Cmc06g0167791 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0167791
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 21126055 .. 21127708 (-)
RNA-Seq Expression	Cmc06g0167791
Synteny	Cmc06g0167791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTGGTTTGACGAATGCTCTGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATTGATGATGTCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGTATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCTAGCTAAGATAGAGGCAGTCATCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGAATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGACAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGTAAGGTAAGGTAGTTGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAATTGGAAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGGCAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGACCTTGAGCGGGCTGAGATTGCAGTGTCAGTGAGGGCAGTCACTATGCAGTTAGCCCAATTGACGGTACAACCGACGTTGAGGCAAAAGATCATTAATGCTCAGCGTAACGATCCATATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCTATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTAACAGTTCCCCATTTTCCATGCACCCAGGGAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGATTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGCGAACAGACTTACCAAATCAGCGCACTTCGTCCTGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAATGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTTGAAGGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAAGAGAGGAAAGTTGA

mRNA sequence

ATGTCTTTTGGTTTGACGAATGCTCTGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATTGATGATGTCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGTATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCTAGCTAAGATAGAGGCAGTCATCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGAATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTAAGGTAGTTGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAATTGGAAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGGCAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGACCTTGAGCGGGCTGAGATTGCAGTGTCAGTGAGGGCAGTCACTATGCAGTTAGCCCAATTGACGGTACAACCGACGTTGAGGCAAAAGATCATTAATGCTCAGCGTAACGATCCATATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCTATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTAACAGTTCCCCATTTTCCATGCACCCAGGGAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGATTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGCGAACAGACTTACCAAATCAGCGCACTTCGTCCTGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAATGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTTGAAGGAAAGTTGA

Coding sequence (CDS)

ATGTCTTTTGGTTTGACGAATGCTCTGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATTGATGATGTCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGTATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCTAGCTAAGATAGAGGCAGTCATCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGAATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTAAGGTAGTTGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAATTGGAAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGGCAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGACCTTGAGCGGGCTGAGATTGCAGTGTCAGTGAGGGCAGTCACTATGCAGTTAGCCCAATTGACGGTACAACCGACGTTGAGGCAAAAGATCATTAATGCTCAGCGTAACGATCCATATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCTATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTAACAGTTCCCCATTTTCCATGCACCCAGGGAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGATTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGCGAACAGACTTACCAAATCAGCGCACTTCGTCCTGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAATGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTTGAAGGAAAGTTGA

Protein sequence

MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLKES

Homology

[Close]

BLAST of Cmc06g0167791 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.4 bits (2489), Expect = 7.9e-277
Identity = 489/535 (91.40%), Postives = 501/535 (93.64%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD          
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 181  -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                         GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 301  QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQAV
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 361  EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            EFS+SSDGGLLFERRLCVPSDS VKTELLSEA+SSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1054 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1113

Query: 421  REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1114 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1173

Query: 481  VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
            V +RLTKSAHFV GKSTYTASKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 1174 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1228

[Close]

BLAST of Cmc06g0167791 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.4 bits (2489), Expect = 7.9e-277
Identity = 490/535 (91.59%), Postives = 499/535 (93.27%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD          
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 181  -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                         GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 301  QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 361  EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            EFS+SSDGGLLFERRLCVPSDSAVKTELLSEA+SSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1308 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1367

Query: 421  REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1368 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1427

Query: 481  VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
            V +RLTKSAHFV GKSTYTASKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 1428 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1482

[Close]

BLAST of Cmc06g0167791 vs. NCBI nr
Match: KAA0042119.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.4 bits (2489), Expect = 7.9e-277
Identity = 489/535 (91.40%), Postives = 501/535 (93.64%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
           MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 73  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 132

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV SWTRPSTVSEVRSFLGLAGYYR
Sbjct: 133 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYR 192

Query: 121 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
           RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPD          
Sbjct: 193 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 252

Query: 181 -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                        GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 253 ASRKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 312

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK SHSAALITR
Sbjct: 313 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKASHSAALITR 372

Query: 301 QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
           QAPLHRDLERAEIAVSV+AVTMQLAQLTVQPTLRQ+II+AQRNDPYLVEKRGLAEAGQAV
Sbjct: 373 QAPLHRDLERAEIAVSVKAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLAEAGQAV 432

Query: 361 EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
           EFSISSDGGLLFERRLCVPSDSAVKTELL +A SSPFSMHPGSTKMYQDLKRVYWWRN+K
Sbjct: 433 EFSISSDGGLLFERRLCVPSDSAVKTELLFKAQSSPFSMHPGSTKMYQDLKRVYWWRNIK 492

Query: 421 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
           REVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 493 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 552

Query: 481 VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
           V +RLTKSAHFV GKSTYTASKWAQLYMSEIVRLHG+ VSIVSDRDARFTSKF K
Sbjct: 553 VVDRLTKSAHFVSGKSTYTASKWAQLYMSEIVRLHGVSVSIVSDRDARFTSKFWK 607

[Close]

BLAST of Cmc06g0167791 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 963.0 bits (2488), Expect = 1.0e-276
Identity = 489/535 (91.40%), Postives = 500/535 (93.46%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHE +LRMVLQTLRDNK
Sbjct: 770  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENHLRMVLQTLRDNK 829

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 830  LYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 889

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD          
Sbjct: 890  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 949

Query: 181  -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                         GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 950  TSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1009

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1010 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1069

Query: 301  QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQAV
Sbjct: 1070 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1129

Query: 361  EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            EFS+SSDGGLLFERRLCVPSDSAVKTELLSEA+SSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1130 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1189

Query: 421  REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1190 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1249

Query: 481  VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
            V +RLTKSAHFV GKSTYT+SKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 1250 VVDRLTKSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1304

[Close]

BLAST of Cmc06g0167791 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 961.8 bits (2485), Expect = 2.3e-276
Identity = 488/535 (91.21%), Postives = 499/535 (93.27%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
           MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 212 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 271

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 272 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 331

Query: 121 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
           RFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD          
Sbjct: 332 RFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 391

Query: 181 -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                        GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 392 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 451

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 452 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 511

Query: 301 QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
           QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQAV
Sbjct: 512 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 571

Query: 361 EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
           EFS+SSDGGLLFERRLCVPSDSAVKTELL+EA+SSPFSMHPGSTKMYQDLKR+YWWRNMK
Sbjct: 572 EFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMK 631

Query: 421 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
           REVAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GLPRTLRGFTVIWV
Sbjct: 632 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWV 691

Query: 481 VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
           V +RLTKSAHFV GKSTYT SKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 692 VVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 746

[Close]

BLAST of Cmc06g0167791 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-69
Identity = 165/547 (30.16%), Postives = 279/547 (51.01%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            M +G++ A A F   +N +  E  ++ V+ ++DD+LI+SK+E+EH ++++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V+ W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL-------------- 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL              
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --TVPDGKV------------VAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG- 240
               V  G V            V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++    ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQD 420
             L    + VE +I    GLL   +  + +P+D+ +   ++ + +     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

Query: 421  LKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLP 480
            + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP
Sbjct: 954  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 1013

Query: 481  RTLRGFTVIWVVANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARF 514
             +  G+  ++VV +R +K A  V    + TA + A+++   ++   G P  I++D D  F
Sbjct: 1014 ES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1062

[Close]

BLAST of Cmc06g0167791 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-69
Identity = 165/547 (30.16%), Postives = 279/547 (51.01%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            M +G++ A A F   +N +  E  ++ V+ ++DD+LI+SK+E+EH ++++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V+ W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL-------------- 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL              
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --TVPDGKV------------VAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG- 240
               V  G V            V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++    ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQD 420
             L    + VE +I    GLL   +  + +P+D+ +   ++ + +     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

Query: 421  LKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLP 480
            + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP
Sbjct: 954  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 1013

Query: 481  RTLRGFTVIWVVANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARF 514
             +  G+  ++VV +R +K A  V    + TA + A+++   ++   G P  I++D D  F
Sbjct: 1014 ES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1062

[Close]

BLAST of Cmc06g0167791 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-69
Identity = 165/547 (30.16%), Postives = 279/547 (51.01%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            M +G++ A A F   +N +  E  ++ V+ ++DD+LI+SK+E+EH ++++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V+ W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL-------------- 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL              
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --TVPDGKV------------VAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG- 240
               V  G V            V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++    ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQD 420
             L    + VE +I    GLL   +  + +P+D+ +   ++ + +     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

Query: 421  LKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLP 480
            + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP
Sbjct: 954  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 1013

Query: 481  RTLRGFTVIWVVANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARF 514
             +  G+  ++VV +R +K A  V    + TA + A+++   ++   G P  I++D D  F
Sbjct: 1014 ES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1062

[Close]

BLAST of Cmc06g0167791 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-69
Identity = 165/547 (30.16%), Postives = 279/547 (51.01%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            M +G++ A A F   +N +  E  ++ V+ ++DD+LI+SK+E+EH ++++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V+ W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL-------------- 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL              
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --TVPDGKV------------VAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG- 240
               V  G V            V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++    ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQD 420
             L    + VE +I    GLL   +  + +P+D+ +   ++ + +     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

Query: 421  LKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLP 480
            + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP
Sbjct: 954  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 1013

Query: 481  RTLRGFTVIWVVANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARF 514
             +  G+  ++VV +R +K A  V    + TA + A+++   ++   G P  I++D D  F
Sbjct: 1014 ES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1062

[Close]

BLAST of Cmc06g0167791 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.1e-69
Identity = 165/547 (30.16%), Postives = 279/547 (51.01%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            M +G++ A A F   +N +  E  ++ V+ ++DD+LI+SK+E+EH ++++ VLQ L++  
Sbjct: 534  MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            L    +KCEF   QV F+G+ +S+ G +     I+ V+ W +P    E+R FLG   Y R
Sbjct: 594  LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL-------------- 180
            +F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL              
Sbjct: 654  KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181  --TVPDGKV------------VAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG- 240
               V  G V            V Y S ++   + NY   D E+ A++ +LK WRHYL   
Sbjct: 714  ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241  -EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
             E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774  IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301  SHSAALITRQAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKR 360
                 ++    P+ +D E   I          + Q+++    + +++    ND  L+   
Sbjct: 834  -----IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL- 893

Query: 361  GLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQD 420
             L    + VE +I    GLL   +  + +P+D+ +   ++ + +     +HPG   +   
Sbjct: 894  -LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNI 953

Query: 421  LKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLP 480
            + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP
Sbjct: 954  ILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP 1013

Query: 481  RTLRGFTVIWVVANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARF 514
             +  G+  ++VV +R +K A  V    + TA + A+++   ++   G P  I++D D  F
Sbjct: 1014 ES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIF 1062

[Close]

BLAST of Cmc06g0167791 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 3.8e-277
Identity = 490/535 (91.59%), Postives = 499/535 (93.27%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD          
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 181  -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                         GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 301  QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 361  EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            EFS+SSDGGLLFERRLCVPSDSAVKTELLSEA+SSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1308 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1367

Query: 421  REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1368 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1427

Query: 481  VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
            V +RLTKSAHFV GKSTYTASKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 1428 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1482

[Close]

BLAST of Cmc06g0167791 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 3.8e-277
Identity = 489/535 (91.40%), Postives = 501/535 (93.64%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD          
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 181  -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                         GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 301  QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQAV
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 361  EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            EFS+SSDGGLLFERRLCVPSDS VKTELLSEA+SSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1054 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1113

Query: 421  REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1114 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1173

Query: 481  VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
            V +RLTKSAHFV GKSTYTASKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 1174 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1228

[Close]

BLAST of Cmc06g0167791 vs. ExPASy TrEMBL
Match: A0A5A7TLA3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005990 PE=4 SV=1)

HSP 1 Score: 963.4 bits (2489), Expect = 3.8e-277
Identity = 489/535 (91.40%), Postives = 501/535 (93.64%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
           MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 73  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 132

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV SWTRPSTVSEVRSFLGLAGYYR
Sbjct: 133 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYR 192

Query: 121 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
           RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPD          
Sbjct: 193 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 252

Query: 181 -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                        GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 253 ASRKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 312

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK SHSAALITR
Sbjct: 313 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKASHSAALITR 372

Query: 301 QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
           QAPLHRDLERAEIAVSV+AVTMQLAQLTVQPTLRQ+II+AQRNDPYLVEKRGLAEAGQAV
Sbjct: 373 QAPLHRDLERAEIAVSVKAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLAEAGQAV 432

Query: 361 EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
           EFSISSDGGLLFERRLCVPSDSAVKTELL +A SSPFSMHPGSTKMYQDLKRVYWWRN+K
Sbjct: 433 EFSISSDGGLLFERRLCVPSDSAVKTELLFKAQSSPFSMHPGSTKMYQDLKRVYWWRNIK 492

Query: 421 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
           REVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 493 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 552

Query: 481 VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
           V +RLTKSAHFV GKSTYTASKWAQLYMSEIVRLHG+ VSIVSDRDARFTSKF K
Sbjct: 553 VVDRLTKSAHFVSGKSTYTASKWAQLYMSEIVRLHGVSVSIVSDRDARFTSKFWK 607

[Close]

BLAST of Cmc06g0167791 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 5.0e-277
Identity = 489/535 (91.40%), Postives = 500/535 (93.46%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
            MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHE +LRMVLQTLRDNK
Sbjct: 770  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENHLRMVLQTLRDNK 829

Query: 61   LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
            LYAKFSKCEFWLKQVSFLGHVVSK GVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 830  LYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 889

Query: 121  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD          
Sbjct: 890  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 949

Query: 181  -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                         GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 950  TSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1009

Query: 241  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1010 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1069

Query: 301  QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
            QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQAV
Sbjct: 1070 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1129

Query: 361  EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
            EFS+SSDGGLLFERRLCVPSDSAVKTELLSEA+SSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1130 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1189

Query: 421  REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFTVIWV
Sbjct: 1190 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1249

Query: 481  VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
            V +RLTKSAHFV GKSTYT+SKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 1250 VVDRLTKSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 1304

[Close]

BLAST of Cmc06g0167791 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 488/535 (91.21%), Postives = 499/535 (93.27%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDVLIYSKTEAEHEEYLRMVLQTLRDNK 60
           MSFGLTNA AVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTEAEHEE+LRMVLQTLRDNK
Sbjct: 212 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 271

Query: 61  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDLAKIEAVISWTRPSTVSEVRSFLGLAGYYR 120
           LYAKFSKCEFWLKQVSFLGHVVSKAGVSVD AKIEAV  WTRPSTVSEVRSFLGLAGYYR
Sbjct: 272 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 331

Query: 121 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD---------- 180
           RFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD          
Sbjct: 332 RFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 391

Query: 181 -------------GKVVAYASRQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIF 240
                        GKVVAYASRQLKSHEQNYPTHDLEL AVVFALKIWRHYLYGEKIQIF
Sbjct: 392 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 451

Query: 241 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 300
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 452 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 511

Query: 301 QAPLHRDLERAEIAVSVRAVTMQLAQLTVQPTLRQKIINAQRNDPYLVEKRGLAEAGQAV 360
           QAPLHRDLERAEIAVSV AVTMQLAQLTVQPTLRQ+II+AQ NDPYLVEKRGLAEAGQAV
Sbjct: 512 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 571

Query: 361 EFSISSDGGLLFERRLCVPSDSAVKTELLSEANSSPFSMHPGSTKMYQDLKRVYWWRNMK 420
           EFS+SSDGGLLFERRLCVPSDSAVKTELL+EA+SSPFSMHPGSTKMYQDLKR+YWWRNMK
Sbjct: 572 EFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMK 631

Query: 421 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWV 480
           REVAEFVSKCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GLPRTLRGFTVIWV
Sbjct: 632 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWV 691

Query: 481 VANRLTKSAHFVLGKSTYTASKWAQLYMSEIVRLHGMPVSIVSDRDARFTSKFLK 513
           V +RLTKSAHFV GKSTYT SKWAQLYMSEIVRLHG+PVSIVSDRDARFTSKF K
Sbjct: 692 VVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 746

[Close]

BLAST of Cmc06g0167791 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-25
Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 48  YLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDLAKIEAVISWTRPST 107
           +L MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS D AK+EA++ W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 167
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 168 LTVPDGKV 174
           L +PD K+
Sbjct: 123 LALPDLKL 129

The following BLAST results are available for this feature:

BLAST of Cmc06g0167791 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	7.9e-277	91.40	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	7.9e-277	91.59	pol protein [Cucumis melo var. makuwa]	[more]
KAA0042119.1	7.9e-277	91.40	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	1.0e-276	91.40	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	2.3e-276	91.21	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0167791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	5.1e-69	30.16	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.1e-69	30.16	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.1e-69	30.16	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	5.1e-69	30.16	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	5.1e-69	30.16	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0167791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPI1	3.8e-277	91.59	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	3.8e-277	91.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7TLA3	3.8e-277	91.40	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005990 PE...	[more]
A0A5A7V1N3	5.0e-277	91.40	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5A7UP94	1.1e-276	91.21	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]

BLAST of Cmc06g0167791 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.7e-25	43.75	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..81 e-value: 1.7E-13 score: 50.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 8.752624
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 359..415 e-value: 3.4E-15 score: 55.8
None	No IPR available	GENE3D	1.10.340.70		coord: 324..414 e-value: 2.9E-16 score: 61.5
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 81..267
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 81..267
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.8559E-34 score: 125.786
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 171..268 e-value: 8.43235E-50 score: 164.973
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 2.2E-31 score: 110.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..182 e-value: 1.5E-31 score: 110.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 423..514 e-value: 2.4E-14 score: 55.1
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 172..246 e-value: 2.2E-26 score: 92.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..252
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 427..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0167791.1	Cmc06g0167791.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding