Cmc07g0196031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0196031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Location	CMiso1.1chr07: 19445942 .. 19446472 (-)
RNA-Seq Expression	Cmc07g0196031
Synteny	Cmc07g0196031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTGACGGTTGATAATGCAAGTTCGAATGACACTGCTGTTGCTTATCTTTTAAAGAGATTCAATAAAGGATTATTGTTTAGTGAGGAATTTCTGCATGTTCGTTGTTGTGGCCATATATTGAATCTTATAGTAACTGATGCTTTTAAGGAACATAATGATTGTATTGATAGGATTCGATATGCCGTGCGATTTATAAGGTCTTCTCCTACTCGTTTTTTGAAATATAAAAAGTGCATTGAACTTGAAAAAATTGATTGTAAGAGTTATGTGTGTCTTGATGTTCCCACAAGATGGAACTCCACATATATGAGGCTTGAAGCTGCTGTTAAGTTTGAAAAAGCTTTTGGTAGATTAGAAGATGAAGATGCCTCGTATAGACATGATATGTCACCGAATAAGGAAGATTGGACAAATGCTAGGATGTTAATACGGTTTTTAAAAGTATTTTATGATGTGACATTGAAGATTTCAGGCTCTTTGTATACTACTTCGAACTTGGTTTTCCATCAAATTACAGTGGTTTAG

mRNA sequence

ATGACTTTGACGGTTGATAATGCAAGTTCGAATGACACTGCTGTTGCTTATCTTTTAAAGAGATTCAATAAAGGATTATTGTTTAGTGAGGAATTTCTGCATGTTCGTTGTTGTGGCCATATATTGAATCTTATAGTAACTGATGCTTTTAAGGAACATAATGATTGTATTGATAGGATTCGATATGCCGTGCGATTTATAAGGTCTTCTCCTACTCGTTTTTTGAAATATAAAAAGTGCATTGAACTTGAAAAAATTGATTGTAAGAGTTATGTGTGTCTTGATGTTCCCACAAGATGGAACTCCACATATATGAGGCTTGAAGCTGCTGTTAAGTTTGAAAAAGCTTTTGGTAGATTAGAAGATGAAGATGCCTCGTATAGACATGATATGTCACCGAATAAGGAAGATTGGACAAATGCTAGGATGTTAATACGGTTTTTAAAAGTATTTTATGATGTGACATTGAAGATTTCAGGCTCTTTGTATACTACTTCGAACTTGGTTTTCCATCAAATTACAGTGGTTTAG

Coding sequence (CDS)

ATGACTTTGACGGTTGATAATGCAAGTTCGAATGACACTGCTGTTGCTTATCTTTTAAAGAGATTCAATAAAGGATTATTGTTTAGTGAGGAATTTCTGCATGTTCGTTGTTGTGGCCATATATTGAATCTTATAGTAACTGATGCTTTTAAGGAACATAATGATTGTATTGATAGGATTCGATATGCCGTGCGATTTATAAGGTCTTCTCCTACTCGTTTTTTGAAATATAAAAAGTGCATTGAACTTGAAAAAATTGATTGTAAGAGTTATGTGTGTCTTGATGTTCCCACAAGATGGAACTCCACATATATGAGGCTTGAAGCTGCTGTTAAGTTTGAAAAAGCTTTTGGTAGATTAGAAGATGAAGATGCCTCGTATAGACATGATATGTCACCGAATAAGGAAGATTGGACAAATGCTAGGATGTTAATACGGTTTTTAAAAGTATTTTATGATGTGACATTGAAGATTTCAGGCTCTTTGTATACTACTTCGAACTTGGTTTTCCATCAAATTACAGTGGTTTAG

Protein sequence

MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRIRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRLEDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV

Homology

[Close]

BLAST of Cmc07g0196031 vs. NCBI nr
Match: TYK28895.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 73  MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 132

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 133 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 192

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 193 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 248

[Close]

BLAST of Cmc07g0196031 vs. NCBI nr
Match: TYK12117.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 253 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 312

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 313 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 372

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 373 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 428

[Close]

BLAST of Cmc07g0196031 vs. NCBI nr
Match: TYK23433.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 97  MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 156

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 157 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 216

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 217 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 272

[Close]

BLAST of Cmc07g0196031 vs. NCBI nr
Match: TYK14363.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 280 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 339

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 340 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 399

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 400 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 455

[Close]

BLAST of Cmc07g0196031 vs. NCBI nr
Match: TYK20578.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 215 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 274

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 275 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 334

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 335 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 390

[Close]

BLAST of Cmc07g0196031 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-23
Identity = 61/171 (35.67%), Postives = 95/171 (55.56%), Query Frame = 0


Query: 3   LTVDNASSNDTAVAYL---LKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDR 62
           L++DNAS+N+ AV  +   L+  +  L+    F HVRC  HILNL+  D        I++
Sbjct: 364 LSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEK 423

Query: 63  IRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGR 122
           I+  V  ++SSP ++ +  KC     +D    +  DV TRWNSTY+ L  A+ ++ A  R
Sbjct: 424 IKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIR 483

Query: 123 LEDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVF 171
           L+  D      + P  E+W  A  L + LK F+D+T  +SG+ Y+T+NL +
Sbjct: 484 LKTSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFY 534

[Close]

BLAST of Cmc07g0196031 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-22
Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 2   TLTVDN-ASSNDTAVA----YLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDC 61
           T+T+DN  SS+D   A    YL  + N  L+   +   VRC  HILN +  D     +  
Sbjct: 303 TITLDNDCSSHDIYSANLRDYLSNKNN--LMLKGQLFVVRCYAHILNAVAQDVIASIHGV 362

Query: 62  IDRIRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKA 121
           I  IR +++FI++SP+R  K+ +     +I     +CLDV T+WN+TY+ L AA+ +++A
Sbjct: 363 IYNIRESIKFIKASPSREEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQA 422

Query: 122 FGRLEDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQ 173
           F  LE  D +Y    +P+ EDW        +LK+ YD    I  +   TSNL FH+
Sbjct: 423 FSTLETSDDNYNE--APSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHE 474

[Close]

BLAST of Cmc07g0196031 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-21
Identity = 62/176 (35.23%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 2   TLTVDN-ASSNDTAVA----YLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDC 61
           T+T+DN  SS+D   A    YL  + N  L+   +   VRC  HILN +  D     +  
Sbjct: 303 TITLDNDCSSHDIYSANLRDYLSNKNN--LMLKGQLFVVRCYAHILNAVAQDVIASIHGV 362

Query: 62  IDRIRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKA 121
           I  IR +++FI++SP+   K+ +     +I     +CLDV T+WN+TY+ L AA+ +++A
Sbjct: 363 IYNIRESIKFIKASPSCEEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQA 422

Query: 122 FGRLEDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQ 173
           F  LE  D +Y    +P+ EDW        +LK+ YD    I  +   TSNL FH+
Sbjct: 423 FSTLETSDDNYNE--APSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHE 474

[Close]

BLAST of Cmc07g0196031 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 2   TLTVDN-ASSNDTAVAYLLKRFNK---GLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCI 61
           T+T+DN  SS+D   A ++   +     ++   +   VRC  HILN +  D     +  I
Sbjct: 343 TITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVI 402

Query: 62  DRIRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAF 121
             IR +++FI++S     K+ +     +I     +CLDV T+WN+TY+ L AA+ +++ F
Sbjct: 403 YHIRESIKFIKASSVHEDKFAEIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVF 462

Query: 122 GRLEDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQ 173
             LE  D  Y    +P+ EDW        +L + YD    I  +   TSN+ FH+
Sbjct: 463 ASLETCDGDYNE--APSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHE 515

[Close]

BLAST of Cmc07g0196031 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.7e-17
Identity = 60/195 (30.77%), Postives = 95/195 (48.72%), Query Frame = 0


Query: 3   LTVDNASSNDTAVAYL---LKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDR 62
           L++DNAS+N+ AV  +   L+  +  L+    F HVRC  HILNL+  D        I++
Sbjct: 309 LSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEK 368

Query: 63  IRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGR 122
           I+  V  ++SSP ++ +  KC     +D    +  DV TRWNSTY+ L  A+ ++ A  R
Sbjct: 369 IKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIR 428

Query: 123 LEDED----------ASYRHDMSPNKEDWTNARM--------------LIRFLKVFYDVT 171
           L+  D            + +  S N+       M              L + LK F+D+T
Sbjct: 429 LKTSDPRRYVCLNCCTCHHYKFSINQMSIIVGTMQFVLKPRSGRWHLTLFKCLKKFFDLT 488

[Close]

BLAST of Cmc07g0196031 vs. ExPASy TrEMBL
Match: A0A5D3CXI1 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004160 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 164 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 223

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 224 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 283

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 284 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 339

[Close]

BLAST of Cmc07g0196031 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 280 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 339

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 340 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 399

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 400 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 455

[Close]

BLAST of Cmc07g0196031 vs. ExPASy TrEMBL
Match: A0A5D3DAN8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001750 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 215 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 274

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 275 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 334

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 335 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 390

[Close]

BLAST of Cmc07g0196031 vs. ExPASy TrEMBL
Match: A0A5D3DZY7 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2406G00150 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 73  MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 132

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 133 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 192

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 193 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 248

[Close]

BLAST of Cmc07g0196031 vs. ExPASy TrEMBL
Match: A0A5D3BX83 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001050 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 168/176 (95.45%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MTLTVDNASSNDTAVAYLLKRFNKGLLFSEEFLHVRCCGHILNLIVTDAFKEHNDCIDRI 60
           MTLTVDNASSNDTAVAYLLKRFNKGLLF  EFLHVRCC HILNLIVTDAFKEHNDCIDRI
Sbjct: 280 MTLTVDNASSNDTAVAYLLKRFNKGLLFGGEFLHVRCCAHILNLIVTDAFKEHNDCIDRI 339

Query: 61  RYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDVPTRWNSTYMRLEAAVKFEKAFGRL 120
           RYAVRFIRSSP RFLK+KKCIELEKI CKSYVCLDVPTRWNSTYM LEAAVKFEKAF RL
Sbjct: 340 RYAVRFIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRL 399

Query: 121 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 177
           EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV
Sbjct: 400 EDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVV 455

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BLAST of Cmc07g0196031 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 34/137 (24.82%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 37  CCGHILNLIVTDAFKEHNDCIDRIRYAVRFIRSSPTRFLKYKKCIELEKIDCKSYVCLDV 96
           C       +  D  ++  D I  IR +V+ +++S +   ++ +  E  ++  +  + LD 
Sbjct: 336 CVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDD 395

Query: 97  PTRWNSTYMRLEAAVKFEKAFGRLEDEDASYRHDMSPNKEDWTNARMLIRFLKVFYDVTL 156
            T+WN+TYM L AA + ++ F  L+  D  Y+    P+ EDW +   L  FLK  ++   
Sbjct: 396 QTQWNTTYMMLVAASELKEVFSCLDTADPDYK--KPPSAEDWRHVEALCTFLKPLFEAVS 455

Query: 157 KISGSLYTTSNLVFHQI 174
            +  +   ++   FH++
Sbjct: 456 TLQSTGNPSAVTFFHEV 470

The following BLAST results are available for this feature:

BLAST of Cmc07g0196031 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28895.1	1.3e-90	95.45	putative transposase [Cucumis melo var. makuwa]	[more]
TYK12117.1	1.3e-90	95.45	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
TYK23433.1	1.3e-90	95.45	putative transposase [Cucumis melo var. makuwa]	[more]
TYK14363.1	1.3e-90	95.45	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
TYK20578.1	1.3e-90	95.45	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]

BLAST of Cmc07g0196031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08770	4.2e-23	35.67	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
Q6AVI0	2.7e-22	35.80	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	2.3e-21	35.23	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.1e-18	30.86	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
P03010	7.7e-17	30.77	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]

BLAST of Cmc07g0196031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXI1	6.4e-91	95.45	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3CR68	6.4e-91	95.45	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3DAN8	6.4e-91	95.45	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3DZY7	6.4e-91	95.45	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold240...	[more]
A0A5D3BX83	6.4e-91	95.45	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]

BLAST of Cmc07g0196031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.7e-11	24.82	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23272:SF130	OS01G0698300 PROTEIN	coord: 2..173
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 2..173
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0196031.1	Cmc07g0196031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0009228	thiamine biosynthetic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008972	phosphomethylpyrimidine kinase activity
molecular_function	GO:0046983	protein dimerization activity