Cmc07g0199621 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0199621
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 22481799 .. 22483503 (+)
RNA-Seq ExpressionCmc07g0199621
SyntenyCmc07g0199621
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGGAAATATTTAAAACTAGAAATATGAGAATTTCTTCTTTAATATTTTTTACCTAAAAATCATTAAAAAAGAATGATTTAATTTTTAATAGTTTATGAGAAAAAAGTTCAGAATTTTCATAGTCAAACAACATTACTCAAATCTTCTTAACACTCGAATTCAACATTTGATCAAACAGAAAGAGACAAAATAGGAGTCAAATATTTAAAGATCATAAAATTAGGAAATGGAAGAAAAGTCCTTGTAATCAATCATCCACAATCTCTATCATTTGCAATCCCCAAGCGGTGCTCCACACAAACACTTATTATGAAAGTAAGAATACAAATCAAAGCTTTGCAAATTCCCACCCACCGGAATCGGTCCACAAAGTCGATTATAACTAACATTCAGATATTGCAATTTCAGTTCCGTCATCACCGGCGGCAAACCCCCAAACACCTTATTATGATTAAGATCCAACGAAGTCAAACTCTGAGGAAACACTACCTCCGACAAATTAAACTCCAACAAGTTCCTCGACAAATCAAGAATCTGAATCGTCTTGTTGGCGCCGAAGAACATAAACGCGTCGCCTTCAAGTTTGTTACGGGACAGATCAATGGAAGTGAAATTCAATCTCGACAAAGAAGAAGGGATTTTGCCAGAAAGTTGATTGTGTGAGAGAATCAAATCCGGGGCTTGTTCTCCGGCGAAATAGCCGAAGGAGTCAGGGATTTGTCCTGTTAATTGGTTCCGATCCAACCGGAGACCGCCCAAGCTAGGGAGTTCAGAGAGGGAACTTGGGATTTTTCCGGTGAGTTTGTTGAATGAGAGAGTAAGAATGAAGAGATTTTTTAGAGTGCTTAAGGAATCTGGGATTTCGCCGGAGAGACCGTTCCAGCTGAGGTCGAGAAATTTGAGGTTATGGAGTTTGGCTATGGTGGGTTGGATGGGGCCGGTGAGATTTGGGAGCTTGTGGAGCATAAGGGTTTGTAGGAATGGAAGGTCGCCGACTTCGGGTGGGATTTGGCCGGTGAGACGGTCGTCGGCGAAGATGGTGAGGGAGATGATTCGATGGGTAGTTCGATCGCATTTGACACAGTACCAATGGCAGCAATCTGTTTGTGGGTCCCAAGAGGTGAGAATGTAGGGATTGTTGAAGGCTTTTTTGATTTTTAGAAGCACTTTTTTGTCATTTGGATTGCAAAGCTCCGCAAAGGAAATGGTAATGAAGAAGAAGAAGAAGAAAGGGAGCCATGAGAGTTTGTTGAGATTTGAAGCCATGGATTTGGATTTGGATTTGAGTGAGTAATTGTGGAGAGATTATATTTGGTCTGGATTGATTTATAAAGGTGAATGTGAGGAAGGGGTTTTGTGTGTGAATGTGCTTAATAGTGTTTTTTATGAGTGGAAGACAAAGAGTTCAATTATTAGCTCATGAAGATATGCATCGAATAAGGTATAGACTTCAAAGTCAAACAATAGAGACGCTTGGTTTGGATTTGGGTTTCTATACTTTTAATATAGGTTGAAGAGATATATCATCATTCATGATCTCAGCATTACCATTGATGAAATTAAGGAGCAATTGCATTAGATAACATTCTTACGGATAATAATTAATTTATTGTATAACCATTTTTATAAACACGGTGAATATAAGATACCAATAGATTCTACGATGGACTTCGAAAATGAAATTAAATTTTTTGTCATATAT

mRNA sequence

GTAAGGAAATATTTAAAACTAGAAATATGAGAATTTCTTCTTTAATATTTTTTACCTAAAAATCATTAAAAAAGAATGATTTAATTTTTAATAGTTTATGAGAAAAAAGTTCAGAATTTTCATAGTCAAACAACATTACTCAAATCTTCTTAACACTCGAATTCAACATTTGATCAAACAGAAAGAGACAAAATAGGAGTCAAATATTTAAAGATCATAAAATTAGGAAATGGAAGAAAAGTCCTTGTAATCAATCATCCACAATCTCTATCATTTGCAATCCCCAAGCGGTGCTCCACACAAACACTTATTATGAAAGTAAGAATACAAATCAAAGCTTTGCAAATTCCCACCCACCGGAATCGGTCCACAAAGTCGATTATAACTAACATTCAGATATTGCAATTTCAGTTCCGTCATCACCGGCGGCAAACCCCCAAACACCTTATTATGATTAAGATCCAACGAAGTCAAACTCTGAGGAAACACTACCTCCGACAAATTAAACTCCAACAAGTTCCTCGACAAATCAAGAATCTGAATCGTCTTGTTGGCGCCGAAGAACATAAACGCGTCGCCTTCAAGTTTGTTACGGGACAGATCAATGGAAGTGAAATTCAATCTCGACAAAGAAGAAGGGATTTTGCCAGAAAGTTGATTGTGTGAGAGAATCAAATCCGGGGCTTGTTCTCCGGCGAAATAGCCGAAGGAGTCAGGGATTTGTCCTGTTAATTGGTTCCGATCCAACCGGAGACCGCCCAAGCTAGGGAGTTCAGAGAGGGAACTTGGGATTTTTCCGGTGAGTTTGTTGAATGAGAGAGTAAGAATGAAGAGATTTTTTAGAGTGCTTAAGGAATCTGGGATTTCGCCGGAGAGACCGTTCCAGCTGAGGTCGAGAAATTTGAGGTTATGGAGTTTGGCTATGGTGGGTTGGATGGGGCCGGTGAGATTTGGGAGCTTGTGGAGCATAAGGGTTTGTAGGAATGGAAGGTCGCCGACTTCGGGTGGGATTTGGCCGGTGAGACGGTCGTCGGCGAAGATGGTGAGGGAGATGATTCGATGGGTAGTTCGATCGCATTTGACACAGTACCAATGGCAGCAATCTGTTTGTGGGTCCCAAGAGGTGAGAATGTAGGGATTGTTGAAGGCTTTTTTGATTTTTAGAAGCACTTTTTTGTCATTTGGATTGCAAAGCTCCGCAAAGGAAATGGTAATGAAGAAGAAGAAGAAGAAAGGGAGCCATGAGAGTTTGTTGAGATTTGAAGCCATGGATTTGGATTTGGATTTGAGTGAGTAATTGTGGAGAGATTATATTTGGTCTGGATTGATTTATAAAGGTGAATGTGAGGAAGGGGTTTTGTGTGTGAATGTGCTTAATAGTGTTTTTTATGAGTGGAAGACAAAGAGTTCAATTATTAGCTCATGAAGATATGCATCGAATAAGGTATAGACTTCAAAGTCAAACAATAGAGACGCTTGGTTTGGATTTGGGTTTCTATACTTTTAATATAGGTTGAAGAGATATATCATCATTCATGATCTCAGCATTACCATTGATGAAATTAAGGAGCAATTGCATTAGATAACATTCTTACGGATAATAATTAATTTATTGTATAACCATTTTTATAAACACGGTGAATATAAGATACCAATAGATTCTACGATGGACTTCGAAAATGAAATTAAATTTTTTGTCATATAT

Coding sequence (CDS)

ATGAAAGTAAGAATACAAATCAAAGCTTTGCAAATTCCCACCCACCGGAATCGGTCCACAAAGTCGATTATAACTAACATTCAGATATTGCAATTTCAGTTCCGTCATCACCGGCGGCAAACCCCCAAACACCTTATTATGATTAAGATCCAACGAAGTCAAACTCTGAGGAAACACTACCTCCGACAAATTAAACTCCAACAAGTTCCTCGACAAATCAAGAATCTGAATCGTCTTGTTGGCGCCGAAGAACATAAACGCGTCGCCTTCAAGTTTGTTACGGGACAGATCAATGGAAGTGAAATTCAATCTCGACAAAGAAGAAGGGATTTTGCCAGAAAGTTGATTGTGTGA

Protein sequence

MKVRIQIKALQIPTHRNRSTKSIITNIQILQFQFRHHRRQTPKHLIMIKIQRSQTLRKHYLRQIKLQQVPRQIKNLNRLVGAEEHKRVAFKFVTGQINGSEIQSRQRRRDFARKLIV
Homology
[Close]
BLAST of Cmc07g0199621 vs. NCBI nr
Match: KAF4370742.1 (hypothetical protein F8388_025121 [Cannabis sativa])

HSP 1 Score: 67.8 bits (164), Expect = 7.2e-08
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 0 

Query: 1  MKVRIQIKALQIPTHRNRSTKSIITNIQILQ-FQFRHHRRQTPKHLIMIKIQRSQTLRKH 60
          M++R  ++ALQIPTHRN   + II +I+  Q  Q     R+TP +LIMIKIQR Q L K 
Sbjct: 1  MEIRRVLEALQIPTHRNFPAQPIIAHIETAQIIQCGQSHRKTPNYLIMIKIQRGQALGKL 60

Query: 61 YLRQIKLQQVPRQIKNLN 78
           LR IKLQQ+PRQ+  L+
Sbjct: 61 NLRHIKLQQIPRQVYKLD 78

[Close]
BLAST of Cmc07g0199621 vs. NCBI nr
Match: RDY01619.1 (hypothetical protein CR513_15033, partial [Mucuna pruriens])

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 6  QIKALQIPTHRNRSTKSIITNIQILQ-FQFRHHRRQTPKHLIMIKIQRSQTLRKHYLRQI 65
          +IK LQ PT R  +T+ II ++++LQ  Q        P +L++I+IQR Q L + +  +I
Sbjct: 3  KIKLLQSPTLRYLTTQPIIAHVELLQKIQCGQAHGNAPGYLVVIQIQRCQALGELHFGKI 62

Query: 66 KLQQVPRQIKNLNRLVGAEEHKRVAFKFV 94
          K QQVPR +K+L R VG E+H  +AF+FV
Sbjct: 63 KCQQVPRNVKHLRRFVGPEKHGGIAFQFV 91

[Close]
BLAST of Cmc07g0199621 vs. ExPASy TrEMBL
Match: A0A803R9W0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 1  MKVRIQIKALQIPTHRNRSTKSIITNIQILQ-FQFRHHRRQTPKHLIMIKIQRSQTLRKH 60
          M++R  ++ALQIPTHRN  T+ II +I+  Q  Q     R+TP +LIMIKIQR Q L K 
Sbjct: 1  MEIRRVLEALQIPTHRNLPTQPIIAHIETAQIIQCGQSHRKTPNYLIMIKIQRGQALGKL 60

Query: 61 YLRQIKLQQVPRQIKNLNRLVGAE 84
           LR IKLQQ+PRQ+  L+  + +E
Sbjct: 61 NLRHIKLQQIPRQVYKLDSFIRSE 84

[Close]
BLAST of Cmc07g0199621 vs. ExPASy TrEMBL
Match: A0A7J6FJ51 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_025121 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-08
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 0 

Query: 1  MKVRIQIKALQIPTHRNRSTKSIITNIQILQ-FQFRHHRRQTPKHLIMIKIQRSQTLRKH 60
          M++R  ++ALQIPTHRN   + II +I+  Q  Q     R+TP +LIMIKIQR Q L K 
Sbjct: 1  MEIRRVLEALQIPTHRNFPAQPIIAHIETAQIIQCGQSHRKTPNYLIMIKIQRGQALGKL 60

Query: 61 YLRQIKLQQVPRQIKNLN 78
           LR IKLQQ+PRQ+  L+
Sbjct: 61 NLRHIKLQQIPRQVYKLD 78

[Close]
BLAST of Cmc07g0199621 vs. ExPASy TrEMBL
Match: A0A371HFR7 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_15033 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 6  QIKALQIPTHRNRSTKSIITNIQILQ-FQFRHHRRQTPKHLIMIKIQRSQTLRKHYLRQI 65
          +IK LQ PT R  +T+ II ++++LQ  Q        P +L++I+IQR Q L + +  +I
Sbjct: 3  KIKLLQSPTLRYLTTQPIIAHVELLQKIQCGQAHGNAPGYLVVIQIQRCQALGELHFGKI 62

Query: 66 KLQQVPRQIKNLNRLVGAEEHKRVAFKFV 94
          K QQVPR +K+L R VG E+H  +AF+FV
Sbjct: 63 KCQQVPRNVKHLRRFVGPEKHGGIAFQFV 91

The following BLAST results are available for this feature:
BLAST of Cmc07g0199621 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF4370742.17.2e-0852.56hypothetical protein F8388_025121 [Cannabis sativa][more]
RDY01619.12.7e-0743.82hypothetical protein CR513_15033, partial [Mucuna pruriens][more]
BLAST of Cmc07g0199621 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc07g0199621 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A803R9W01.4e-0951.19Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7J6FJ513.5e-0852.56Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_025121 PE=4 SV=1[more]
A0A371HFR71.3e-0743.82Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_15033 P... [more]
BLAST of Cmc07g0199621 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0199621.1Cmc07g0199621.1mRNA