Cmc06g0167741 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0167741
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 21051518 .. 21052741 (+)
RNA-Seq Expression	Cmc06g0167741
Synteny	Cmc06g0167741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGACGTTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAGGAATTTCTGGCCGAGTTCGACTTTGAATTTGAACACAAGAAGGGGTCGAACAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCTGCCATATGCTTATTAGCTCACCTTCGGGGGAGCGACAATAGCGGGTCGGTTAGAGACACCTTGAGAGAGTTTCTACAGAAGGATCATGCCGCTCAGAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACAGTTTTGGGTCGAGGAAGACTTGTTAGTCACAAAGGGCAATCGACTGTATGTTCCAAGAGTAGGGGACTTAAGGAAGAAATTGTTGTATGAGTGTCACGACACTCTATGGGCTGGCCATCCCGGATGGCAACGGACGTACGCCCTGTTGAAGAAGGGCTACTTTTGGCCGAATATGAGAGATGATGTCATGCAATACACTAAGACATGTCTCATCTGCCAACAAGACAAAGTAGAGAAAGTGAAGGTTGCTGGACTTCTCGACCCTCTACCGGTTCCAACAAGACCTTGGGAGAGTGTCTCCATGGACCTCATCACCCATCTTCCTAAGGTAGGCGACTTTGAAGCCATCTTAGTCATCATTGATCGTTTTTCAAAGTACACCACCTTCATCCTCACCACCAAGCAGTGTTCAGTAGAAATGACAGCTGAATTGTTCTTTAAGCATGTTGTTAAGTTGTGGGGAGTCCCGACAAGTATAGTGAGCGACAGAGATGGTAGATTCATTGGCTCCTTCTGGACGGAATTATTTTCCTTCTTAGGGACAAGTCTGAACATATCCTCAAGCTACGATCCCCAAACTGACGGCCAGACTGAGCGATTCAACTGCATGCTCGAAGAATACTTGCGCCATTTTGTAAACGCAAGGCAAAAGAACTGGGTCCAGCTGTTGGACGTAGCCCAATTCTGTTTCAACGCTCAGACAAGTTCATCTACAGGGAGAAGCCCATTTGAGATTGTTTCTGGGAGACAACCAGTACTACCACACCTTGTTGATCATCCCTTTGCAGGGAAGAACCCTCAAACCCTCAATTTCACGAAGGAGTGGAACAGACAAACAGATGAAGAAGTGGGCAGATAA

mRNA sequence

ATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGACGTTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAGGAATTTCTGGCCGAGTTCGACTTTGAATTTGAACACAAGAAGGGGTCGAACAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCTGCCATATGCTTATTAGCTCACCTTCGGGGGAGCGACAATAGCGGGTCGGTTAGAGACACCTTGAGAGAGTTTCTACAGAAGGATCATGCCGCTCAGAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACAGTTTTGGGTCGAGGAAGACTTGTTAGTCACAAAGGGCAATCGACTGTATGTTCCAAGAGTAGGGGACTTAAGGAAGAAATTGTTGTATGAGTGTCACGACACTCTATGGGCTGGCCATCCCGGATGGCAACGGACGTACGCCCTGTTGAAGAAGGGCTACTTTTGGCCGAATATGAGAGATGATGTCATGCAATACACTAAGACATGTCTCATCTGCCAACAAGACAAAGTAGAGAAAGTGAAGGTTGCTGGACTTCTCGACCCTCTACCGGTTCCAACAAGACCTTGGGAGAGTGTCTCCATGGACCTCATCACCCATCTTCCTAAGGTAGGCGACTTTGAAGCCATCTTAGTCATCATTGATCGTTTTTCAAAGTACACCACCTTCATCCTCACCACCAAGCAGTGTTCAGTAGAAATGACAGCTGAATTGTTCTTTAAGCATGTTGTTAAGTTGTGGGGAGTCCCGACAAGTATAGTGAGCGACAGAGATGGTAGATTCATTGGCTCCTTCTGGACGGAATTATTTTCCTTCTTAGGGACAAGTCTGAACATATCCTCAAGCTACGATCCCCAAACTGACGGCCAGACTGAGCGATTCAACTGCATGCTCGAAGAATACTTGCGCCATTTTGTAAACGCAAGGCAAAAGAACTGGGTCCAGCTGTTGGACGTAGCCCAATTCTGTTTCAACGCTCAGACAAGTTCATCTACAGGGAGAAGCCCATTTGAGATTGTTTCTGGGAGACAACCAGTACTACCACACCTTGTTGATCATCCCTTTGCAGGGAAGAACCCTCAAACCCTCAATTTCACGAAGGAGTGGAACAGACAAACAGATGAAGAAGTGGGCAGATAA

Coding sequence (CDS)

ATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTACTAGGTTCGACGTTTGTAGTGAAGACGGACAACAGTGCAACCTGCCACTTCTTTACCCAGCCAAAGTTGACTTCGAAACAAGCAAGATGGCAGGAATTTCTGGCCGAGTTCGACTTTGAATTTGAACACAAGAAGGGGTCGAACAACCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATGCTGCCATATGCTTATTAGCTCACCTTCGGGGGAGCGACAATAGCGGGTCGGTTAGAGACACCTTGAGAGAGTTTCTACAGAAGGATCATGCCGCTCAGAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACAGTTTTGGGTCGAGGAAGACTTGTTAGTCACAAAGGGCAATCGACTGTATGTTCCAAGAGTAGGGGACTTAAGGAAGAAATTGTTGTATGAGTGTCACGACACTCTATGGGCTGGCCATCCCGGATGGCAACGGACGTACGCCCTGTTGAAGAAGGGCTACTTTTGGCCGAATATGAGAGATGATGTCATGCAATACACTAAGACATGTCTCATCTGCCAACAAGACAAAGTAGAGAAAGTGAAGGTTGCTGGACTTCTCGACCCTCTACCGGTTCCAACAAGACCTTGGGAGAGTGTCTCCATGGACCTCATCACCCATCTTCCTAAGGTAGGCGACTTTGAAGCCATCTTAGTCATCATTGATCGTTTTTCAAAGTACACCACCTTCATCCTCACCACCAAGCAGTGTTCAGTAGAAATGACAGCTGAATTGTTCTTTAAGCATGTTGTTAAGTTGTGGGGAGTCCCGACAAGTATAGTGAGCGACAGAGATGGTAGATTCATTGGCTCCTTCTGGACGGAATTATTTTCCTTCTTAGGGACAAGTCTGAACATATCCTCAAGCTACGATCCCCAAACTGACGGCCAGACTGAGCGATTCAACTGCATGCTCGAAGAATACTTGCGCCATTTTGTAAACGCAAGGCAAAAGAACTGGGTCCAGCTGTTGGACGTAGCCCAATTCTGTTTCAACGCTCAGACAAGTTCATCTACAGGGAGAAGCCCATTTGAGATTGTTTCTGGGAGACAACCAGTACTACCACACCTTGTTGATCATCCCTTTGCAGGGAAGAACCCTCAAACCCTCAATTTCACGAAGGAGTGGAACAGACAAACAGATGAAGAAGTGGGCAGATAA

Protein sequence

MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKKGSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNMRDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILVIIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSFLGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTDEEVGR

Homology

[Close]

BLAST of Cmc06g0167741 vs. NCBI nr
Match: KAA0052269.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 809.3 bits (2089), Expect = 1.5e-230
Identity = 387/402 (96.27%), Postives = 390/402 (97.01%), Query Frame = 0


Query: 1   MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
           MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKK
Sbjct: 1   MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKK 60

Query: 61  GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
           GSNNQAADALSRKQEHAAICLLAHLRGS+  GSVRDTLREFLQKDHAAQNVMNLVKAGKT
Sbjct: 61  GSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120

Query: 121 RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
           RQFWVEEDLLVTKGNRLYVPR GDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 121 RQFWVEEDLLVTKGNRLYVPRAGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180

Query: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
           RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 240

Query: 241 IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
           IIDRFSKY TFI TTKQCS EMTA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 241 IIDRFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300

Query: 301 LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
           LGTSLNISSSY PQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 301 LGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360

Query: 361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
           GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW + TD
Sbjct: 361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWKQTTD 402

[Close]

BLAST of Cmc06g0167741 vs. NCBI nr
Match: TYK01597.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 807.4 bits (2084), Expect = 5.8e-230
Identity = 386/402 (96.02%), Postives = 390/402 (97.01%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
            MLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK
Sbjct: 984  MLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 1043

Query: 61   GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
            GSNNQAADALSRKQEHAAICLLAHLRGS+  GSVRDTLREFLQKDHAAQNVMNLVKAGKT
Sbjct: 1044 GSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHAAQNVMNLVKAGKT 1103

Query: 121  RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
            RQFWVEEDLLVTKGNRLYVPR GDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 1104 RQFWVEEDLLVTKGNRLYVPRAGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 1163

Query: 181  RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
            RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 1164 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 1223

Query: 241  IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
            IIDRFSKY TFI TTKQCS EMTA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 1224 IIDRFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 1283

Query: 301  LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
            LGTSLNISSSY PQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 1284 LGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 1343

Query: 361  GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
            GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW +  D
Sbjct: 1344 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWKQTND 1385

[Close]

BLAST of Cmc06g0167741 vs. NCBI nr
Match: TYK01832.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 795.0 bits (2052), Expect = 3.0e-226
Identity = 380/402 (94.53%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1   MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
           M AVVHCLRAWRQYLLGSTFVVKTDNSA CHFFTQPKLTSKQARWQEFL EFDFEFEHKK
Sbjct: 1   MPAVVHCLRAWRQYLLGSTFVVKTDNSANCHFFTQPKLTSKQARWQEFLVEFDFEFEHKK 60

Query: 61  GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
           GSNNQAADALSRKQEHAAICLLAHLRGS+  GSVRDTLREFLQKDH AQNVMNLVK GKT
Sbjct: 61  GSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNVMNLVKPGKT 120

Query: 121 RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
           RQFWVEEDLLVTKGNRLYVPR  DLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 121 RQFWVEEDLLVTKGNRLYVPRAEDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180

Query: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
           RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 240

Query: 241 IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
           IIDRFSKY TFI TTKQCS EMTA+LFFKHVVKLWGVP+SIVSDRDGRFIGSFWTELFSF
Sbjct: 241 IIDRFSKYATFIPTTKQCSTEMTAQLFFKHVVKLWGVPSSIVSDRDGRFIGSFWTELFSF 300

Query: 301 LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
           LGTSLNISSSY PQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 301 LGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360

Query: 361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
           GRSPFEIVSGR+PVLPHLVDHPFAGKNPQ LNFTKEW + TD
Sbjct: 361 GRSPFEIVSGRRPVLPHLVDHPFAGKNPQALNFTKEWKQTTD 402

[Close]

BLAST of Cmc06g0167741 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 791.6 bits (2043), Expect = 3.3e-225
Identity = 379/402 (94.28%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
            MLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK
Sbjct: 1001 MLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 1060

Query: 61   GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
            GS+NQAADALSRKQEHAAICLLAHL+GS+  GSVRDTLREFLQKDHAAQNVMNL KAGKT
Sbjct: 1061 GSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKT 1120

Query: 121  RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
            RQFWVEEDLLVTKGNRLYVPR G LRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 1121 RQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 1180

Query: 181  RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
            RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 1181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 1240

Query: 241  IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
            IIDRFSKY TFI  TKQCS E TA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 1241 IIDRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 1300

Query: 301  LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
            LGTSLNISSSY PQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 1301 LGTSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 1360

Query: 361  GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
            GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW +  D
Sbjct: 1361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTND 1402

[Close]

BLAST of Cmc06g0167741 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 791.6 bits (2043), Expect = 3.3e-225
Identity = 379/402 (94.28%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
            MLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK
Sbjct: 1005 MLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 1064

Query: 61   GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
            GS+NQAADALSRKQEHAAICLLAHL+GS+  GSVRDTLREFLQKDHAAQNVMNL KAGKT
Sbjct: 1065 GSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKT 1124

Query: 121  RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
            RQFWVEEDLLVTKGNRLYVPR G LRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 1125 RQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 1184

Query: 181  RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
            RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 1185 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 1244

Query: 241  IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
            IIDRFSKY TFI  TKQCS E TA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 1245 IIDRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 1304

Query: 301  LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
            LGTSLNISSSY PQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 1305 LGTSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 1364

Query: 361  GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
            GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW +  D
Sbjct: 1365 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTND 1406

[Close]

BLAST of Cmc06g0167741 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-49
Identity = 121/404 (29.95%), Postives = 194/404 (48.02%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFE 60
            MLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLARWQLFLQDFNFE 815

Query: 61   FEHKKGSNNQAADALSR----------KQEHAAICLLAHLRGSDNSGSVRDTLREFLQKD 120
              ++ GS N  ADALSR            E  +I  +  +  +D+    ++ +      D
Sbjct: 816  INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD---FKNQVVTEYTND 875

Query: 121  HAAQNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQ 180
                N++N           +++ LL+   +++ +P    L + ++ + H+     HPG +
Sbjct: 876  TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 935

Query: 181  RTYALLKKGYFWPNMRDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDL 240
                ++ + + W  +R  + +Y + C  CQ +K    K  G L P+P   RPWES+SMD 
Sbjct: 936  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 995

Query: 241  ITHLPKVGDFEAILVIIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDR 300
            IT LP+   + A+ V++DRFSK    +  TK  + E TA +F + V+  +G P  I++D 
Sbjct: 996  ITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADN 1055

Query: 301  DGRFIGSFWTELFSFLGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLL 360
            D  F    W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  +
Sbjct: 1056 DHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHI 1115

Query: 361  DVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHPFAGKNPQ 390
             + Q  +N    S+T  +PFEIV    P L  L    F+ K  +
Sbjct: 1116 SLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDE 1155

[Close]

BLAST of Cmc06g0167741 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-49
Identity = 121/404 (29.95%), Postives = 194/404 (48.02%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFE 60
            MLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLARWQLFLQDFNFE 815

Query: 61   FEHKKGSNNQAADALSR----------KQEHAAICLLAHLRGSDNSGSVRDTLREFLQKD 120
              ++ GS N  ADALSR            E  +I  +  +  +D+    ++ +      D
Sbjct: 816  INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD---FKNQVVTEYTND 875

Query: 121  HAAQNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQ 180
                N++N           +++ LL+   +++ +P    L + ++ + H+     HPG +
Sbjct: 876  TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 935

Query: 181  RTYALLKKGYFWPNMRDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDL 240
                ++ + + W  +R  + +Y + C  CQ +K    K  G L P+P   RPWES+SMD 
Sbjct: 936  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 995

Query: 241  ITHLPKVGDFEAILVIIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDR 300
            IT LP+   + A+ V++DRFSK    +  TK  + E TA +F + V+  +G P  I++D 
Sbjct: 996  ITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADN 1055

Query: 301  DGRFIGSFWTELFSFLGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLL 360
            D  F    W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  +
Sbjct: 1056 DHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHI 1115

Query: 361  DVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHPFAGKNPQ 390
             + Q  +N    S+T  +PFEIV    P L  L    F+ K  +
Sbjct: 1116 SLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDE 1155

[Close]

BLAST of Cmc06g0167741 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-49
Identity = 121/404 (29.95%), Postives = 194/404 (48.02%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFE 60
            MLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLARWQLFLQDFNFE 815

Query: 61   FEHKKGSNNQAADALSR----------KQEHAAICLLAHLRGSDNSGSVRDTLREFLQKD 120
              ++ GS N  ADALSR            E  +I  +  +  +D+    ++ +      D
Sbjct: 816  INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD---FKNQVVTEYTND 875

Query: 121  HAAQNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQ 180
                N++N           +++ LL+   +++ +P    L + ++ + H+     HPG +
Sbjct: 876  TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 935

Query: 181  RTYALLKKGYFWPNMRDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDL 240
                ++ + + W  +R  + +Y + C  CQ +K    K  G L P+P   RPWES+SMD 
Sbjct: 936  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 995

Query: 241  ITHLPKVGDFEAILVIIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDR 300
            IT LP+   + A+ V++DRFSK    +  TK  + E TA +F + V+  +G P  I++D 
Sbjct: 996  ITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADN 1055

Query: 301  DGRFIGSFWTELFSFLGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLL 360
            D  F    W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  +
Sbjct: 1056 DHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHI 1115

Query: 361  DVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHPFAGKNPQ 390
             + Q  +N    S+T  +PFEIV    P L  L    F+ K  +
Sbjct: 1116 SLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDE 1155

[Close]

BLAST of Cmc06g0167741 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-49
Identity = 121/404 (29.95%), Postives = 194/404 (48.02%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFE 60
            MLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLARWQLFLQDFNFE 815

Query: 61   FEHKKGSNNQAADALSR----------KQEHAAICLLAHLRGSDNSGSVRDTLREFLQKD 120
              ++ GS N  ADALSR            E  +I  +  +  +D+    ++ +      D
Sbjct: 816  INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD---FKNQVVTEYTND 875

Query: 121  HAAQNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQ 180
                N++N           +++ LL+   +++ +P    L + ++ + H+     HPG +
Sbjct: 876  TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 935

Query: 181  RTYALLKKGYFWPNMRDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDL 240
                ++ + + W  +R  + +Y + C  CQ +K    K  G L P+P   RPWES+SMD 
Sbjct: 936  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 995

Query: 241  ITHLPKVGDFEAILVIIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDR 300
            IT LP+   + A+ V++DRFSK    +  TK  + E TA +F + V+  +G P  I++D 
Sbjct: 996  ITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADN 1055

Query: 301  DGRFIGSFWTELFSFLGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLL 360
            D  F    W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  +
Sbjct: 1056 DHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHI 1115

Query: 361  DVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHPFAGKNPQ 390
             + Q  +N    S+T  +PFEIV    P L  L    F+ K  +
Sbjct: 1116 SLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDE 1155

[Close]

BLAST of Cmc06g0167741 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-49
Identity = 121/404 (29.95%), Postives = 194/404 (48.02%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGS--TFVVKTDNSATCHFFT---QPKLTSKQARWQEFLAEFDFE 60
            MLA++  L+ WR YL  +   F + TD+       T   +P+   + ARWQ FL +F+FE
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPE-NKRLARWQLFLQDFNFE 815

Query: 61   FEHKKGSNNQAADALSR----------KQEHAAICLLAHLRGSDNSGSVRDTLREFLQKD 120
              ++ GS N  ADALSR            E  +I  +  +  +D+    ++ +      D
Sbjct: 816  INYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD---FKNQVVTEYTND 875

Query: 121  HAAQNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQ 180
                N++N           +++ LL+   +++ +P    L + ++ + H+     HPG +
Sbjct: 876  TKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIE 935

Query: 181  RTYALLKKGYFWPNMRDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDL 240
                ++ + + W  +R  + +Y + C  CQ +K    K  G L P+P   RPWES+SMD 
Sbjct: 936  LLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDF 995

Query: 241  ITHLPKVGDFEAILVIIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDR 300
            IT LP+   + A+ V++DRFSK    +  TK  + E TA +F + V+  +G P  I++D 
Sbjct: 996  ITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADN 1055

Query: 301  DGRFIGSFWTELFSFLGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLL 360
            D  F    W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  +
Sbjct: 1056 DHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHI 1115

Query: 361  DVAQFCFNAQTSSSTGRSPFEIVSGRQPVLPHLVDHPFAGKNPQ 390
             + Q  +N    S+T  +PFEIV    P L  L    F+ K  +
Sbjct: 1116 SLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDE 1155

[Close]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL
Match: A0A5A7UFL8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00950 PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 7.3e-231
Identity = 387/402 (96.27%), Postives = 390/402 (97.01%), Query Frame = 0


Query: 1   MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
           MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFL EFDFEFEHKK
Sbjct: 1   MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLVEFDFEFEHKK 60

Query: 61  GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
           GSNNQAADALSRKQEHAAICLLAHLRGS+  GSVRDTLREFLQKDHAAQNVMNLVKAGKT
Sbjct: 61  GSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120

Query: 121 RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
           RQFWVEEDLLVTKGNRLYVPR GDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 121 RQFWVEEDLLVTKGNRLYVPRAGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180

Query: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
           RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 240

Query: 241 IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
           IIDRFSKY TFI TTKQCS EMTA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 241 IIDRFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300

Query: 301 LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
           LGTSLNISSSY PQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 301 LGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360

Query: 361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
           GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW + TD
Sbjct: 361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWKQTTD 402

[Close]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL
Match: A0A5D3BQE4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001890 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 2.8e-230
Identity = 386/402 (96.02%), Postives = 390/402 (97.01%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
            MLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK
Sbjct: 984  MLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 1043

Query: 61   GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
            GSNNQAADALSRKQEHAAICLLAHLRGS+  GSVRDTLREFLQKDHAAQNVMNLVKAGKT
Sbjct: 1044 GSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHAAQNVMNLVKAGKT 1103

Query: 121  RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
            RQFWVEEDLLVTKGNRLYVPR GDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 1104 RQFWVEEDLLVTKGNRLYVPRAGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 1163

Query: 181  RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
            RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 1164 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 1223

Query: 241  IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
            IIDRFSKY TFI TTKQCS EMTA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 1224 IIDRFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 1283

Query: 301  LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
            LGTSLNISSSY PQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 1284 LGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 1343

Query: 361  GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
            GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW +  D
Sbjct: 1344 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWKQTND 1385

[Close]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL
Match: A0A5D3BSP5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00750 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.4e-226
Identity = 380/402 (94.53%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1   MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
           M AVVHCLRAWRQYLLGSTFVVKTDNSA CHFFTQPKLTSKQARWQEFL EFDFEFEHKK
Sbjct: 1   MPAVVHCLRAWRQYLLGSTFVVKTDNSANCHFFTQPKLTSKQARWQEFLVEFDFEFEHKK 60

Query: 61  GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
           GSNNQAADALSRKQEHAAICLLAHLRGS+  GSVRDTLREFLQKDH AQNVMNLVK GKT
Sbjct: 61  GSNNQAADALSRKQEHAAICLLAHLRGSEIGGSVRDTLREFLQKDHVAQNVMNLVKPGKT 120

Query: 121 RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
           RQFWVEEDLLVTKGNRLYVPR  DLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 121 RQFWVEEDLLVTKGNRLYVPRAEDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180

Query: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
           RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 181 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 240

Query: 241 IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
           IIDRFSKY TFI TTKQCS EMTA+LFFKHVVKLWGVP+SIVSDRDGRFIGSFWTELFSF
Sbjct: 241 IIDRFSKYATFIPTTKQCSTEMTAQLFFKHVVKLWGVPSSIVSDRDGRFIGSFWTELFSF 300

Query: 301 LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
           LGTSLNISSSY PQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 301 LGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360

Query: 361 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
           GRSPFEIVSGR+PVLPHLVDHPFAGKNPQ LNFTKEW + TD
Sbjct: 361 GRSPFEIVSGRRPVLPHLVDHPFAGKNPQALNFTKEWKQTTD 402

[Close]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.6e-225
Identity = 379/402 (94.28%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
            MLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK
Sbjct: 1005 MLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 1064

Query: 61   GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
            GS+NQAADALSRKQEHAAICLLAHL+GS+  GSVRDTLREFLQKDHAAQNVMNL KAGKT
Sbjct: 1065 GSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKT 1124

Query: 121  RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
            RQFWVEEDLLVTKGNRLYVPR G LRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 1125 RQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 1184

Query: 181  RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
            RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 1185 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 1244

Query: 241  IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
            IIDRFSKY TFI  TKQCS E TA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 1245 IIDRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 1304

Query: 301  LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
            LGTSLNISSSY PQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 1305 LGTSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 1364

Query: 361  GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
            GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW +  D
Sbjct: 1365 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTND 1406

[Close]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.6e-225
Identity = 379/402 (94.28%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1    MLAVVHCLRAWRQYLLGSTFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 60
            MLAVVHCLRAWRQYLLGS+FVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK
Sbjct: 1005 MLAVVHCLRAWRQYLLGSSFVVKTDNSATCHFFTQPKLTSKQARWQEFLAEFDFEFEHKK 1064

Query: 61   GSNNQAADALSRKQEHAAICLLAHLRGSDNSGSVRDTLREFLQKDHAAQNVMNLVKAGKT 120
            GS+NQAADALSRKQEHAAICLLAHL+GS+  GSVRDTLREFLQKDHAAQNVMNL KAGKT
Sbjct: 1065 GSSNQAADALSRKQEHAAICLLAHLQGSEIGGSVRDTLREFLQKDHAAQNVMNLAKAGKT 1124

Query: 121  RQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 180
            RQFWVEEDLLVTKGNRLYVPR G LRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM
Sbjct: 1125 RQFWVEEDLLVTKGNRLYVPRAGGLRKKLLYECHDTLWAGHPGWQRTYALLKKGYFWPNM 1184

Query: 181  RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDLITHLPKVGDFEAILV 240
            RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMD ITHLPKVGDFEAILV
Sbjct: 1185 RDDVMQYTKTCLICQQDKVEKVKVAGLLDPLPVPTRPWESVSMDFITHLPKVGDFEAILV 1244

Query: 241  IIDRFSKYTTFILTTKQCSVEMTAELFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 300
            IIDRFSKY TFI  TKQCS E TA+LFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF
Sbjct: 1245 IIDRFSKYATFIPATKQCSAETTAQLFFKHVVKLWGVPTSIVSDRDGRFIGSFWTELFSF 1304

Query: 301  LGTSLNISSSYDPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 360
            LGTSLNISSSY PQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST
Sbjct: 1305 LGTSLNISSSYHPQTDGQTERFNSMLEEYLRHFVNARQKNWVQLLDVAQFCFNAQTSSST 1364

Query: 361  GRSPFEIVSGRQPVLPHLVDHPFAGKNPQTLNFTKEWNRQTD 403
            GRSPFEIVSGRQPVLPHLVDHPFAGKNPQ LNFTKEW +  D
Sbjct: 1365 GRSPFEIVSGRQPVLPHLVDHPFAGKNPQALNFTKEWRQTND 1406

The following BLAST results are available for this feature:

BLAST of Cmc06g0167741 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052269.1	1.5e-230	96.27	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01597.1	5.8e-230	96.02	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01832.1	3.0e-226	94.53	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	3.3e-225	94.28	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037220.1	3.3e-225	94.28	reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta...	[more]

BLAST of Cmc06g0167741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.6e-49	29.95	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.6e-49	29.95	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.6e-49	29.95	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.6e-49	29.95	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.6e-49	29.95	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFL8	7.3e-231	96.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20...	[more]
A0A5D3BQE4	2.8e-230	96.02	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5D3BSP5	1.4e-226	94.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3C4R1	1.6e-225	94.28	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	1.6e-225	94.28	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc06g0167741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 144..198 e-value: 5.7E-21 score: 74.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 209..404 e-value: 5.1E-44 score: 151.9
None	No IPR available	GENE3D	1.10.340.70		coord: 107..198 e-value: 4.1E-21 score: 77.0
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 2..73 coord: 135..373
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 1..73 e-value: 1.27273E-33 score: 119.905
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 1..52 e-value: 3.1E-11 score: 43.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 213..372 score: 22.016014
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 209..366
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0167741.1	Cmc06g0167741.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding