Cmc07g0196251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	MuDRA-like transposase
Location	CMiso1.1chr07: 19639206 .. 19640998 (-)
RNA-Seq Expression	Cmc07g0196251
Synteny	Cmc07g0196251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTAATATGATTGGCATAAAGCAAAAATAGAGAGAGTTAGAGAGTCGTAATAAACATTAAAGATGAAAGTTTATGGTATGATTCTGTTAGGTTGTAGTCCTGTATTATCCAGTTTGGTGATTTTATGTTGTCTTTATATTTGTGGAATTCATCAAAAGATGAAAAAAACAACTAAGCGGCTCTCCACATATCCTGATCTCAAAATCGGACAACCCTCTGACCAAACCAACCATGGTGGAATCCTTATTGTGGCTAATACAGCTGTGACCACCACAGACGATGGATGTACTGGCGGTGACTGTGGCGGCGATTGTGGTTGTGACGATTGATTTTGACAAATCACATCAGCAGTACAAACAACCTTCTTTGCTCATGAGTAGTGTTTTGAAGTCCCCTCCAAGTTAGTTATCATTTCCTTGGATCAGTTTAGCATAAATTTCAGCATGCAACCTACTTGTTTCTTGTTTTTTTTTTGTTTCTATCTTACTACTAGTTGAAAGATAAGTTTAAAATTTAAAATTTGAGTGGATATTTATTGGTAAATGTTTGATAATATATGGAGTAATCGGAGAAATAGTTCTTAAAACTATATATTTCTTATTTTAAGTTATTTTTAGGATGAATGTTTGAAAGACATGTATGTATGTGTATATATATAATTTTCAGAGAATAATAATTGTGATATATAGTTCGAATAACAAACACGCTGTTTGCACACTAGATTCAAAAGCAAAGATATATAAAGACAATTATCTTTATTGGTATATTCAAAAGTGAACAATATTGGGAAATTGCCAAAAATAGCTTAAAAAAGGAGGGTTAAATGACTTTTGGGATAGTTTTTGAAAATAAAGAGTTTTAGGACAATTTATGTGTGAATGGACAAAAATGTCCTTCATTAAATTTCTCCTTCTCCTTCCCTTTCCCTTTCCCTTCTCTTCCACGTAAAAGCTTTCAGCTTTCGCTTTCCCTTCTCTTTCGCGTAGAGTTGTTTCCTTTTCCCTTCTCTTTTGTGTAGAACACCTGAAGTAAAAAAAAAAAAAAATCGCTCTGCTCCGATACTTTGCTCTGCTCTAGTGTCGTTCGAAGATACTCCGACCATTCGTCTCTTGCCATTCGTCGATCCTCTAGTGCATTTCGTCGCTCCTTCTTTTCAAACCATTCAATCAACTTTGAGCGTTTTCTTTTATTTTAGTGAGTTTCATCTCTAACTCATTTTTAATTTATTTGCTGTAAATATTTGGTTTAGGTATTTGTTGCGAGTTTCATCCGTAAATGTCTGGTTTAGGCTATTTTGGAATGGAATTATTTGCTGTAAATTAGTTTAGTCAAAGTTTGGTTTAGGTTCTTAAAAAGTTCAATGGGTAGTGAAAAATGAATTGAAGTAAAAGATTTAGTTTGCAAGAGTGCACTTGCAAGGAGTTTCAAGCTGAGCAACTACCATGCTCACATGCCATTGCTGCAGCACGAGATCGCAATATAAATGTTTATAGATTATGTGCTAATTATTACACCAATGAATGTTTGTTGGCAGCATATGCGGAGACCGTCTACCTAATTGTAAATCAGTCAGCTTGGAAGACAAGCGAAGACTATCTACATATGATTGTTTTACCTCCGAAAGTAGTCAAAAGAGTTGGTCGACTGAAGAAAAAAAGGATTCCAAGTGTTGGTGAAGCTCCGAAATTGCATAAGTGTGGTCGATGTAAAGAAATAGGTCACAACAGATTAACGTGTACCAATACAATTTCATATACCGAGAAGTCCAGCATACAAATTTAAAAATTTCT

mRNA sequence

CAAATTAATATGATTGGCATAAAGCAAAAATAGAGAGAGTTAGAGAGTCGTAATAAACATTAAAGATGAAAGTTTATGGTATGATTCTGTTAGGTTGTAGTCCTGTATTATCCAGTTTGGTGATTTTATGTTGTCTTTATATTTGTGGAATTCATCAAAAGATGAAAAAAACAACTAAGCGGCTCTCCACATATCCTGATCTCAAAATCGGACAACCCTCTGACCAAACCAACCATGGTGGAATCCTTATTGTGGCTAATACAGCTGTGACCACCACAGACGATGGATGTACTGGCGGTGACTGTGGCGGCGATTGTGGTTGTGACGATTGATTTTGACAAATCACATCAGCAGTACAAACAACCTTCTTTGCTCATGAGTAGTGTTTTGAAGTCCCCTCCAACATATGCGGAGACCGTCTACCTAATTGTAAATCAGTCAGCTTGGAAGACAAGCGAAGACTATCTACATATGATTGTTTTACCTCCGAAAGTAGTCAAAAGAGTTGGTCGACTGAAGAAAAAAAGGATTCCAAGTGTTGGTGAAGCTCCGAAATTGCATAAGTGTGGTCGATGTAAAGAAATAGGTCACAACAGATTAACGTGTACCAATACAATTTCATATACCGAGAAGTCCAGCATACAAATTTAAAAATTTCT

Coding sequence (CDS)

ATGGATGTACTGGCGGTGACTGTGGCGGCGATTGTGGTTGTGACGATTGATTTTGACAAATCACATCAGCAGTACAAACAACCTTCTTTGCTCATGAGTAGTGTTTTGAAGTCCCCTCCAACATATGCGGAGACCGTCTACCTAATTGTAAATCAGTCAGCTTGGAAGACAAGCGAAGACTATCTACATATGATTGTTTTACCTCCGAAAGTAGTCAAAAGAGTTGGTCGACTGAAGAAAAAAAGGATTCCAAGTGTTGGTGAAGCTCCGAAATTGCATAAGTGTGGTCGATGTAAAGAAATAGGTCACAACAGATTAACGTGTACCAATACAATTTCATATACCGAGAAGTCCAGCATACAAATTTAA

Protein sequence

MDVLAVTVAAIVVVTIDFDKSHQQYKQPSLLMSSVLKSPPTYAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEIGHNRLTCTNTISYTEKSSIQI

Homology

[Close]

BLAST of Cmc07g0196251 vs. NCBI nr
Match: TYK11130.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VYL+ NQS WKTSEDY+HMIVLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCKEI
Sbjct: 81  YAEAVYLVGNQSDWKTSEDYVHMIVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKEI 140

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GH+RLTCTNTISYTEKSSIQ
Sbjct: 141 GHSRLTCTNTISYTEKSSIQ 160

[Close]

BLAST of Cmc07g0196251 vs. NCBI nr
Match: KAA0045547.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-32
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VYL+ NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 226 YAEAVYLVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 285

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTCTN ISYT+KSSIQ
Sbjct: 286 GHNRLTCTNPISYTDKSSIQ 305

[Close]

BLAST of Cmc07g0196251 vs. NCBI nr
Match: KAA0050049.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VYL+ NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 72  YAEAVYLVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 131

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTC N ISYT+KSSIQ
Sbjct: 132 GHNRLTCINPISYTDKSSIQ 151

[Close]

BLAST of Cmc07g0196251 vs. NCBI nr
Match: KAA0035833.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VY + NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 727 YAEAVYPVGNQSDWKTSEDYIHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 786

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTCTN ISYT+KSSIQ
Sbjct: 787 GHNRLTCTNPISYTDKSSIQ 806

[Close]

BLAST of Cmc07g0196251 vs. NCBI nr
Match: TYK27211.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 2.2e-31
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VY + NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 727 YAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 786

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTCTN ISYT+KSSIQ
Sbjct: 787 GHNRLTCTNPISYTDKSSIQ 806

[Close]

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL
Match: A0A5D3CIE4 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00360 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.6e-34
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VYL+ NQS WKTSEDY+HMIVLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCKEI
Sbjct: 81  YAEAVYLVGNQSDWKTSEDYVHMIVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKEI 140

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GH+RLTCTNTISYTEKSSIQ
Sbjct: 141 GHSRLTCTNTISYTEKSSIQ 160

[Close]

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL
Match: A0A5A7TUP6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00420 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32
Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VYL+ NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 226 YAEAVYLVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 285

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTCTN ISYT+KSSIQ
Sbjct: 286 GHNRLTCTNPISYTDKSSIQ 305

[Close]

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL
Match: A0A5A7SYY7 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G001340 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.0e-32
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VY + NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 727 YAEAVYPVGNQSDWKTSEDYIHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 786

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTCTN ISYT+KSSIQ
Sbjct: 787 GHNRLTCTNPISYTDKSSIQ 806

[Close]

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL
Match: A0A5A7U983 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00290 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.0e-32
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VYL+ NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 72  YAEAVYLVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 131

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTC N ISYT+KSSIQ
Sbjct: 132 GHNRLTCINPISYTDKSSIQ 151

[Close]

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL
Match: Q5GIT1 (MuDRA transposase-like OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 42  YAETVYLIVNQSAWKTSEDYLHMIVLPPKVVKRVGRLKKKRIPSVGEAPKLHKCGRCKEI 101
           YAE VY + NQS WKTSEDY+HM VLPPKVVKRVGR KKKRIPSVGEAPKLHKCGRCK+I
Sbjct: 727 YAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRIPSVGEAPKLHKCGRCKQI 786

Query: 102 GHNRLTCTNTISYTEKSSIQ 122
           GHNRLTCTN ISYT+KSSIQ
Sbjct: 787 GHNRLTCTNPISYTDKSSIQ 806

The following BLAST results are available for this feature:

BLAST of Cmc07g0196251 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11130.1	1.4e-33	91.25	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
KAA0045547.1	3.3e-32	87.50	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
KAA0050049.1	1.7e-31	86.25	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
KAA0035833.1	1.7e-31	86.25	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
TYK27211.1	2.2e-31	86.25	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0196251 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIE4	6.6e-34	91.25	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A5A7TUP6	1.6e-32	87.50	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A5A7SYY7	8.0e-32	86.25	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4...	[more]
A0A5A7U983	8.0e-32	86.25	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
Q5GIT1	1.0e-31	86.25	MuDRA transposase-like OS=Cucumis melo OX=3656 PE=4 SV=1	[more]

BLAST of Cmc07g0196251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0196251.1	Cmc07g0196251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding