Cmc06g0171901 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0171901
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	SWIM-type domain-containing protein
Location	CMiso1.1chr06: 27729095 .. 27730245 (-)
RNA-Seq Expression	Cmc06g0171901
Synteny	Cmc06g0171901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTAATAGTAAAATTTTCCCTCTTGCATTTAGTATAGTAGATTCGGAGAATGATGCTTCTTGGAAATGGTTTTTTGAACAATTAAAACTTTCTTTTGGAGATCGAGAGGGATTGGTTATTATTTCTGATAGACATATAAGTATTCCAAATGGTGTTTTAGATGTGTTTCCAACGGTACAATATTGCGTTTGTGTAGAACATCTTTTAAAAAGTGTGAAGTTGTCATTTAAAGACTCTTTAATTGAAAAGCTTTTTCGTCAATGTGCATACTCGTATACAATAGATGATTTCGGGTTATATATGAGATGGATGGAGTTGATATACCCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAAAAGCAGCCTCATGTTTAAAGAGTGTTTTGAGTTATTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGGCTTCATTGTAAGTGTTATGTTTTAGATATTTGTTTATAATAGTCAATTATCGATATACTGTATTGAAGTGTAATGATTAGTTAATACACTGATGATATACCATAATTTTTTGTGTTCAGGTGAATCCTGTGAGTGAAGTTGAATTTCAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAGAAATTCCATGTGCTCATGCTCTTATTGTGATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATGCTACTGTATTGTCTGCAACTTATGGTGGTTTAGTTCGTCCGATTGGTAACCATACTGATTGGAGTGTTGTGGAGGTGAACGACAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCAAAGAGCTCAAAATGTAGTCGTTGTAAGAGAGCCGGTCATAATATTAGAACTTGTACATTTGAACCTATTTGA

mRNA sequence

ATGGATGGTAATAGTAAAATTTTCCCTCTTGCATTTAGTATAGTAGATTCGGAGAATGATGCTTCTTGGAAATGGTTTTTTGAACAATTAAAACTTTCTTTTGGAGATCGAGAGGGATTGGTTATTATTTCTGATAGACATATAAGTATTCCAAATGGTGTTTTAGATGTGTTTCCAACGGTACAATATTGCGTTTGTGTAGAACATCTTTTAAAAAGTGTGAAGTTGTCATTTAAAGACTCTTTAATTGAAAAGCTTTTTCGTCAATGTGCATACTCGTATACAATAGATGATTTCGGGTTATATATGAGATGGATGGAGTTGATATACCCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAAAAGCAGCCTCATGTTTAAAGAGTGTTTTGAGTTATTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGGCTTCATTGTAAGTGTTATGTGAATCCTGTGAGTGAAGTTGAATTTCAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAGAAATTCCATGTGCTCATGCTCTTATTGTGATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATGCTACTGTATTGTCTGCAACTTATGGTGGTTTAGTTCGTCCGATTGGTAACCATACTGATTGGAGTGTTGTGGAGGTGAACGACAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCAAAGAGCTCAAAATGTAGTCGTTGTAAGAGAGCCGGTCATAATATTAGAACTTGTACATTTGAACCTATTTGA

Coding sequence (CDS)

ATGGATGGTAATAGTAAAATTTTCCCTCTTGCATTTAGTATAGTAGATTCGGAGAATGATGCTTCTTGGAAATGGTTTTTTGAACAATTAAAACTTTCTTTTGGAGATCGAGAGGGATTGGTTATTATTTCTGATAGACATATAAGTATTCCAAATGGTGTTTTAGATGTGTTTCCAACGGTACAATATTGCGTTTGTGTAGAACATCTTTTAAAAAGTGTGAAGTTGTCATTTAAAGACTCTTTAATTGAAAAGCTTTTTCGTCAATGTGCATACTCGTATACAATAGATGATTTCGGGTTATATATGAGATGGATGGAGTTGATATACCCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAAAAGCAGCCTCATGTTTAAAGAGTGTTTTGAGTTATTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGGCTTCATTGTAAGTGTTATGTGAATCCTGTGAGTGAAGTTGAATTTCAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAGAAATTCCATGTGCTCATGCTCTTATTGTGATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATGCTACTGTATTGTCTGCAACTTATGGTGGTTTAGTTCGTCCGATTGGTAACCATACTGATTGGAGTGTTGTGGAGGTGAACGACAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAGTTTCAAAGAGCTCAAAATGTAGTCGTTGTAAGAGAGCCGGTCATAATATTAGAACTTGTACATTTGAACCTATTTGA

Protein sequence

MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPTVQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI

Homology

[Close]

BLAST of Cmc06g0171901 vs. NCBI nr
Match: XP_016900337.1 (PREDICTED: uncharacterized protein LOC107990862 [Cucumis melo])

HSP 1 Score: 660.2 bits (1702), Expect = 9.8e-186
Identity = 328/349 (93.98%), Postives = 331/349 (94.84%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGL+II DRHISIP GVLDV PT
Sbjct: 38  MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLIIIFDRHISIPKGVLDVCPT 97

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
           VQYCV VEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDF LYMR ME IYPSIRGYLMKV
Sbjct: 98  VQYCVYVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFELYMRSMESIYPSIRGYLMKV 157

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
           GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA
Sbjct: 158 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 217

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
           SCLKSVLS W+EGLIRKLVDESR       VNPVSEVEFQVVDGGKNFLVKLNCNSCSCL
Sbjct: 218 SCLKSVLSSWSEGLIRKLVDESRSF----IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 277

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
           FWDLEEIP AHALIVI SLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVE+ND
Sbjct: 278 FWDLEEIPWAHALIVICSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEMND 337

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 350
           NILPPVFRRPA RPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI
Sbjct: 338 NILPPVFRRPAERPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 382

[Close]

BLAST of Cmc06g0171901 vs. NCBI nr
Match: KAA0062637.1 (uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa])

HSP 1 Score: 530.4 bits (1365), Expect = 1.2e-146
Identity = 273/349 (78.22%), Postives = 275/349 (78.80%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFG R                       
Sbjct: 356 MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGSR----------------------- 415

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
                                              IDDF LYMRWME IYPSIRGYL+KV
Sbjct: 416 ----------------------------------GIDDFELYMRWMESIYPSIRGYLLKV 475

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
           GFERWS AYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA
Sbjct: 476 GFERWSCAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 535

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
           SCLKSVLS WAEGLIRKLVDESR       VNPVSEVEFQVVDGGKNFLVKLNCNSCSCL
Sbjct: 536 SCLKSVLSSWAEGLIRKLVDESRSF----IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 595

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
           FWDLEEI CAHALIVIRSLNLNPYAFVSQYYYATVL ATYGGLVR IGNHTDWSVVEVND
Sbjct: 596 FWDLEEISCAHALIVIRSLNLNPYAFVSQYYYATVLCATYGGLVRSIGNHTDWSVVEVND 643

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 350
           NILPP+FRRP GRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI
Sbjct: 656 NILPPIFRRPTGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 643

[Close]

BLAST of Cmc06g0171901 vs. NCBI nr
Match: TYJ96591.1 (uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 490.7 bits (1262), Expect = 1.0e-134
Identity = 244/274 (89.05%), Postives = 248/274 (90.51%), Query Frame = 0


Query: 83  IEKLFRQCAYSYTI-------DDFGLYMRWMELIYPSIRGYLMKVGFERWSRAYSRKRRY 142
           ++  F +C Y  T+       DDF LYMRWME IYPSIRGYLMKVGFERWSRAYSRKRRY
Sbjct: 338 VDGTFLKCKYGGTLLTAATMDDDFELYMRWMESIYPSIRGYLMKVGFERWSRAYSRKRRY 397

Query: 143 QIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLSYWAEGLI 202
           QIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLS WAEGLI
Sbjct: 398 QIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLSSWAEGLI 457

Query: 203 RKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIV 262
           RKLVDESR       VNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIV
Sbjct: 458 RKLVDESRSF----IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIV 517

Query: 263 IRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPR 322
           IRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVV VNDNILPPVFRRPAGRPR
Sbjct: 518 IRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVGVNDNILPPVFRRPAGRPR 577

Query: 323 KRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 350
           KRRIPSIGEVSKSSKCSRCKRA HNIRTC FEPI
Sbjct: 578 KRRIPSIGEVSKSSKCSRCKRASHNIRTCRFEPI 607

[Close]

BLAST of Cmc06g0171901 vs. NCBI nr
Match: XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-113
Identity = 193/332 (58.13%), Postives = 258/332 (77.71%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           +DGN++ FPLAFSIVDSENDASWKWFFE +K SFG+REGLVIIS+RH+SIP G++ V PT
Sbjct: 362 VDGNNENFPLAFSIVDSENDASWKWFFENIKNSFGEREGLVIISNRHLSIPQGIMSVCPT 421

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
            +YC+C+ HLL+++K ++KDSLI+K+F  CA +YTID+F L M+WME IYPSIR YL +V
Sbjct: 422 AEYCICIRHLLQNMKTTYKDSLIDKIFYSCAEAYTIDNFELNMKWMESIYPSIREYLSEV 481

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
           GFE+W+RAYSR++RY++MTTNI ESL+S L+  R+ P+ASLL++IR+ LQ WFYER K A
Sbjct: 482 GFEKWARAYSRRKRYRMMTTNISESLSSVLEESREFPIASLLDSIRQLLQDWFYERSKLA 541

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
           S +K+VL+ WAE  +R   ++SR       V+ ++  E++VVDG  +++V +   SCSC 
Sbjct: 542 SSMKTVLTSWAENELRDQHNQSRNFK----VDSINNEEYKVVDGDNHYVVNVISKSCSCC 601

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
           FWDLEEIPCAHA  V+  LNL+ YAFVS YY++   S+TY   + PIGNH+DWS V+V+ 
Sbjct: 602 FWDLEEIPCAHACAVLSELNLDSYAFVSDYYFSNTFSSTYKRSIHPIGNHSDWSSVDVDG 661

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCS 333
           N+LPP+ +R  GRPRK+RI S+GE     KCS
Sbjct: 662 NVLPPIVKRQVGRPRKQRILSMGEERSHMKCS 689

[Close]

BLAST of Cmc06g0171901 vs. NCBI nr
Match: TYK09469.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK15164.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK16240.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK20570.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 419.5 bits (1077), Expect = 2.9e-113
Identity = 198/348 (56.90%), Postives = 251/348 (72.13%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           +DGN++IFPLAFSIVDSENDASW+WFFE +K S GDRE LV+ISDRH+SIP  V +VFP 
Sbjct: 368 IDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLVVISDRHLSIPKSVHNVFPN 427

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
            +YCVC++HLLKS+KL +KD +I+KLF +C  +YT+ DF   MRWME +YPSIR YL KV
Sbjct: 428 AEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFETNMRWMESMYPSIRDYLSKV 487

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
            FE+W+RAY  ++RYQ+MTTNI ESLN+ LK  RDLPVA+LL++IR+ LQ WFY+RRK A
Sbjct: 488 SFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAALLDSIRQILQNWFYDRRKVA 547

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
            C+++VL+ WAEG +R     SR       VN +++VEFQV+DG K F+V+L+C SC+C 
Sbjct: 548 CCMRTVLTSWAEGELRIQHQNSRSF----TVNAINDVEFQVIDGRKQFIVRLDCKSCTCR 607

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
            WDL+EIPCAHAL V+R L                         RP+GNH +W  + + +
Sbjct: 608 VWDLDEIPCAHALAVLRGL-------------------------RPVGNHANWKSIGIEN 667

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEP 349
           NILPP F+R AGRPRK+RI SIGE    S+CS C RAGHN R C F P
Sbjct: 668 NILPPTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNCKFPP 686

[Close]

BLAST of Cmc06g0171901 vs. ExPASy TrEMBL
Match: A0A1S4DWH2 (uncharacterized protein LOC107990862 OS=Cucumis melo OX=3656 GN=LOC107990862 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 4.7e-186
Identity = 328/349 (93.98%), Postives = 331/349 (94.84%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGL+II DRHISIP GVLDV PT
Sbjct: 38  MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLIIIFDRHISIPKGVLDVCPT 97

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
           VQYCV VEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDF LYMR ME IYPSIRGYLMKV
Sbjct: 98  VQYCVYVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFELYMRSMESIYPSIRGYLMKV 157

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
           GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA
Sbjct: 158 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 217

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
           SCLKSVLS W+EGLIRKLVDESR       VNPVSEVEFQVVDGGKNFLVKLNCNSCSCL
Sbjct: 218 SCLKSVLSSWSEGLIRKLVDESRSF----IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 277

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
           FWDLEEIP AHALIVI SLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVE+ND
Sbjct: 278 FWDLEEIPWAHALIVICSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEMND 337

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 350
           NILPPVFRRPA RPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI
Sbjct: 338 NILPPVFRRPAERPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 382

[Close]

BLAST of Cmc06g0171901 vs. ExPASy TrEMBL
Match: A0A5A7V6N4 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001490 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 5.6e-147
Identity = 273/349 (78.22%), Postives = 275/349 (78.80%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFG R                       
Sbjct: 356 MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGSR----------------------- 415

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
                                              IDDF LYMRWME IYPSIRGYL+KV
Sbjct: 416 ----------------------------------GIDDFELYMRWMESIYPSIRGYLLKV 475

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
           GFERWS AYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA
Sbjct: 476 GFERWSCAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 535

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
           SCLKSVLS WAEGLIRKLVDESR       VNPVSEVEFQVVDGGKNFLVKLNCNSCSCL
Sbjct: 536 SCLKSVLSSWAEGLIRKLVDESRSF----IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 595

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
           FWDLEEI CAHALIVIRSLNLNPYAFVSQYYYATVL ATYGGLVR IGNHTDWSVVEVND
Sbjct: 596 FWDLEEISCAHALIVIRSLNLNPYAFVSQYYYATVLCATYGGLVRSIGNHTDWSVVEVND 643

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 350
           NILPP+FRRP GRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI
Sbjct: 656 NILPPIFRRPTGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 643

[Close]

BLAST of Cmc06g0171901 vs. ExPASy TrEMBL
Match: A0A5D3BD68 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00090 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 5.0e-135
Identity = 244/274 (89.05%), Postives = 248/274 (90.51%), Query Frame = 0


Query: 83  IEKLFRQCAYSYTI-------DDFGLYMRWMELIYPSIRGYLMKVGFERWSRAYSRKRRY 142
           ++  F +C Y  T+       DDF LYMRWME IYPSIRGYLMKVGFERWSRAYSRKRRY
Sbjct: 338 VDGTFLKCKYGGTLLTAATMDDDFELYMRWMESIYPSIRGYLMKVGFERWSRAYSRKRRY 397

Query: 143 QIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLSYWAEGLI 202
           QIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLS WAEGLI
Sbjct: 398 QIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLSSWAEGLI 457

Query: 203 RKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIV 262
           RKLVDESR       VNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIV
Sbjct: 458 RKLVDESRSF----IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPCAHALIV 517

Query: 263 IRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPR 322
           IRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVV VNDNILPPVFRRPAGRPR
Sbjct: 518 IRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVGVNDNILPPVFRRPAGRPR 577

Query: 323 KRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEPI 350
           KRRIPSIGEVSKSSKCSRCKRA HNIRTC FEPI
Sbjct: 578 KRRIPSIGEVSKSSKCSRCKRASHNIRTCRFEPI 607

[Close]

BLAST of Cmc06g0171901 vs. ExPASy TrEMBL
Match: A0A5D3DAW8 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001090 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.4e-113
Identity = 198/348 (56.90%), Postives = 251/348 (72.13%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           +DGN++IFPLAFSIVDSENDASW+WFFE +K S GDRE LV+ISDRH+SIP  V +VFP 
Sbjct: 368 IDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLVVISDRHLSIPKSVHNVFPN 427

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
            +YCVC++HLLKS+KL +KD +I+KLF +C  +YT+ DF   MRWME +YPSIR YL KV
Sbjct: 428 AEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFETNMRWMESMYPSIRDYLSKV 487

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
            FE+W+RAY  ++RYQ+MTTNI ESLN+ LK  RDLPVA+LL++IR+ LQ WFY+RRK A
Sbjct: 488 SFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAALLDSIRQILQNWFYDRRKVA 547

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
            C+++VL+ WAEG +R     SR       VN +++VEFQV+DG K F+V+L+C SC+C 
Sbjct: 548 CCMRTVLTSWAEGELRIQHQNSRSF----TVNAINDVEFQVIDGRKQFIVRLDCKSCTCR 607

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
            WDL+EIPCAHAL V+R L                         RP+GNH +W  + + +
Sbjct: 608 VWDLDEIPCAHALAVLRGL-------------------------RPVGNHANWKSIGIEN 667

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEP 349
           NILPP F+R AGRPRK+RI SIGE    S+CS C RAGHN R C F P
Sbjct: 668 NILPPTFKRRAGRPRKQRILSIGEKKSHSRCSHCHRAGHNRRNCKFPP 686

[Close]

BLAST of Cmc06g0171901 vs. ExPASy TrEMBL
Match: A0A5A7T3G5 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00710 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 3.1e-113
Identity = 198/348 (56.90%), Postives = 251/348 (72.13%), Query Frame = 0


Query: 1   MDGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISIPNGVLDVFPT 60
           +DGN++IFPLAFSIVDSENDASW+WFFE +K S GDRE LV+ISDRH+SIP  V +VFP 
Sbjct: 368 IDGNNQIFPLAFSIVDSENDASWRWFFENIKNSLGDREDLVVISDRHLSIPKSVHNVFPN 427

Query: 61  VQYCVCVEHLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSIRGYLMKV 120
            +YCVC++HLLKS+KL +KD +I+KLF +C  +YT+ DF   MRWME +YPSIR YL KV
Sbjct: 428 AEYCVCLQHLLKSLKLIYKDPIIDKLFFRCGKAYTVVDFETNMRWMESMYPSIRDYLSKV 487

Query: 121 GFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAA 180
            FE+W+RAY  ++RYQ+MTTNI ESLN+ LK  RDLPVA+LL++IR+ LQ WFY+RRK A
Sbjct: 488 SFEKWARAYCTRKRYQMMTTNISESLNAVLKESRDLPVAALLDSIRQILQNWFYDRRKVA 547

Query: 181 SCLKSVLSYWAEGLIRKLVDESRRLHCKCYVNPVSEVEFQVVDGGKNFLVKLNCNSCSCL 240
            C+++VL+ WAEG +R     SR       VN +++VEFQV+DG K F+V+L+C SC+C 
Sbjct: 548 CCMRTVLTSWAEGELRIQHQNSRSF----TVNAINDVEFQVIDGRKQFIVRLDCKSCTCR 607

Query: 241 FWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVEVND 300
            WDL+EIPCAHAL V+R L                         RP+GNH +W  + + +
Sbjct: 608 VWDLDEIPCAHALAVLRGL-------------------------RPVGNHANWKSIGIEN 667

Query: 301 NILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTFEP 349
           NILPP F+R AGRPRK+RI SIGE    S+CS C RAGHN R C F P
Sbjct: 668 NILPPTFKRRAGRPRKQRILSIGEKKIHSRCSHCHRAGHNRRNCKFPP 686

[Close]

BLAST of Cmc06g0171901 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 83.2 bits (204), Expect = 4.6e-16
Identity = 80/331 (24.17%), Postives = 136/331 (41.09%), Query Frame = 0


Query: 2   DGNSKIFPLAFSIVDSENDASWKWFFEQLKLSFGDREGLVIISDRHISI-----PNGVLD 61
           D  ++ FPLAF++    +  SW+WF  +++     R+G+ +IS     I       G   
Sbjct: 404 DATNQYFPLAFAVTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPDILAVINEPGSQW 463

Query: 62  VFPTVQYCVCVEHL---LKSVKLSFKDSLIEKLFRQCAYSYTIDDFGLYMRWMELIYPSI 121
             P   +  C+ HL   L SV   F D  +  L  +   S   ++F  YM+ ++   P  
Sbjct: 464 KEPWAYHRFCLYHLCSKLCSVSPGF-DYNMHFLVDEAGSSSQKEEFDSYMKEIKERNPEA 523

Query: 122 RGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWF 181
             +L +    +W+ A+   RRY IM  +  E+L +  K  R + +A  +  +   L+  F
Sbjct: 524 WKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFAVCKRFRKVAMAGGVMLLFGQLKDAF 583

Query: 182 YERRKAASCLKSVLSYWAEGLIRKLVD-ESRRLHCKCYVNPVSEVEFQVVDGGK------ 241
            E  K +         + E ++ KL + E+        + P+    +QV    K      
Sbjct: 584 AESFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTWVITITPLERDAYQVSMAPKKKTRLM 643

Query: 242 -------NFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSAT 301
                  + +V+LN  +C+C  +   + PC HAL V   L +NP  +V   Y       T
Sbjct: 644 GQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKT 703

Query: 302 YGGLVRPIGNHTDWSVVEVNDNILPPVFRRP 311
           Y     P+   + W        ++PPV   P
Sbjct: 704 YSAKFSPVPELSAWPEAYGVPTLIPPVIEPP 732

The following BLAST results are available for this feature:

BLAST of Cmc06g0171901 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900337.1	9.8e-186	93.98	PREDICTED: uncharacterized protein LOC107990862 [Cucumis melo]	[more]
KAA0062637.1	1.2e-146	78.22	uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]	[more]
TYJ96591.1	1.0e-134	89.05	uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]	[more]
XP_038907134.1	1.3e-113	58.13	uncharacterized protein LOC120092945 [Benincasa hispida]	[more]
TYK09469.1	2.9e-113	56.90	protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] >TYK14307.1 prot...	[more]

BLAST of Cmc06g0171901 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0171901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWH2	4.7e-186	93.98	uncharacterized protein LOC107990862 OS=Cucumis melo OX=3656 GN=LOC107990862 PE=...	[more]
A0A5A7V6N4	5.6e-147	78.22	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BD68	5.0e-135	89.05	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3DAW8	1.4e-113	56.90	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7T3G5	3.1e-113	56.90	Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cmc06g0171901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49920.1	4.6e-16	24.17	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 235..262 e-value: 1.1E-6 score: 38.2
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 223..259 e-value: 1.1E-7 score: 31.4
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 228..260 score: 9.965035
IPR018289	MULE transposase domain	PFAM	PF10551	MULE	coord: 2..72 e-value: 1.4E-11 score: 44.7
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 1..336
None	No IPR available	PANTHER	PTHR31973:SF106	OS09G0268600 PROTEIN	coord: 1..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0171901.1	Cmc06g0171901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding