Cmc06g0168071 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0168071
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 21661244 .. 21661666 (+)
RNA-Seq Expression	Cmc06g0168071
Synteny	Cmc06g0168071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCATGAACTGCCAAAGACACTGCCTCTTCGACAGGAGATTCTCGATCACGAGATCGAACTTGTCCTAGGAGCCAGAACCAAGCCTCCAACAAAGAATGCTTACCGGATGGCTCCACTTGAGTTAGCTGAGCTCAGGAAACAATTGAACGAGTTCTTAGTTGCCAAATTTATCAAACCTGCAAAAGCGCCTTATGGGACTCCTGTGCTATTTCAAAAGAAGAAAGATGAGTCATTACGACTGTGCATAGACTACAGAGCTTTAAACAAAGTCACAGTTCGAAATAGATATCCCTTCCCGATCATAAATGATTTATTTGACCAATTGGATGGAGCTCAGTACTTCACGAAGCTTGATCTCCAGTCAGGCTACTACCAAGTTCGGATAGCACAAGGGGATGGACCGAAGACTACATGTTAA

mRNA sequence

ATGCCGCATGAACTGCCAAAGACACTGCCTCTTCGACAGGAGATTCTCGATCACGAGATCGAACTTGTCCTAGGAGCCAGAACCAAGCCTCCAACAAAGAATGCTTACCGGATGGCTCCACTTGAGTTAGCTGAGCTCAGGAAACAATTGAACGAGTTCTTAGTTGCCAAATTTATCAAACCTGCAAAAGCGCCTTATGGGACTCCTGTGCTATTTCAAAAGAAGAAAGATGAGTCATTACGACTGTGCATAGACTACAGAGCTTTAAACAAAGTCACAGTTCGAAATAGATATCCCTTCCCGATCATAAATGATTTATTTGACCAATTGGATGGAGCTCAGTACTTCACGAAGCTTGATCTCCAGTCAGGCTACTACCAAGTTCGGATAGCACAAGGGGATGGACCGAAGACTACATGTTAA

Coding sequence (CDS)

ATGCCGCATGAACTGCCAAAGACACTGCCTCTTCGACAGGAGATTCTCGATCACGAGATCGAACTTGTCCTAGGAGCCAGAACCAAGCCTCCAACAAAGAATGCTTACCGGATGGCTCCACTTGAGTTAGCTGAGCTCAGGAAACAATTGAACGAGTTCTTAGTTGCCAAATTTATCAAACCTGCAAAAGCGCCTTATGGGACTCCTGTGCTATTTCAAAAGAAGAAAGATGAGTCATTACGACTGTGCATAGACTACAGAGCTTTAAACAAAGTCACAGTTCGAAATAGATATCCCTTCCCGATCATAAATGATTTATTTGACCAATTGGATGGAGCTCAGTACTTCACGAAGCTTGATCTCCAGTCAGGCTACTACCAAGTTCGGATAGCACAAGGGGATGGACCGAAGACTACATGTTAA

Protein sequence

MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKTTC

Homology

[Close]

BLAST of Cmc06g0168071 vs. NCBI nr
Match: TYK05260.1 (uncharacterized protein E5676_scaffold108G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MPHELPKTLPLRQEILDHEIELVL ARTKPPTKNAYRMAPLELAELRKQLNEFLVA+FIK
Sbjct: 227 MPHELPKTLPLRQEILDHEIELVLRARTKPPTKNAYRMAPLELAELRKQLNEFLVAEFIK 286

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKA YGTPVLFQKKKDESLRLCIDYRALNKVTV+NRYPFPIINDLFDQLDGAQYFTKLD
Sbjct: 287 PAKASYGTPVLFQKKKDESLRLCIDYRALNKVTVQNRYPFPIINDLFDQLDGAQYFTKLD 346

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           LQSGYYQVRIAQGDGPKTTC
Sbjct: 347 LQSGYYQVRIAQGDGPKTTC 366

[Close]

BLAST of Cmc06g0168071 vs. NCBI nr
Match: KAA0056238.1 (uncharacterized protein E6C27_scaffold226G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MPHELPKTLPLRQEILDHEIELVL ARTKPPTKNAYRMAPLELAELRKQLNEFLVA+FIK
Sbjct: 214 MPHELPKTLPLRQEILDHEIELVLRARTKPPTKNAYRMAPLELAELRKQLNEFLVAEFIK 273

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKA YGTPVLFQKKKDESLRLCIDYRALNKVTV+NRYPFPIINDLFDQLDGAQYFTKLD
Sbjct: 274 PAKASYGTPVLFQKKKDESLRLCIDYRALNKVTVQNRYPFPIINDLFDQLDGAQYFTKLD 333

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           LQSGYYQVRIAQGDGPKTTC
Sbjct: 334 LQSGYYQVRIAQGDGPKTTC 353

[Close]

BLAST of Cmc06g0168071 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 220.7 bits (561), Expect = 7.9e-54
Identity = 111/140 (79.29%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MP  LPKTLP R+ I DHEIEL+ GA  KPP KNAYRMAP ELAELRKQL+E L A FI+
Sbjct: 629 MPDSLPKTLPPRRGI-DHEIELIPGA--KPPAKNAYRMAPPELAELRKQLDELLNAGFIR 688

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKAP+G PVLFQKKKD +LRLCIDYRALNKVTVRN+YP PII DLFDQL GA+YFTKLD
Sbjct: 689 PAKAPFGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIITDLFDQLHGAKYFTKLD 748

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           L+SGYYQVRIA+GD PKTTC
Sbjct: 749 LRSGYYQVRIAEGDEPKTTC 765

[Close]

BLAST of Cmc06g0168071 vs. NCBI nr
Match: XP_022975516.1 (uncharacterized protein LOC111474945, partial [Cucurbita maxima])

HSP 1 Score: 220.3 bits (560), Expect = 1.0e-53
Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MP  LP+TLP R+ I DHEIEL+ G   KPP KNAYRMAP ELAELRKQL+E L A FI+
Sbjct: 553 MPESLPQTLPPRRGI-DHEIELIPG--VKPPAKNAYRMAPPELAELRKQLDELLKAGFIR 612

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKAPYG PVLFQKKKD +LRLCIDYRALNKVTVRN+YP PII+DLFDQL GA+YFTKLD
Sbjct: 613 PAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLD 672

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           L+SGYYQVRIA+GD PKTTC
Sbjct: 673 LRSGYYQVRIAEGDEPKTTC 689

[Close]

BLAST of Cmc06g0168071 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MP  LP+TLP R+ I DHEIEL+ G   KPP KNAYRMAP ELAELRKQL+E L A FI+
Sbjct: 635 MPESLPQTLPPRRGI-DHEIELLPG--VKPPAKNAYRMAPPELAELRKQLDELLKAGFIR 694

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKAPYG PVLFQKKKD +LRLCIDYRALNKVTVRN+YP PII+DLFDQL GA+YFTKLD
Sbjct: 695 PAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLD 754

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           L+SGYYQVRIA+GD PKTTC
Sbjct: 755 LRSGYYQVRIAEGDEPKTTC 771

[Close]

BLAST of Cmc06g0168071 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21
Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 79  SLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQVRIAQGDGPKT 138
           SLR+CIDYRAL KVT++N+YP P ++DLFD+L  A +FTKLDL+SGY+QVRIA+GD PKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 139 TC 141
           TC
Sbjct: 65  TC 66

[Close]

BLAST of Cmc06g0168071 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-20
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 6   PKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAP 65
           P+   +    + H+IE+  GAR   P    Y +      E+ K + + L  KFI P+K+P
Sbjct: 574 PRPADINNIPVKHDIEIKPGARL--PRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 633

Query: 66  YGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGY 125
             +PV+   KKD + RLC+DYR LNK T+ + +P P I++L  ++  AQ FT LDL SGY
Sbjct: 634 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 693

Query: 126 YQVRIAQGDGPKT 139
           +Q+ +   D  KT
Sbjct: 694 HQIPMEPKDRYKT 704

[Close]

BLAST of Cmc06g0168071 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-20
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 6   PKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAP 65
           P+   +    + H+IE+  GAR   P    Y +      E+ K + + L  KFI P+K+P
Sbjct: 600 PRPADINNIPVKHDIEIKPGARL--PRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 659

Query: 66  YGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGY 125
             +PV+   KKD + RLC+DYR LNK T+ + +P P I++L  ++  AQ FT LDL SGY
Sbjct: 660 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 719

Query: 126 YQVRIAQGDGPKT 139
           +Q+ +   D  KT
Sbjct: 720 HQIPMEPKDRYKT 730

[Close]

BLAST of Cmc06g0168071 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-16
Identity = 46/129 (35.66%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 9   LPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAPYGT 68
           LP   + L+ E+EL      + P +N Y + P ++  +  ++N+ L +  I+ +KA    
Sbjct: 393 LPKPIKGLEFEVELT-QENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINAC 452

Query: 69  PVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQV 128
           PV+F  KK+ +LR+ +DY+ LNK    N YP P+I  L  ++ G+  FTKLDL+S Y+ +
Sbjct: 453 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 512

Query: 129 RIAQGDGPK 138
           R+ +GD  K
Sbjct: 513 RVRKGDEHK 519

[Close]

BLAST of Cmc06g0168071 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-16
Identity = 46/129 (35.66%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 9   LPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIKPAKAPYGT 68
           LP   + L+ E+EL      + P +N Y + P ++  +  ++N+ L +  I+ +KA    
Sbjct: 393 LPKPIKGLEFEVELT-QENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINAC 452

Query: 69  PVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLDLQSGYYQV 128
           PV+F  KK+ +LR+ +DY+ LNK    N YP P+I  L  ++ G+  FTKLDL+S Y+ +
Sbjct: 453 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 512

Query: 129 RIAQGDGPK 138
           R+ +GD  K
Sbjct: 513 RVRKGDEHK 519

[Close]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL
Match: A0A5A7UMB8 (Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00020 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.3e-72
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MPHELPKTLPLRQEILDHEIELVL ARTKPPTKNAYRMAPLELAELRKQLNEFLVA+FIK
Sbjct: 214 MPHELPKTLPLRQEILDHEIELVLRARTKPPTKNAYRMAPLELAELRKQLNEFLVAEFIK 273

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKA YGTPVLFQKKKDESLRLCIDYRALNKVTV+NRYPFPIINDLFDQLDGAQYFTKLD
Sbjct: 274 PAKASYGTPVLFQKKKDESLRLCIDYRALNKVTVQNRYPFPIINDLFDQLDGAQYFTKLD 333

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           LQSGYYQVRIAQGDGPKTTC
Sbjct: 334 LQSGYYQVRIAQGDGPKTTC 353

[Close]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL
Match: A0A5D3C1M6 (Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00740 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.3e-72
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MPHELPKTLPLRQEILDHEIELVL ARTKPPTKNAYRMAPLELAELRKQLNEFLVA+FIK
Sbjct: 227 MPHELPKTLPLRQEILDHEIELVLRARTKPPTKNAYRMAPLELAELRKQLNEFLVAEFIK 286

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKA YGTPVLFQKKKDESLRLCIDYRALNKVTV+NRYPFPIINDLFDQLDGAQYFTKLD
Sbjct: 287 PAKASYGTPVLFQKKKDESLRLCIDYRALNKVTVQNRYPFPIINDLFDQLDGAQYFTKLD 346

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           LQSGYYQVRIAQGDGPKTTC
Sbjct: 347 LQSGYYQVRIAQGDGPKTTC 366

[Close]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-54
Identity = 111/140 (79.29%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MP  LPKTLP R+ I DHEIEL+ GA  KPP KNAYRMAP ELAELRKQL+E L A FI+
Sbjct: 629 MPDSLPKTLPPRRGI-DHEIELIPGA--KPPAKNAYRMAPPELAELRKQLDELLNAGFIR 688

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKAP+G PVLFQKKKD +LRLCIDYRALNKVTVRN+YP PII DLFDQL GA+YFTKLD
Sbjct: 689 PAKAPFGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIITDLFDQLHGAKYFTKLD 748

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           L+SGYYQVRIA+GD PKTTC
Sbjct: 749 LRSGYYQVRIAEGDEPKTTC 765

[Close]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL
Match: A0A6J1IEF9 (uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.0e-54
Identity = 110/140 (78.57%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MP  LP+TLP R+ I DHEIEL+ G   KPP KNAYRMAP ELAELRKQL+E L A FI+
Sbjct: 553 MPESLPQTLPPRRGI-DHEIELIPG--VKPPAKNAYRMAPPELAELRKQLDELLKAGFIR 612

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKAPYG PVLFQKKKD +LRLCIDYRALNKVTVRN+YP PII+DLFDQL GA+YFTKLD
Sbjct: 613 PAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLD 672

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           L+SGYYQVRIA+GD PKTTC
Sbjct: 673 LRSGYYQVRIAEGDEPKTTC 689

[Close]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL
Match: A0A5A7UAP0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001580 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.5e-54
Identity = 109/140 (77.86%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MPHELPKTLPLRQEILDHEIELVLGARTKPPTKNAYRMAPLELAELRKQLNEFLVAKFIK 60
           MP  LPK+LP R+ ++DHEIELV GA  KPPTKNAYRMAP ELAELRKQL+E L A FIK
Sbjct: 160 MPDSLPKSLPPRR-MIDHEIELVPGA--KPPTKNAYRMAPPELAELRKQLDELLNAGFIK 219

Query: 61  PAKAPYGTPVLFQKKKDESLRLCIDYRALNKVTVRNRYPFPIINDLFDQLDGAQYFTKLD 120
           PAKAPYG PVLFQ+KKD SLRLCIDYRALNK+T+RN+YP PII DLFD L GA+YF+KLD
Sbjct: 220 PAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTIRNKYPLPIITDLFDHLHGAKYFSKLD 279

Query: 121 LQSGYYQVRIAQGDGPKTTC 141
           L+SGYYQVRIA+GD PKTTC
Sbjct: 280 LRSGYYQVRIAEGDEPKTTC 296

The following BLAST results are available for this feature:

BLAST of Cmc06g0168071 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05260.1	1.1e-71	97.14	uncharacterized protein E5676_scaffold108G00740 [Cucumis melo var. makuwa]	[more]
KAA0056238.1	1.1e-71	97.14	uncharacterized protein E6C27_scaffold226G00020 [Cucumis melo var. makuwa]	[more]
XP_022150099.1	7.9e-54	79.29	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
XP_022975516.1	1.0e-53	78.57	uncharacterized protein LOC111474945, partial [Cucurbita maxima]	[more]
XP_023537907.1	1.8e-53	78.57	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc06g0168071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	5.4e-21	70.97	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	2.0e-20	38.35	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.0e-20	38.35	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	2.3e-16	35.66	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.3e-16	35.66	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMB8	5.3e-72	97.14	Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3C1M6	5.3e-72	97.14	Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1D906	3.8e-54	79.29	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A6J1IEF9	5.0e-54	78.57	uncharacterized protein LOC111474945 OS=Cucurbita maxima OX=3661 GN=LOC111474945...	[more]
A0A5A7UAP0	8.5e-54	77.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cmc06g0168071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 98..125 e-value: 1.1E-40 score: 141.2
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 17..139 e-value: 1.1E-40 score: 141.2
None	No IPR available	PANTHER	PTHR15503:SF11	RETROTRANSPOSON GAG-LIKE PROTEIN 6	coord: 30..139
None	No IPR available	CDD	cd01647	RT_LTR	coord: 57..139 e-value: 3.23884E-35 score: 118.082
IPR032567	LDOC1-related	PANTHER	PTHR15503	LDOC1 RELATED	coord: 30..139
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 14..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0168071.1	Cmc06g0168071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity