Cmc06g0173901 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0173901
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Small ubiquitin-related modifier
Location	CMiso1.1chr06: 30814418 .. 30816495 (+)
RNA-Seq Expression	Cmc06g0173901
Synteny	Cmc06g0173901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCAACGACACATCCTGGCCGTCCATTTAGAACCTCAAAAATTCCACCCACTTTCCCTTTTGAAGACTCAGAGTCACATATAGTGCATAACCGAGGCCAAAACATCACTTCCAGATTTTCCCAACCCTTCTTCTTTACATACAAAGATCAAACAAACCCCACCAAAAATTTTCCCTTCTTCCAACTTCAAATAATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGTTTCTTCATCTTCTAAACCTTATGAATGATTTTTTTTTTCTTTCCATTTTTTCATGTTTTGTTGGGTTGGTTATGATTTTAAGCTGGTTCGATCTTTTTGTTACGTTTTAGTCTATAATGGGTCGTGAGGAATTTGCATGCTTTTTGTTCTGGATCGTTCTAGTGATTTTGGGTTTTGTTTGTTATAGTGGGGATTGGTTCTCTGTTGAAAATTTATTAGAATTTTGGGTTTTGTATGATGGGTTTTTTCTTATTTGTAAATTTGATGGAATACTTATAGGGTGAATAATCAGATGTATGAACTGTCAAGGAATGTTTAGCTGTGAATGATTTTTTTTCAGACCTGTGGCATCTGTACAAACCTTATTGATCTATTGGGAAACTTTGCATGAAACTTAGAATTTGGACTATAATCTCACTCAATACTCCAAATGCTTACCAATGGGTCAGGGGTCAGATCACAGGACTTTTGTTATGCATGTTGTTCTGTATACAGTGCTTGTAAGCTATTCAAGTTGGGATTCTTTGAATCTACATTCTCTATCTCTTCAGTTTTGGTTGAATTGACGGTTTTTGCGTTACATATGGTATCTTCGTTACTAATTTTGTATTGGGGAGAAGGAAAATGCAGCAATGCTTTATTTTATCTTGCTTTGCCTGGTCCCTTATAGTTCTTCCATGTGGGTTTTAGCTATGTTCTTCTTTTCCCTCCAAAATTTGAGATGTTCAATCTGTGAAGTTTTTTTTTTCAACTAATGTTAGATTGCTTGAAGCTTTAATTGCGTATCTTTGAGTTGGGTTTTCTGAGAGGTTGAAATATAATCAGGATTACTGGGGATCTAAGAAGTGTTGTAATGAGTGAAAAATCGAAGGATTGTGAAGCATGAAAATGGAGGGTTGGGTAGAAAACCACCAGAATGGAAGGAGGTTGGTATCACAATTGCACCCAAAATGCGTAATCCAAACATGGGTTTTGGATTACATCACACTACAAACCCATAACATTTCAGCCCCCAAACAGCCCCTAAGTCAATAAAACTTTTCTTGAATATGTGATCTAGCAAGTTGCTTTATGTGTTTCTTATTCTCTTGTATGCTGGCCATGTTTCTATAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGGTATTGTGCCATCCCTTTCATTGCCTCAGAAATTAAACCATAATAACTGTTTTCTAGTTTCATTTTCATACGTTGTTTGTGTACGATCACAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAAGTTAATCTCGGAGACAAAATAGTTCCTCAAACATCATTTGCAATCCTATAATTTTCTTGCTACTGCTAGTATATGCCTGAACTTCTGCTGCTGGATGTTGCTTCTGTCTATATAAATTATGACTACGATTTCTGCTTCTTCCAGTTCTCTAGAAGTGAAAGAGACAATGTCGGGACTCCTTTATATACGTAAATGCTGTTGATGTCGATTGCTCCTATTTCATTTTTCTGACTACATCCTGAAGTTACAATGTGATTATGTTTGGCTTGTGTATCTTTGTTCCTGGGACATGAAACTTTCAAAAGGTAAAATAACAGTTCTTGTGAAGGAGCTTCAAAGATTTTTAGCATATGTGCATCTCAACTAATCT

mRNA sequence

ATGAATCCAACGACACATCCTGGCCGTCCATTTAGAACCTCAAAAATTCCACCCACTTTCCCTTTTGAAGACTCAGAGTCACATATAGTGCATAACCGAGGCCAAAACATCACTTCCAGATTTTCCCAACCCTTCTTCTTTACATACAAAGATCAAACAAACCCCACCAAAAATTTTCCCTTCTTCCAACTTCAAATAATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGTGGGGATTGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAAGTTAATCTCGGAGACAAAATAGTTCCTCAAACATCATTTGCAATCCTATAATTTTCTTGCTACTGCTAGTATATGCCTGAACTTCTGCTGCTGGATGTTGCTTCTGTCTATATAAATTATGACTACGATTTCTGCTTCTTCCAGTTCTCTAGAAGTGAAAGAGACAATGTCGGGACTCCTTTATATACGTAAATGCTGTTGATGTCGATTGCTCCTATTTCATTTTTCTGACTACATCCTGAAGTTACAATGTGATTATGTTTGGCTTGTGTATCTTTGTTCCTGGGACATGAAACTTTCAAAAGGTAAAATAACAGTTCTTGTGAAGGAGCTTCAAAGATTTTTAGCATATGTGCATCTCAACTAATCT

Coding sequence (CDS)

ATGAATCCAACGACACATCCTGGCCGTCCATTTAGAACCTCAAAAATTCCACCCACTTTCCCTTTTGAAGACTCAGAGTCACATATAGTGCATAACCGAGGCCAAAACATCACTTCCAGATTTTCCCAACCCTTCTTCTTTACATACAAAGATCAAACAAACCCCACCAAAAATTTTCCCTTCTTCCAACTTCAAATAATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGTGGGGATTGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAA

Protein sequence

MNPTTHPGRPFRTSKIPPTFPFEDSESHIVHNRGQNITSRFSQPFFFTYKDQTNPTKNFPFFQLQIMSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII

Homology

[Close]

BLAST of Cmc06g0173901 vs. NCBI nr
Match: XP_004149348.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_008449142.2 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KGN56103.1 hypothetical protein Csa_011007 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 6.6e-47
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 170
           NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Sbjct: 61  NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 100

[Close]

BLAST of Cmc06g0173901 vs. NCBI nr
Match: XP_038905908.1 (small ubiquitin-related modifier 1 [Benincasa hispida])

HSP 1 Score: 197.6 bits (501), Expect = 8.7e-47
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 170
           NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA+I
Sbjct: 61  NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAVI 100

[Close]

BLAST of Cmc06g0173901 vs. NCBI nr
Match: XP_022158763.1 (small ubiquitin-related modifier 1-like [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-45
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIK+STQLKKLMNAYCDRQSV+L
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKKSTQLKKLMNAYCDRQSVEL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 170
           NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Sbjct: 61  NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGTII 100

[Close]

BLAST of Cmc06g0173901 vs. NCBI nr
Match: XP_018812104.1 (small ubiquitin-related modifier 1 [Juglans regia] >XP_040988284.1 small ubiquitin-related modifier 1 [Juglans microcarpa x Juglans regia] >XP_042950623.1 small ubiquitin-related modifier 1 [Carya illinoinensis] >KAB1215151.1 Small ubiquitin-related modifier 1 [Morella rubra] >KAG2682371.1 hypothetical protein I3760_11G188300 [Carya illinoinensis] >KAG6637670.1 hypothetical protein CIPAW_11G193900 [Carya illinoinensis] >KAG6689772.1 hypothetical protein I3842_11G191100 [Carya illinoinensis] >KAG7957712.1 hypothetical protein I3843_11G189000 [Carya illinoinensis])

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-43
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSV+L
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVEL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 168
           NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61  NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAVA 98

[Close]

BLAST of Cmc06g0173901 vs. NCBI nr
Match: XP_023895256.1 (small ubiquitin-related modifier 1 [Quercus suber] >XP_030928996.1 small ubiquitin-related modifier 1 [Quercus lobata] >XP_030930287.1 small ubiquitin-related modifier 1 [Quercus lobata])

HSP 1 Score: 185.3 bits (469), Expect = 4.5e-43
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDI 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 168
           +SIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61  SSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGATA 98

[Close]

BLAST of Cmc06g0173901 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-41
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 72  NQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 131
           NQEEDKKP D  AHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAF
Sbjct: 4   NQEEDKKPGDGGAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAF 63

Query: 132 LFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG 167
           LFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Sbjct: 64  LFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSG 95

[Close]

BLAST of Cmc06g0173901 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.8e-40
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 74  EEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 133
           EEDKKP DQ AHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLF
Sbjct: 6   EEDKKP-DQGAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLF 65

Query: 134 DGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 166
           DGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Sbjct: 66  DGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 93

[Close]

BLAST of Cmc06g0173901 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-37
Identity = 80/94 (85.11%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 74  EEDKKPT---DQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 133
           EEDKKP       AHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IA
Sbjct: 6   EEDKKPAGGEGGGAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIA 65

Query: 134 FLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 165
           FLFDGRRLR EQTP+ELEMEDGDEIDAMLHQTGG
Sbjct: 66  FLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of Cmc06g0173901 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.5e-22
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 68  SGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 127
           +G T+Q++ K  T+   HINLKV GQ   D NEVFF+IK++T+  KLM  YC RQ   +N
Sbjct: 21  TGDTSQQDVKPSTE---HINLKVVGQ---DNNEVFFKIKKTTEFSKLMKIYCARQGKSMN 80

Query: 128 SIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 165
           S+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Sbjct: 81  SLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]

BLAST of Cmc06g0173901 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 75  EDKKPTD--QSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 134
           +D KP D  Q AH+ LKVK Q   DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQ---DGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 64

Query: 135 FDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 165
           F+G R+   +TP+EL+MEDGD IDA    +GG
Sbjct: 65  FNGARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of Cmc06g0173901 vs. ExPASy TrEMBL
Match: A0A0A0L2Y3 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_3G073930 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.2e-47
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 170
           NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Sbjct: 61  NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 100

[Close]

BLAST of Cmc06g0173901 vs. ExPASy TrEMBL
Match: A0A1S3BKS1 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103491091 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.2e-47
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 170
           NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Sbjct: 61  NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 100

[Close]

BLAST of Cmc06g0173901 vs. ExPASy TrEMBL
Match: A0A6J1DX09 (Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111025229 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.1e-46
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIK+STQLKKLMNAYCDRQSV+L
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKKSTQLKKLMNAYCDRQSVEL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 170
           NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Sbjct: 61  NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGTII 100

[Close]

BLAST of Cmc06g0173901 vs. ExPASy TrEMBL
Match: A0A6A1VQH5 (Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSV+L
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVEL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 168
           NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61  NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAVA 98

[Close]

BLAST of Cmc06g0173901 vs. ExPASy TrEMBL
Match: A0A2I4DY72 (Small ubiquitin-related modifier OS=Juglans regia OX=51240 GN=LOC108984556 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 67  MSGVTNQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDL 126
           MSGVTNQEEDKKPTDQSAHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSV+L
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVEL 60

Query: 127 NSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 168
           NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61  NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAVA 98

[Close]

BLAST of Cmc06g0173901 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 171.0 bits (432), Expect = 8.1e-43
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 72  NQEEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAF 131
           NQEEDKKP D  AHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAF
Sbjct: 4   NQEEDKKPGDGGAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAF 63

Query: 132 LFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG 167
           LFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Sbjct: 64  LFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSG 95

[Close]

BLAST of Cmc06g0173901 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 166.4 bits (420), Expect = 2.0e-41
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 74  EEDKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 133
           EEDKKP DQ AHINLKVKGQ   DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLF
Sbjct: 6   EEDKKP-DQGAHINLKVKGQ---DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLF 65

Query: 134 DGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 166
           DGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Sbjct: 66  DGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 93

[Close]

BLAST of Cmc06g0173901 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-40
Identity = 86/102 (84.31%), Postives = 87/102 (85.29%), Query Frame = 0


Query: 74  EEDKKPTDQSAHINLKVKGQ-------W---GLDGNEVFFRIKRSTQLKKLMNAYCDRQS 133
           EEDKKP DQ AHINLKVKGQ       W     DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 134 VDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 166
           VD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 106

[Close]

BLAST of Cmc06g0173901 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 75  EDKKPTD--QSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 134
           +D KP D  Q AH+ LKVK Q   DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+
Sbjct: 5   QDDKPIDQEQEAHVILKVKSQ---DGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 64

Query: 135 FDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 165
           F+G R+   +TP+EL+MEDGD IDA    +GG
Sbjct: 65  FNGARIGGLETPDELDMEDGDVIDACRAMSGG 93

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BLAST of Cmc06g0173901 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 8.2e-19
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 76  DKKPTDQSAHINLKVKGQWGLDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 135
           DKKP   S+HI +KVK Q   D   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG
Sbjct: 5   DKKPLIPSSHITVKVKNQ---DDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDG 64

Query: 136 RRLRAEQTPEELEMEDGDEIDAMLHQTGG 165
            R++  QTP EL +ED DEI+A   Q GG
Sbjct: 65  NRIKLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:

BLAST of Cmc06g0173901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149348.1	6.6e-47	97.09	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_008449142.2 PREDICTED: ...	[more]
XP_038905908.1	8.7e-47	96.12	small ubiquitin-related modifier 1 [Benincasa hispida]	[more]
XP_022158763.1	1.3e-45	94.17	small ubiquitin-related modifier 1-like [Momordica charantia]	[more]
XP_018812104.1	2.6e-43	93.07	small ubiquitin-related modifier 1 [Juglans regia] >XP_040988284.1 small ubiquit...	[more]
XP_023895256.1	4.5e-43	92.08	small ubiquitin-related modifier 1 [Quercus suber] >XP_030928996.1 small ubiquit...	[more]

BLAST of Cmc06g0173901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	1.1e-41	89.47	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	2.8e-40	92.39	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	2.9e-37	85.11	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	4.5e-22	54.64	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	1.8e-18	52.17	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Cmc06g0173901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Y3	3.2e-47	97.09	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_3G073930 PE=3...	[more]
A0A1S3BKS1	3.2e-47	97.09	Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103491091 PE=3 SV...	[more]
A0A6J1DX09	6.1e-46	94.17	Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111025229 ...	[more]
A0A6A1VQH5	1.3e-43	93.07	Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 ...	[more]
A0A2I4DY72	1.3e-43	93.07	Small ubiquitin-related modifier OS=Juglans regia OX=51240 GN=LOC108984556 PE=3 ...	[more]

BLAST of Cmc06g0173901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	8.1e-43	89.47	small ubiquitin-like modifier 1	[more]
AT5G55160.1	2.0e-41	92.39	small ubiquitin-like modifier 2	[more]
AT5G55160.2	2.2e-40	84.31	small ubiquitin-like modifier 2	[more]
AT5G55170.1	1.3e-19	52.17	small ubiquitin-like modifier 3	[more]
AT5G55856.1	8.2e-19	50.56	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 86..160 e-value: 4.5E-13 score: 59.4
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 84..164 score: 15.710161
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 86..159 e-value: 7.9E-22 score: 76.9
None	No IPR available	GENE3D	3.10.20.90		coord: 65..164 e-value: 5.7E-38 score: 131.6
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 67..165
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 67..165
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 84..160 e-value: 2.43649E-48 score: 149.301
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 73..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0173901.1	Cmc06g0173901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding