Cmc06g0168481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0168481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr06: 22276566 .. 22277402 (+)
RNA-Seq Expression	Cmc06g0168481
Synteny	Cmc06g0168481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTGTAAATCCATATATATAACATGGCATATAACGCCCTAAACCTCTCTACAACATCCCCACCATATTTTGTAGCTTATAAAGGCTCAAAAGGAAGTTTGTGCAGAAGAAGAGAAATTGATCAATGGAGGCAAACAAAAGAAAACTTCGAGGCTTCATGAAAGGGAAATTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGAGAGTGCTATAGTAGTGTTTCTTCTCAACACAACATTGCTTTATTGGTGCAGGATAACCCCAGTCGGGACACGACTGCCACTCGTGGCTCGTTAAGTCAGTCTGATCATTCATACGGAATTGTAGCTGACGAAGGTGTTGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCACGATTCAAAAGCTTGAATGAGTTACCTCATCCGATAGAAATGTCGTCGATTCCATTGCCCCACCAATAGATTTGAAGACCTTGTTTTATTTATGTTGGGGTTTACTACTTGATTATTATTCTAAGTGGACTTAAGCATTACTCGTGTGGTTGGACATAGAGTTTCTCTTACGTATATAGTAGGTCTGAATCTCTCATCTTTTATATATTTATAATGAAAAAAACTTGGGTGCATCTTCTCATACATGCTTCCTATTTCTCTTCCATACCAAAATAAACTTATCAAATATTTATAAAAAAAATATTAATTTTCTTTTGGAGGAGAGATGTAAAGCATTTGAATGATGCACTTAATCATGATTCTTTATATATATTTTAATATTATCACAAAATTTTATGATAGCATAAACTTCCATT

mRNA sequence

CCTTGTAAATCCATATATATAACATGGCATATAACGCCCTAAACCTCTCTACAACATCCCCACCATATTTTGTAGCTTATAAAGGCTCAAAAGGAAGTTTGTGCAGAAGAAGAGAAATTGATCAATGGAGGCAAACAAAAGAAAACTTCGAGGCTTCATGAAAGGGAAATTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGATAACCCCAGTCGGGACACGACTGCCACTCGTGGCTCGTTAAGTCAGTCTGATCATTCATACGGAATTGTAGCTGACGAAGGTGTTGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCACGATTCAAAAGCTTGAATGAGTTACCTCATCCGATAGAAATGTCGTCGATTCCATTGCCCCACCAATAGATTTGAAGACCTTGTTTTATTTATGTTGGGGTTTACTACTTGATTATTATTCTAAGTGGACTTAAGCATTACTCGTGTGGTTGGACATAGAGTTTCTCTTACGTATATAGTAGGTCTGAATCTCTCATCTTTTATATATTTATAATGAAAAAAACTTGGGTGCATCTTCTCATACATGCTTCCTATTTCTCTTCCATACCAAAATAAACTTATCAAATATTTATAAAAAAAATATTAATTTTCTTTTGGAGGAGAGATGTAAAGCATTTGAATGATGCACTTAATCATGATTCTTTATATATATTTTAATATTATCACAAAATTTTATGATAGCATAAACTTCCATT

Coding sequence (CDS)

ATGGAGGCAAACAAAAGAAAACTTCGAGGCTTCATGAAAGGGAAATTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGATAACCCCAGTCGGGACACGACTGCCACTCGTGGCTCGTTAAGTCAGTCTGATCATTCATACGGAATTGTAGCTGACGAAGGTGTTGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCACGATTCAAAAGCTTGAATGAGTTACCTCATCCGATAGAAATGTCGTCGATTCCATTGCCCCACCAATAG

Protein sequence

MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPHQ

Homology

[Close]

BLAST of Cmc06g0168481 vs. NCBI nr
Match: KAA0042928.1 (hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK05327.1 hypothetical protein E5676_scaffold108G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 8.2e-42
Identity = 97/121 (80.17%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGL------------------------DNP 60
           MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGL                        DNP
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 98
           SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH
Sbjct: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 120

[Close]

BLAST of Cmc06g0168481 vs. NCBI nr
Match: KAE8650773.1 (hypothetical protein Csa_017653 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLDNPSRDTTATRGSLSQSDHSYGIVADE 60
          MEANKRKLRGFM+GKLMPFYKQYNGSKTKQTGLD+P RDTTATR SLSQ D SYGI+ADE
Sbjct: 1  MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLDDPGRDTTATRDSLSQFDRSYGIIADE 60

Query: 61 GVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPHQ 98
          GVDVKAANYISSTLARFKSLNELPHPIE+SSIPLPHQ
Sbjct: 61 GVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 97

[Close]

BLAST of Cmc06g0168481 vs. NCBI nr
Match: KAG6588895.1 (hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 59/99 (59.60%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 17 MPFYKQYNGSKTKQTGL---------------------DNPSRDTTATRGSLSQSDHSYG 76
          MPFYKQY G+KTK TGL                     +NP  DT  TR SL+Q D+ YG
Sbjct: 1  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQFDNLYG 60

Query: 77 IVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPL 95
          IVADEG+DVKAANYISSTLARFKSLNEL  PIE+ S PL
Sbjct: 61 IVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPPL 98

[Close]

BLAST of Cmc06g0168481 vs. NCBI nr
Match: XP_021648774.1 (uncharacterized protein LOC110641383 [Hevea brasiliensis])

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 43/114 (37.72%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYK---------QYNGSKTKQTGLDNPSRDTT---------- 60
           ME+N RK RGFMKGKLMPFY+         QY  SK  +    +PS  +           
Sbjct: 1   MESN-RKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 60

Query: 61  -----------------ATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 79
                            + R  L+Q D  YG+  DE VD+KAA+YISS   RFK
Sbjct: 61  APPKQNKVSFIIPPAPDSNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 113

[Close]

BLAST of Cmc06g0168481 vs. NCBI nr
Match: KAF2305060.1 (hypothetical protein GH714_001496 [Hevea brasiliensis] >KAF2305065.1 hypothetical protein GH714_001554 [Hevea brasiliensis])

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05
Identity = 43/114 (37.72%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYK---------QYNGSKTKQTGLDNPSRDTT---------- 60
           ME+N RK RGFMKGKLMPFY+         QY  SK  +    +PS  +           
Sbjct: 35  MESN-RKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 94

Query: 61  -----------------ATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 79
                            + R  L+Q D  YG+  DE VD+KAA+YISS   RFK
Sbjct: 95  APPKQNKVSFIIPPAPDSNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 147

[Close]

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL
Match: A0A5D3C0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001540 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.0e-42
Identity = 97/121 (80.17%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGL------------------------DNP 60
           MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGL                        DNP
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 98
           SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH
Sbjct: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 120

[Close]

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL
Match: A0A0A0LVE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.9e-38
Identity = 89/120 (74.17%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGL-----------------------DNPS 60
           MEANKRKLRGFM+GKLMPFYKQYNGSKTKQTGL                       D+P 
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPHQ 98
           RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIPLPHQ
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120

[Close]

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL
Match: A0A6A6LUB7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.8e-06
Identity = 43/114 (37.72%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYK---------QYNGSKTKQTGLDNPSRDTT---------- 60
           ME+N RK RGFMKGKLMPFY+         QY  SK  +    +PS  +           
Sbjct: 35  MESN-RKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 94

Query: 61  -----------------ATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 79
                            + R  L+Q D  YG+  DE VD+KAA+YISS   RFK
Sbjct: 95  APPKQNKVSFIIPPAPDSNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 147

[Close]

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL
Match: A0A067LN74 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.7e-05
Identity = 41/110 (37.27%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQ-TGLDNPSRDTTATRG-------------- 60
           ME+N RK RGFMKGKL+PFY+    + T Q +    PS+ + +                 
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPP 60

Query: 61  -----------------SLSQSDHSYGIVADEGVDVKAANYISSTLARFK 79
                             LSQ D  YG+  DEGVD+KAA YISS   RFK
Sbjct: 61  KQKVSFIVPTADSNRDKYLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL
Match: A0A7N2QZM2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04
Identity = 40/108 (37.04%), Postives = 53/108 (49.07%), Query Frame = 0


Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQ-TGLDNPSRDTTAT---------------- 60
           MEAN+ K RGF+KGKLMPFY+    S T Q T    PS+ + +T                
Sbjct: 1   MEANRGKRRGFVKGKLMPFYRAAKPSSTVQYTTKVKPSQSSPSTASVEFLVHQDYYVFAQ 60

Query: 61  -------------RGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 79
                        R  +S  D+ YG+  DE VD+K+A+YISS   RF+
Sbjct: 61  PKQKVAFIVQDNSRDLISPYDNLYGMPGDESVDMKSASYISSVQERFQ 108

The following BLAST results are available for this feature:

BLAST of Cmc06g0168481 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042928.1	8.2e-42	80.17	hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK0532...	[more]
KAE8650773.1	1.4e-41	91.75	hypothetical protein Csa_017653 [Cucumis sativus]	[more]
KAG6588895.1	1.1e-17	59.60	hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_021648774.1	1.6e-05	37.72	uncharacterized protein LOC110641383 [Hevea brasiliensis]	[more]
KAF2305060.1	1.6e-05	37.72	hypothetical protein GH714_001496 [Hevea brasiliensis] >KAF2305065.1 hypothetica...	[more]

BLAST of Cmc06g0168481 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0J6	4.0e-42	80.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LVE7	5.9e-38	74.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1	[more]
A0A6A6LUB7	7.8e-06	37.72	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1	[more]
A0A067LN74	8.7e-05	37.27	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1	[more]
A0A7N2QZM2	1.1e-04	37.04	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Cmc06g0168481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	PANTHER	PTHR36030	FAMILY NOT NAMED	coord: 47..82
None	No IPR available	PANTHER	PTHR36030	FAMILY NOT NAMED	coord: 1..31
None	No IPR available	PANTHER	PTHR36030:SF1	SUBFAMILY NOT NAMED	coord: 47..82
None	No IPR available	PANTHER	PTHR36030:SF1	SUBFAMILY NOT NAMED	coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0168481.1	Cmc06g0168481.1	mRNA