Cmc07g0205171 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0205171
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionmitochondrial zinc maintenance protein 1, mitochondrial
LocationCMiso1.1chr07: 26145907 .. 26147428 (-)
RNA-Seq ExpressionCmc07g0205171
SyntenyCmc07g0205171
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTTAGTGCTTTCGTGATGTAAATGTAATGAGTCATCCACATGAAAAGTAAAAATAGAAAGACAAGAGCTTTGGTATTTGAACGAAACGACGTCGTGACCTTTTGGGAGCTTCATTGTTCGTGAGGAAGCGCAGAAACCCATTTCAAGAGGGATCTCATCACATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAAGTCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGGCTGAGATTCGGAAACTGCTCGATGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCGTACTTCTCGCGGCGGCTATGGTATTCTTCTTTTCTATTTTGGGATTCATTTTCGGTGTTCTTAACAACTAATCTAACAATTGGCTAATCGAATATTGAATTTGAAATGAACGCCTGGCAGCCTACATGTTTGATAAAATGCTTCACCCAAAATTTTCCGCTTTTTATTTACTGAAAGCTAGTGGGTTCGTAGAAAAACGCTGAAACTATTGATTACTCTTCTGGAGTTATTTGGTTTTTAATTCTACTTGGCCGGTGTTTATGAAGACTTAGATTGAGAATGCGTGAACTGTATCGTAGAACAGATTATAGAAACACGAGTTTGTGTGATCTAGATTTTTGTTTACTTAACTTGGATAGCAGTGTTCCTTTTCCTTTCTTGAGTTCAATAAAGAGTGAGGATTCAAACATCATACGTCCAAAGGAGATTATCAATGCCTTAACCTATTGATACATTCTCAAGTTGGATGGGGTGTTTATAGCAAACTCACAAATTGGGATAAAATAAACCCGTATTTGAAACAGAAGTTTGTGTTCTTAACTTTGAATTATACAAACCCATCCAAGGAATCAAATACCTTTCAAGCTTCTAACTTTAGAACTCAAGGACACCGTTATACAACCTATAGAACAGATGAAGTTCAACCTTTTAAGGTTCTAACTTAACGTGCCAAACTTCCTAAAATTTTTCTCTCAATCCTTGTAAATAAAACCTAAGAGCCAAACATTAATTTTGGTTATTGCTGCAGAAATGAAACCGCGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTACGCAAATCTAAATGAGGAGGTGAGATGATGGATGCTGACTTCCAATTTGACAATTGTTTTAACTTTCAGCTATTTGCTCTTGCCCTAGGAGGATCTTGGAAAAGTTTTCTGTTTCCTTTTGTTGGTCCATTTCATATCCATATTTATTTGTGCTCAGTTAAATGTACTTGGTTGGTAAAAGGTTCTTGCATTGGGCTAATGAAAGTCCCAATCTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAAATTTGGCTTACAAATTTTTAGTTAATGAAATTTTCTAGAATGATCTTTTCAAGAAGCCTG

mRNA sequence

TTTGTTAGTGCTTTCGTGATGTAAATGTAATGAGTCATCCACATGAAAAGTAAAAATAGAAAGACAAGAGCTTTGGTATTTGAACGAAACGACGTCGTGACCTTTTGGGAGCTTCATTGTTCGTGAGGAAGCGCAGAAACCCATTTCAAGAGGGATCTCATCACATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAAGTCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGGCTGAGATTCGGAAACTGCTCGATGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCGTACTTCTCGCGGCGGCTATGAAATGAAACCGCGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTACGCAAATCTAAATGAGGAGGTGAGATGATGGATGCTGACTTCCAATTTGACAATTGTTTTAACTTTCAGCTATTTGCTCTTGCCCTAGGAGGATCTTGGAAAAGTTTTCTGTTTCCTTTTGTTGGTCCATTTCATATCCATATTTATTTGTGCTCAGTTAAATGTACTTGGTTGGTAAAAGGTTCTTGCATTGGGCTAATGAAAGTCCCAATCTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAAATTTGGCTTACAAATTTTTAGTTAATGAAATTTTCTAGAATGATCTTTTCAAGAAGCCTG

Coding sequence (CDS)

ATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAAGTCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGGCTGAGATTCGGAAACTGCTCGATGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCGTACTTCTCGCGGCGGCTATGAAATGAAACCGCGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTACGCAAATCTAAATGA

Protein sequence

MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREASHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK
Homology
[Close]
BLAST of Cmc07g0205171 vs. NCBI nr
Match: XP_008454342.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 2.9e-45
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLL+EAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAKRTSRGGYEMKP KDHAGATLEVPSEELLRKSK
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK 104

[Close]
BLAST of Cmc07g0205171 vs. NCBI nr
Match: XP_004152250.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52811.1 hypothetical protein Csa_014848 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 3.6e-43
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           MKGEVLSAYRSLLRATK+SFAGDTLMLTESASEIRRKFQESRHVTSE EIRKLL+EAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKP KDHAGATLEVP+EELLRKSK
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 104

[Close]
BLAST of Cmc07g0205171 vs. NCBI nr
Match: XP_038905396.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 4.7e-43
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           MKGEVLSAYR+LLRATKKSFAGDTLMLTESASE+RRKF+ESRHVTSEAEIRKLL+EAREA
Sbjct: 1   MKGEVLSAYRALLRATKKSFAGDTLMLTESASEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAK TSRGGYEMKP KDHAGATLEVPSEELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]
BLAST of Cmc07g0205171 vs. NCBI nr
Match: XP_022155304.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           M+GEVLSAYR+LLRAT KSFAGDTLMLTESA+E+RRKF+ESRHVTSEAEIRKLL+EAREA
Sbjct: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAK TSRGGYEMKP KDHAGATLEVPSEELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]
BLAST of Cmc07g0205171 vs. NCBI nr
Match: XP_022949021.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP_023524456.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-40
Identity = 91/104 (87.50%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           +KGEVLSAYR+LLRATKKSFAGDTLML ESA+E+RRKF+ESRHVTS+ EIRKLL+EAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKP K+HAGATLEVPSEELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK 105

[Close]
BLAST of Cmc07g0205171 vs. ExPASy Swiss-Prot
Match: C4Y4R9 (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae (strain ATCC 42720) OX=306902 GN=MZM1 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.4e-04
Identity = 32/104 (30.77%), Postives = 53/104 (50.96%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           M    L AYR+ LRAT+ +F GD  +L  + ++IR     +R +  + E+ K + E  E 
Sbjct: 1   MSNPALQAYRTALRATRVAFNGDNFVLKSARAKIREGLLSNRDLADKMEVEKKVAELNEV 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           + F+   IVQ ++    G +    K H     E+ S E +++SK
Sbjct: 61  AQFLVKNIVQGEKEE--GKDRYLLKIH--DKTELGSNETIKQSK 100

[Close]
BLAST of Cmc07g0205171 vs. ExPASy TrEMBL
Match: A0A1S3BYH1 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494771 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLL+EAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAKRTSRGGYEMKP KDHAGATLEVPSEELLRKSK
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK 104

[Close]
BLAST of Cmc07g0205171 vs. ExPASy TrEMBL
Match: A0A0A0KY80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           MKGEVLSAYRSLLRATK+SFAGDTLMLTESASEIRRKFQESRHVTSE EIRKLL+EAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKP KDHAGATLEVP+EELLRKSK
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 104

[Close]
BLAST of Cmc07g0205171 vs. ExPASy TrEMBL
Match: A0A6J1DPV6 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022436 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.6e-42
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           M+GEVLSAYR+LLRAT KSFAGDTLMLTESA+E+RRKF+ESRHVTSEAEIRKLL+EAREA
Sbjct: 1   MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKS 104
           SHFISNMIVQAK TSRGGYEMKP KDHAGATLEVPSEELLRKS
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPSEELLRKS 103

[Close]
BLAST of Cmc07g0205171 vs. ExPASy TrEMBL
Match: A0A6J1GAU2 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452487 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-40
Identity = 91/104 (87.50%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           +KGEVLSAYR+LLRATKKSFAGDTLML ESA+E+RRKF+ESRHVTS+ EIRKLL+EAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKP K+HAGATLEVPSEELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK 105

[Close]
BLAST of Cmc07g0205171 vs. ExPASy TrEMBL
Match: A0A6J1KH11 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493140 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.9e-40
Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREA 60
           +KGEVLSAYR+LLRATKKSFAGDTLML ESA+E+RRKF+ESRHVTS+ EIRKLL+EAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMK  K+HAGATLEVPSEELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKASKEHAGATLEVPSEELLRRSK 105

[Close]
BLAST of Cmc07g0205171 vs. TAIR 10
Match: AT3G62810.1 (complex 1 family protein / LVR family protein )

HSP 1 Score: 134.4 bits (337), Expect = 5.2e-32
Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 0 

Query: 3   GEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLDEAREASH 62
           GE L AYR+LLRATKKSFAGDT ML  SASEIR+KF+E+R V S ++I +LL+EAREA+ 
Sbjct: 4   GEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQ 63

Query: 63  FISNMIVQAKRTSRGGYEMKPRKDHAGATLEVPSEELLRK 103
           FIS MIVQAK   RGGYEMK  ++HAGATLE+PSEE+LRK
Sbjct: 64  FISTMIVQAKLNERGGYEMKASQEHAGATLELPSEEMLRK 103

The following BLAST results are available for this feature:
BLAST of Cmc07g0205171 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454342.12.9e-4598.08PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo... [more]
XP_004152250.13.6e-4394.23mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52... [more]
XP_038905396.14.7e-4394.17mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida][more]
XP_022155304.11.2e-4191.26mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia][more]
XP_022949021.12.2e-4087.50mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP... [more]
BLAST of Cmc07g0205171 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C4Y4R94.4e-0430.77Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae... [more]
BLAST of Cmc07g0205171 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYH11.4e-4598.08mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 ... [more]
A0A0A0KY801.7e-4394.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1[more]
A0A6J1DPV65.6e-4291.26mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia O... [more]
A0A6J1GAU21.1e-4087.50mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX... [more]
A0A6J1KH118.9e-4086.54mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3... [more]
BLAST of Cmc07g0205171 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G62810.15.2e-3271.00complex 1 family protein / LVR family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 4..60
e-value: 2.0E-12
score: 47.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..104
NoneNo IPR availablePANTHERPTHR46749COMPLEX III ASSEMBLY FACTOR LYRM7coord: 3..103
NoneNo IPR availableCDDcd20267Complex1_LYR_LYRM7coord: 5..76
e-value: 5.00989E-25
score: 87.6191

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0205171.1Cmc07g0205171.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045333 cellular respiration
biological_process GO:0034551 mitochondrial respiratory chain complex III assembly
biological_process GO:0006457 protein folding
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0004386 helicase activity
molecular_function GO:0044183 protein folding chaperone