Cmc06g0178511 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0178511
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	glycine-rich cell wall structural protein 1.8-like
Location	CMiso1.1chr06: 34975817 .. 34977079 (-)
RNA-Seq Expression	Cmc06g0178511
Synteny	Cmc06g0178511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTGTATCCAACTTCACCTTTTTGCATGTGCACCATCTTAACCACTAAGAACAACACACTCCCTGTCCCTATATAAGGAGATCAATGGATGCATTCTAAGGCATCCCTTTTCCATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGCTTAGCTTCGGCGGCCCGATCTCTTCTTTATTACGATATGCCTCCTCATCGATCTGGATACGATAATAATTATGATAATCATCCTGTCGTTAACCCTAAAGTAGGATACGAACACGACCATCATGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGGTGGAGCTGGCTCATCTCTTGGAGGTTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGAAGTGGTGGAGGATATGGTGATTTAGGAGGACATGGAAAAGGGTACGGTAGCGGTGGCGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGATATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTTGGTGGTGCAGGAGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTGGTGGTTATGGTGGTTCCAAAGGATATGGAGCTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGAGGAGCTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAAACAAAGAAAAGATCGAAAGAAAAAAAGAAAGCTCAAAGTTTATGGCTAAAATGAGAATGCTTACCCTAATATCAATGTGTGTGTGTTAGCAAAAAAAAAAATAATAAAAGAATTTGGGTAAGAAATGTTATATTAATTCTCTTTGAGTTTTTAAGTAATTTGAATGTAATATATCTAAAAAATTAATAGCTAATCCATGTGTTCCAAAGTGAACAAACGTGAAGTATATTTTCTCCTTTGTCATCATCAAATTAAACTTGTGGTTATTATGTGGCCTCTCAACATTATTCCAAGATATAGCAACGTCGGGATATTCAACTATTTGTCATATGTAATGTCTTAAGACTAAATCACAA

mRNA sequence

GTAGTGTATCCAACTTCACCTTTTTGCATGTGCACCATCTTAACCACTAAGAACAACACACTCCCTGTCCCTATATAAGGAGATCAATGGATGCATTCTAAGGCATCCCTTTTCCATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGCTTAGCTTCGGCGGCCCGATCTCTTCTTTATTACGATATGCCTCCTCATCGATCTGGATACGATAATAATTATGATAATCATCCTGTCGTTAACCCTAAAGTAGGATACGAACACGACCATCATGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGGTGGAGCTGGCTCATCTCTTGGAGGTTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGAAGTGGTGGAGGATATGGTGATTTAGGAGGACATGGAAAAGGGTACGGTAGCGGTGGCGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGATATGGAAGTGGTGGAGCTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAAACAAAGAAAAGATCGAAAGAAAAAAAGAAAGCTCAAAGTTTATGGCTAAAATGAGAATGCTTACCCTAATATCAATGTGTGTGTGTTAGCAAAAAAAAAAATAATAAAAGAATTTGGGTAAGAAATGTTATATTAATTCTCTTTGAGTTTTTAAGTAATTTGAATGTAATATATCTAAAAAATTAATAGCTAATCCATGTGTTCCAAAGTGAACAAACGTGAAGTATATTTTCTCCTTTGTCATCATCAAATTAAACTTGTGGTTATTATGTGGCCTCTCAACATTATTCCAAGATATAGCAACGTCGGGATATTCAACTATTTGTCATATGTAATGTCTTAAGACTAAATCACAA

Coding sequence (CDS)

ATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGCTTAGCTTCGGCGGCCCGATCTCTTCTTTATTACGATATGCCTCCTCATCGATCTGGATACGATAATAATTATGATAATCATCCTGTCGTTAACCCTAAAGTAGGATACGAACACGACCATCATGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGGTGGAGCTGGCTCATCTCTTGGAGGTTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGAAGTGGTGGAGGATATGGTGATTTAGGAGGACATGGAAAAGGGTACGGTAGCGGTGGCGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGATATGGAAGTGGTGGAGCTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Protein sequence

MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHDGYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGAGAGSGEEGGYDGGYAP

Homology

[Close]

BLAST of Cmc06g0178511 vs. NCBI nr
Match: XP_008448673.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 8.9e-75
Identity = 200/263 (76.05%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 S----------------------------------------------------------- 201
           S                                                           
Sbjct: 181 SGGGGGYGSGVGGAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGAHGSG 240

[Close]

BLAST of Cmc06g0178511 vs. NCBI nr
Match: XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-65
Identity = 180/194 (92.78%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGAGA-GSGEEGG 194
           SGG G  GSG  GG
Sbjct: 181 SGGGGGYGSGVGGG 192

[Close]

BLAST of Cmc06g0178511 vs. NCBI nr
Match: KAE8650021.1 (hypothetical protein Csa_010076 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-65
Identity = 180/194 (92.78%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGAGA-GSGEEGG 194
           SGG G  GSG  GG
Sbjct: 181 SGGGGGYGSGVGGG 192

[Close]

BLAST of Cmc06g0178511 vs. NCBI nr
Match: BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-65
Identity = 179/194 (92.27%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGAGA-GSGEEGG 194
           SGG G  GSG  GG
Sbjct: 181 SGGGGGYGSGVGGG 192

[Close]

BLAST of Cmc06g0178511 vs. NCBI nr
Match: XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 215.3 bits (547), Expect = 4.8e-52
Identity = 164/198 (82.83%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAI +TLSFGFLLLV LGLASA R+LL YD+PPHRSGYD NYD HPV NPKVGYE DHHD
Sbjct: 9   MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRSGYD-NYD-HPVHNPKVGYERDHHD 68

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           G          PYGGGAGGGY  GGGAGSSLGGSGYGSGGGGGSGY G G+HGVGYGSGG
Sbjct: 69  G----------PYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGYAGAGDHGVGYGSGG 128

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 129 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 188

Query: 181 SGGAGA-GSGEEGGYDGG 198
           SGG G  GSG   GY  G
Sbjct: 189 SGGGGGYGSGGGAGYGPG 192

[Close]

BLAST of Cmc06g0178511 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 80/135 (59.26%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGS-GYGSGGGGGSGYGGVGNHGVGYGSG 120
           G Y     H   YGGG GGG G G G G   GG  G G GGG G GYG  G HG GYG G
Sbjct: 329 GGYAAVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGGAGGGYGTGGEHGGGYGGG 388

Query: 121 GGGGYGAGVGSDLGGSGY--GSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGV 180
            GGG G G G D G +GY  G GGGGGSGGGYGD G HG GYG G GGG GYG  G HG 
Sbjct: 389 QGGGGGYGAGGDHGAAGYGGGEGGGGGSGGGYGDGGAHGGGYGGGAGGGGGYGAGGAHGG 448

Query: 181 GYGSGGAGAGSGEEG 193
           GYG GG G G G  G
Sbjct: 449 GYG-GGGGIGGGHGG 462

[Close]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL
Match: A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.3e-75
Identity = 200/263 (76.05%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 S----------------------------------------------------------- 201
           S                                                           
Sbjct: 181 SGGGGGYGSGVGGAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGAHGSG 240

[Close]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL
Match: A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.8e-65
Identity = 180/194 (92.78%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGAGA-GSGEEGG 194
           SGG G  GSG  GG
Sbjct: 181 SGGGGGYGSGVGGG 192

[Close]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL
Match: Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.0e-65
Identity = 179/194 (92.27%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYD NYD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYD-NYD-HPVVNPKVGYEHDRRD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGAGA-GSGEEGG 194
           SGG G  GSG  GG
Sbjct: 181 SGGGGGYGSGVGGG 192

[Close]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL
Match: A0A1S3BK96 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103490775 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 9.4e-38
Identity = 153/261 (58.62%), Postives = 164/261 (62.84%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNN-----YDNHPVVNP----- 60
           MAIS+TLSFGFLLLVSLGLASA RSLL YD PPH+SGYD++     Y       P     
Sbjct: 10  MAISRTLSFGFLLLVSLGLASATRSLLTYD-PPHQSGYDDHNTKVGYGRDRHDEPYGGGA 69

Query: 61  -------------KVGYEHDHHDGYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYG 120
                         VG++HDHHDGY  DRDHHD  YGGGAGGGYGA  GAGSSLGGSGYG
Sbjct: 70  GGGYGAGAGSGYGSVGHDHDHHDGY--DRDHHDRSYGGGAGGGYGA--GAGSSLGGSGYG 129

Query: 121 SGGGGGSGYGGVGNHGVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGK 180
           +          VG+HGVGYGSGG GGYGAGVGSDLGGSGYGSG GGGSGGGYGD+G  GK
Sbjct: 130 N----------VGDHGVGYGSGGSGGYGAGVGSDLGGSGYGSGNGGGSGGGYGDVGSRGK 189

Query: 181 GYGSGGGGGSGYGGRGDHGVGYG-------------------------------SGGAGA 201
           GYG GG GGSGYGGRGD+G G G                                GGAG+
Sbjct: 190 GYGRGGVGGSGYGGRGDYGRGVGHDDVVYGGSKGYGGGSGVGGGAGYSGGAHGSGGGAGS 249

[Close]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL
Match: A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33
Identity = 138/202 (68.32%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
           MAISK  S  FLLL+  GLASAAR+LL      H     N YD       +VGY      
Sbjct: 1   MAISKAFSLSFLLLLGFGLASAARTLL-----GHEPDAYNPYDR------RVGY------ 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGS--GGGGGSGYGGVGNHGVGYGS 120
               DRDHHD  YGGG+GGGYGA  GAGSSLGGSGYGS  GGGGGSGYGG G+HGVGYGS
Sbjct: 61  ----DRDHHDGAYGGGSGGGYGA--GAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGS 120

Query: 121 GGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVG 180
           GGGGGYG G+GS LGG+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGYGG GDHG G
Sbjct: 121 GGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAG 178

Query: 181 YGSGGAGAGSGEEGGYDGGYAP 201
           YGSGG G G G  GG   GY P
Sbjct: 181 YGSGG-GGGYGSGGGGGAGYGP 178

The following BLAST results are available for this feature:

BLAST of Cmc06g0178511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448673.1	8.9e-75	76.05	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]	[more]
XP_011650342.1	3.8e-65	92.78	glycine-rich cell wall structural protein 2 [Cucumis sativus]	[more]
KAE8650021.1	3.8e-65	92.78	hypothetical protein Csa_010076 [Cucumis sativus]	[more]
BAA34064.1	8.4e-65	92.27	glycine-rich protein-2, partial [Cucumis sativus]	[more]
XP_038905926.1	4.8e-52	82.83	glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]	[more]

BLAST of Cmc06g0178511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10496	1.3e-04	59.26	Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2...	[more]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJM7	4.3e-75	76.05	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0L1U7	1.8e-65	92.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1	[more]
Q9ZWM2	4.0e-65	92.27	Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A1S3BK96	9.4e-38	58.62	glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1CWP3	3.1e-33	68.32	glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara...	[more]

BLAST of Cmc06g0178511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 137..147 score: 51.14 coord: 185..200 score: 42.76 coord: 110..125 score: 42.19 coord: 6..22 score: 33.09
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0178511.1	Cmc06g0178511.1	mRNA