Cmc06g0171361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0171361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	rRNA 2'-O-methyltransferase fibrillarin 2
Location	CMiso1.1chr06: 27193259 .. 27193623 (+)
RNA-Seq Expression	Cmc06g0171361
Synteny	Cmc06g0171361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTAATCCTCCCTTCAATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGTGAGTCACAGTCAACTTTTTGATAAAAGTGAAAGATGGTATAGTATAACCCATACACCCAAAGATGATTTGTTTTATATTTAACTTTGTAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACTGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

mRNA sequence

ATGCGTTTAATCCTCCCTTCAATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACTGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

Coding sequence (CDS)

ATGCGTTTAATCCTCCCTTCAATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACTGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

Protein sequence

MRLILPSMQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEPFERDHACVVGIYRAPKKQKAAA

Homology

[Close]

BLAST of Cmc06g0171361 vs. NCBI nr
Match: XP_016903173.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo] >TYK15456.1 mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo var. makuwa])

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-36
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 8  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLE 67
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 68 PFERDHACVVGIYRAPKKQKAAA 91
          PFERDHACVVGIYRAPKKQKAAA
Sbjct: 61 PFERDHACVVGIYRAPKKQKAAA 83

[Close]

BLAST of Cmc06g0171361 vs. NCBI nr
Match: KGN57431.2 (hypothetical protein Csa_009607 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 203 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 262

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 263 FERDHACVVGIYRAPKKQKAAA 284

[Close]

BLAST of Cmc06g0171361 vs. NCBI nr
Match: XP_022922917.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 223 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 282

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 283 FERDHACVVGIYRAPKKQKAAA 304

[Close]

BLAST of Cmc06g0171361 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 224 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 283

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 284 FERDHACVVGIYRAPKKQKAAA 305

[Close]

BLAST of Cmc06g0171361 vs. NCBI nr
Match: XP_004143621.2 (probable mediator of RNA polymerase II transcription subunit 36b [Cucumis sativus] >KGN50438.1 hypothetical protein Csa_000027 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 285

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 286 FERDHACVVGIYRAPKKQKAAA 307

[Close]

BLAST of Cmc06g0171361 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 7.4e-32
Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFK  EQVTLEP
Sbjct: 237 QARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEP 296

Query: 69  FERDHACVVGIYRAPKKQKAA 90
           FERDHACVVG YR PKK KAA
Sbjct: 297 FERDHACVVGGYRMPKKPKAA 317

[Close]

BLAST of Cmc06g0171361 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 8.2e-31
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFK  EQVTLEP
Sbjct: 226 QARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEP 285

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVG YR PKKQK  A
Sbjct: 286 FERDHACVVGGYRMPKKQKTPA 307

[Close]

BLAST of Cmc06g0171361 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.0e-25
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           Q RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ K  EQ+TLEP
Sbjct: 268 QGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEP 327

Query: 69  FERDHACVVGIYRAPKKQ 87
           +ERDHA VVG+YR P KQ
Sbjct: 328 YERDHAVVVGVYRPPPKQ 345

[Close]

BLAST of Cmc06g0171361 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 8.8e-25
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           Q RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFA+EV K++AD+ K  EQ+TLEP
Sbjct: 267 QGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEP 326

Query: 69  FERDHACVVGIYRAPKKQ 87
           +ERDHA VVG+YR P KQ
Sbjct: 327 YERDHAVVVGVYRPPPKQ 344

[Close]

BLAST of Cmc06g0171361 vs. ExPASy Swiss-Prot
Match: P35549 (rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major OX=5664 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNA  FL+ GGH+VISIKANCIDST+ A  V ASE+NKLK D+ K  EQV+LEP
Sbjct: 218 QARILALNAQAFLQNGGHYVISIKANCIDSTLEAPVVIASELNKLKKDKLKPLEQVSLEP 277

Query: 69  FERDHACVVGIYRAPKKQK 88
           FERDHA VVG+YR  KK K
Sbjct: 278 FERDHAVVVGVYRPVKKSK 296

[Close]

BLAST of Cmc06g0171361 vs. ExPASy TrEMBL
Match: A0A5D3CYG2 (Mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00260 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 8  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLE 67
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 68 PFERDHACVVGIYRAPKKQKAAA 91
          PFERDHACVVGIYRAPKKQKAAA
Sbjct: 61 PFERDHACVVGIYRAPKKQKAAA 83

[Close]

BLAST of Cmc06g0171361 vs. ExPASy TrEMBL
Match: A0A1S4E4L3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103502201 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 8  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLE 67
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 68 PFERDHACVVGIYRAPKKQKAAA 91
          PFERDHACVVGIYRAPKKQKAAA
Sbjct: 61 PFERDHACVVGIYRAPKKQKAAA 83

[Close]

BLAST of Cmc06g0171361 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 223 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 282

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 283 FERDHACVVGIYRAPKKQKAAA 304

[Close]

BLAST of Cmc06g0171361 vs. ExPASy TrEMBL
Match: A0A0A0L9V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 285

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 286 FERDHACVVGIYRAPKKQKAAA 307

[Close]

BLAST of Cmc06g0171361 vs. ExPASy TrEMBL
Match: A0A0A0KLF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFK TEQVTLEP
Sbjct: 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 285

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 286 FERDHACVVGIYRAPKKQKAAA 307

[Close]

BLAST of Cmc06g0171361 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 137.5 bits (345), Expect = 5.3e-33
Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFK  EQVTLEP
Sbjct: 237 QARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEP 296

Query: 69  FERDHACVVGIYRAPKKQKAA 90
           FERDHACVVG YR PKK KAA
Sbjct: 297 FERDHACVVGGYRMPKKPKAA 317

[Close]

BLAST of Cmc06g0171361 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 134.0 bits (336), Expect = 5.8e-32
Identity = 68/82 (82.93%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFK  EQVTLEP
Sbjct: 226 QARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEP 285

Query: 69  FERDHACVVGIYRAPKKQKAAA 91
           FERDHACVVG YR PKKQK  A
Sbjct: 286 FERDHACVVGGYRMPKKQKTPA 307

[Close]

BLAST of Cmc06g0171361 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-20
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 9   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKLTEQVTLEP 68
           QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ + TE + L+ 
Sbjct: 216 QANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDS 275

Query: 69  FERDHACVVGIYRAPKK 86
            E  HACV G YR P+K
Sbjct: 276 CEEKHACVFGGYRLPRK 292

The following BLAST results are available for this feature:

BLAST of Cmc06g0171361 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903173.1	3.7e-36	98.80	PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis...	[more]
KGN57431.2	1.1e-35	98.78	hypothetical protein Csa_009607 [Cucumis sativus]	[more]
XP_022922917.1	1.1e-35	98.78	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita mosc...	[more]
XP_023552409.1	1.1e-35	98.78	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]
XP_004143621.2	1.1e-35	98.78	probable mediator of RNA polymerase II transcription subunit 36b [Cucumis sativu...	[more]

BLAST of Cmc06g0171361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH9	7.4e-32	85.19	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q9FEF8	8.2e-31	82.93	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	4.0e-25	71.79	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	8.8e-25	70.51	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P35549	2.0e-24	72.15	rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major OX=5664 PE=3 SV=1	[more]

BLAST of Cmc06g0171361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYG2	1.8e-36	98.80	Mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo var...	[more]
A0A1S4E4L3	1.8e-36	98.80	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]
A0A6J1JA27	5.2e-36	98.78	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A0A0L9V7	5.2e-36	98.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1	[more]
A0A0A0KLF9	5.2e-36	98.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1	[more]

BLAST of Cmc06g0171361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25630.1	5.3e-33	85.19	fibrillarin 2	[more]
AT5G52470.1	5.8e-32	82.93	fibrillarin 1	[more]
AT5G52490.1	8.7e-20	59.74	Fibrillarin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 59..80 score: 58.77 coord: 7..36 score: 61.9
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 1..82 e-value: 1.6E-10 score: -17.4
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 7..81 e-value: 1.7E-27 score: 96.0
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 4..82 e-value: 2.9E-25 score: 90.8
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 8..89
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 8..89
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 10..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0171361.1	Cmc06g0171361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031428	box C/D RNP complex
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity