Cmc07g0200621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0200621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Phosphopantothenoylcysteine decarboxylase subunit VHS3-like
Location	CMiso1.1chr07: 23160485 .. 23163075 (+)
RNA-Seq Expression	Cmc07g0200621
Synteny	Cmc07g0200621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGACGACGACGATTGTTCTATCGACTACACCGCATGGAGACGACGATGATTGTTCTATCGACTACACCGCATGGAGACGACGATGATTGTTCTATAGACGATGATGATTTATCGAGTGTGCCGCATTGAAGATGGAGTTGATGATGATTTCGCTGCGCTGCCTTGAAGATGAAGATGATGATGGTTTCGCTGCACTGCTTTGAAGATGAAGATGATGATGAAGATCCTCTCGGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATTTGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATTTGTGAGATGAAGATGATGATGAAGATTCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCAGCTGCAACATATGTGAGAAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGACTGCAATATATGTGAGATGAAGATGATGATGAAGATCCTCTCAGCTGCAACATATGTGAGAAGATGAACATGCTGATGAAGATCCTCTCGGCTGCAACATATGTGAGAAGATGAAAATGATGGTGAAGATTCTCTAGGCTACAACATATGTGAGAAGATGAAAATGAGATGATGATCCTCTCGACTGCAACATATGTGAGAAGATGAAAATGATGATGATGATCCTCTCGGCTGCAACATATCTGAGAAGATGAAGATGATGATCCTCTCGGCTGCAACATATGTGAGAAGATGAAGATGATGATTTTCTCGGCTGTAACATTTGTGAGAAGATGAAGTTGATGATTTCCTCCGCTACAACACATTGAAGATGAAGATGATGATCCTCTCTGTTGCAACACATTGAAGATGATGATGATGGTGAAGATCCTCCAGCTGCAACATATTTGAAGGGACGACCTTCTCGACAGCAACATATTTGAGACGACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTCGGCTACAATATACTTGAGACAAAAATCTTTTGGCTGCAACATATTTGAGACGACAATCTTCTCGGTTGTAACATATTTGAGACGATGATCTTCTCTGCTTCAACATATTTAAGAACGGCAATCTTCTGAGCTGCAACATATTTTAGGGGACGACCTTCTCGACGATAATATATTTGAGACGACGACATCCTCGGCTGCAACATATATGAGACGACGACCTTTTTGGCTGCAACGTATTTGAGACGACAATCTTCTCGGTTGTAATATATTTGAGACGATGATCTTCTCTGTTACAACATATTTAAGAACGATAATCTTCTCAGCTGCAACATATTTGAGACGATGATCTTCTTGGTTGTAACATATTTGAGACGACGATCTTCTCAGCTGCAACATATTTAAGAACGACAATCTTCTCAGCTGCAACATATTTGAGGGGACAACCTCCTCGGCGACAACATATTTGAGACAACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTGGATTGCACGAGACAACGACATTCTCAGCTACAATATACTTGAGATAAAAATCTTTTTGGCTGCAACATATTTGAGACGACGATCTTCTCGGTTGTAACATATTTGAGACGATGATCTTCTCTGCTGCAACATATTTAAGAACAACAATCTTCTCAGCTGCAACATATTTGAGGGACGACCTTCTCGACGGCAACATATTTGAGACGACGACATCCTCGGCTACAATATATATGAGACGACGACTTTCTCGGCTACAATATACTTGAGACAAAAATCTTTTTGGCTGCAACATATTTGAGACGACGATCTTCTCGGTTGTAACATATTTGAGATGACGATCTTCTCAGCTGCAACATATTTAAGAACGACAATCTTCTCAGCTGCAACATATTTGAGGGGACGACCTTCTCGGCGGCAACATATTTGAGACGACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTCGGCTACAATATACTTGAGACAAAAATCTTTTTGGCTGCAACATATTTGAGATTATGAAGATGATGAAGATTCTCTCGGCTGCAACACATGGGAGAAGATGAAGATGAAGATCCTCTTGGGCACAACACATGGAAAGATCCTTGTCTGCAACATATCAAAGAGGAGTAGAGTTCGCTGGTCAACATTTTGGAGAAGAGGCGAAACCGCACCTTACGAAGGTAAACAATTAAACATCTCTGTTGTCACAAAAGAGGCCACAGAGGCGCTAGCTACGGTTCAAAAGAGCCTGAACGCTACACGCGAAGAATTTAAGAACTTCAAGTGGAGGCTTTAACTTTGCCCCCTTTGCCCCCA

mRNA sequence

TGGAGACGACGACGATTGTTCTATCGACTACACCGCATGGAGACGACGATGATTGTTCTATCGACTACACCGCATGGAGACGACGATGATTGTTCTATAGACGATGATGATTTATCGAGTGTGCCGCATTGAAGATGGAGTTGATGATGATTTCGCTGCGCTGCCTTGAAGATGAAGATGATGATGGTTTCGCTGCACTGCTTTGAAGATGAAGATGATGATGAAGATCCTCTCGGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATTTGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATTTGTGAGATGAAGATGATGATGAAGATTCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCAGCTGCAACATATGTGAGAAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGGCTGCAACATATGTGAGATGAAGATGATGATGAAGATCCTCTCGACTGCAATATATGTGAGATGAAGATGATGATGAAGATCCTCTCAGCTGCAACATATGTGAGAAGATGAACATGCTGATGAAGATCCTCTCGGCTGCAACATATGTGAGAAGATGAAAATGATGGTGAAGATTCTCTAGGCTACAACATATGTGAGAAGATGAAAATGAGATGATGATCCTCTCGACTGCAACATATGTGAGAAGATGAAAATGATGATGATGATCCTCTCGGCTGCAACATATCTGAGAAGATGAAGATGATGATCCTCTCGGCTGCAACATATGTGAGAAGATGAAGATGATGATTTTCTCGGCTGTAACATTTGTGAGAAGATGAAGTTGATGATTTCCTCCGCTACAACACATTGAAGATGAAGATGATGATCCTCTCTGTTGCAACACATTGAAGATGATGATGATGGTGAAGATCCTCCAGCTGCAACATATTTGAAGGGACGACCTTCTCGACAGCAACATATTTGAGACGACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTCGGCTACAATATACTTGAGACAAAAATCTTTTGGCTGCAACATATTTGAGACGACAATCTTCTCGGTTGTAACATATTTGAGACGATGATCTTCTCTGCTTCAACATATTTAAGAACGGCAATCTTCTGAGCTGCAACATATTTTAGGGGACGACCTTCTCGACGATAATATATTTGAGACGACGACATCCTCGGCTGCAACATATATGAGACGACGACCTTTTTGGCTGCAACGTATTTGAGACGACAATCTTCTCGGTTGTAATATATTTGAGACGATGATCTTCTCTGTTACAACATATTTAAGAACGATAATCTTCTCAGCTGCAACATATTTGAGACGATGATCTTCTTGGTTGTAACATATTTGAGACGACGATCTTCTCAGCTGCAACATATTTAAGAACGACAATCTTCTCAGCTGCAACATATTTGAGGGGACAACCTCCTCGGCGACAACATATTTGAGACAACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTGGATTGCACGAGACAACGACATTCTCAGCTACAATATACTTGAGATAAAAATCTTTTTGGCTGCAACATATTTGAGACGACGATCTTCTCGGTTGTAACATATTTGAGACGATGATCTTCTCTGCTGCAACATATTTAAGAACAACAATCTTCTCAGCTGCAACATATTTGAGGGACGACCTTCTCGACGGCAACATATTTGAGACGACGACATCCTCGGCTACAATATATATGAGACGACGACTTTCTCGGCTACAATATACTTGAGACAAAAATCTTTTTGGCTGCAACATATTTGAGACGACGATCTTCTCGGTTGTAACATATTTGAGATGACGATCTTCTCAGCTGCAACATATTTAAGAACGACAATCTTCTCAGCTGCAACATATTTGAGGGGACGACCTTCTCGGCGGCAACATATTTGAGACGACGACATCCTCGGCTGCAATATATATGAGACGACGACTTTCTCGGCTACAATATACTTGAGACAAAAATCTTTTTGGCTGCAACATATTTGAGATTATGAAGATGATGAAGATTCTCTCGGCTGCAACACATGGGAGAAGATGAAGATGAAGATCCTCTTGGGCACAACACATGGAAAGATCCTTGTCTGCAACATATCAAAGAGGAGTAGAGTTCGCTGGTCAACATTTTGGAGAAGAGGCGAAACCGCACCTTACGAAGGTAAACAATTAAACATCTCTGTTGTCACAAAAGAGGCCACAGAGGCGCTAGCTACGGTTCAAAAGAGCCTGAACGCTACACGCGAAGAATTTAAGAACTTCAAGTGGAGGCTTTAACTTTGCCCCCTTTGCCCCCA

Coding sequence (CDS)

ATGAAGATGAAGATCCTCTTGGGCACAACACATGGAAAGATCCTTGTCTGCAACATATCAAAGAGGAGTAGAGTTCGCTGGTCAACATTTTGGAGAAGAGGCGAAACCGCACCTTACGAAGGTAAACAATTAAACATCTCTGTTGTCACAAAAGAGGCCACAGAGGCGCTAGCTACGGTTCAAAAGAGCCTGAACGCTACACGCGAAGAATTTAAGAACTTCAAGTGGAGGCTTTAA

Protein sequence

MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATVQKSLNATREEFKNFKWRL

Homology

[Close]

BLAST of Cmc07g0200621 vs. NCBI nr
Match: KAA0065326.1 (hypothetical protein E6C27_scaffold10081G00020 [Cucumis melo var. makuwa] >TYK14889.1 hypothetical protein E5676_scaffold2047G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 2.7e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV
Sbjct: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSLNATREEFKNFKWRL
Sbjct: 61 QKSLNATREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. NCBI nr
Match: KAA0025515.1 (hypothetical protein E6C27_scaffold19132G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 7.8e-35
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILLGTTHGKILVCNISKRSRVRWS+FWRRGETAPYEGKQLNISVVTKEATEALATV
Sbjct: 1  MKMKILLGTTHGKILVCNISKRSRVRWSSFWRRGETAPYEGKQLNISVVTKEATEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSLNATREEFKNFKWRL
Sbjct: 61 QKSLNATREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. NCBI nr
Match: KAA0065302.1 (hypothetical protein E6C27_scaffold1023G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEG+QLNISVVTKE TEALATV
Sbjct: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGRQLNISVVTKEGTEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSLNA REEFKNFKWRL
Sbjct: 61 QKSLNAGREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. NCBI nr
Match: KAA0059025.1 (hypothetical protein E6C27_scaffold233G00460 [Cucumis melo var. makuwa] >KAA0060504.1 hypothetical protein E6C27_scaffold22G003510 [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILL  T+GKILVCNISKRSRVRWSTFWRRGETAPYEG+QLNISVVTKEATEALATV
Sbjct: 1  MKMKILLAATNGKILVCNISKRSRVRWSTFWRRGETAPYEGRQLNISVVTKEATEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSL+A REEFKNFKWRL
Sbjct: 61 QKSLDAAREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. NCBI nr
Match: KAA0032651.1 (hypothetical protein E6C27_scaffold184G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 10 THGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATVQKSLNATRE 69
          T+GKILVCNISKRSRVRWSTFWRRGETAPYEG+QLNISVVTKEATEALA VQKS++A RE
Sbjct: 20 TNGKILVCNISKRSRVRWSTFWRRGETAPYEGRQLNISVVTKEATEALAMVQKSMDAARE 79

Query: 70 EFKNFKWRL 79
          EFKNFKWRL
Sbjct: 80 EFKNFKWRL 88

[Close]

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL
Match: A0A5D3CXF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2047G00210 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV
Sbjct: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSLNATREEFKNFKWRL
Sbjct: 61 QKSLNATREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL
Match: A0A5A7SM33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19132G00020 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.8e-35
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILLGTTHGKILVCNISKRSRVRWS+FWRRGETAPYEGKQLNISVVTKEATEALATV
Sbjct: 1  MKMKILLGTTHGKILVCNISKRSRVRWSSFWRRGETAPYEGKQLNISVVTKEATEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSLNATREEFKNFKWRL
Sbjct: 61 QKSLNATREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL
Match: A0A5A7VAG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00180 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-34
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEG+QLNISVVTKE TEALATV
Sbjct: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGRQLNISVVTKEGTEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSLNA REEFKNFKWRL
Sbjct: 61 QKSLNAGREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL
Match: A0A5A7UZL0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G003510 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-32
Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MKMKILLGTTHGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATV 60
          MKMKILL  T+GKILVCNISKRSRVRWSTFWRRGETAPYEG+QLNISVVTKEATEALATV
Sbjct: 1  MKMKILLAATNGKILVCNISKRSRVRWSTFWRRGETAPYEGRQLNISVVTKEATEALATV 60

Query: 61 QKSLNATREEFKNFKWRL 79
          QKSL+A REEFKNFKWRL
Sbjct: 61 QKSLDAAREEFKNFKWRL 78

[Close]

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL
Match: A0A5A7ST22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00360 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 10 THGKILVCNISKRSRVRWSTFWRRGETAPYEGKQLNISVVTKEATEALATVQKSLNATRE 69
          T+GKILVCNISKRSRVRWSTFWRRGETAPYEG+QLNISVVTKEATEALA VQKS++A RE
Sbjct: 20 TNGKILVCNISKRSRVRWSTFWRRGETAPYEGRQLNISVVTKEATEALAMVQKSMDAARE 79

Query: 70 EFKNFKWRL 79
          EFKNFKWRL
Sbjct: 80 EFKNFKWRL 88

The following BLAST results are available for this feature:

BLAST of Cmc07g0200621 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065326.1	2.7e-35	100.00	hypothetical protein E6C27_scaffold10081G00020 [Cucumis melo var. makuwa] >TYK14...	[more]
KAA0025515.1	7.8e-35	98.72	hypothetical protein E6C27_scaffold19132G00020 [Cucumis melo var. makuwa]	[more]
KAA0065302.1	1.1e-33	96.15	hypothetical protein E6C27_scaffold1023G00180 [Cucumis melo var. makuwa]	[more]
KAA0059025.1	1.1e-31	92.31	hypothetical protein E6C27_scaffold233G00460 [Cucumis melo var. makuwa] >KAA0060...	[more]
KAA0032651.1	2.7e-27	91.30	hypothetical protein E6C27_scaffold184G00360 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0200621 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXF3	1.3e-35	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SM33	3.8e-35	98.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VAG4	5.5e-34	96.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UZL0	5.1e-32	92.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7ST22	1.3e-27	91.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cmc07g0200621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0200621.1	Cmc07g0200621.1	mRNA