Cmc06g0170681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0170681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Polygalacturonase
Location	CMiso1.1chr06: 26047599 .. 26050984 (-)
RNA-Seq Expression	Cmc06g0170681
Synteny	Cmc06g0170681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTTCTTCTTACAAAATCTCTCCACAATCTGACACACTTTGCAACAAAAATGGCTCTTCATACAACAACTTCTTTTCTTCTCTCATCACTACTACTACTACCCATTATGTTCTTCAATTTAACTGCTTTTGCCGATCCGATAACATTCGACATTCTCAATTTTGGAGACAAACTTGAATCCTTTGCCGCTCCGATAACATTCAACGTTGTCGATTTCGGGGCAAAACCTAACAACATAAAAATCGACTCATCCAAGGCCTTCGAATCCGCATGGAAGCAGGCTTGTAGCTCTTCTAGAGCAGCTACCATTTATGTGCCTAAGGCCAAATTCTACATTTATAGTGCAACTTTTAAAGGGCCATGCAAAAATAATGTCATTACTTTACAAATGGATGGCACTCTGGTGGCTCCCCCAAATTTCCATCTCACTGCCCAATCTAAAACTTGGATCATTTTTCGTCAGGTTAATGGAGTTACTGTGTTGGGCGGTGTTATTGATGGTCAAGGAAGTGAACTTTGGGCTTGCAAACACTCTGGCAAGACATGCCCTCGTGGAACCACAGTATGCAAATTAAAGAATTTACTAATCTTATCTGCCAAATATACTTTGTCACACCCACACATATATTTATGCTAAAATTATAAACCATAACTTAAACTAAACTAATCTACACCATGAACTATTATAACTCAAACTATAATAGTTTAGGACTATATTAATTCACTTCTTGCCTTAGGCACCTTCTAAAAGTGTGTTTCAGGATTTTTTTTTTTTATTTTAAAGTTAACAAATCTCAATCTATCTAAAAAATGCACCTTACTTTATTTATCCAAATGTCATTAGACATATTTACTTAATTTTTCTTAAACTAAAAATATTTAATATTAATTTTAGGGTAATTATAATAGGTAGCAATTTTTAGAATAATTATTAAGTATGTAGCAATATTTTAAAAAAATTGCAAATATAGCAAAATCTATCAGTGATACACTTCTATCGTTGATAGACTCTTATGGTTTATCAGTGATAGACCAACATTTGCTACATGGTCTATCGATGATAGACTCCTATCATTGATAGATTTTGACAGATTTTGCTATATTTGCAATTTTTTTAAAATGTTGTTATATACTTATTTATTTTGAATATAATTGCTAAATTTGCAACTATCCCTTAATTTTAACATTTATGGTATATTTATGGTATGCATATAAGGTGTATCGAATTAATCAAATATATATCAAATGATATATTGAGATGTATCAATTAGATTAGATTAGTTTTTTTTTTTTTTTTGTCATAATTAAAGAAATGGAAAAAAAAAATGTGCGACAAGTTTAATATCTAAACTTAAATTGTGATGCACTGTAACTTTCAAAATATATTATCGTATACTAAATTTATTATTATTTTTAAAGAATCATATACCAAATTAACTTATAATTGGAAAAGTTGATGTACTTTCATTTTTATTAAAACAACTATTTCATCCTACACTATTTTGTTTTTTGAAACAACTTGTTGGAAGGTGATATTGGCACTTTTTATTCGATATATACTAACAGGTAACAATTCATTTAAATTGAAATTATTAAACATTATTATTGTCATATATATATATATACACACTTTATTCCTTTCCTCTACAAACTTTTGTTCACACACTGAAACACAACTGTTTTGTTTTATTTCGTTTTGTGCAGTCACTACAATTTACCAATTCACAAAACATAGTGATCAGTGGATTAACATCACTGAATAGCCAAATATATCACATAGTCATAAATAAATGCCGTAATGTAAGAATGGAAAGACTAAACATCTATGCCCCTGCCAATAGTCCAAATACTGATGGAATTGATTTAGAAGAAACATCTTATGTGACCATCCTCGACTCTAATATCGGCACCGGTGACGACTGCATTTCAGTAGGCCCTGGCACCTCTAACGTGTTGATCCAGAATATTTATTGTGGACCTGGCCATGGAATTAGGTATATAGATTCTTGTTGATCTTTTTATCAATTATTTGGATGGTTTGTTTATTTATGGTTGATATAATTCAAATTTGATTTGGTTTCATTGGTGCAGCATTGGAAGTTTAGGAAGAAAGGAGAGAGAGAATGGGGTCCAGAATGTGACGGTTCAGTCATGTAGACTCAAAAAAACTCAAAATGGAGTGAGAATAAAAAGTTGGGGAAGGCCCAGTACTGGATTTGCAACAAACATTCGTTTTCAACATATCACAATGACTGATGTCAAAAACCCTATCGTCATCAATCAAAATTATTGTCCCCATAATCAAGGTTGCCCTGGAAAGGTATGCAATCGTACCGTTCTTAATTCTTTTTTTCTTTACTTATTGCATTTGACTCACACATCATCTTTTCTACAAAATATTATTTCCTGAAACGTAAATAAAAATATCAAATTCCAACTAAGATAACTATAACCTTCCACTTATAAAAAACATAATGAACTTTGAAAAAAAAAAATCCAAATTAACTAATTTATCGAAATTCTCTCTTATACAAAAAAGGTATAGATATTAACTACTTCATTTATTATAGTTTATTCAATTAAATACTTCCAAACTTTGTCAACCCTACAACTATTTTATAAACTATATATGTGTGTATGTTTGGATATATATCTGTATGTATAAGTATGTATAAACTAAATTGTAAATTTGTAAATTTATATATGGATATATATTCTATTTGTAAATTTACTCTAAATACTAAATTGTAACAAATTAAAAAAAATAAATAGAAACTAAAATTATTACATATAGTTCAATAACTAAATTGTCGTAAATGTAAGAAATAGGGATTGTGACTCGATTGTTAATTAAATACTCCGATAAATTTTAACAAATCAAAAACAAGTATTATATATTATTTACTTTTATATTGAAAATTTAGGAAAAGAAACTATATGTATATGTGTTAAAAAGGGATTTTTTTTTTCAAAAATAGAAAGAAAAAAACACAAAATTTATTACTTTGATTTTTTAATATGAATTGAATTTATAAATATTTTGTGAAATTAATGAAATTCTTTTATAAATTAGATAGAAGTTAGAATAAGTGATGTTGTTATAATAAAGTTAAAGTAAATTGAGTTTGTTTGTAAATAAATAGGAATCTGGAATTAAAATTAGCGATGTGACGTACAAATCAATTTACGGGACATCGGCGTCGTTGGTGGCCATCAAATTGGATTGTAGCCCCAAATTTCCATGCAAGGGAATAGTGTTGGAGAATGTTCAACTAACCTACAAGAATGGAAATGCCAAAGCTTCATGTATCAACGCTCAAGGCTCTACTGTTGACATGGTTGAGCCCATGGGTTGCTTTGAAGAATTTTTAAGCTCTATATAA

mRNA sequence

TCTTTTTCTTCTTACAAAATCTCTCCACAATCTGACACACTTTGCAACAAAAATGGCTCTTCATACAACAACTTCTTTTCTTCTCTCATCACTACTACTACTACCCATTATGTTCTTCAATTTAACTGCTTTTGCCGATCCGATAACATTCGACATTCTCAATTTTGGAGACAAACTTGAATCCTTTGCCGCTCCGATAACATTCAACGTTGTCGATTTCGGGGCAAAACCTAACAACATAAAAATCGACTCATCCAAGGCCTTCGAATCCGCATGGAAGCAGGCTTGTAGCTCTTCTAGAGCAGCTACCATTTATGTGCCTAAGGCCAAATTCTACATTTATAGTGCAACTTTTAAAGGGCCATGCAAAAATAATGTCATTACTTTACAAATGGATGGCACTCTGGTGGCTCCCCCAAATTTCCATCTCACTGCCCAATCTAAAACTTGGATCATTTTTCGTCAGGTTAATGGAGTTACTGTGTTGGGCGGTGTTATTGATGGTCAAGGAAGTGAACTTTGGGCTTGCAAACACTCTGGCAAGACATGCCCTCGTGGAACCACATCACTACAATTTACCAATTCACAAAACATAGTGATCAGTGGATTAACATCACTGAATAGCCAAATATATCACATAGTCATAAATAAATGCCGTAATGTAAGAATGGAAAGACTAAACATCTATGCCCCTGCCAATAGTCCAAATACTGATGGAATTGATTTAGAAGAAACATCTTATGTGACCATCCTCGACTCTAATATCGGCACCGGTGACGACTGCATTTCAGTAGGCCCTGGCACCTCTAACGTGTTGATCCAGAATATTTATTGTGGACCTGGCCATGGAATTAGCATTGGAAGTTTAGGAAGAAAGGAGAGAGAGAATGGGGTCCAGAATGTGACGGTTCAGTCATGTAGACTCAAAAAAACTCAAAATGGAGTGAGAATAAAAAGTTGGGGAAGGCCCAGTACTGGATTTGCAACAAACATTCGTTTTCAACATATCACAATGACTGATGTCAAAAACCCTATCGTCATCAATCAAAATTATTGTCCCCATAATCAAGGTTGCCCTGGAAAGGAATCTGGAATTAAAATTAGCGATGTGACGTACAAATCAATTTACGGGACATCGGCGTCGTTGGTGGCCATCAAATTGGATTGTAGCCCCAAATTTCCATGCAAGGGAATAGTGTTGGAGAATGTTCAACTAACCTACAAGAATGGAAATGCCAAAGCTTCATGTATCAACGCTCAAGGCTCTACTGTTGACATGGTTGAGCCCATGGGTTGCTTTGAAGAATTTTTAAGCTCTATATAA

Coding sequence (CDS)

ATGGCTCTTCATACAACAACTTCTTTTCTTCTCTCATCACTACTACTACTACCCATTATGTTCTTCAATTTAACTGCTTTTGCCGATCCGATAACATTCGACATTCTCAATTTTGGAGACAAACTTGAATCCTTTGCCGCTCCGATAACATTCAACGTTGTCGATTTCGGGGCAAAACCTAACAACATAAAAATCGACTCATCCAAGGCCTTCGAATCCGCATGGAAGCAGGCTTGTAGCTCTTCTAGAGCAGCTACCATTTATGTGCCTAAGGCCAAATTCTACATTTATAGTGCAACTTTTAAAGGGCCATGCAAAAATAATGTCATTACTTTACAAATGGATGGCACTCTGGTGGCTCCCCCAAATTTCCATCTCACTGCCCAATCTAAAACTTGGATCATTTTTCGTCAGGTTAATGGAGTTACTGTGTTGGGCGGTGTTATTGATGGTCAAGGAAGTGAACTTTGGGCTTGCAAACACTCTGGCAAGACATGCCCTCGTGGAACCACATCACTACAATTTACCAATTCACAAAACATAGTGATCAGTGGATTAACATCACTGAATAGCCAAATATATCACATAGTCATAAATAAATGCCGTAATGTAAGAATGGAAAGACTAAACATCTATGCCCCTGCCAATAGTCCAAATACTGATGGAATTGATTTAGAAGAAACATCTTATGTGACCATCCTCGACTCTAATATCGGCACCGGTGACGACTGCATTTCAGTAGGCCCTGGCACCTCTAACGTGTTGATCCAGAATATTTATTGTGGACCTGGCCATGGAATTAGCATTGGAAGTTTAGGAAGAAAGGAGAGAGAGAATGGGGTCCAGAATGTGACGGTTCAGTCATGTAGACTCAAAAAAACTCAAAATGGAGTGAGAATAAAAAGTTGGGGAAGGCCCAGTACTGGATTTGCAACAAACATTCGTTTTCAACATATCACAATGACTGATGTCAAAAACCCTATCGTCATCAATCAAAATTATTGTCCCCATAATCAAGGTTGCCCTGGAAAGGAATCTGGAATTAAAATTAGCGATGTGACGTACAAATCAATTTACGGGACATCGGCGTCGTTGGTGGCCATCAAATTGGATTGTAGCCCCAAATTTCCATGCAAGGGAATAGTGTTGGAGAATGTTCAACTAACCTACAAGAATGGAAATGCCAAAGCTTCATGTATCAACGCTCAAGGCTCTACTGTTGACATGGTTGAGCCCATGGGTTGCTTTGAAGAATTTTTAAGCTCTATATAA

Protein sequence

MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI

Homology

[Close]

BLAST of Cmc06g0170681 vs. NCBI nr
Match: NP_001284460.1 (polygalacturonase-like precursor [Cucumis melo] >AAC26511.1 polygalacturonase precursor [Cucumis melo])

HSP 1 Score: 857.4 bits (2214), Expect = 5.0e-245
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60
           MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP
Sbjct: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60

Query: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120
           NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA
Sbjct: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120

Query: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180
           PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN
Sbjct: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180

Query: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240
           IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT
Sbjct: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240

Query: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300
           GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI
Sbjct: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300

Query: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360
           KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG
Sbjct: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360

Query: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFL 420
           TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFL
Sbjct: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFL 420

Query: 421 SSI 424
           SSI
Sbjct: 421 SSI 423

[Close]

BLAST of Cmc06g0170681 vs. NCBI nr
Match: KAA0060589.1 (polygalacturonase-like precursor [Cucumis melo var. makuwa] >TYK02282.1 polygalacturonase-like precursor [Cucumis melo var. makuwa])

HSP 1 Score: 827.0 bits (2135), Expect = 7.3e-236
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 20  MFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQAC 79
           MFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQAC
Sbjct: 1   MFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQAC 60

Query: 80  SSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQV 139
           SSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQV
Sbjct: 61  SSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQV 120

Query: 140 NGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVIN 199
           NGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVIN
Sbjct: 121 NGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVIN 180

Query: 200 KCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNI 259
           KCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNI
Sbjct: 181 KCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNI 240

Query: 260 YCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHI 319
           YCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHI
Sbjct: 241 YCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHI 300

Query: 320 TMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCK 379
           TMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCK
Sbjct: 301 TMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCK 360

Query: 380 GIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI 424
           GIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI
Sbjct: 361 GIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI 404

[Close]

BLAST of Cmc06g0170681 vs. NCBI nr
Match: XP_004133718.1 (polygalacturonase [Cucumis sativus] >KAE8650186.1 hypothetical protein Csa_011530 [Cucumis sativus])

HSP 1 Score: 696.4 bits (1796), Expect = 1.5e-196
Identity = 345/429 (80.42%), Postives = 384/429 (89.51%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLE-SFAAPITFNVVDFGAK 60
           M LH TT FLLSS LLLPIMFF+LTAFAD +TF+ILN G K + S AA +TFNVVD+GAK
Sbjct: 1   MTLH-TTYFLLSS-LLLPIMFFSLTAFADTLTFNILNCGAKPDGSIAASLTFNVVDYGAK 60

Query: 61  PNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLV 120
           P+N K DS+KAF+SAW  ACSSS+AATIYVPKAKFYI SATF GPCKNN ITL+MDGTLV
Sbjct: 61  PDNTKFDSAKAFQSAWTHACSSSKAATIYVPKAKFYISSATFNGPCKNNAITLKMDGTLV 120

Query: 121 APPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQ 180
           AP NF LTAQSK WI+FRQVNGVTV GGVIDGQGS LWACK SGKTCPRGTTSL+FTNSQ
Sbjct: 121 APSNFQLTAQSKNWILFRQVNGVTVSGGVIDGQGSGLWACKQSGKTCPRGTTSLEFTNSQ 180

Query: 181 NIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIG 240
           NI+ISGLTSLNSQIYHIV+NKCRNV+ME LNIYAPANSPNTDGIDLEET+Y TILDSNIG
Sbjct: 181 NILISGLTSLNSQIYHIVMNKCRNVKMESLNIYAPANSPNTDGIDLEETTYATILDSNIG 240

Query: 241 TGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVR 300
           TGDDCIS+G GT NV IQN++CGPGHGIS+GSLGRKE+ENGVQNVTVQSCRL  TQNGVR
Sbjct: 241 TGDDCISLGHGTFNVFIQNVFCGPGHGISVGSLGRKEKENGVQNVTVQSCRLSNTQNGVR 300

Query: 301 IKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIY 360
           IKSWGRPSTGF  +IRFQHITMT+VK PI+I+QNYCPH+Q CPG++SG+KIS+VTY+SIY
Sbjct: 301 IKSWGRPSTGFGRDIRFQHITMTNVKYPIIIDQNYCPHHQDCPGQDSGVKISNVTYQSIY 360

Query: 361 GTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCF--- 420
           GTSA+LVAIK+DCSPKFPCKGIVL++V+LTYKNG AKASC +AQG  VD+VEP GCF   
Sbjct: 361 GTSATLVAIKMDCSPKFPCKGIVLDDVKLTYKNGKAKASCSHAQGFDVDLVEPTGCFYSR 420

Query: 421 --EEFLSSI 424
             EEFLSSI
Sbjct: 421 ATEEFLSSI 427

[Close]

BLAST of Cmc06g0170681 vs. NCBI nr
Match: XP_031745066.1 (polygalacturonase [Cucumis sativus])

HSP 1 Score: 579.3 bits (1492), Expect = 2.7e-161
Identity = 274/416 (65.87%), Postives = 340/416 (81.73%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60
           MALHT  SFL    L + ++F NL A                  FA P+TFNV+DFG KP
Sbjct: 3   MALHTIASFLFFLTLTVLMLFNNLAA------------------FATPLTFNVLDFGTKP 62

Query: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120
           NN + DSSKA + AW  ACSSS+ ATIYVPKAKFY+ SATF GPCKNN IT+++DGTLVA
Sbjct: 63  NNAETDSSKALQLAWMHACSSSKPATIYVPKAKFYVRSATFNGPCKNNDITIRIDGTLVA 122

Query: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180
           P +F LT+ S+ WI+F  VNGVTV+GG+IDGQG++LWACK+S  TCP GTTSL+FTNSQN
Sbjct: 123 PSDFRLTSNSENWILFHNVNGVTVIGGIIDGQGTQLWACKNSANTCPSGTTSLEFTNSQN 182

Query: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240
           I+++GLTSLNSQI+HIV+N+CRNV+M+ L ++A +NSPNTDGI + ++S+VTIL+SNI T
Sbjct: 183 ILVNGLTSLNSQIFHIVVNQCRNVKMQGLKVFAASNSPNTDGIHVGDSSHVTILNSNIRT 242

Query: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300
           GDDCIS+GPG+SN+ I+N+ CGPGHGISIGSLG++ +E GVQNVTV+SC+   TQNGVRI
Sbjct: 243 GDDCISIGPGSSNLWIENVVCGPGHGISIGSLGKELKEKGVQNVTVKSCKFMDTQNGVRI 302

Query: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360
           KSWGR S+GFA +IRFQH+TMT+V+NPI+I+QNYCPHNQGCPG+ SG+ +SDV YK+I+G
Sbjct: 303 KSWGRQSSGFAKDIRFQHLTMTNVQNPIIIDQNYCPHNQGCPGQSSGVTVSDVKYKNIHG 362

Query: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCF 417
           TSA+ VAIK DCSPKFPCKGI LE+V+L+YKN  AKASC NAQG  V +V+PMGCF
Sbjct: 363 TSATPVAIKFDCSPKFPCKGIKLEDVKLSYKNQVAKASCSNAQGFDVGLVQPMGCF 400

[Close]

BLAST of Cmc06g0170681 vs. NCBI nr
Match: XP_008448091.1 (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 575.1 bits (1481), Expect = 5.0e-160
Identity = 274/417 (65.71%), Postives = 335/417 (80.34%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60
           MALH  TSFLL S L + ++F NL A                  F  P+TFNVVDFG KP
Sbjct: 1   MALHAITSFLLFSTLTVLMLFNNLAA------------------FPTPLTFNVVDFGTKP 60

Query: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120
           NN + DSSKA + AW  ACSSS+ ATIYVPKAKFY+ SATF GPCKNN IT+++DG L+A
Sbjct: 61  NNAETDSSKALQLAWMHACSSSKPATIYVPKAKFYVRSATFNGPCKNNHITIRIDGALMA 120

Query: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180
           P +FHLT+ S+ WI+F  VNGVTVLGG++DGQG++LWACK+S  TCPRGTTSL+FTNSQN
Sbjct: 121 PSDFHLTSNSENWILFHNVNGVTVLGGILDGQGTQLWACKNSANTCPRGTTSLEFTNSQN 180

Query: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240
           I+++GLT+LNSQ+YHIV+N+CRNV+M+ L + A  NSPNTDGI + ++S+VTIL++NI T
Sbjct: 181 ILVNGLTALNSQLYHIVVNQCRNVKMQGLKVSAAGNSPNTDGIHVGDSSHVTILNTNIRT 240

Query: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300
           GDDCIS+GPG+SN+ I+NI CGPGHGISIGSL +  +E GVQNVTV+SC+   TQNGVRI
Sbjct: 241 GDDCISIGPGSSNLWIENIACGPGHGISIGSLAKDFKEKGVQNVTVKSCKFMDTQNGVRI 300

Query: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360
           KSWGR S GFA NIRFQH+TMT+V+NPI+I+QNYCPHNQGCPG+ SG+ +SDV Y  I G
Sbjct: 301 KSWGRQSIGFARNIRFQHLTMTNVQNPIIIDQNYCPHNQGCPGQSSGVAVSDVKYTDIRG 360

Query: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFE 418
           TSA+ VAIK DCSPKFPCKGI LE+V+L+YKN  AKASC NAQG  V +V+PMGCF+
Sbjct: 361 TSATPVAIKFDCSPKFPCKGIKLEDVKLSYKNQVAKASCSNAQGLNVGVVQPMGCFK 399

[Close]

BLAST of Cmc06g0170681 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 1.8e-128
Identity = 215/373 (57.64%), Postives = 284/373 (76.14%), Query Frame = 0


Query: 44  SFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKG 103
           + A+P+T+NV   GAK +  K DS+KAF SAW +AC+S     IYVP   F++    F G
Sbjct: 21  AIASPLTYNVASLGAKADG-KTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSG 80

Query: 104 PCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKH-S 163
           PCKNN IT ++ GTLVAP ++ +   +  WI F  VNGVT+ GG++DGQG+ LWACK   
Sbjct: 81  PCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACH 140

Query: 164 GKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDG 223
           G++CP G T+L F++S NIV+SGL SLNSQ++HIVIN  +NV+M+ + +    NSPNTDG
Sbjct: 141 GESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDG 200

Query: 224 IDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQ 283
           I ++ +S VTIL+S I TGDDC+S+GPGTSN+ I+ + CGPGHGISIGSLG+++ E GVQ
Sbjct: 201 IHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQ 260

Query: 284 NVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCP 343
           NVTV++     TQNG+RIKSWGRPSTGFA NI FQH TM +V+NPIVI+Q+YCP N+GCP
Sbjct: 261 NVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCP 320

Query: 344 GKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINA 403
           G+ SG++ISDVTY+ I+GTSA+ VA+K DCSPK PC+ I LE+V+LTYKN  A++SC +A
Sbjct: 321 GQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCSHA 380

Query: 404 QGSTVDMVEPMGC 416
            G+T  +V+P  C
Sbjct: 381 DGTTEGVVQPTSC 392

[Close]

BLAST of Cmc06g0170681 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.3e-107
Identity = 204/402 (50.75%), Postives = 271/402 (67.41%), Query Frame = 0


Query: 20  MFFNLTAFADPITFDILNFGDKLESFAAPI--TFNVVDFGAKPNNIKIDSSKAFESAWKQ 79
           M +N +    P+   IL+F   + S A PI  T NV+ +GAKP+  K DS+KAF +AW  
Sbjct: 1   MVYNTSCLILPLALIILDF-TLISSLAHPIPSTLNVLSYGAKPDGSK-DSTKAFLAAWDV 60

Query: 80  ACSSSRAATIYVPKAKFYIYSATFKG-PCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIF 139
           AC+S+   TI VPK +F + +  F G  CK   I++++ G++VAP +F + A SK WI F
Sbjct: 61  ACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWF 120

Query: 140 RQVNGVTVLGGVIDGQGSELWACKHS-GKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYH 199
             V  V++ GG++D QG+ LW CK++ G  CP G  SL F+ S NI ISGLTS+NSQ +H
Sbjct: 121 EDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFH 180

Query: 200 IVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVL 259
           IVI+   NV ++ + + A  NSPNTDGI +E +  V I +S IGTGDDCIS+GPG++NV 
Sbjct: 181 IVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVF 240

Query: 260 IQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIR 319
           IQ I CGPGHGISIGSLGR E E GV NVTV +     T NGVRIK+WG+ S  FA NI 
Sbjct: 241 IQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIV 300

Query: 320 FQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPK 379
           FQHI M  VKNPI+I+Q+YC H + CP +ESG+K+S+V Y+ I+GTS + VA+ LDCS +
Sbjct: 301 FQHINMKMVKNPIIIDQHYCLH-KPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKE 360

Query: 380 FPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFE 418
            PC GIV+++V L   +  A+ASC NA GS  D+V    C +
Sbjct: 361 KPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCLK 399

[Close]

BLAST of Cmc06g0170681 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 2.2e-78
Identity = 159/385 (41.30%), Postives = 225/385 (58.44%), Query Frame = 0


Query: 39  GDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYS 98
           G K+         +V   GAK ++ K D S AF +AWK+AC++   +TI VPK ++ + S
Sbjct: 58  GAKVSGAKPGAAVDVKASGAKGDS-KTDDSAAFAAAWKEACAA--GSTITVPKGEYMVES 117

Query: 99  ATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLG--GVIDGQGSEL 158
             FKGPCK  V TL+++G   AP     T     WI F  +   T+ G   + DGQGS  
Sbjct: 118 LEFKGPCKGPV-TLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLA 177

Query: 159 WACKHSGKT--CPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAP 218
           W      KT  C     +++FT   N  I+ +TS NS+++H+ I  C+N+ +  + I AP
Sbjct: 178 WKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAP 237

Query: 219 ANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGR 278
             S NTDGI +  ++ V ++ + I TGDDC+S+G GT N++++N+ CGPGHGISIGSLGR
Sbjct: 238 PESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGR 297

Query: 279 KERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNY 338
              E  V+ VTV+ C +K T NGVRIK+W     G A+NI F+ ITM +V  P++I+Q Y
Sbjct: 298 YPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEY 357

Query: 339 CPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTY--KN 398
           CP+     G  S +K+SDVT K I GTSA+ VA+KL CS   PC  I L ++ L +  K 
Sbjct: 358 CPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKE 417

Query: 399 GNAKASCINAQGSTVDMVEPMGCFE 418
           G A ++C N +      + P  C E
Sbjct: 418 GPAVSACSNIKPILSGKLVPAACTE 438

[Close]

BLAST of Cmc06g0170681 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.5e-77
Identity = 162/375 (43.20%), Postives = 228/375 (60.80%), Query Frame = 0


Query: 50  TFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNV 109
           T NV DFGAK +    D +KAFE AWK ACSS+ +A + VPK  + +   +F GPCK+  
Sbjct: 89  TVNVDDFGAKGDG--RDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSG- 148

Query: 110 ITLQMDGTLVAPPN-FHLTAQSKTWIIFRQVNGVTVL-GGVIDGQGSELW--ACK-HSGK 169
           +T+Q+ GT+ A  +        + W++F  V  + V  GG I+G G   W  +CK +   
Sbjct: 149 LTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKAL 208

Query: 170 TCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGID 229
            C    T+L F  S+++++  L   N+Q  H+  + C NV+   L + AP NSPNTDGI 
Sbjct: 209 PCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIH 268

Query: 230 LEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNV 289
           +  T  + I    IGTGDDCIS+  G+  V + +I CGPGHGISIGSLG    E  V +V
Sbjct: 269 VTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDV 328

Query: 290 TVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGK 349
            V   +L  T NGVRIK+W +  +G A+NI+FQ++ M +V+NPI+I+QNYC  ++ C  +
Sbjct: 329 VVNGAKLCGTTNGVRIKTW-QGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQ 388

Query: 350 ESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNG-NAKASCINAQ 409
            S +++ +V Y++I GT AS VAI  DCS +FPC+GIVLE+V L  + G  AKA C N +
Sbjct: 389 SSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVE 448

Query: 410 GSTVDMVEPMGCFEE 419
            S   +V P  C EE
Sbjct: 449 LSETGVVSP-HCQEE 458

[Close]

BLAST of Cmc06g0170681 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 287.7 bits (735), Expect = 2.1e-76
Identity = 163/366 (44.54%), Postives = 230/366 (62.84%), Query Frame = 0


Query: 44  SFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIY-SATFK 103
           S   P T +V DFGAK +  K D ++AF +AWK+ACSS+ A  + VPK   Y+  S    
Sbjct: 61  SLRTPTTVSVSDFGAKGDG-KTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLT 120

Query: 104 GPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLG---GVIDGQGSELW-- 163
           GPC N+++T+Q+ GTL A            WI+F  VN ++V G   GV+DG G   W  
Sbjct: 121 GPC-NSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQN 180

Query: 164 ACK-HSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPAN 223
           +CK +  K C +  T+L F NS+++++  L   N+Q   I I KC NV++  + + APA+
Sbjct: 181 SCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPAD 240

Query: 224 SPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKE 283
           SPNTDGI +  T  + + +S IGTGDDCIS+  G+ NV I +I CGPGHGISIGSLG   
Sbjct: 241 SPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDN 300

Query: 284 RENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCP 343
            +  V  VTV   +L  T NGVRIK++ +  +G A+NI FQ+I M +VKNPI+I+Q+YC 
Sbjct: 301 SKAFVSGVTVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPIIIDQDYCD 360

Query: 344 HNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAK 403
            ++ C  ++S +++ +V Y+ I GTSAS  AI  +CS  +PC+GIVL+ V +  K G  K
Sbjct: 361 KSK-CTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI--KGG--K 418

[Close]

BLAST of Cmc06g0170681 vs. ExPASy TrEMBL
Match: O81245 (Polygalacturonase OS=Cucumis melo OX=3656 GN=MPG2 PE=2 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 2.4e-245
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60
           MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP
Sbjct: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60

Query: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120
           NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA
Sbjct: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120

Query: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180
           PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN
Sbjct: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180

Query: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240
           IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT
Sbjct: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240

Query: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300
           GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI
Sbjct: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300

Query: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360
           KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG
Sbjct: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360

Query: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFL 420
           TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFL
Sbjct: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFL 420

Query: 421 SSI 424
           SSI
Sbjct: 421 SSI 423

[Close]

BLAST of Cmc06g0170681 vs. ExPASy TrEMBL
Match: A0A5A7V4D4 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00900 PE=3 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 3.5e-236
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 20  MFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQAC 79
           MFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQAC
Sbjct: 1   MFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQAC 60

Query: 80  SSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQV 139
           SSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQV
Sbjct: 61  SSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQV 120

Query: 140 NGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVIN 199
           NGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVIN
Sbjct: 121 NGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVIN 180

Query: 200 KCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNI 259
           KCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNI
Sbjct: 181 KCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNI 240

Query: 260 YCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHI 319
           YCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHI
Sbjct: 241 YCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHI 300

Query: 320 TMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCK 379
           TMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCK
Sbjct: 301 TMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCK 360

Query: 380 GIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI 424
           GIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI
Sbjct: 361 GIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFEEFLSSI 404

[Close]

BLAST of Cmc06g0170681 vs. ExPASy TrEMBL
Match: A0A0A0K6Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145950 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.3e-161
Identity = 274/416 (65.87%), Postives = 340/416 (81.73%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60
           MALHT  SFL    L + ++F NL A                  FA P+TFNV+DFG KP
Sbjct: 3   MALHTIASFLFFLTLTVLMLFNNLAA------------------FATPLTFNVLDFGTKP 62

Query: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120
           NN + DSSKA + AW  ACSSS+ ATIYVPKAKFY+ SATF GPCKNN IT+++DGTLVA
Sbjct: 63  NNAETDSSKALQLAWMHACSSSKPATIYVPKAKFYVRSATFNGPCKNNDITIRIDGTLVA 122

Query: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180
           P +F LT+ S+ WI+F  VNGVTV+GG+IDGQG++LWACK+S  TCP GTTSL+FTNSQN
Sbjct: 123 PSDFRLTSNSENWILFHNVNGVTVIGGIIDGQGTQLWACKNSANTCPSGTTSLEFTNSQN 182

Query: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240
           I+++GLTSLNSQI+HIV+N+CRNV+M+ L ++A +NSPNTDGI + ++S+VTIL+SNI T
Sbjct: 183 ILVNGLTSLNSQIFHIVVNQCRNVKMQGLKVFAASNSPNTDGIHVGDSSHVTILNSNIRT 242

Query: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300
           GDDCIS+GPG+SN+ I+N+ CGPGHGISIGSLG++ +E GVQNVTV+SC+   TQNGVRI
Sbjct: 243 GDDCISIGPGSSNLWIENVVCGPGHGISIGSLGKELKEKGVQNVTVKSCKFMDTQNGVRI 302

Query: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360
           KSWGR S+GFA +IRFQH+TMT+V+NPI+I+QNYCPHNQGCPG+ SG+ +SDV YK+I+G
Sbjct: 303 KSWGRQSSGFAKDIRFQHLTMTNVQNPIIIDQNYCPHNQGCPGQSSGVTVSDVKYKNIHG 362

Query: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCF 417
           TSA+ VAIK DCSPKFPCKGI LE+V+L+YKN  AKASC NAQG  V +V+PMGCF
Sbjct: 363 TSATPVAIKFDCSPKFPCKGIKLEDVKLSYKNQVAKASCSNAQGFDVGLVQPMGCF 400

[Close]

BLAST of Cmc06g0170681 vs. ExPASy TrEMBL
Match: A0A1S3BJI1 (polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103490378 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 2.4e-160
Identity = 274/417 (65.71%), Postives = 335/417 (80.34%), Query Frame = 0


Query: 1   MALHTTTSFLLSSLLLLPIMFFNLTAFADPITFDILNFGDKLESFAAPITFNVVDFGAKP 60
           MALH  TSFLL S L + ++F NL A                  F  P+TFNVVDFG KP
Sbjct: 1   MALHAITSFLLFSTLTVLMLFNNLAA------------------FPTPLTFNVVDFGTKP 60

Query: 61  NNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVA 120
           NN + DSSKA + AW  ACSSS+ ATIYVPKAKFY+ SATF GPCKNN IT+++DG L+A
Sbjct: 61  NNAETDSSKALQLAWMHACSSSKPATIYVPKAKFYVRSATFNGPCKNNHITIRIDGALMA 120

Query: 121 PPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQN 180
           P +FHLT+ S+ WI+F  VNGVTVLGG++DGQG++LWACK+S  TCPRGTTSL+FTNSQN
Sbjct: 121 PSDFHLTSNSENWILFHNVNGVTVLGGILDGQGTQLWACKNSANTCPRGTTSLEFTNSQN 180

Query: 181 IVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGT 240
           I+++GLT+LNSQ+YHIV+N+CRNV+M+ L + A  NSPNTDGI + ++S+VTIL++NI T
Sbjct: 181 ILVNGLTALNSQLYHIVVNQCRNVKMQGLKVSAAGNSPNTDGIHVGDSSHVTILNTNIRT 240

Query: 241 GDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRI 300
           GDDCIS+GPG+SN+ I+NI CGPGHGISIGSL +  +E GVQNVTV+SC+   TQNGVRI
Sbjct: 241 GDDCISIGPGSSNLWIENIACGPGHGISIGSLAKDFKEKGVQNVTVKSCKFMDTQNGVRI 300

Query: 301 KSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYG 360
           KSWGR S GFA NIRFQH+TMT+V+NPI+I+QNYCPHNQGCPG+ SG+ +SDV Y  I G
Sbjct: 301 KSWGRQSIGFARNIRFQHLTMTNVQNPIIIDQNYCPHNQGCPGQSSGVAVSDVKYTDIRG 360

Query: 361 TSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFE 418
           TSA+ VAIK DCSPKFPCKGI LE+V+L+YKN  AKASC NAQG  V +V+PMGCF+
Sbjct: 361 TSATPVAIKFDCSPKFPCKGIKLEDVKLSYKNQVAKASCSNAQGLNVGVVQPMGCFK 399

[Close]

BLAST of Cmc06g0170681 vs. ExPASy TrEMBL
Match: A0A5A7U863 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00270 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.3e-158
Identity = 260/378 (68.78%), Postives = 320/378 (84.66%), Query Frame = 0


Query: 40  DKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSA 99
           + L +F  P+TFNVVDFG KPNN + DSSKA + AW  ACSSS+ ATIYVPKAKFY+ SA
Sbjct: 4   NNLAAFPTPLTFNVVDFGTKPNNAETDSSKALQLAWMHACSSSKPATIYVPKAKFYVRSA 63

Query: 100 TFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWAC 159
           TF GPCKNN IT+++DG L+AP +FHLT+ S+ WI+F  VNGVTVLGG++DGQG++LWAC
Sbjct: 64  TFNGPCKNNDITIRIDGALMAPSDFHLTSNSENWILFHNVNGVTVLGGILDGQGTQLWAC 123

Query: 160 KHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPN 219
           K+S  TCPRGTTSL+FTNSQNI+++GLT+LNSQ+YHIV+N+CRNV+M+ L + A  NSPN
Sbjct: 124 KNSANTCPRGTTSLEFTNSQNILVNGLTALNSQLYHIVVNQCRNVKMQGLKVSAAGNSPN 183

Query: 220 TDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKEREN 279
           TDGI + ++S+VTIL++NI TGDDCIS+GPG+SN+ I+NI CGPGHGISIGSL +  +E 
Sbjct: 184 TDGIHVGDSSHVTILNTNIRTGDDCISIGPGSSNLWIENIACGPGHGISIGSLAKDFKEK 243

Query: 280 GVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQ 339
           GVQNVTV+SC+   TQNGVRIKSWGR S GFA NIRFQH+TMT+V+NPI+I+QNYCPHNQ
Sbjct: 244 GVQNVTVKSCKFMDTQNGVRIKSWGRQSNGFARNIRFQHLTMTNVQNPIIIDQNYCPHNQ 303

Query: 340 GCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASC 399
           GCPG+ SG+ +SDV Y  I GTSA+ VAIK DCSPKFPCKGI LE+V+L+YKN  AKASC
Sbjct: 304 GCPGQSSGVAVSDVKYTDIRGTSATPVAIKFDCSPKFPCKGIKLEDVKLSYKNQVAKASC 363

Query: 400 INAQGSTVDMVEPMGCFE 418
            NAQG  V +V+PMGCF+
Sbjct: 364 SNAQGLNVGVVQPMGCFK 381

[Close]

BLAST of Cmc06g0170681 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 423.7 bits (1088), Expect = 1.7e-118
Identity = 196/367 (53.41%), Postives = 267/367 (72.75%), Query Frame = 0


Query: 50  TFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKG-PCKNN 109
           T+N++ +GAKP+  K DS+KAF   W +AC+S +  TI VPK +F + S  F G  CK  
Sbjct: 22  TYNILSYGAKPDG-KTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCKRK 81

Query: 110 VITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPR 169
            +T ++ GTLVAP ++ +  +   WI+F+ ++G++V GGV+D QG+ LW+CK SGK CP 
Sbjct: 82  SVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKNCPS 141

Query: 170 GTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEET 229
           G TS+ F +S+N+VISGLTSLNSQ++H+ IN C NV+++ + + A  NSPNTDGI ++ +
Sbjct: 142 GATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSS 201

Query: 230 SYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQS 289
           S V+IL+S I TGDDC+S+GPGT+ + I+N+ CGPGHGISIGSLG++  E GVQN+TV++
Sbjct: 202 STVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITVKT 261

Query: 290 CRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGI 349
                T+NGVRIKSW RPS GFA NIRFQH  M +V+NPIVI+QNYCP N+ CP + SGI
Sbjct: 262 ATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSGI 321

Query: 350 KISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVD 409
           KISDV +  I+GTSA+ V +KLDCS K PC GI +++V+LTY+N  A   C +A GS   
Sbjct: 322 KISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRNKPATTDCSHAGGSEAG 381

Query: 410 MVEPMGC 416
              P  C
Sbjct: 382 FQRPNSC 387

[Close]

BLAST of Cmc06g0170681 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 417.9 bits (1073), Expect = 9.5e-117
Identity = 196/364 (53.85%), Postives = 267/364 (73.35%), Query Frame = 0


Query: 50  TFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAATIYVPKAKFYIYSATFKG-PCKNN 109
           ++NV+ FGAKP+  K D++KAF + W+ AC+SSR  TI VPK +F + S TF G  CK  
Sbjct: 20  SYNVLSFGAKPDG-KTDATKAFMAVWQTACASSRPVTIVVPKGRFLLRSVTFDGSKCKPK 79

Query: 110 VITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACKHSGKTCPR 169
            +T ++DGTLVAP ++ +      WI F+ ++G+TV GGV+D +G+ LW CK SGK CP 
Sbjct: 80  PVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPS 139

Query: 170 GTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEET 229
           G T++ F +S N+V+SGLTSLNSQ++H+VIN C NV+++ + + A  NSPNTDGI ++ +
Sbjct: 140 GATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSS 199

Query: 230 SYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQS 289
           S V+I ++ I TGDDC+S+GPGT+ + I+N+ CGPGHGISIGSLG+   E+GVQNVTV++
Sbjct: 200 SSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKT 259

Query: 290 CRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKESGI 349
                T NGVRIKSW RPS+GFA NIRFQH  M +V+NPI+I+QNYCP +  CP + SGI
Sbjct: 260 VTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCP-DHDCPRQVSGI 319

Query: 350 KISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKASCINAQGSTVD 409
           KISDV +  I+GTSA+ V +KLDCS K PC GI LE+V+LTY+N  A ++C +A G    
Sbjct: 320 KISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKPAASACTHAGGIEAG 379

Query: 410 MVEP 413
             +P
Sbjct: 380 FFQP 381

[Close]

BLAST of Cmc06g0170681 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 396.0 bits (1016), Expect = 3.9e-110
Identity = 187/392 (47.70%), Postives = 268/392 (68.37%), Query Frame = 0


Query: 25  TAFADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRA 84
           +A   P+ F +L F D   S +A I FNVV FGAKP+ +  DS+ AF  AW+ AC S+ +
Sbjct: 4   SAITFPLIFTLLTFID--VSSSASIVFNVVSFGAKPDGV-TDSTAAFLKAWQGACGSAAS 63

Query: 85  ATIYVPKAKFYIYSATFKGPCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTV 144
           AT+ VP   F +   TF GPCK+  IT Q+ GT+VAP ++     S +WI+F +VN  ++
Sbjct: 64  ATVVVPTGTFLLKVITFGGPCKSK-ITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSL 123

Query: 145 LGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNV 204
           +GG  D +GS  W+C+ SG+ CP G  S+ F ++++++ISG+ S+NSQ+ H+ +N C NV
Sbjct: 124 VGGTFDARGSGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNV 183

Query: 205 RMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPG 264
            +  + + AP +SPNTDG  ++ ++ VT+  S + TGDDC+++G GT N LI  + CGPG
Sbjct: 184 AVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPG 243

Query: 265 HGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDV 324
           HG+SIGSL ++  E+GV+NVTV S     +QNGVRIKSW RPSTGF  N+ FQ++ M +V
Sbjct: 244 HGVSIGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNV 303

Query: 325 KNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLE 384
           +NPI+I+QNYCP NQGCP + SG+KI+ VTYK+I GTSA+  A+KL CS   PC GI L+
Sbjct: 304 QNPIIIDQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQ 363

Query: 385 NVQLTYKNGN-AKASCINAQGSTVDMVEPMGC 416
           +++LTY  G  A + C NA G  + +++P  C
Sbjct: 364 DIKLTYNKGTPATSLCFNAVGKNLGVIQPTSC 391

[Close]

BLAST of Cmc06g0170681 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-108
Identity = 204/402 (50.75%), Postives = 271/402 (67.41%), Query Frame = 0


Query: 20  MFFNLTAFADPITFDILNFGDKLESFAAPI--TFNVVDFGAKPNNIKIDSSKAFESAWKQ 79
           M +N +    P+   IL+F   + S A PI  T NV+ +GAKP+  K DS+KAF +AW  
Sbjct: 1   MVYNTSCLILPLALIILDF-TLISSLAHPIPSTLNVLSYGAKPDGSK-DSTKAFLAAWDV 60

Query: 80  ACSSSRAATIYVPKAKFYIYSATFKG-PCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIF 139
           AC+S+   TI VPK +F + +  F G  CK   I++++ G++VAP +F + A SK WI F
Sbjct: 61  ACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWF 120

Query: 140 RQVNGVTVLGGVIDGQGSELWACKHS-GKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYH 199
             V  V++ GG++D QG+ LW CK++ G  CP G  SL F+ S NI ISGLTS+NSQ +H
Sbjct: 121 EDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFH 180

Query: 200 IVINKCRNVRMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVL 259
           IVI+   NV ++ + + A  NSPNTDGI +E +  V I +S IGTGDDCIS+GPG++NV 
Sbjct: 181 IVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVF 240

Query: 260 IQNIYCGPGHGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIR 319
           IQ I CGPGHGISIGSLGR E E GV NVTV +     T NGVRIK+WG+ S  FA NI 
Sbjct: 241 IQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIV 300

Query: 320 FQHITMTDVKNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPK 379
           FQHI M  VKNPI+I+Q+YC H + CP +ESG+K+S+V Y+ I+GTS + VA+ LDCS +
Sbjct: 301 FQHINMKMVKNPIIIDQHYCLH-KPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKE 360

Query: 380 FPCKGIVLENVQLTYKNGNAKASCINAQGSTVDMVEPMGCFE 418
            PC GIV+++V L   +  A+ASC NA GS  D+V    C +
Sbjct: 361 KPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCLK 399

[Close]

BLAST of Cmc06g0170681 vs. TAIR 10
Match: AT1G65570.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 386.0 bits (990), Expect = 4.0e-107
Identity = 187/391 (47.83%), Postives = 258/391 (65.98%), Query Frame = 0


Query: 27  FADPITFDILNFGDKLESFAAPITFNVVDFGAKPNNIKIDSSKAFESAWKQACSSSRAAT 86
           F+  IT  + +FG     F A  + NV+ FGA PN I ++S+KAF  AW  AC    +  
Sbjct: 11  FSIVITIIMSHFG----QFDARTSLNVLSFGANPNGI-VESAKAFSDAWDAACGVEDSVV 70

Query: 87  IYVPKAKFYIY-SATFKG-PCKNNVITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTV 146
           IYVPK ++ +     F+G  CK+  ITL++DGTL+ P ++ L  + + W  F  V+ VTV
Sbjct: 71  IYVPKGRYLVSGEVRFEGESCKSREITLRIDGTLIGPQDYSLLGKKENWFSFSGVHNVTV 130

Query: 147 LGGVIDGQGSELWACKHSGKTCPRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNV 206
           LGG  D +GS LW+CK +G  CP G T+L+F +S N+ I G+ SLNSQ++HI IN+CRN+
Sbjct: 131 LGGSFDAKGSTLWSCKANGYNCPEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRNI 190

Query: 207 RMERLNIYAPANSPNTDGIDLEETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPG 266
           ++E + I AP  SPNTDGI ++ ++ + + +++I TGDDCIS+GPGT N+++  I CGPG
Sbjct: 191 KIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCGPG 250

Query: 267 HGISIGSLGRKERENGVQNVTVQSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDV 326
           HGISIGSL +   E GV+NVTV++    +T NG+RIKSW R S GF   +RF    M +V
Sbjct: 251 HGISIGSLAKSIEEQGVENVTVKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNV 310

Query: 327 KNPIVINQNYCPHNQGCPGKESGIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLE 386
             PI+I+QNYCP +  CP +ESGIKI+DV Y  I GTSA+ +AIK+DCS K PC GI ++
Sbjct: 311 SYPILIDQNYCPGDSSCPSQESGIKINDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQ 370

Query: 387 NVQLTYKNGNAKASCINAQGSTVDMVEPMGC 416
            + LT     AK SC N  G  + +V P GC
Sbjct: 371 AINLTSYGEAAKTSCTNVSGKQLGLVTPSGC 396

The following BLAST results are available for this feature:

BLAST of Cmc06g0170681 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001284460.1	5.0e-245	100.00	polygalacturonase-like precursor [Cucumis melo] >AAC26511.1 polygalacturonase pr...	[more]
KAA0060589.1	7.3e-236	100.00	polygalacturonase-like precursor [Cucumis melo var. makuwa] >TYK02282.1 polygala...	[more]
XP_004133718.1	1.5e-196	80.42	polygalacturonase [Cucumis sativus] >KAE8650186.1 hypothetical protein Csa_01153...	[more]
XP_031745066.1	2.7e-161	65.87	polygalacturonase [Cucumis sativus]	[more]
XP_008448091.1	5.0e-160	65.71	PREDICTED: polygalacturonase-like [Cucumis melo]	[more]

BLAST of Cmc06g0170681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	1.8e-128	57.64	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	2.3e-107	50.75	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
P49063	2.2e-78	41.30	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]
P35336	5.5e-77	43.20	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q8RY29	2.1e-76	44.54	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]

BLAST of Cmc06g0170681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
O81245	2.4e-245	100.00	Polygalacturonase OS=Cucumis melo OX=3656 GN=MPG2 PE=2 SV=1	[more]
A0A5A7V4D4	3.5e-236	100.00	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A0A0K6Z5	1.3e-161	65.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145950 PE=3 SV=1	[more]
A0A1S3BJI1	2.4e-160	65.71	polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103490378 PE=3 SV=1	[more]
A0A5A7U863	1.3e-158	68.78	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]

BLAST of Cmc06g0170681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	1.7e-118	53.41	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	9.5e-117	53.85	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	3.9e-110	47.70	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	1.6e-108	50.75	Pectin lyase-like superfamily protein	[more]
AT1G65570.1	4.0e-107	47.83	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 228..249 e-value: 2500.0 score: 4.4 coord: 281..302 e-value: 35.0 score: 13.3 coord: 311..332 e-value: 2000.0 score: 5.1 coord: 251..271 e-value: 2900.0 score: 3.9 coord: 378..404 e-value: 5500.0 score: 1.9 coord: 201..227 e-value: 830.0 score: 7.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 40..417 e-value: 3.4E-116 score: 390.6
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 79..403 e-value: 4.6E-92 score: 308.5
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 258..271
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 45..410
None	No IPR available	PANTHER	PTHR31375:SF246	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 45..410
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 44..416

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0170681.1	Cmc06g0170681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity