Cmc06g0160651 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0160651
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	thylakoid lumenal 17.4 kDa protein, chloroplastic
Location	CMiso1.1chr06: 9008530 .. 9012286 (-)
RNA-Seq Expression	Cmc06g0160651
Synteny	Cmc06g0160651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATATTTTTCTTCCGGATGCAAACAGATATCCCAAGGCATAATCTACGTGTACTGCCACGTGATCAAGATCAGATGCCCCAACATCTTCGAACGGATAAGTCAAGCCAGAGTGAGGGAGGGGGAGGGAATTCAATTTTTCCAAATGGCCACTTTATCAATTCCCCCCTCTCAAAATGGTTTCTCTCGCAGCTTCTTCTCTACAAAACGCCCACAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTCTTTTCTCTATCTCCTCTATCTCTAGTTTTATGCATTGATTTACTCCAATAATTGCTACATTCAGTGCCCTTTTGTGGGTAAATTGCGTTATGTTCCTGTCCTTTGATTGCCTATTACATCTTGTTCAGCTTAGGATCAAGATGCTGGTTCGCCAAATAGGTTAATTCTTTGAATGAGTTCAAATTTGTAACGAAAGAATTCATGTGTTTGCATATCCTGAAATGTACTTAGTCTAATACAATTAGATGGTATTTGGTGCGCTGAGTTGAGTTCTAAAGTGTGGAATTAATATGTTGAAATTAGTAAGTCTTATGTTAGAAATGCAATGTTGTTTAGTTTGGAGATAGTAAGCATTAGAAAGAGGGAGAGAGACAAAGAAGAAGATGAAGTTTATTGATAAATGTGTAAATTACAATAGTGAATGTTGTTGAAGTTGATGAAGTTGAGTTATATAACACCGACTTATGAAGTCGATGGGCTAAACACTCCCGTAGAAGTCTACACCACGTAGAGGGAAACAAATATCATGTAAATTGGACATTAAGAGGCTGTTTGGCCCACCGACTTCTAAACTGTTATAAACAACTCAATTTCAATAACAAACACAATTGAAGTTTGCACATTTATCGAGTAAACTTTTCTACCCCTATATTTTTACTTTTTACATTTATTGAGTAATTTTGTTTTTCGTCTTAATCTACTTTTCACAATTATCAACGAACTCCATCTTAGAACTCTATTGCCTCCATCTAACAACCCCAACTGACTAATTCCACTCAATTGGGCAAACACCCTAACTCCACTCAAATGGCCAAACACCCCTAGCTCCATTTTACAACACAAACTTACTAACTCCAACACATTACCTCTAGATTTATTAATTCCACTCAATTGGCCAAACACCCCTAACTGAACTTGCATTTAAGTATTCTGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTCGGTGCACTTACAGCTACCAGGGATGGGGCAAAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACCGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGGTTAATAGCATTTCTGTTCATTTATAGTTTATACTTTAAGTATGGTATTGTAAGAGTTTGTACCATAGATAAATTTTCATCTATTTGGAATATATGGATATAATAAAATTTACTGCAGTAATCCATCAACTCAAGTCCATGACAATTTACTGTAATATATTGATTAATTTTAATTTTTGCACTATTTTCTGTTGACTTGAAGTTTGTAGTGATTTAACGGTTGACACAACTTTTAGAATAATGACAAGCTATTCACATTTATCATGATATTTGGGTATGAGCTGAATATTCGCAAGCGCTATTCCAAACCCAAATCTACAATGTTGCATTGAAATTTAGGCTTCAGATGCAAGACCTAGTTATTTTTTTAGGGGGTTGAGTGTGTTGGTTTGGAAGCCCTACTTTTCCGGCTCCCTCACCATCATTCTGAGCTCACATCCCTTTCTGGATGTTCTACGATACCATGTGATTATAAGGCTCTTTCTGATAGGATAACTTGTCAGTTTTCCTGATTCTAACTAAAATTCAGTTATCTACTTCACCAGTTGACATACAGTTCATGTTACTCGATTTTCTTCTATTCATGTTATATTTTTCCTTTCACAGTCATGATTGACTAATGTTATTCACTTTTTGTCACAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTCATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAATACTATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGATGCAAAGTTCGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCATACCCCACCTCCTTGGAGGTGGGTTGTTAACAAATCTTTCAAGTCCATGTTTGAGAGTGATTTTATTAAGTTTGAAATCACTTTGAGACACATTTTTACTTACTCAAAATCAGTTCAACATCTAATTTTATACTTTTGGAAACATTATTCGTACTATTAAAATTCATTTTAAATGATTGAAAAACATTTTTGGGTGTTTTTTAAAATGATAAAAGTGATCTTAACATTTTTGAAAATCACTCCTAAACATCTCATTAGTTTGTATTTGAGAGTGATTTTATTAAGTTTGAAATCACTTTGAAACACATTTTTACTTAAAATCAGTTCAACATCTAATTTTATACTTTTGGAAACATTATTTGTACTATTAAAATTCATTTTAAATGATTGAAAAACATTTTTAAGTGTTTTTTAAAATGACAAAAGTGATCTTAACATTTTTTAAAATCACTCCTAAACATCTCATTAGTTTGTAGACTCTGCTTTCAATAGTTGATAATGGTTCATAGACAAAATTCACATGTTAAACATATGCTAGTTTCTAGAATAAATCCCAGGCTCCAAAACTATTTAGGAACGTGGATGATCTCACTTTAATTTTTAATTGAAATGAAACATAAAAAGATGTTTCATACTCTGCTCTCTTCTCGTGCTTCAAGTAAATTAATAGGAAGCCAAAAATGCATTCAAGTAGACTATTAAGAAGTGTCATGTCTATTGACCTATTAAGCCATGTGTGAATGCCATAATTGATCCTAAGCTGGTCAGTTGTGAATGCCATGGGTTTTCTAAAATTATTGGCTGGCTTGCCGTTTGGTTTTTGGTTTTTAGTTTTTGGAAATTGAGCCTATGAGCAATCATGCCACTTTAAAAAAGATATATACATTGTAAGAAAATAAGAGAAAATAAACTTAATCTTAAAAAACAAAGAATGAAATGGTTACCATATGGGTCCTTATGGTATATGTTTTCTGTTTTAAAGGGACTCCAAAGACTTTTGAAAAAAAACTCACAATATGGATTAAAATATCATGACAACGTTGCATATTGCAGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCGGGGTCAACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCATATATAGCTTCGGTACTTTCACTATTTGTATTGTATAATAAACAACTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATAAAAAGTGAACTCCCTCTTACTCCTATTG

mRNA sequence

ATGAAATATTTTTCTTCCGGATGCAAACAGATATCCCAAGGCATAATCTACGTGTACTGCCACGTGATCAAGATCAGATGCCCCAACATCTTCGAACGGATAAGTCAAGCCAGAGTGAGGGAGGGGGAGGGAATTCAATTTTTCCAAATGGCCACTTTATCAATTCCCCCCTCTCAAAATGGTTTCTCTCGCAGCTTCTTCTCTACAAAACGCCCACAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACCAGGGATGGGGCAAAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACCGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGAGGCTGCCTCCACTGTCTACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAATACTATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGATGCAAAGTTCGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCGGGGTCAACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCATATATAGCTTCGGTACTTTCACTATTTGTATTGTATAATAAACAACTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATAAAAAGTGAACTCCCTCTTACTCCTATTG

Coding sequence (CDS)

ATGAAATATTTTTCTTCCGGATGCAAACAGATATCCCAAGGCATAATCTACGTGTACTGCCACGTGATCAAGATCAGATGCCCCAACATCTTCGAACGGATAAGTCAAGCCAGAGTGAGGGAGGGGGAGGGAATTCAATTTTTCCAAATGGCCACTTTATCAATTCCCCCCTCTCAAAATGGTTTCTCTCGCAGCTTCTTCTCTACAAAACGCCCACAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACCAGGGATGGGGCAAAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACCGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGAGGCTGCCTCCACTGTCTACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAATACTATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGATGCAAAGTTCGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCGGGGTCAACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MKYFSSGCKQISQGIIYVYCHVIKIRCPNIFERISQARVREGEGIQFFQMATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of Cmc06g0160651 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 109
           MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 110 ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 169
           ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 170 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 229
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 230 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

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BLAST of Cmc06g0160651 vs. NCBI nr
Match: XP_011651313.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 hypothetical protein Csa_010496 [Cucumis sativus])

HSP 1 Score: 459.9 bits (1182), Expect = 1.6e-125
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 109
           MA LS P S NGFSRSFFST+R +IVYPFPHSLPRITCSATRDGA+PRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 110 ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 169
           ACGLLAVWALTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 170 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 229
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 230 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           NLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

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BLAST of Cmc06g0160651 vs. NCBI nr
Match: XP_038885483.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 454.5 bits (1168), Expect = 6.7e-124
Identity = 224/237 (94.51%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 109
           MATLSIP SQNGFSR FFS KRPQI+YPFPHSLPRITCSATR+GA+PRENL PCKHISTV
Sbjct: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRNGAEPRENLPPCKHISTV 60

Query: 110 ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 169
           ACGLLAVW L NTSPVIAA+QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLANTSPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 170 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 229
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF KA
Sbjct: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFEKA 180

Query: 230 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           NLQGALFKNTVLSGSTFD+AQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDNAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

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BLAST of Cmc06g0160651 vs. NCBI nr
Match: XP_022984509.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 6.9e-121
Identity = 223/254 (87.80%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 33  RISQARVREGEGIQFFQMATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRD 92
           R  ++  R G G   FQMATLSIP SQNGFSR FFS K P I+ PF HSL RI+CSA RD
Sbjct: 25  RTDKSAERAG-GNSSFQMATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRD 84

Query: 93  GAKPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIG 152
           GA+PRE+LSPC HI +VACGLLAVWALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIG
Sbjct: 85  GAEPRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIG 144

Query: 153 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 212
           QANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK
Sbjct: 145 QANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 204

Query: 213 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 272
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN
Sbjct: 205 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 264

Query: 273 PTISPEGRAELGCR 287
           PTISPEGRAELGCR
Sbjct: 265 PTISPEGRAELGCR 277

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BLAST of Cmc06g0160651 vs. NCBI nr
Match: XP_022923067.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 442.2 bits (1136), Expect = 3.4e-120
Identity = 225/262 (85.88%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 25  IRCPNIFERISQARVREGEGIQFFQMATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPR 84
           IR     ER S+   R GE   FFQMATLSIP SQNGFSR FFS K P +  PF HSL  
Sbjct: 24  IRTDKSAERASE---RAGEN-SFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAP 83

Query: 85  ITCSATRDGAKPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCER 144
           I+CSA RDGA PRE+LSPC HI +VACGLLAVWALTNTSP  AANQRLPPLSTEPNRCER
Sbjct: 84  ISCSANRDGAVPRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCER 143

Query: 145 AFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKA 204
           AFVGNTIGQANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKA
Sbjct: 144 AFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKA 203

Query: 205 YAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYI 264
           YAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYI
Sbjct: 204 YAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYI 263

Query: 265 DLQKLCVNPTISPEGRAELGCR 287
           DLQKLCVNPTISPEGRAELGCR
Sbjct: 264 DLQKLCVNPTISPEGRAELGCR 281

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BLAST of Cmc06g0160651 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 301.6 bits (771), Expect = 9.5e-81
Identity = 153/240 (63.75%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSA---TRDGAKPRENLSPCKHI 109
           MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 110 STVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 169
            ++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 170 CDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 229
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 230 GKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           GK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

[Close]

BLAST of Cmc06g0160651 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-11
Identity = 67/246 (27.24%), Postives = 109/246 (44.31%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSA-----TRDGAKPRENLSPCK 109
           M +L I  S +  SRS +  +R        + L R+  S+      +D +  RE      
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQR--------YLLRRLQLSSRSNLEIKDSSNTREGCCSSA 70

Query: 110 HISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDL 169
             +T    L A  A    + VIA++  +P ++ E NR E A      G  +       DL
Sbjct: 71  ESNTWKRILSAAMA----AAVIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADL 130

Query: 170 RFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV 229
               ++NE    +  +  +A M ++ F G+  +   + KA A  A+F G D S+ ++DR+
Sbjct: 131 SKTVHSNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRM 190

Query: 230 NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEG 286
              +ANL  A+   +VL+ S    A+++ A F D +I  +  Q LC      NP    + 
Sbjct: 191 VLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDT 240

[Close]

BLAST of Cmc06g0160651 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.8e-07
Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 178 GKSLAAAL-----MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 237
           GKSL  A      ++D+ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 238 GALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 287
            A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

[Close]

BLAST of Cmc06g0160651 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 175 QLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA 234
           Q+    L  A ++ A    ADL++  +  A+AV  +FKG   S A L       ANL+GA
Sbjct: 91  QMNWADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----AHANLRGA 150

Query: 235 LFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 273
             + T L+G+    A L++A F+     + +LQ+ C++
Sbjct: 151 NLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

[Close]

BLAST of Cmc06g0160651 vs. ExPASy Swiss-Prot
Match: Q8Z4G9 (Secreted effector protein PipB2 OS=Salmonella typhi OX=90370 GN=pipB2 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.5e-04
Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 176 LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAL 235
           L G +L A  + DA   GADL   ++  A   GA+FKG + S A L     G +NL  A 
Sbjct: 159 LTGANLTAENLCDADLSGADLEGAILFMADCDGANFKGANLSGASL-----GDSNLTNAC 218

Query: 236 FKNTVLSGSTFDDAQLQDAVFEDT 260
            +++++ G+T D A L  A  + T
Sbjct: 219 LEDSIMCGATLDRANLTGANLQHT 237

[Close]

BLAST of Cmc06g0160651 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.2e-132
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 109
           MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 110 ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 169
           ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 170 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 229
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 230 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cmc06g0160651 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.7e-126
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 109
           MA LS P S NGFSRSFFST+R +IVYPFPHSLPRITCSATRDGA+PRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 110 ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 169
           ACGLLAVWALTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 170 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 229
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 230 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           NLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Cmc06g0160651 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.3e-121
Identity = 223/254 (87.80%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 33  RISQARVREGEGIQFFQMATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRD 92
           R  ++  R G G   FQMATLSIP SQNGFSR FFS K P I+ PF HSL RI+CSA RD
Sbjct: 25  RTDKSAERAG-GNSSFQMATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRD 84

Query: 93  GAKPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIG 152
           GA+PRE+LSPC HI +VACGLLAVWALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIG
Sbjct: 85  GAEPRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIG 144

Query: 153 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 212
           QANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK
Sbjct: 145 QANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 204

Query: 213 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 272
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN
Sbjct: 205 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 264

Query: 273 PTISPEGRAELGCR 287
           PTISPEGRAELGCR
Sbjct: 265 PTISPEGRAELGCR 277

[Close]

BLAST of Cmc06g0160651 vs. ExPASy TrEMBL
Match: A0A6J1E548 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430851 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 225/262 (85.88%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 25  IRCPNIFERISQARVREGEGIQFFQMATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPR 84
           IR     ER S+   R GE   FFQMATLSIP SQNGFSR FFS K P +  PF HSL  
Sbjct: 24  IRTDKSAERASE---RAGEN-SFFQMATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAP 83

Query: 85  ITCSATRDGAKPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCER 144
           I+CSA RDGA PRE+LSPC HI +VACGLLAVWALTNTSP  AANQRLPPLSTEPNRCER
Sbjct: 84  ISCSANRDGAVPRESLSPCNHIGSVACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCER 143

Query: 145 AFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKA 204
           AFVGNTIGQANGVYDKPIDLRFCDYTNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKA
Sbjct: 144 AFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKA 203

Query: 205 YAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYI 264
           YAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYI
Sbjct: 204 YAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYI 263

Query: 265 DLQKLCVNPTISPEGRAELGCR 287
           DLQKLCVNPTISPEGRAELGCR
Sbjct: 264 DLQKLCVNPTISPEGRAELGCR 281

[Close]

BLAST of Cmc06g0160651 vs. ExPASy TrEMBL
Match: A0A6J1CH87 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011411 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.5e-117
Identity = 212/237 (89.45%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 109
           MATLS P SQNGFSR F+S KR Q++ PFP SL R +C AT +GA+P+E+LSPC  I TV
Sbjct: 1   MATLSAPLSQNGFSRRFYSAKRRQLISPFPRSLARFSCCATGEGAQPKESLSPCNRIGTV 60

Query: 110 ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 169
           ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERA+VGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAYVGNTIGQANGVYDKPIDLRFCDY 120

Query: 170 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 229
           TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKG DFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGADFSNAVLDRVNFGKA 180

Query: 230 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI PEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIGPEGRAELGCR 237

[Close]

BLAST of Cmc06g0160651 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 301.6 bits (771), Expect = 6.7e-82
Identity = 153/240 (63.75%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSA---TRDGAKPRENLSPCKHI 109
           MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 110 STVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 169
            ++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 170 CDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 229
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 230 GKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           GK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

[Close]

BLAST of Cmc06g0160651 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-81
Identity = 152/239 (63.60%), Postives = 187/239 (78.24%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSA--TRDGAKPRENLSPCKHIS 109
           MA+L +  ++N  S  FFS      +   P SL  + CS     +G   +++L P K + 
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSGENRENGEGVKKSLFPLKELG 60

Query: 110 TVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 169
           ++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFC
Sbjct: 61  SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 120

Query: 170 DYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 229
           DYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFG
Sbjct: 121 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFG 180

Query: 230 KANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 287
           K+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 KSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 235

[Close]

BLAST of Cmc06g0160651 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 2.8e-80
Identity = 153/254 (60.24%), Postives = 188/254 (74.02%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSA-----------------TRD 109
           MA+L +  ++N  S  FFS      +   P SL  + CSA                   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 110 GAKPRENLSPCKHISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIG 169
           G   +++L P K + ++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 170 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 229
           QANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 230 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 287
           GV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N
Sbjct: 181 GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN 240

[Close]

BLAST of Cmc06g0160651 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12
Identity = 67/246 (27.24%), Postives = 109/246 (44.31%), Query Frame = 0


Query: 50  MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSA-----TRDGAKPRENLSPCK 109
           M +L I  S +  SRS +  +R        + L R+  S+      +D +  RE      
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQR--------YLLRRLQLSSRSNLEIKDSSNTREGCCSSA 70

Query: 110 HISTVACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDL 169
             +T    L A  A    + VIA++  +P ++ E NR E A      G  +       DL
Sbjct: 71  ESNTWKRILSAAMA----AAVIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADL 130

Query: 170 RFCDYTNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV 229
               ++NE    +  +  +A M ++ F G+  +   + KA A  A+F G D S+ ++DR+
Sbjct: 131 SKTVHSNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRM 190

Query: 230 NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEG 286
              +ANL  A+   +VL+ S    A+++ A F D +I  +  Q LC      NP    + 
Sbjct: 191 VLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDT 240

[Close]

BLAST of Cmc06g0160651 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 68.9 bits (167), Expect = 7.3e-12
Identity = 49/166 (29.52%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 125 VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 184
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 5   VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 64

Query: 185 LMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 244
            M ++ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 65  DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 124

Query: 245 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 286
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 125 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

The following BLAST results are available for this feature:

BLAST of Cmc06g0160651 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455988.1	1.5e-131	100.00	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]	[more]
XP_011651313.1	1.6e-125	95.78	thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 ...	[more]
XP_038885483.1	6.7e-124	94.51	thylakoid lumenal 17.4 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022984509.1	6.9e-121	87.80	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_022923067.1	3.4e-120	85.88	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Cmc06g0160651 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81760	9.5e-81	63.75	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q8H1Q1	2.1e-11	27.24	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	1.8e-07	30.25	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
P74221	1.4e-04	31.63	Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
Q8Z4G9	2.5e-04	35.71	Secreted effector protein PipB2 OS=Salmonella typhi OX=90370 GN=pipB2 PE=3 SV=1	[more]

BLAST of Cmc06g0160651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2V7	7.2e-132	100.00	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LC74	7.7e-126	95.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1	[more]
A0A6J1JAQ7	3.3e-121	87.80	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1E548	1.7e-120	85.88	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=...	[more]
A0A6J1CH87	6.5e-117	89.45	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673...	[more]

BLAST of Cmc06g0160651 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53490.1	6.7e-82	63.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.2	1.5e-81	63.60	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	2.8e-80	60.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	1.5e-12	27.24	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	7.3e-12	29.52	Pentapeptide repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF13599	Pentapeptide_4	coord: 209..267 e-value: 3.8E-8 score: 33.4
None	No IPR available	GENE3D	2.160.20.80		coord: 162..286 e-value: 1.2E-21 score: 78.2
None	No IPR available	PANTHER	PTHR47485:SF1	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 50..286
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 164..268
IPR044195	Pentapeptide repeat containing protein TL17-like	PANTHER	PTHR47485	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 50..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0160651.1	Cmc06g0160651.1	mRNA