 RDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWY 420
           RDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWY
Sbjct: 361 RDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWY 420

Query: 421 DQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSE 480
           DQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSE
Sbjct: 421 DQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSE 480

Query: 481 SHDRERSRDLNHEYKRSERSHSREY 504
           SHDRERSRDLNHEYKRSERSHSREY
Sbjct: 481 SHDRERSRDLNHEYKRSERSHSREY 505

[Close]
BLAST of Cmc08g0216201 vs. NCBI nr
Match: XP_004143506.1 (U1 small nuclear ribonucleoprotein 70 kDa [Cucumis sativus] >KGN48823.1 hypothetical protein Csa_003241 [Cucumis sativus])

HSP 1 Score: 928.7 bits (2399), Expect = 2.1e-266
Identity = 496/507 (97.83%), Postives = 499/507 (98.42%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETP ERRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRHSGREQQQSGAPSRSEEPR REDRHGERDREKSYDKGRDRERDREKSREHSHERSK
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRVREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRDRD----RERDRGYDRDRTRDRGRDRGRDYERDRDRDRH 360
           ERDVREDRHHRDRDRTRDRDRDRD    R+RDRGYDRDRTRDRGRDRGRDYERDRDRDRH
Sbjct: 301 ERDVREDRHHRDRDRTRDRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRH 360

Query: 361 RDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRG 420
           RDRDRER+RDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG  DRDRD+DRAETEDGRG
Sbjct: 361 RDRDRERERDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG--DRDRDVDRAETEDGRG 420

Query: 421 WYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGN 480
           WYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGN
Sbjct: 421 WYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGN 480

Query: 481 SESHDRERSRDLNHEYKRSERSHSREY 504
           SESHDRERSRDLNHEYKRSERSHSREY
Sbjct: 481 SESHDRERSRDLNHEYKRSERSHSREY 505

[Close]
BLAST of Cmc08g0216201 vs. NCBI nr
Match: XP_038881482.1 (U1 small nuclear ribonucleoprotein 70 kDa [Benincasa hispida])

HSP 1 Score: 893.6 bits (2308), Expect = 7.6e-256
Identity = 484/509 (95.09%), Postives = 492/509 (96.66%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSSFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRHSGREQQQ+GAPSRSEEPRAREDRH ERDREKSYDKGRDRERDREKSRE SHERSK
Sbjct: 241 NSQRHSGREQQQAGAPSRSEEPRAREDRHAERDREKSYDKGRDRERDREKSRERSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRDRDRERDRGYDRDRTRDRGRDRGRDY--ERDRDRDRHRD 360
           +RDVREDRHHRDRDRTRDRDRDRDRERDRGYDRDRTRDRGRDRGRD+  +RDRDRDRHRD
Sbjct: 301 DRDVREDRHHRDRDRTRDRDRDRDRERDRGYDRDRTRDRGRDRGRDHDRDRDRDRDRHRD 360

Query: 361 RDRE--RDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRG 420
           RDRE  RDRDHEGGYPDPDRGRSHDRDDYDR+ESKYEKDRHG  DRDRD+D AETEDGRG
Sbjct: 361 RDRERDRDRDHEGGYPDPDRGRSHDRDDYDRIESKYEKDRHG--DRDRDIDHAETEDGRG 420

Query: 421 WYDQPEHGHR--DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYER 480
           WYDQPEHGHR  D DHDPQYYDHFEHNR RGQYD  EGHRDQDRYDQYDDRM+DDY YER
Sbjct: 421 WYDQPEHGHRHPDTDHDPQYYDHFEHNRSRGQYDHSEGHRDQDRYDQYDDRMEDDYPYER 480

Query: 481 GNSESHDRERSRDLNHEYKRSERSHSREY 504
           G SESHDRERSRDLNHEYKRSERSHSREY
Sbjct: 481 GTSESHDRERSRDLNHEYKRSERSHSREY 507

[Close]
BLAST of Cmc08g0216201 vs. NCBI nr
Match: XP_022132461.1 (U1 small nuclear ribonucleoprotein 70 kDa [Momordica charantia])

HSP 1 Score: 859.8 bits (2220), Expect = 1.2e-245
Identity = 472/513 (92.01%), Postives = 491/513 (95.71%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPA+RRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAQRRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           N+QRHSGREQQQSGAPSRSEEPR REDRHGERDREKS++KGRDRER+REKSRE SHERSK
Sbjct: 241 NNQRHSGREQQQSGAPSRSEEPRGREDRHGERDREKSHEKGRDREREREKSRERSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRD--RDRERDRGYDRDRT--RDRGRDRGRDYE--RDRDRD 360
           +RD+REDRHHRDRDRTRDRDRD  R+RERDRGYDRD+T  RDRGRDRGRDYE  RDRDRD
Sbjct: 301 DRDLREDRHHRDRDRTRDRDRDRERERERDRGYDRDKTRDRDRGRDRGRDYERDRDRDRD 360

Query: 361 RHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAETED 420
           RHRDRDRERDR+HE GYP+PDRGRSHDR+ DYDRVESKYEKDRHG  DRDR++DR ETED
Sbjct: 361 RHRDRDRERDRNHEDGYPEPDRGRSHDRESDYDRVESKYEKDRHG--DRDREIDRTETED 420

Query: 421 GRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQY-DQPEGHRDQDRYDQYDDRMDDDY 480
           GRGWYDQ EHGHR  D DHDPQYYDHFEHNRGRGQY D PEGH DQDRYDQY DRM+DDY
Sbjct: 421 GRGWYDQSEHGHRHPDPDHDPQYYDHFEHNRGRGQYDDNPEGHHDQDRYDQY-DRMEDDY 480

Query: 481 HYERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           HYERG SESHD+ERSRD+NHEY+RSERSHSREY
Sbjct: 481 HYERGTSESHDKERSRDMNHEYRRSERSHSREY 510

[Close]
BLAST of Cmc08g0216201 vs. NCBI nr
Match: XP_023517571.1 (U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo] >XP_023517572.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 831.6 bits (2147), Expect = 3.5e-237
Identity = 459/515 (89.13%), Postives = 484/515 (93.98%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++RRARIHLLRIEKGA+KAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDRER+REKSRE SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRD----RDRERDRGYDRDRT--RDRGRDRGRDYE--RDRD 360
           +RD+REDRHHRDRDRTRDRDRD    R+RERDRG+DRDRT  RDRGRDRGRDYE  RDRD
Sbjct: 301 DRDLREDRHHRDRDRTRDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRD 360

Query: 361 RDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAET 420
           RDRHRDRDRER+RDHEGGY DPDRGRSHDR+ DYDRV+SKYEKDRHG  DR++D+D  ET
Sbjct: 361 RDRHRDRDRERERDHEGGYADPDRGRSHDRESDYDRVDSKYEKDRHG--DREKDIDPGET 420

Query: 421 EDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDD 480
           EDG GWYDQP HGHR   D DHDPQYYDHFEHNR R QYD PE H  QDRYDQY DRM+D
Sbjct: 421 EDGHGWYDQPAHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQY-DRMED 480

Query: 481 DYHYERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           DY YERG SE+ DRERSRDLNHEY+R+ERSHSREY
Sbjct: 481 DYRYERGTSETRDRERSRDLNHEYRRTERSHSREY 511

[Close]
BLAST of Cmc08g0216201 vs. ExPASy Swiss-Prot
Match: Q42404 (U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU1 PE=1 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.2e-125
Identity = 305/511 (59.69%), Postives = 348/511 (68.10%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1   MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPP TGMAQFVSNFAEP DPEYAPP  + E P+++R RIH LR+EKG EKAAE+
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           L KY   +DPN TGDPYKTLFV+RLNYE++ES+IKREFESYGPIKRV L+TD++T KPKG
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMH RDMKAAYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGG E
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYDKGRDRERDREKSREHSHERS 300
                   EQQ  G  S+SEEP R RE      +REKS +KG++RER RE S E   ERS
Sbjct: 241 EIV----GEQQPQGRTSQSEEPSRPRE------EREKSREKGKERERSRELSHEQPRERS 300

Query: 301 KERDVREDRHHRDRD---RTRDRD--RDRDRERDRGYDRDRTRDRGRDRGRDYERDRDRD 360
           ++R  RED+HHRDRD   R RDRD  RDRDR RDRG DRDR   R RDRGRD      RD
Sbjct: 301 RDRP-REDKHHRDRDQGGRDRDRDSRRDRDRTRDRG-DRDR---RDRDRGRD---RTSRD 360

Query: 361 RHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMD-RAETED 420
             RDR R+++RD+EGG                    +YE +  G R R+RD + R E E+
Sbjct: 361 HDRDRSRKKERDYEGG--------------------EYEHE-GGGRSRERDAEYRGEPEE 420

Query: 421 GRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYD-QYDDRMDDDYHY 480
            RG+Y+                               +   D DRY  +YD   +DD+ Y
Sbjct: 421 TRGYYE-------------------------------DDQGDTDRYSHRYDKMEEDDFRY 425

Query: 481 ERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           ER                EYKRS+RS SREY
Sbjct: 481 ER----------------EYKRSKRSESREY 425

[Close]
BLAST of Cmc08g0216201 vs. ExPASy Swiss-Prot
Match: Q66II8 (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp70 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.6e-60
Identity = 202/469 (43.07%), Postives = 270/469 (57.57%), Query Frame = 0 

Query: 42  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGE 101
           L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + E
Sbjct: 5   LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPAERRARIHLLRIEKGAEKAAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
           T  ER  R    +IE+  +    EL  +   +D N  GD +KTLFVAR+NY+TTES+++R
Sbjct: 65  TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 124

Query: 162 EFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERG 221
           EFE YGPIKR+ ++ +K +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184

Query: 222 RTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERD-RE 281
           RTV  WRPRRLGGGLG TR GG + + RHSGR+       SR +E     DR  ERD RE
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD-----TSRYDE--RDRDRERERDRRE 244

Query: 282 KSYDKGRDRERDREKSRE-HSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRGYDRD 341
           +S ++ ++RER R +SRE     RS+E++ R+    R RD+ +D+D+D+D+E+D+  DRD
Sbjct: 245 RSRERDKERERRRSRSRERRRRSRSREKEERKRSRERSRDKDKDKDKDKDKEKDKDKDRD 304

Query: 342 RTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYE- 401
           R R   R R R+ +R+RDRDR +  DR      E      D  ++ D    D +E K E 
Sbjct: 305 RKR---RSRSRERKRERDRDREKKEDRVEGEVPESVDVPQDDAQTGDL-GIDGIELKQEP 364

Query: 402 KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGH 461
           ++++ DRDR+RD ++   +D            RD D D          R R   D+    
Sbjct: 365 EEKNRDRDRERDREKDRDKD------------RDRDRD----------RRRSHRDR---E 424

Query: 462 RDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERSHSRE 503
           RD+DR    D R D D           DR+R RD   E  R +R   RE
Sbjct: 425 RDKDRERDRDRRRDRD----------RDRDRDRDHKRERDRGDRGEKRE 424

[Close]
BLAST of Cmc08g0216201 vs. ExPASy Swiss-Prot
Match: P08621 (U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=1 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 2.1e-59
Identity = 187/406 (46.06%), Postives = 232/406 (57.14%), Query Frame = 0 

Query: 42  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGE 101
           L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + E
Sbjct: 5   LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPAERRARIHLLRIEKGAEKAAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
           T  ER  R    +IE+  ++   EL  +   +DPN  GD +KTLFVAR+NY+TTES+++R
Sbjct: 65  TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 124

Query: 162 EFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERG 221
           EFE YGPIKR+ ++  K +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184

Query: 222 RTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREK 281
           RTV  WRPRRLGGGLG TR GG + + RHSGR+          E P      H +RD   
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD----TSRYDERPGPSPLPHRDRD--- 244

Query: 282 SYDKGRDRERDREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRGYDRDRT 341
                RDRER+R   RE S ER KE   RE R  R RDR R R R RD+E +R   R+R+
Sbjct: 245 -----RDRERER---RERSRERDKE---RERRRSRSRDRRR-RSRSRDKE-ERRRSRERS 304

Query: 342 RDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPD-----------PDRG-------- 401
           +D+ RDR R   R R+R R   R+RER  +  GG  D           PD G        
Sbjct: 305 KDKDRDRKRRSSRSRERAR---RERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPD 364

Query: 402 -------RSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRG 417
                  +  DRD   R   + E++R  DRDRDRD DR      RG
Sbjct: 365 GPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERG 384

[Close]
BLAST of Cmc08g0216201 vs. ExPASy Swiss-Prot
Match: P09406 (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis OX=8355 GN=snrnp70 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.6e-57
Identity = 201/477 (42.14%), Postives = 265/477 (55.56%), Query Frame = 0 

Query: 42  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGE 101
           L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + E
Sbjct: 5   LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPAERRARIHLLRIEKGAEKAAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
           T  ER  R    +IE+  +    EL  +   +D N  GD +KTLFVAR+NY+TTES+++R
Sbjct: 65  TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 124

Query: 162 EFESYGPIKRVRLITDK---VTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDV 221
           EFE YGPIKR+ ++ +K    +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDV
Sbjct: 125 EFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 184

Query: 222 ERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERD 281
           ERGRTV  WRPRRLGGGLG TR GG + + RHSGR+                  R+ ERD
Sbjct: 185 ERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD---------------TSRYDERD 244

Query: 282 REKSYDKGRDRERDREKS-REHSHERSKERDVR-EDRHHRDRDRTRDRDRDRDRERDR-G 341
           RE+  D+ R+R R+REK  RE    RS+ER  +   R   +R RTR++ +D+D+E+D+  
Sbjct: 245 RERERDR-RERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDN 304

Query: 342 YDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD----DYD 401
            DRDR R   R R R+ +R+RDRDR +  +R      E   P+ D     D        D
Sbjct: 305 KDRDRKR---RSRSRERKRERDRDREKKEERV-----EAEVPEADDAPQDDAQIGDLGID 364

Query: 402 RVESKYE-KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRG 461
            +E K E +++  +RDR+RD DR             E G +D D D         +R R 
Sbjct: 365 GIELKQEPEEKSRERDRERDRDR-------------EKGEKDRDKD--------RDRDR- 424

Query: 462 QYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERSHSRE 503
             D+   HRD+DR        D D   +R      DRER +D   E  R +RS  RE
Sbjct: 425 --DRRRSHRDRDR------EKDRDRDRDRRRDRDRDRERDKDHKRERDRGDRSEKRE 424

[Close]
BLAST of Cmc08g0216201 vs. ExPASy Swiss-Prot
Match: Q62376 (U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 1.6e-54
Identity = 174/399 (43.61%), Postives = 223/399 (55.89%), Query Frame = 0 

Query: 42  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGE 101
           L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + E
Sbjct: 5   LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREF---EDPRDAPPPTRAE 64

Query: 102 TPAERRARIHLLRIEKGAEKAAEELPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKR 161
           T  ER  R    +IE+  ++   EL  +   +DPN  GD +KTLFVAR+NY+TTES+++R
Sbjct: 65  TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 124

Query: 162 EFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERG 221
           EFE YGPIKR+ ++  K +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERG
Sbjct: 125 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 184

Query: 222 RTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREK 281
           RTV  WRPRRLGGGLG TR GG + + RHSGR+            P    DR  +R+RE+
Sbjct: 185 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERER 244

Query: 282 SYDKGRDRERDREKSREHSHERSKERDVR-EDRHHRDRDRTRDRDRDRDRERDRGYDRDR 341
              + R RERD+E+ R  S  R + R  R  D+  R R R R +D+DRDR+R     R+R
Sbjct: 245 ---RERSRERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRER 304

Query: 342 TRDRGRDR--------------------GRDYERDRDRDRHRDRDRERDRDHEGGYPDPD 401
            R R R+R                    G   E     D   D     +   EG  PD  
Sbjct: 305 AR-RERERKEELRGGGGGGGGGSGGGGGGDMAEPSEAGDGAPDDGPPGELGPEG--PDGP 364

Query: 402 RGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDG 415
             +  DRD   R   + E++R  DRDRDRD +    E G
Sbjct: 365 EEKGRDRDRERRRSHRSERERRRDRDRDRDREHKRGERG 394

[Close]
BLAST of Cmc08g0216201 vs. ExPASy TrEMBL
Match: A0A1S3B1S2 (U1 small nuclear ribonucleoprotein 70 kDa OS=Cucumis melo OX=3656 GN=LOC103485041 PE=4 SV=1)

HSP 1 Score: 943.3 bits (2437), Expect = 4.0e-271
Identity = 502/505 (99.41%), Postives = 503/505 (99.60%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRER+REKSREHSHERSK
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRDRDRE--RDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD 360
           ERDVREDRHHRDRDRTRDRDRDRDRE  RDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD
Sbjct: 301 ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRD 360

Query: 361 RDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWY 420
           RDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWY
Sbjct: 361 RDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWY 420

Query: 421 DQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSE 480
           DQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSE
Sbjct: 421 DQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSE 480

Query: 481 SHDRERSRDLNHEYKRSERSHSREY 504
           SHDRERSRDLNHEYKRSERSHSREY
Sbjct: 481 SHDRERSRDLNHEYKRSERSHSREY 505

[Close]
BLAST of Cmc08g0216201 vs. ExPASy TrEMBL
Match: A0A0A0KGZ1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502610 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.0e-266
Identity = 496/507 (97.83%), Postives = 499/507 (98.42%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETP ERRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRHSGREQQQSGAPSRSEEPR REDRHGERDREKSYDKGRDRERDREKSREHSHERSK
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRVREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRDRD----RERDRGYDRDRTRDRGRDRGRDYERDRDRDRH 360
           ERDVREDRHHRDRDRTRDRDRDRD    R+RDRGYDRDRTRDRGRDRGRDYERDRDRDRH
Sbjct: 301 ERDVREDRHHRDRDRTRDRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRH 360

Query: 361 RDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRG 420
           RDRDRER+RDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG  DRDRD+DRAETEDGRG
Sbjct: 361 RDRDRERERDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG--DRDRDVDRAETEDGRG 420

Query: 421 WYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGN 480
           WYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGN
Sbjct: 421 WYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGN 480

Query: 481 SESHDRERSRDLNHEYKRSERSHSREY 504
           SESHDRERSRDLNHEYKRSERSHSREY
Sbjct: 481 SESHDRERSRDLNHEYKRSERSHSREY 505

[Close]
BLAST of Cmc08g0216201 vs. ExPASy TrEMBL
Match: A0A6J1BSC4 (U1 small nuclear ribonucleoprotein 70 kDa OS=Momordica charantia OX=3673 GN=LOC111005312 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 5.9e-246
Identity = 472/513 (92.01%), Postives = 491/513 (95.71%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPA+RRARIHLLRIEKGAEKAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAQRRARIHLLRIEKGAEKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           N+QRHSGREQQQSGAPSRSEEPR REDRHGERDREKS++KGRDRER+REKSRE SHERSK
Sbjct: 241 NNQRHSGREQQQSGAPSRSEEPRGREDRHGERDREKSHEKGRDREREREKSRERSHERSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRD--RDRERDRGYDRDRT--RDRGRDRGRDYE--RDRDRD 360
           +RD+REDRHHRDRDRTRDRDRD  R+RERDRGYDRD+T  RDRGRDRGRDYE  RDRDRD
Sbjct: 301 DRDLREDRHHRDRDRTRDRDRDRERERERDRGYDRDKTRDRDRGRDRGRDYERDRDRDRD 360

Query: 361 RHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAETED 420
           RHRDRDRERDR+HE GYP+PDRGRSHDR+ DYDRVESKYEKDRHG  DRDR++DR ETED
Sbjct: 361 RHRDRDRERDRNHEDGYPEPDRGRSHDRESDYDRVESKYEKDRHG--DRDREIDRTETED 420

Query: 421 GRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQY-DQPEGHRDQDRYDQYDDRMDDDY 480
           GRGWYDQ EHGHR  D DHDPQYYDHFEHNRGRGQY D PEGH DQDRYDQY DRM+DDY
Sbjct: 421 GRGWYDQSEHGHRHPDPDHDPQYYDHFEHNRGRGQYDDNPEGHHDQDRYDQY-DRMEDDY 480

Query: 481 HYERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           HYERG SESHD+ERSRD+NHEY+RSERSHSREY
Sbjct: 481 HYERGTSESHDKERSRDMNHEYRRSERSHSREY 510

[Close]
BLAST of Cmc08g0216201 vs. ExPASy TrEMBL
Match: A0A6J1HIB1 (U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111463239 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.5e-236
Identity = 456/515 (88.54%), Postives = 482/515 (93.59%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++RRARIHLLRIEKGA+KA EE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAVEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDRER+REKSRE SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRD----RDRERDRGYDRDRT--RDRGRDRGRDYE--RDRD 360
           +RD+REDRHHRDRDRT DRDRD    R+RERDRG+DRDRT  RDRGRDRGRDYE  RDRD
Sbjct: 301 DRDLREDRHHRDRDRTIDRDRDREKERERERDRGHDRDRTRDRDRGRDRGRDYERDRDRD 360

Query: 361 RDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAET 420
           RDRHRDRDRERDRDHEGG+ DPDRGRSHDR+ DYDR++SKYEKDRHG  DRD+D+D  ET
Sbjct: 361 RDRHRDRDRERDRDHEGGFADPDRGRSHDRESDYDRIDSKYEKDRHG--DRDKDIDPGET 420

Query: 421 EDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDD 480
           EDG GWYDQP HGHR   D DHDPQYYDHFEHNR R QYD PE H  QDRYDQY DRM+D
Sbjct: 421 EDGHGWYDQPAHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQY-DRMED 480

Query: 481 DYHYERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           DY YERG SE+ DRERSRDLNHEY+R+ERSHSRE+
Sbjct: 481 DYRYERGTSETRDRERSRDLNHEYRRTERSHSREF 511

[Close]
BLAST of Cmc08g0216201 vs. ExPASy TrEMBL
Match: A0A6J1KS72 (U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111496769 PE=4 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.2e-235
Identity = 456/515 (88.54%), Postives = 482/515 (93.59%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KP
Sbjct: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++RRARIHLLRIEKGA+KAAEE
Sbjct: 61  PPEKRKCPPLTGMAQFVSHFAEPDDPEYAPPVQEGETPSQRRARIHLLRIEKGAQKAAEE 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           LPKYLERDDPNVTGDPYKTLFVARLNYET+ESRIKREFESYGPIKRVRLITDKVTGKPKG
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLITDKVTGKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
           NSQRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDRER+REKSRE SH+RSK
Sbjct: 241 NSQRHAGREQQQSGAPSRSEEPRAREDRHGERDREKSYEKGRDREREREKSRERSHDRSK 300

Query: 301 ERDVREDRHHRDRDRTRDRDRD----RDRERDRGYDRDRT--RDRGRDRGRDYE--RDRD 360
           + D+REDRHHRDRDRTRDRDRD    R+RER+RG+DRDRT  RDRGRDRGRDYE  RDRD
Sbjct: 301 DHDLREDRHHRDRDRTRDRDRDREKERERERERGHDRDRTRDRDRGRDRGRDYERDRDRD 360

Query: 361 RDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYEKDRHGDRDRDRDMDRAET 420
           RDRHRDRDRERDRDH GGY DPDRGRSHDR+ DYDRV+SKYEKDRHG  DRD+D+D  ET
Sbjct: 361 RDRHRDRDRERDRDHGGGYADPDRGRSHDRESDYDRVDSKYEKDRHG--DRDKDIDPGET 420

Query: 421 EDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDD 480
           EDG GWYDQP HGHR   D DHDPQYYDHFEHNR R QYD PE H  QDRYDQY DRM+D
Sbjct: 421 EDGHGWYDQPVHGHRHPPDTDHDPQYYDHFEHNRSREQYDHPE-HHGQDRYDQY-DRMED 480

Query: 481 DYHYERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           DY YERG SE+ DRERSRDLNHEY+R++RSHSRE+
Sbjct: 481 DYRYERGTSETRDRERSRDLNHEYRRADRSHSREF 511

[Close]
BLAST of Cmc08g0216201 vs. TAIR 10
Match: AT3G50670.1 (U1 small nuclear ribonucleoprotein-70K )

HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-126
Identity = 305/511 (59.69%), Postives = 348/511 (68.10%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1   MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPP TGMAQFVSNFAEP DPEYAPP  + E P+++R RIH LR+EKG EKAAE+
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
           L KY   +DPN TGDPYKTLFV+RLNYE++ES+IKREFESYGPIKRV L+TD++T KPKG
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG 180

Query: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
           YAFIEYMH RDMKAAYKQADG+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGG E
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE 240

Query: 241 NSQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYDKGRDRERDREKSREHSHERS 300
                   EQQ  G  S+SEEP R RE      +REKS +KG++RER RE S E   ERS
Sbjct: 241 EIV----GEQQPQGRTSQSEEPSRPRE------EREKSREKGKERERSRELSHEQPRERS 300

Query: 301 KERDVREDRHHRDRD---RTRDRD--RDRDRERDRGYDRDRTRDRGRDRGRDYERDRDRD 360
           ++R  RED+HHRDRD   R RDRD  RDRDR RDRG DRDR   R RDRGRD      RD
Sbjct: 301 RDRP-REDKHHRDRDQGGRDRDRDSRRDRDRTRDRG-DRDR---RDRDRGRD---RTSRD 360

Query: 361 RHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMD-RAETED 420
             RDR R+++RD+EGG                    +YE +  G R R+RD + R E E+
Sbjct: 361 HDRDRSRKKERDYEGG--------------------EYEHE-GGGRSRERDAEYRGEPEE 420

Query: 421 GRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYD-QYDDRMDDDYHY 480
            RG+Y+                               +   D DRY  +YD   +DD+ Y
Sbjct: 421 TRGYYE-------------------------------DDQGDTDRYSHRYDKMEEDDFRY 425

Query: 481 ERGNSESHDRERSRDLNHEYKRSERSHSREY 504
           ER                EYKRS+RS SREY
Sbjct: 481 ER----------------EYKRSKRSESREY 425

[Close]
BLAST of Cmc08g0216201 vs. TAIR 10
Match: AT3G50670.2 (U1 small nuclear ribonucleoprotein-70K )

HSP 1 Score: 271.6 bits (693), Expect = 1.3e-72
Identity = 132/167 (79.04%), Postives = 146/167 (87.43%), Query Frame = 0 

Query: 1   MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
           MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLE+KP
Sbjct: 1   MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60

Query: 61  PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEE 120
           PPEKRKCPP TGMAQFVSNFAEP DPEYAPP  + E P+++R RIH LR+EKG EKAAE+
Sbjct: 61  PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120

Query: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRV 168
           L KY   +DPN TGDPYKTLFV+RLNYE++ES+IKREFESYGPIKRV
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRV 167

[Close]
BLAST of Cmc08g0216201 vs. TAIR 10
Match: AT2G43370.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 79.7 bits (195), Expect = 7.3e-15
Identity = 89/260 (34.23%), Postives = 122/260 (46.92%), Query Frame = 0 

Query: 129 DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMH 188
           D    GDPY TLFV RL++ TTE  ++     YG IK +RL+   VTG  +GY F+EY  
Sbjct: 55  DSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYET 114

Query: 189 KRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGL------GTTRVGGEENS 248
           +++M  AY+ A    IDGR ++VD  R + +P W PRRLGGGL      G  R GG +  
Sbjct: 115 EKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRP 174

Query: 249 QR-------------------HSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRD 308
            R                     GR   ++  PS      +  DR  E  REKS  +  +
Sbjct: 175 FRAPLRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSDREEEYYREKSSVEREE 234

Query: 309 RERDREKSRE-HSHERSKERDVREDRHHRDRDR-TRDRDRDRDRERDRG----YDRDRTR 358
             ++R   R  HSH  S        R  +DR+  +R+  R   +ER RG    Y  ++  
Sbjct: 235 EFKERSSLRSYHSHRSSAHTHSSHRRRSKDREECSREESRSDRKERARGMEDRYGDNKGE 294

[Close]
BLAST of Cmc08g0216201 vs. TAIR 10
Match: AT5G53440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-06
Identity = 88/214 (41.12%), Postives = 109/214 (50.93%), Query Frame = 0 

Query: 251 QQSGAPSRSEEP---RAREDRHGERDREKSYDKGRDRERDREKSRE----HSHERSKERD 310
           +Q G   R + P     R D    RD  K   K +D +   E   E    H  ER+++ D
Sbjct: 251 KQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDNDHGHEPDSELDGYHERERNRDYD 310

Query: 311 VREDRHHRDRDRTRDRDRDRDRERDRGYDRDRTRDRGRDRGRDYERDR--DRDRHRDRDR 370
              DR+ RDR+RTRDRDRD +R+RDR  DRDR RDR R   RDYE DR  DRD  RDR R
Sbjct: 311 RESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDR---RDYEHDRYHDRDWDRDRSR 370

Query: 371 ERDRDHEGGYPDPDRGRSHDRDDYDRVESKYE--KDRHGDRDRDRDMDRAETEDGRGWYD 430
           +RDRDHE       R R+HDR+  DR    Y   K    DR+RD D D +  +D  G Y 
Sbjct: 371 DRDRDHE-------RDRTHDREK-DRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYK 430

Query: 431 QPEHGHRDADHDPQYYDHFEHNRG-RGQYDQPEG 453
                 RD    P Y D+ +   G R    +P+G
Sbjct: 431 D----RRDGRRSPDYQDYQDVITGSRSSRVEPDG 449

[Close]
BLAST of Cmc08g0216201 vs. TAIR 10
Match: AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 4.4e-04
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 0 

Query: 289 EKSREHSHERSKERDVREDRHHRDR--------------DRTRDRDRDRDRERDRGYDRD 348
           +K RE    + ++  + E R  R++              D  RD+DRDRDR+RDR  DRD
Sbjct: 30  KKQREELALKRRQDQISEQRVRREQLGRPEPETEDVSNGDTNRDKDRDRDRDRDRERDRD 89

Query: 349 RTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEK 408
           R RDRGRDR RD +RDRDRDR R+RDRERDR      PD  R R  +R++  +   K   
Sbjct: 90  RERDRGRDRDRDRDRDRDRDRERERDRERDRRERDREPD-RRNREKEREEEVKAREKARV 149

The following BLAST results are available for this feature:
BLAST of Cmc08g0216201 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440701.18.3e-27199.41PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Cucumis melo][more]
XP_004143506.12.1e-26697.83U1 small nuclear ribonucleoprotein 70 kDa [Cucumis sativus] >KGN48823.1 hypothet... [more]
XP_038881482.17.6e-25695.09U1 small nuclear ribonucleoprotein 70 kDa [Benincasa hispida][more]
XP_022132461.11.2e-24592.01U1 small nuclear ribonucleoprotein 70 kDa [Momordica charantia][more]
XP_023517571.13.5e-23789.13U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo] >XP_... [more]
BLAST of Cmc08g0216201 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q424042.2e-12559.69U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU... [more]
Q66II85.6e-6043.07U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp... [more]
P086212.1e-5946.06U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=... [more]
P094062.6e-5742.14U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis OX=8355 GN=snrnp70 P... [more]
Q623761.6e-5443.61U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE... [more]
BLAST of Cmc08g0216201 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B1S24.0e-27199.41U1 small nuclear ribonucleoprotein 70 kDa OS=Cucumis melo OX=3656 GN=LOC10348504... [more]
A0A0A0KGZ11.0e-26697.83RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502610 PE=4 SV... [more]
A0A6J1BSC45.9e-24692.01U1 small nuclear ribonucleoprotein 70 kDa OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1HIB15.5e-23688.54U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1KS721.2e-23588.54U1 small nuclear ribonucleoprotein 70 kDa-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of Cmc08g0216201 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G50670.11.6e-12659.69U1 small nuclear ribonucleoprotein-70K [more]
AT3G50670.21.3e-7279.04U1 small nuclear ribonucleoprotein-70K [more]
AT2G43370.17.3e-1534.23RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G53440.12.1e-0641.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G33730.14.4e-0440.60P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 139..212
e-value: 5.4E-25
score: 99.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 140..209
e-value: 7.1E-20
score: 70.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 138..216
score: 18.222727
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 126..250
e-value: 3.5E-38
score: 132.6
IPR022023U1 small nuclear ribonucleoprotein of 70kDa N-terminalPFAMPF12220U1snRNP70_Ncoord: 41..129
e-value: 1.8E-15
score: 57.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..503
NoneNo IPR availablePANTHERPTHR13952:SF22SUBFAMILY NOT NAMEDcoord: 1..361
NoneNo IPR availablePANTHERPTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDcoord: 1..361
IPR034143snRNP70, RNA recognition motifCDDcd12236RRM_snRNP70coord: 137..227
e-value: 1.85135E-55
score: 178.594
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 128..242

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0216201.1Cmc08g0216201.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0071004 U2-type prespliceosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0030619 U1 snRNA binding
molecular_function GO:0003676 nucleic acid binding