Homology
BLAST of Cmc06g0168461 vs. NCBI nr
Match:
KAA0042921.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK05321.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1752.6 bits (4538), Expect = 0.0e+00
Identity = 861/899 (95.77%), Postives = 866/899 (96.33%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCV NLTFNLVSVD
Sbjct: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVSNLTFNLVSVD 60
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY
Sbjct: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
QLHLRLGH SPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL
Sbjct: 121 QLHLRLGHVSPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL
Sbjct: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
Query: 241 IKTLCTDYALEYKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVRALILSASCPEKFWGE 300
IKTLCTDYALEYKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVRALILSASCPEKFWGE
Sbjct: 241 IKTLCTDYALEYKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVRALILSASCPEKFWGE 300
Query: 301 AALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHEHTKLEPHAR 360
AALTFVYTINRLPSSVLQNI PFEKLYGTLPNYSNLK FGCAFFILLHPHEHTKLEPHAR
Sbjct: 301 AALTFVYTINRLPSSVLQNISPFEKLYGTLPNYSNLKTFGCAFFILLHPHEHTKLEPHAR 360
Query: 361 LYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSI 420
LYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSI
Sbjct: 361 LYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSI 420
Query: 421 DLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREPPIHLQDYHF 480
DLFPLSESPLGNELAQSAPTSTTLDQSSIS GSPEPTSDTPPRR TRIREPPIHLQDYHF
Sbjct: 421 DLFPLSESPLGNELAQSAPTSTTLDQSSISDGSPEPTSDTPPRRSTRIREPPIHLQDYHF 480
Query: 481 FSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIK 540
FSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIK
Sbjct: 481 FSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIK 540
Query: 541 THSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDVK 600
THSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDVK
Sbjct: 541 THSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDVK 600
Query: 601 NDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS 660
NDFLNGTLSEKVYMKPP GTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS
Sbjct: 601 NDFLNGTLSEKVYMKPPPGTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS 660
Query: 661 PHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGL 720
PHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGL
Sbjct: 661 PHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGL 720
Query: 721 EVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPNPVSVLVGSFIYLTVTHPDIAY 780
EV RRSDGYLLSKAKC DLLAHSGI NSNTASTPLDPN ++LT
Sbjct: 721 EVFRRSDGYLLSKAKCAFDLLAHSGITNSNTASTPLDPN---------VHLTPYDGVPLE 780
Query: 781 VVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDR 840
V + KFITTPRTIHFTVVLRIL YIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDR
Sbjct: 781 DVSLYRKFITTPRTIHFTVVLRILHYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDR 840
Query: 841 RSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQL 900
RSTTGYCFYLGNSLISW+SKKQS+VSRSSTESEYRALADTTAELLWLRWLLADMGVPQL
Sbjct: 841 RSTTGYCFYLGNSLISWYSKKQSIVSRSSTESEYRALADTTAELLWLRWLLADMGVPQL 890
BLAST of Cmc06g0168461 vs. NCBI nr
Match:
KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1595.1 bits (4129), Expect = 0.0e+00
Identity = 801/922 (86.88%), Postives = 829/922 (89.91%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTS+YSLMNTPSP KSLPPIY+ADGNCMNITH+GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 330 MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+LG TVSFS NGCQVQDP+TGQTIG GRKVGRLFELLSLQVPSP SIS PVTDSDTY
Sbjct: 390 QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFSTS SI DKPFDL
Sbjct: 450 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFS
Sbjct: 510 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD ALEYKD TLLSFL SCPHTSQQN RAE KHRHILDSVRAL+LSA
Sbjct: 570 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPSSVLQNI PFE+LYGT PNYSNLK+FGCA F+LL PHE
Sbjct: 630 SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFH SFSSP
Sbjct: 690 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPLSES GNELAQSAPTS T DQSSIS G+P+P D PPRR TR+REP
Sbjct: 750 QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
PIHLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEK HTWDYVDLPPGK+PI
Sbjct: 810 PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQEYGIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 870 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYL QHFEMKDL
Sbjct: 990 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229
BLAST of Cmc06g0168461 vs. NCBI nr
Match:
TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1595.1 bits (4129), Expect = 0.0e+00
Identity = 801/922 (86.88%), Postives = 829/922 (89.91%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTS+YSLMNTPSP KSLPPIY+ADGNCMNITH+GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 330 MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+LG TVSFS NGCQVQDP+TGQTIG GRKVGRLFELLSLQVPSP SIS PVTDSDTY
Sbjct: 390 QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFSTS SI DKPFDL
Sbjct: 450 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFS
Sbjct: 510 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD ALEYKD TLLSFL SCPHTSQQN RAE KHRHILDSVRAL+LSA
Sbjct: 570 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPSSVLQNI PFE+LYGT PNYSNLK+FGCA F+LL PHE
Sbjct: 630 SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFH SFSSP
Sbjct: 690 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPLSES GNELAQSAPTS T DQSSIS G+P+P D PPRR TR+REP
Sbjct: 750 QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
PIHLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEK HTWDYVDLPPGK+PI
Sbjct: 810 PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQEYGIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 870 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYL QHFEMKDL
Sbjct: 990 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229
BLAST of Cmc06g0168461 vs. NCBI nr
Match:
KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1593.9 bits (4126), Expect = 0.0e+00
Identity = 800/922 (86.77%), Postives = 829/922 (89.91%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTS+YSLMNTPSP KSLPPIY+ADGNCMNITH+GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 330 MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+LG TVSFS NGCQVQDP+TGQTIG GRKVGRLFE+LSLQVPSP SIS PVTDSDTY
Sbjct: 390 QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSLQVPSP-SISAPVTDSDTY 449
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFSTS SI DKPFDL
Sbjct: 450 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFS
Sbjct: 510 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD ALEYKD TLLSFL SCPHTSQQN RAE KHRHILDSVRAL+LSA
Sbjct: 570 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPSSVLQNI PFE+LYGT PNYSNLK+FGCA F+LL PHE
Sbjct: 630 SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFH SFSSP
Sbjct: 690 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPLSES GNELAQSAPTS T DQSSIS G+P+P D PPRR TR+REP
Sbjct: 750 QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
PIHLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEK HTWDYVDLPPGK+PI
Sbjct: 810 PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQEYGIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 870 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYL QHFEMKDL
Sbjct: 990 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229
BLAST of Cmc06g0168461 vs. NCBI nr
Match:
TYK21532.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 1582.8 bits (4097), Expect = 0.0e+00
Identity = 795/922 (86.23%), Postives = 824/922 (89.37%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTSNYSLMNTPSP KSLPPIY+ADGNCMNITH GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 170 MTSNYSLMNTPSPTKSLPPIYAADGNCMNITHTGTINTPSLNLPHTYCVPNLTFNLVSVG 229
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+L LTVSFS NGCQVQDP+TGQTIG GRKVGRLFELLSLQVPSP SIS PVTDSDTY
Sbjct: 230 QLCDLRLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 289
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFS S SI DKPFDL
Sbjct: 290 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDL 349
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PT+TVHGYRYYVLFIDDFSRFTWIYFLKHRSELS TYIEFANMIRTQFS
Sbjct: 350 IHSDIWGPAPTTTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSHTYIEFANMIRTQFSCP 409
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD + EYKD TLLSFL SCPHTSQQN RAE KH HILDSVRAL+LSA
Sbjct: 410 IKTLRTDNSFEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHHHILDSVRALLLSA 469
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPS VLQNI PFEKLYGT PNYSNLK+FGCA F+LLHPHE
Sbjct: 470 SCPEKFWGEAALTSVYTINRLPSFVLQNISPFEKLYGTPPNYSNLKVFGCACFVLLHPHE 529
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFHTSFSSP
Sbjct: 530 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSP 589
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPL ES NELAQSAPTS T DQSSIS G+P+P+ D PPRR TR+R P
Sbjct: 590 QSFFTDTSIDLFPLPESTPDNELAQSAPTSATSDQSSISDGNPDPSPDIPPRRSTRVRAP 649
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
P HLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEKTHTWDYVDLPPGK+PI
Sbjct: 650 PSHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI 709
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQE+GIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 710 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEFGIDYEETFAPVARMTSVRSLLAVAAAKQ 769
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 770 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 829
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYL QHFEMKDL
Sbjct: 830 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 889
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 890 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 949
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 950 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1009
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1010 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1069
BLAST of Cmc06g0168461 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 554.3 bits (1427), Expect = 2.5e-156
Identity = 367/1047 (35.05%), Postives = 527/1047 (50.33%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPS----LNLPHTYCVPNLTFNL 60
+TS+++ ++ P + ADG+ + I+H G+ + + LNL + VPN+ NL
Sbjct: 341 ITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNL 400
Query: 61 VSVDQLCNL-GLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVT 120
+SV +LCN G++V F P QV+D TG + G+ L+E S ++P +
Sbjct: 401 ISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSS 460
Query: 121 DSDTYQLHLRLGHASPEKLCHLI---SINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSIS 180
+ H RLGH +P L +I S++ LN ++KF+ +C +C + K FS S
Sbjct: 461 KATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFL--SCSDCLINKSNKVPFSQSTI 520
Query: 181 ISDKPFDLIHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANM 240
S +P + I+S++W P + YRYYV+F+D F+R+TW+Y LK +S++ T+I F N+
Sbjct: 521 NSTRPLEYIYSDVWSS-PILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNL 580
Query: 241 IRTQFSYLIKTLCTDYALE-------YKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVR 300
+ +F I T +D E + + + S PHT + N +E KHRHI+++
Sbjct: 581 LENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGL 640
Query: 301 ALILSASCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFI 360
L+ AS P+ +W A VY INRLP+ +LQ PF+KL+GT PNY L++FGCA +
Sbjct: 641 TLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYP 700
Query: 361 LLHPHEHTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWE----------- 420
L P+ KL+ +R FLGY + C +RL ISR+V F E
Sbjct: 701 WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLAT 760
Query: 421 -----------------HTMF------------------------------------SRL 480
HT S L
Sbjct: 761 LSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNL 820
Query: 481 -SSFHTSFSS-----------PQPFFTDTSIDL-----------FPLSESPLGNELAQSA 540
SSF +SF S PQP T P +ESP ++LAQS
Sbjct: 821 DSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESP--SQLAQSL 880
Query: 541 PT---STTLDQSSISYGSPEPTSDTPPRRFTRIREPPIHLQ------------------- 600
T S++ S + S TS TPP I PP Q
Sbjct: 881 STPAQSSSSSPSPTTSASSSSTSPTPPS--ILIHPPPPLAQIVNNNNQAPLNTHSMGTRA 940
Query: 601 ---------DYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPG 660
Y ++ + EP + +A D W+ AM E++A HTWD V PP
Sbjct: 941 KAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPS 1000
Query: 661 KKPI-GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAV 720
I GC+WI+ K +SD ++ R+KARLVAKGY+Q G+DY ETF+ V TS+R +L V
Sbjct: 1001 HVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGV 1060
Query: 721 AATKQWPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSP--PHKVCLLRRALYGLKQAPRAW 780
A + WP+ Q+DV N FL GTL++ VYM P G P+ VC LR+ALYGLKQAPRAW
Sbjct: 1061 AVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAW 1120
Query: 781 FATFSSTITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQ 840
+ + + +GF +S D +LF + IV +L+YVDD++ITGNDP + + L Q
Sbjct: 1121 YVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQ 1180
Query: 841 HFEMKDLGSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPNPVSVL 897
F +KD L+YFLG+E R G LS+ + DLLA + +I + +TP+ P+P L
Sbjct: 1181 RFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSL 1240
BLAST of Cmc06g0168461 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 545.0 bits (1403), Expect = 1.5e-153
Identity = 358/1048 (34.16%), Postives = 530/1048 (50.57%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTP----SLNLPHTYCVPNLTFNL 60
+TS+++ ++ P + ADG+ + ITH G+ + P SL+L VPN+ NL
Sbjct: 320 ITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNL 379
Query: 61 VSVDQLCNLG-LTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVT 120
+SV +LCN ++V F P QV+D TG + G+ L+E + S ++P +
Sbjct: 380 ISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCS 439
Query: 121 DSDTYQLHLRLGHASPEKLCHLISINH----LNSTNKFVPFNCLNCKLAKQPAWSFSTSI 180
+ H RLGH S L +IS NH LN ++K + +C +C + K FS S
Sbjct: 440 KATHSSWHSRLGHPSLAILNSVIS-NHSLPVLNPSHKLL--SCSDCFINKSHKVPFSNST 499
Query: 181 SISDKPFDLIHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFAN 240
S KP + I+S++W P ++ YRYYV+F+D F+R+TW+Y LK +S++ T+I F +
Sbjct: 500 ITSSKPLEYIYSDVWSS-PILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKS 559
Query: 241 MIRTQFSYLIKTLCTDYALEY---KDYT----LLSFLSCPHTSQQNRRAECKHRHILDSV 300
++ +F I TL +D E+ +DY + F S PHT + N +E KHRHI++
Sbjct: 560 LVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMG 619
Query: 301 RALILSASCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFF 360
L+ AS P+ +W A VY INRLP+ +LQ PF+KL+G PNY LK+FGCA +
Sbjct: 620 LTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACY 679
Query: 361 ILLHPHEHTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWE---------- 420
L P+ KLE ++ F+GY + C RL SR+V F E
Sbjct: 680 PWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNF 739
Query: 421 ------------------HTMF--------------------------------SRLSSF 480
HT +++SS
Sbjct: 740 GVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSS 799
Query: 481 H---TSFSSP-----------------QPFFTDTSIDLFPLSESPLGNELAQSAPT-STT 540
+ +S SSP QP T S P+ +P N + ++P ++
Sbjct: 800 NLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSP 859
Query: 541 LDQSSISY-------------GSPEPTSDTPPRRFTRIREPPI----------------- 600
L QS IS SP +S + P + PPI
Sbjct: 860 LPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATR 919
Query: 601 -------HLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPP 660
Q Y + +++ + EP + +A D W++AM E++A HTWD V PP
Sbjct: 920 AKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPP 979
Query: 661 GKKPI-GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLA 720
I GC+WI+ K +SD ++ R+KARLVAKGY+Q G+DY ETF+ V TS+R +L
Sbjct: 980 PSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLG 1039
Query: 721 VAATKQWPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSP--PHKVCLLRRALYGLKQAPRA 780
VA + WP+ Q+DV N FL GTL+++VYM P G P VC LR+A+YGLKQAPRA
Sbjct: 1040 VAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRA 1099
Query: 781 WFATFSSTITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLD 840
W+ + + +GF +S D +LF + I+ +L+YVDD++ITGND + L
Sbjct: 1100 WYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALS 1159
Query: 841 QHFEMKDLGSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPL------- 897
Q F +K+ L+YFLG+E R G LS+ + T DLLA + ++ + +TP+
Sbjct: 1160 QRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLT 1219
BLAST of Cmc06g0168461 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 424.1 bits (1089), Expect = 4.0e-117
Identity = 282/825 (34.18%), Postives = 419/825 (50.79%), Query Frame = 0
Query: 123 HLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDLIH 182
H R+GH S + L L + ++ C C KQ SF TS DL++
Sbjct: 426 HKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVY 485
Query: 183 SNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYLIK 242
S++ GP+ ++ G +Y+V FIDD SR W+Y LK + ++ + + +F ++ + +K
Sbjct: 486 SDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLK 545
Query: 243 TLCTDYALEYKDYTLLSFLS---------CPHTSQQNRRAECKHRHILDSVRALILSASC 302
L +D EY + S P T Q N AE +R I++ VR+++ A
Sbjct: 546 RLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKL 605
Query: 303 PEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHEHT 362
P+ FWGEA T Y INR PS L P +YS+LK+FGC F + + T
Sbjct: 606 PKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRT 665
Query: 363 KLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQP 422
KL+ + F+GYG E G+R WDP+ ++ SR V F E + + + P
Sbjct: 666 KLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIP 725
Query: 423 -FFTDTSIDLFPLSESPLGNELAQSA--PTSTTLDQSSISYGSPE---PTSDTPPRRFTR 482
F T S P S +E+++ P + G E PT + R
Sbjct: 726 NFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLR 785
Query: 483 IREPPIHLQDYHFFSTIVSLV----EPTSYQEASTDP---LWQKAMNDELHALEKTHTWD 542
E P ++ + ST L+ EP S +E + P KAM +E+ +L+K T+
Sbjct: 786 RSERP-RVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYK 845
Query: 543 YVDLPPGKKPIGCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSV 602
V+LP GK+P+ CKW++K+K D + R+KARLV KG+ Q+ GID++E F+ V MTS+
Sbjct: 846 LVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 905
Query: 603 RSLLAVAATKQWPLLQMDVKNDFLNGTLSEKVYMKPPLG--TYSPPHKVCLLRRALYGLK 662
R++L++AA+ + Q+DVK FL+G L E++YM+ P G H VC L ++LYGLK
Sbjct: 906 RTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLK 965
Query: 663 QAPRAWFATFSSTITQLGFTSSPHD-IALFTRHTPQGIVLLLLYVDDMIITGNDPQAISD 722
QAPR W+ F S + + + D F R + ++LLLYVDDM+I G D I+
Sbjct: 966 QAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAK 1025
Query: 723 LQHYLDQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSKAKCTSDLLAHSGIINSNTASTP 782
L+ L + F+MKDLG LG+++ R S LS+ K +L + N+ STP
Sbjct: 1026 LKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTP 1085
Query: 783 LDPN---------------------PVSVLVGSFIYLTV-THPDIAYVVHIVSKFITTPR 842
L + P S VGS +Y V T PDIA+ V +VS+F+ P
Sbjct: 1086 LAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPG 1145
Query: 843 TIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNS 899
H+ V ILRY++GT G L F S +L GY++ D GD +R+S+TGY F
Sbjct: 1146 KEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGG 1205
BLAST of Cmc06g0168461 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 350.9 bits (899), Expect = 4.3e-95
Identity = 270/977 (27.64%), Postives = 442/977 (45.24%), Query Frame = 0
Query: 55 NLVSVDQLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPV 114
NL+SV +L G+++ F +G + K G + V L ++ V + + S
Sbjct: 357 NLMSVKRLQEAGMSIEFDKSGVTIS--KNGLMV-----VKNSGMLNNVPVINFQAYSINA 416
Query: 115 TDSDTYQL-HLRLGHASPEKLCHLISINHLNSTNKF--------VPFNCLNCKLAKQPAW 174
+ ++L H R GH S KL + N + + + CLN K A+ P
Sbjct: 417 KHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFK 476
Query: 175 SFSTSISISDKPFDLIHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRT 234
I +P ++HS++ GPI T+ Y+V+F+D F+ + Y +K++S++
Sbjct: 477 QLKDKTHIK-RPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSM 536
Query: 235 YIEFANMIRTQFSYLIKTLCTDYALEYKDYTLLSF---------LSCPHTSQQNRRAECK 294
+ +F F+ + L D EY + F L+ PHT Q N +E
Sbjct: 537 FQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERM 596
Query: 295 HRHILDSVRALILSASCPEKFWGEAALTFVYTINRLPSSVL--QNIYPFEKLYGTLPNYS 354
R I + R ++ A + FWGEA LT Y INR+PS L + P+E + P
Sbjct: 597 IRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLK 656
Query: 355 NLKIFGCAFFILLHPHEHTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWE 414
+L++FG ++ + ++ K + + F+GY E GF+ WD + + ++R V E
Sbjct: 657 HLRVFGATVYVHI-KNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDE 716
Query: 415 HTMF-SRLSSFHTSF-----------------------------------------SSPQ 474
M SR F T F S
Sbjct: 717 TNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESEN 776
Query: 475 PFFTDTSIDL----FP-----------LSESPLGNE-LAQSAPTSTTLDQSSISYGSPEP 534
F + S + FP L +S N+ + D + S GS P
Sbjct: 777 KNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNP 836
Query: 535 TS---------------DTPP---------RRFTRIREPP-------------IHLQDYH 594
D P RR R++ P + L +
Sbjct: 837 NESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHT 896
Query: 595 FFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKI 654
F+ + + + Y++ + W++A+N EL+A + +TW P K + +W++ +
Sbjct: 897 IFNDVPNSFDEIQYRDDKSS--WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSV 956
Query: 655 KTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDV 714
K + R+KARLVA+G++Q+Y IDYEETFA VA ++S R +L++ + QMDV
Sbjct: 957 KYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDV 1016
Query: 715 KNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTS 774
K FLNGTL E++YM+ P G VC L +A+YGLKQA R WF F + + F +
Sbjct: 1017 KTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVN 1076
Query: 775 SPHD--IALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYF 834
S D I + + + +LLYVDD++I D +++ + YL + F M DL + +F
Sbjct: 1077 SSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHF 1136
Query: 835 LGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDP--------------NPVSV 894
+G+ + + D LS++ +L+ + N N STPL P
Sbjct: 1137 IGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRS 1196
Query: 895 LVGSFIYLTV-THPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQFSSQSS 897
L+G +Y+ + T PD+ V+I+S++ + + + + R+LRY+KGT+ L F +
Sbjct: 1197 LIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLA 1256
BLAST of Cmc06g0168461 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 7.7e-44
Identity = 95/223 (42.60%), Postives = 138/223 (61.88%), Query Frame = 0
Query: 678 LLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGLEVSRRSDGYLLSKAKCT 737
LLLYVDD+++TG+ ++ L L F MKDLG ++YFLG+++ G LS+ K
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 738 SDLLAHSGIINSNTASTPL--------------DPNPVSVLVGSFIYLTVTHPDIAYVVH 797
+L ++G+++ STPL DP+ +VG+ YLT+T PDI+Y V+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 798 IVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDRRST 857
IV + + P F ++ R+LRY+KGT+ HGL S L + + ++DW G + RRST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182
Query: 858 TGYCFYLGNSLISWHSKKQSVVSRSSTESEYRALADTTAELLW 887
TG+C +LG ++ISW +K+Q VSRSSTE+EYRALA T AEL W
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc06g0168461 vs. ExPASy TrEMBL
Match:
A0A5A7TMW1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001470 PE=4 SV=1)
HSP 1 Score: 1752.6 bits (4538), Expect = 0.0e+00
Identity = 861/899 (95.77%), Postives = 866/899 (96.33%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCV NLTFNLVSVD
Sbjct: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVSNLTFNLVSVD 60
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY
Sbjct: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
QLHLRLGH SPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL
Sbjct: 121 QLHLRLGHVSPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL
Sbjct: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
Query: 241 IKTLCTDYALEYKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVRALILSASCPEKFWGE 300
IKTLCTDYALEYKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVRALILSASCPEKFWGE
Sbjct: 241 IKTLCTDYALEYKDYTLLSFLSCPHTSQQNRRAECKHRHILDSVRALILSASCPEKFWGE 300
Query: 301 AALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHEHTKLEPHAR 360
AALTFVYTINRLPSSVLQNI PFEKLYGTLPNYSNLK FGCAFFILLHPHEHTKLEPHAR
Sbjct: 301 AALTFVYTINRLPSSVLQNISPFEKLYGTLPNYSNLKTFGCAFFILLHPHEHTKLEPHAR 360
Query: 361 LYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSI 420
LYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSI
Sbjct: 361 LYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSI 420
Query: 421 DLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREPPIHLQDYHF 480
DLFPLSESPLGNELAQSAPTSTTLDQSSIS GSPEPTSDTPPRR TRIREPPIHLQDYHF
Sbjct: 421 DLFPLSESPLGNELAQSAPTSTTLDQSSISDGSPEPTSDTPPRRSTRIREPPIHLQDYHF 480
Query: 481 FSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIK 540
FSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIK
Sbjct: 481 FSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIK 540
Query: 541 THSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDVK 600
THSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDVK
Sbjct: 541 THSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQWPLLQMDVK 600
Query: 601 NDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS 660
NDFLNGTLSEKVYMKPP GTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS
Sbjct: 601 NDFLNGTLSEKVYMKPPPGTYSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS 660
Query: 661 PHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGL 720
PHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGL
Sbjct: 661 PHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGL 720
Query: 721 EVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPNPVSVLVGSFIYLTVTHPDIAY 780
EV RRSDGYLLSKAKC DLLAHSGI NSNTASTPLDPN ++LT
Sbjct: 721 EVFRRSDGYLLSKAKCAFDLLAHSGITNSNTASTPLDPN---------VHLTPYDGVPLE 780
Query: 781 VVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDR 840
V + KFITTPRTIHFTVVLRIL YIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDR
Sbjct: 781 DVSLYRKFITTPRTIHFTVVLRILHYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDR 840
Query: 841 RSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQL 900
RSTTGYCFYLGNSLISW+SKKQS+VSRSSTESEYRALADTTAELLWLRWLLADMGVPQL
Sbjct: 841 RSTTGYCFYLGNSLISWYSKKQSIVSRSSTESEYRALADTTAELLWLRWLLADMGVPQL 890
BLAST of Cmc06g0168461 vs. ExPASy TrEMBL
Match:
A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)
HSP 1 Score: 1595.1 bits (4129), Expect = 0.0e+00
Identity = 801/922 (86.88%), Postives = 829/922 (89.91%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTS+YSLMNTPSP KSLPPIY+ADGNCMNITH+GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 330 MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+LG TVSFS NGCQVQDP+TGQTIG GRKVGRLFELLSLQVPSP SIS PVTDSDTY
Sbjct: 390 QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFSTS SI DKPFDL
Sbjct: 450 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFS
Sbjct: 510 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD ALEYKD TLLSFL SCPHTSQQN RAE KHRHILDSVRAL+LSA
Sbjct: 570 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPSSVLQNI PFE+LYGT PNYSNLK+FGCA F+LL PHE
Sbjct: 630 SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFH SFSSP
Sbjct: 690 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPLSES GNELAQSAPTS T DQSSIS G+P+P D PPRR TR+REP
Sbjct: 750 QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
PIHLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEK HTWDYVDLPPGK+PI
Sbjct: 810 PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQEYGIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 870 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYL QHFEMKDL
Sbjct: 990 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229
BLAST of Cmc06g0168461 vs. ExPASy TrEMBL
Match:
A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)
HSP 1 Score: 1595.1 bits (4129), Expect = 0.0e+00
Identity = 801/922 (86.88%), Postives = 829/922 (89.91%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTS+YSLMNTPSP KSLPPIY+ADGNCMNITH+GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 330 MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+LG TVSFS NGCQVQDP+TGQTIG GRKVGRLFELLSLQVPSP SIS PVTDSDTY
Sbjct: 390 QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFSTS SI DKPFDL
Sbjct: 450 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFS
Sbjct: 510 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD ALEYKD TLLSFL SCPHTSQQN RAE KHRHILDSVRAL+LSA
Sbjct: 570 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPSSVLQNI PFE+LYGT PNYSNLK+FGCA F+LL PHE
Sbjct: 630 SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFH SFSSP
Sbjct: 690 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPLSES GNELAQSAPTS T DQSSIS G+P+P D PPRR TR+REP
Sbjct: 750 QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
PIHLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEK HTWDYVDLPPGK+PI
Sbjct: 810 PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQEYGIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 870 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYL QHFEMKDL
Sbjct: 990 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229
BLAST of Cmc06g0168461 vs. ExPASy TrEMBL
Match:
A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)
HSP 1 Score: 1593.9 bits (4126), Expect = 0.0e+00
Identity = 800/922 (86.77%), Postives = 829/922 (89.91%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTS+YSLMNTPSP KSLPPIY+ADGNCMNITH+GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 330 MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+LG TVSFS NGCQVQDP+TGQTIG GRKVGRLFE+LSLQVPSP SIS PVTDSDTY
Sbjct: 390 QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSLQVPSP-SISAPVTDSDTY 449
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFSTS SI DKPFDL
Sbjct: 450 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFS
Sbjct: 510 IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD ALEYKD TLLSFL SCPHTSQQN RAE KHRHILDSVRAL+LSA
Sbjct: 570 IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPSSVLQNI PFE+LYGT PNYSNLK+FGCA F+LL PHE
Sbjct: 630 SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFH SFSSP
Sbjct: 690 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPLSES GNELAQSAPTS T DQSSIS G+P+P D PPRR TR+REP
Sbjct: 750 QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
PIHLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEK HTWDYVDLPPGK+PI
Sbjct: 810 PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQEYGIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 870 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYL QHFEMKDL
Sbjct: 990 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229
BLAST of Cmc06g0168461 vs. ExPASy TrEMBL
Match:
A0A5D3DD70 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00150 PE=4 SV=1)
HSP 1 Score: 1582.8 bits (4097), Expect = 0.0e+00
Identity = 795/922 (86.23%), Postives = 824/922 (89.37%), Query Frame = 0
Query: 1 MTSNYSLMNTPSPAKSLPPIYSADGNCMNITHIGTVNTPSLNLPHTYCVPNLTFNLVSVD 60
MTSNYSLMNTPSP KSLPPIY+ADGNCMNITH GT+NTPSLNLPHTYCVPNLTFNLVSV
Sbjct: 170 MTSNYSLMNTPSPTKSLPPIYAADGNCMNITHTGTINTPSLNLPHTYCVPNLTFNLVSVG 229
Query: 61 QLCNLGLTVSFSPNGCQVQDPKTGQTIGMGRKVGRLFELLSLQVPSPSSISTPVTDSDTY 120
QLC+L LTVSFS NGCQVQDP+TGQTIG GRKVGRLFELLSLQVPSP SIS PVTDSDTY
Sbjct: 230 QLCDLRLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 289
Query: 121 QLHLRLGHASPEKLCHLISINHLNSTNKFVPFNCLNCKLAKQPAWSFSTSISISDKPFDL 180
Q HLRLGHASPEKL HLISIN+LNS KFVPFNCLNCKLAKQPA SFS S SI DKPFDL
Sbjct: 290 QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDL 349
Query: 181 IHSNIWGPIPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSYL 240
IHS+IWGP PT+TVHGYRYYVLFIDDFSRFTWIYFLKHRSELS TYIEFANMIRTQFS
Sbjct: 350 IHSDIWGPAPTTTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSHTYIEFANMIRTQFSCP 409
Query: 241 IKTLCTDYALEYKDYTLLSFL---------SCPHTSQQNRRAECKHRHILDSVRALILSA 300
IKTL TD + EYKD TLLSFL SCPHTSQQN RAE KH HILDSVRAL+LSA
Sbjct: 410 IKTLRTDNSFEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHHHILDSVRALLLSA 469
Query: 301 SCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNLKIFGCAFFILLHPHE 360
SCPEKFWGEAALT VYTINRLPS VLQNI PFEKLYGT PNYSNLK+FGCA F+LLHPHE
Sbjct: 470 SCPEKFWGEAALTSVYTINRLPSFVLQNISPFEKLYGTPPNYSNLKVFGCACFVLLHPHE 529
Query: 361 HTKLEPHARLYCFLGYGTEHKGFRCWDPLFNRLRISRYVTFWEHTMFSRLSSFHTSFSSP 420
HTKLEP ARL CFLGYGTEHKGFRCWDPL NRLRISR+VTFWEHTMFSRLSSFHTSFSSP
Sbjct: 530 HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSP 589
Query: 421 QPFFTDTSIDLFPLSESPLGNELAQSAPTSTTLDQSSISYGSPEPTSDTPPRRFTRIREP 480
Q FFTDTSIDLFPL ES NELAQSAPTS T DQSSIS G+P+P+ D PPRR TR+R P
Sbjct: 590 QSFFTDTSIDLFPLPESTPDNELAQSAPTSATSDQSSISDGNPDPSPDIPPRRSTRVRAP 649
Query: 481 PIHLQDYHFFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPI 540
P HLQDYH FSTIVSL+EPTSYQEASTDPLWQKAMNDEL ALEKTHTWDYVDLPPGK+PI
Sbjct: 650 PSHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI 709
Query: 541 GCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVAATKQ 600
GCKWIYKIKTHSD TIER+KARLVAKGYSQE+GIDYEETFA VA MTSVRSLLAVAA KQ
Sbjct: 710 GCKWIYKIKTHSDGTIERYKARLVAKGYSQEFGIDYEETFAPVARMTSVRSLLAVAAAKQ 769
Query: 601 WPLLQMDVKNDFLNGTLSEKVYMKPPLGTYSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
WPLLQMDVKN FLNGTLSE+VYMKPP GT SPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 770 WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 829
Query: 661 ITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDL 720
ITQLGFTSSPHD ALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYL QHFEMKDL
Sbjct: 830 ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 889
Query: 721 GSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDPN------------ 780
GSLNYFLGLEVSRRSDGYLLS+AK SDLLA SGI +SNTASTPLDPN
Sbjct: 890 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 949
Query: 781 PVSV---LVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQ 840
VS+ LVGS IYLTVT PDIAY VHIVS+F+ PRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 950 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1009
Query: 841 FSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQSVVSRSSTESEYRA 899
FSSQSSLVLSGYS+ DW GDPTDRRSTTGYCFYLG+SLISW SKKQSVVSRSSTESEYRA
Sbjct: 1010 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1069
BLAST of Cmc06g0168461 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 379.8 bits (974), Expect = 6.1e-105
Identity = 211/514 (41.05%), Postives = 303/514 (58.95%), Query Frame = 0
Query: 435 AQSAPTSTTLD---QSSISYGSPEPTSDTPPRRFTRIREPPIHLQDYH------------ 494
A ++ +S+++D ++I PEP+ T RR + P +LQDY+
Sbjct: 5 ADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRK----PAYLQDYYCHSVASLTIHDI 64
Query: 495 ---------------FFSTIVSLVEPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDL 554
F I EP++Y EA +W AM+DE+ A+E THTW+ L
Sbjct: 65 SQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTL 124
Query: 555 PPGKKPIGCKWIYKIKTHSDATIERHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLL 614
PP KKPIGCKW+YKIK +SD TIER+KARLVAKGY+Q+ GID+ ETF+ V +TSV+ +L
Sbjct: 125 PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLIL 184
Query: 615 AVAATKQWPLLQMDVKNDFLNGTLSEKVYMKPPLGTYS------PPHKVCLLRRALYGLK 674
A++A + L Q+D+ N FLNG L E++YMK P G + PP+ VC L++++YGLK
Sbjct: 185 AISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLK 244
Query: 675 QAPRAWFATFSSTITQLGFTSSPHDIALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDL 734
QA R WF FS T+ GF S D F + T + +L+YVDD+II N+ A+ +L
Sbjct: 245 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 304
Query: 735 QHYLDQHFEMKDLGSLNYFLGLEVSRRSDGYLLSKAKCTSDLLAHSGIINSNTASTPLDP 794
+ L F+++DLG L YFLGLE++R + G + + K DLL +G++ +S P+DP
Sbjct: 305 KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 364
Query: 795 N---------------PVSVLVGSFIYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRI 854
+ L+G +YL +T DI++ V+ +S+F PR H V++I
Sbjct: 365 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 424
Query: 855 LRYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDRRSTTGYCFYLGNSLISWHSKKQS 898
L YIKGT+G GL +SSQ+ + L +S+ + RRST GYC +LG SLISW SKKQ
Sbjct: 425 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 484
BLAST of Cmc06g0168461 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 180.6 bits (457), Expect = 5.4e-45
Identity = 95/223 (42.60%), Postives = 138/223 (61.88%), Query Frame = 0
Query: 678 LLLYVDDMIITGNDPQAISDLQHYLDQHFEMKDLGSLNYFLGLEVSRRSDGYLLSKAKCT 737
LLLYVDD+++TG+ ++ L L F MKDLG ++YFLG+++ G LS+ K
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 738 SDLLAHSGIINSNTASTPL--------------DPNPVSVLVGSFIYLTVTHPDIAYVVH 797
+L ++G+++ STPL DP+ +VG+ YLT+T PDI+Y V+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 798 IVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSNTDWVGDPTDRRST 857
IV + + P F ++ R+LRY+KGT+ HGL S L + + ++DW G + RRST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182
Query: 858 TGYCFYLGNSLISWHSKKQSVVSRSSTESEYRALADTTAELLW 887
TG+C +LG ++ISW +K+Q VSRSSTE+EYRALA T AEL W
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc06g0168461 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 97.4 bits (241), Expect = 6.1e-20
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 0
Query: 489 EPTSYQEASTDPLWQKAMNDELHALEKTHTWDYVDLPPGKKPIGCKWIYKIKTHSDATIE 548
EP S A DP W +AM +EL AL + TW V P + +GCKW++K K HSD T++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 549 RHKARLVAKGYSQEYGIDYEETFAHVAHMTSVRSLLAVA 588
R KARLVAKG+ QE GI + ET++ V ++R++L VA
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of Cmc06g0168461 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 75.9 bits (185), Expect = 1.9e-13
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 769 IYLTVTHPDIAYVVHIVSKFITTPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGY 828
+YLT+T PD+ + V+ +S+F + RT V ++L Y+KGT+G GL +S+ S L L +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 829 SNTDWVGDPTDRRSTTGYC 848
+++DW P RRS TG+C
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79
BLAST of Cmc06g0168461 vs. TAIR 10
Match:
ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 55.1 bits (131), Expect = 3.4e-07
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0
Query: 277 HRHILDSVRALILSASCPEKFWGEAALTFVYTINRLPSSVLQNIYPFEKLYGTLPNYSNL 336
+R I++ VR+++ P+ F +AA T V+ IN+ PS+ + P E + ++P YS L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 337 KIFGCAFFILLHPHEHTKLEPHAR 361
+ FGC +I + KL+P A+
Sbjct: 62 RRFGCVAYIHC---DEGKLKPRAK 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0042921.1 | 0.0e+00 | 95.77 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0041601.1 | 0.0e+00 | 86.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK04714.1 | 0.0e+00 | 86.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0037745.1 | 0.0e+00 | 86.77 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK21532.1 | 0.0e+00 | 86.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 2.5e-156 | 35.05 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.5e-153 | 34.16 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 4.0e-117 | 34.18 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 4.3e-95 | 27.64 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P92519 | 7.7e-44 | 42.60 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TMW1 | 0.0e+00 | 95.77 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7VIT8 | 0.0e+00 | 86.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3C0D7 | 0.0e+00 | 86.88 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7T8F2 | 0.0e+00 | 86.77 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3DD70 | 0.0e+00 | 86.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 6.1e-105 | 41.05 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 5.4e-45 | 42.60 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00820.1 | 6.1e-20 | 47.47 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00240.1 | 1.9e-13 | 41.77 | Gag-Pol-related retrotransposon family protein | [more] |
ATMG00710.1 | 3.4e-07 | 33.33 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |