Cmc08g0211131 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0211131
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 2579549 .. 2581107 (+)
RNA-Seq ExpressionCmc08g0211131
SyntenyCmc08g0211131
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTATGTTATGGATATACTCAAAATTGGATTGATATAAAAATAAAAATTGATAAAAGAATCTCAAACAAAAATTAAAGTTATATGTATCGTTAGTGTTTTCTTTACATGATTGGATGGAGTTGATATTACTCATCTCTTAAGAATCAACAAATCAGAACATCAAAAGAAAAAATCAATCAGAAGAGCTTGCTGGCAAATTCATCCATGGAAATTCCTTCCTCTCTAGCTGCAGCTGATTTAGTGGCCAATTGTCTAAGCTGAGATAAGCTTCTTCCCAATTTCAAAGCCACTTTCCTTTCAAACACTTCACCATTTTCCCTCTTCTCCCATTCTTTCTCCTCAAGTGTCCCTCTAATGGATTCTTCCAATAGCCCAAAGAAGCCGGCTGTATTCCTATACATCTCGAACACCATCCCAATTTGCCCACCGTGCTCTAACGCGTTTACGGCGGCCGCTAATGATCCGGCTGCCGCAGCCACTGCCATCCCTGCGGATGACCAATCACCCACAAAAGCAGAACTCAAAGCCGCAATGCCGGTGAGAACAGGGCCTGAAGTTGCCAATGTTTTATTAACCTTCAAAACTAAATTCCCAAGCCTAACGTAATCTTCGGCGTCTTTTGACTTCACGATTTCAACAACTTCTCTCATTTCGGCCTCAAGTTCATCGCTCCACCCATTGGATTCTCGACCTTGCTTTGCATCTAAATGGGTGTTTTCGTTCTTCGTCTGGGATTCGTAGTTTTCAGAAGAATTGGGCCACCACGAAGCCGGCTCGAACGTTTTGGGGAATTTTTCAAGCATTACACCAAGTAAAGGAAGTGGGTATGCTTTATCGAGCGCCAACACTTTTTCCATGGCGGAGTCGACGTCCATTTGAGTGGGAGCTCCATCAAGAATCAAGCTTTGGATTTGGGTTTGGAGCTGCTTAAACAATCTAACCGCATTTCGCTGCTCCTCAGCCAATTGTGAGGGTTGAATTTTGTTCACCATCACCAACATCCCTGTTGCAGCAGAGAAAAGCAGAGCCGATGACACTTTGAGAGCCAAAAGAGGAGCTCCGAGGGATCCGACGGCGGGTGCGGAGGCGGCGAGGGCAGAAGCGGTGAGAGTTATCAGATTGATGGAATTGAGGAAAAGAGAATTCCAATTGTCTCGCTGTTGGCGAATGTTGTTGTGCATTTCTACACGATCGGCTACGGCTTCTAAGATGGCGTGGAGCTGTGATTTGAGAGGGGATTCTGTAGGAATAACATTAATAATGGGTTGGTTTAAACAAAGTTGCTCGATCATTTTAACGGAAGCCGTGGAAGTTTTGGGGAGTTTGGTAGCGGAGATTCTGAGATTAGGAAGCTTTGGGATGTGAATAGAGGCATTGGTAGTGGATGTTTCTGAATAATGGGAAGCCGAGAAGAGGGATAAAGATCGTAAGGAAGCCATTTGTTGAAACTTTTTCTTAATTTTGGGAAAGAGAGGAATGAGAAGGTTAGTGTTTTTGTAATGAATTGACGATGAATACGTTTATGGTAGCTGATTTTATAGGGCAAATGAATTATTGA

mRNA sequence

GCTATGTTATGGATATACTCAAAATTGGATTGATATAAAAATAAAAATTGATAAAAGAATCTCAAACAAAAATTAAAGTTATATGTATCGTTAGTGTTTTCTTTACATGATTGGATGGAGTTGATATTACTCATCTCTTAAGAATCAACAAATCAGAACATCAAAAGAAAAAATCAATCAGAAGAGCTTGCTGGCAAATTCATCCATGGAAATTCCTTCCTCTCTAGCTGCAGCTGATTTAGTGGCCAATTGTCTAAGCTGAGATAAGCTTCTTCCCAATTTCAAAGCCACTTTCCTTTCAAACACTTCACCATTTTCCCTCTTCTCCCATTCTTTCTCCTCAAGTGTCCCTCTAATGGATTCTTCCAATAGCCCAAAGAAGCCGGCTGTATTCCTATACATCTCGAACACCATCCCAATTTGCCCACCGTGCTCTAACGCGTTTACGGCGGCCGCTAATGATCCGGCTGCCGCAGCCACTGCCATCCCTGCGGATGACCAATCACCCACAAAAGCAGAACTCAAAGCCGCAATGCCGGTGAGAACAGGGCCTGAAGTTGCCAATGTTTTATTAACCTTCAAAACTAAATTCCCAAGCCTAACGTAATCTTCGGCGTCTTTTGACTTCACGATTTCAACAACTTCTCTCATTTCGGCCTCAAGTTCATCGCTCCACCCATTGGATTCTCGACCTTGCTTTGCATCTAAATGGGTGTTTTCGTTCTTCGTCTGGGATTCGTAGTTTTCAGAAGAATTGGGCCACCACGAAGCCGGCTCGAACGTTTTGGGGAATTTTTCAAGCATTACACCAAGTAAAGGAAGTGGGTATGCTTTATCGAGCGCCAACACTTTTTCCATGGCGGAGTCGACGTCCATTTGAGTGGGAGCTCCATCAAGAATCAAGCTTTGGATTTGGGTTTGGAGCTGCTTAAACAATCTAACCGCATTTCGCTGCTCCTCAGCCAATTGTGAGGGTTGAATTTTGTTCACCATCACCAACATCCCTGTTGCAGCAGAGAAAAGCAGAGCCGATGACACTTTGAGAGCCAAAAGAGGAGCTCCGAGGGATCCGACGGCGGGTGCGGAGGCGGCGAGGGCAGAAGCGGTGAGAGTTATCAGATTGATGGAATTGAGGAAAAGAGAATTCCAATTGTCTCGCTGTTGGCGAATGTTGTTGTGCATTTCTACACGATCGGCTACGGCTTCTAAGATGGCGTGGAGCTGTGATTTGAGAGGGGATTCTGTAGGAATAACATTAATAATGGGTTGGTTTAAACAAAGTTGCTCGATCATTTTAACGGAAGCCGTGGAAGTTTTGGGGAGTTTGGTAGCGGAGATTCTGAGATTAGGAAGCTTTGGGATGTGAATAGAGGCATTGGTAGTGGATGTTTCTGAATAATGGGAAGCCGAGAAGAGGGATAAAGATCGTAAGGAAGCCATTTGTTGAAACTTTTTCTTAATTTTGGGAAAGAGAGGAATGAGAAGGTTAGTGTTTTTGTAATGAATTGACGATGAATACGTTTATGGTAGCTGATTTTATAGGGCAAATGAATTATTGA

Coding sequence (CDS)

ATGGATTCTTCCAATAGCCCAAAGAAGCCGGCTGTATTCCTATACATCTCGAACACCATCCCAATTTGCCCACCGTGCTCTAACGCGTTTACGGCGGCCGCTAATGATCCGGCTGCCGCAGCCACTGCCATCCCTGCGGATGACCAATCACCCACAAAAGCAGAACTCAAAGCCGCAATGCCGGTGAGAACAGGGCCTGAAGTTGCCAATGTTTTATTAACCTTCAAAACTAAATTCCCAAGCCTAACGTAA

Protein sequence

MDSSNSPKKPAVFLYISNTIPICPPCSNAFTAAANDPAAAATAIPADDQSPTKAELKAAMPVRTGPEVANVLLTFKTKFPSLT
Homology
[Close]
BLAST of Cmc08g0211131 vs. NCBI nr
Match: RDX94117.1 (putative F-box protein, partial [Mucuna pruriens])

HSP 1 Score: 70.9 bits (172), Expect = 6.0e-09
Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 4   SNSPKKPAVFLYISNTIPICPPCSNAFTAAANDPAAAATAIPADDQSPTKAELKAAMPVR 63
           SNS K P  FLYIS T+P  PPCS A T  AN+PA   T   A D  PT  +  AAMP+ 
Sbjct: 480 SNSVKNPPQFLYISKTMPTWPPCSKALTTEANEPAMRGTN-AAHDPLPTNEDPNAAMPLS 539

Query: 64  TGPEVANVLLTFKTKFPSLT 84
            GP +A +LL F   FPSL+
Sbjct: 540 KGPAIAKLLLIFNAMFPSLS 558

[Close]
BLAST of Cmc08g0211131 vs. ExPASy TrEMBL
Match: A0A371GU85 (Putative F-box protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_23526 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-09
Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 4   SNSPKKPAVFLYISNTIPICPPCSNAFTAAANDPAAAATAIPADDQSPTKAELKAAMPVR 63
           SNS K P  FLYIS T+P  PPCS A T  AN+PA   T   A D  PT  +  AAMP+ 
Sbjct: 480 SNSVKNPPQFLYISKTMPTWPPCSKALTTEANEPAMRGTN-AAHDPLPTNEDPNAAMPLS 539

Query: 64  TGPEVANVLLTFKTKFPSLT 84
            GP +A +LL F   FPSL+
Sbjct: 540 KGPAIAKLLLIFNAMFPSLS 558

The following BLAST results are available for this feature:
BLAST of Cmc08g0211131 vs. NCBI nr
Match NameE-valueIdentityDescription
RDX94117.16.0e-0951.25putative F-box protein, partial [Mucuna pruriens][more]
BLAST of Cmc08g0211131 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0211131 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A371GU852.9e-0951.25Putative F-box protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_23526 PE... [more]
BLAST of Cmc08g0211131 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0211131.1Cmc08g0211131.1mRNA