Cmc06g0159341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0159341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr06: 7589143 .. 7590291 (+)
RNA-Seq Expression	Cmc06g0159341
Synteny	Cmc06g0159341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGCGGAAGTAGAAAAGGATGAGGAGCTGCAAGGCATAATTAACATCTTAAAGGAAAACCCAGAAGGAAAAGCAAACTACCAATGGGAATCGGGTAATTTACTCTACAAAGGAAGATTAGTTCTGTCAAAAAACTCCACTCTTATTCCATCACTGCTTCACACTTTCCATGACTCGGTGTTAGGGGGTCATTCGGGGTTTCTCAGAACTTATAAGAGGATGAACGGAGAGATACACTGGATGGGCATGAAAAATGACGTTAAGAAGTATGTAGAACAATGTGAAATCTGTCAAAGGAATAAAACGAAAGCACTAGCTCCGGCGGGACTACTGCAGCCATTACCATTACCCAATTTGATCCTTGAAGACTGGACTATGGACTTCATTGAGGGTTTACCTAAGGCTGGAGGATATGACAGTATCATGGTTGTAGTGGATCGATTGAAGATGGCCCATTTCATCACCTTGAAACACCCCTTTACGGCGAAACAAGTGGCAGAAAAATTCGTAGAGGAGATCATTAGTAAACATGGAATACCGAATTCAATCATAACTGATCGAGACAAGATTTTTTTAAGTCATTTTTGGAAAGAACTATTTACAGCCATGGGGACGTCGTTAAAAAGAAGTACGGCCTTCCACCCGCAAACCGACGGGCAAACGGAAAGGATAAATCGTTGCCTCGAAACCTACCTACGTTGTTTTTGTAACGAACAGCCCACAAAATGGCATAAGTGTATCCCTTGGGCAGAGTTGTGGTATAACACCACTTTCCATGCATCGGTGAAGACAATGCCATTTCAAGTAGTGTATGGCCGACCACCACCACCGCTGGTGCGCTACAAAGACAGGAAATCTAATAACAACAGTGTCGAACAGCTGCTGAAGGAAAGGGATTTAGTGATCAGCGCCTTGAAGGAGAATCTATTGATTGCGCAAAATAGAATGAAAAAACAGGCAGATTTACATCGTCGAGAACTGAAATTCCGGGTAGATGACGTTTATCTGAAGTTGCGCCCCTATAGACAGCGGTCATTAACACGGAAACGTTGTGAAAAATTAGCCCCAAAGTTCTACGGGCCGTACCGTATCATTGAGGAAATTGGAGAAGTAGCTTACCGTCTAAATCTTCCTCCGAGGCCATAA

mRNA sequence

ATGACAGCGGAAGTAGAAAAGGATGAGGAGCTGCAAGGCATAATTAACATCTTAAAGGAAAACCCAGAAGGAAAAGCAAACTACCAATGGGAATCGGGTAATTTACTCTACAAAGGAAGATTAGTTCTGTCAAAAAACTCCACTCTTATTCCATCACTGCTTCACACTTTCCATGACTCGGTGTTAGGGGGTCATTCGGGGTTTCTCAGAACTTATAAGAGGATGAACGGAGAGATACACTGGATGGGCATGAAAAATGACGTTAAGAAGTATGTAGAACAATGTGAAATCTGTCAAAGGAATAAAACGAAAGCACTAGCTCCGGCGGGACTACTGCAGCCATTACCATTACCCAATTTGATCCTTGAAGACTGGACTATGGACTTCATTGAGGGTTTACCTAAGGCTGGAGGATATGACAGTATCATGGTTGTAGTGGATCGATTGAAGATGGCCCATTTCATCACCTTGAAACACCCCTTTACGGCGAAACAAGTGGCAGAAAAATTCGTAGAGGAGATCATTAGTAAACATGGAATACCGAATTCAATCATAACTGATCGAGACAAGATTTTTTTAAGTCATTTTTGGAAAGAACTATTTACAGCCATGGGGACGTCGTTAAAAAGAAGTACGGCCTTCCACCCGCAAACCGACGGGCAAACGGAAAGGATAAATCGTTGCCTCGAAACCTACCTACGTTGTTTTTGTAACGAACAGCCCACAAAATGGCATAAGTGTATCCCTTGGGCAGAGTTGTGGTATAACACCACTTTCCATGCATCGGTGAAGACAATGCCATTTCAAGTAGTGTATGGCCGACCACCACCACCGCTGGTGCGCTACAAAGACAGGAAATCTAATAACAACAGTGTCGAACAGCTGCTGAAGGAAAGGGATTTAGTGATCAGCGCCTTGAAGGAGAATCTATTGATTGCGCAAAATAGAATGAAAAAACAGGCAGATTTACATCGTCGAGAACTGAAATTCCGGGTAGATGACGTTTATCTGAAGTTGCGCCCCTATAGACAGCGGTCATTAACACGGAAACGTTGTGAAAAATTAGCCCCAAAGTTCTACGGGCCGTACCGTATCATTGAGGAAATTGGAGAAGTAGCTTACCGTCTAAATCTTCCTCCGAGGCCATAA

Coding sequence (CDS)

ATGACAGCGGAAGTAGAAAAGGATGAGGAGCTGCAAGGCATAATTAACATCTTAAAGGAAAACCCAGAAGGAAAAGCAAACTACCAATGGGAATCGGGTAATTTACTCTACAAAGGAAGATTAGTTCTGTCAAAAAACTCCACTCTTATTCCATCACTGCTTCACACTTTCCATGACTCGGTGTTAGGGGGTCATTCGGGGTTTCTCAGAACTTATAAGAGGATGAACGGAGAGATACACTGGATGGGCATGAAAAATGACGTTAAGAAGTATGTAGAACAATGTGAAATCTGTCAAAGGAATAAAACGAAAGCACTAGCTCCGGCGGGACTACTGCAGCCATTACCATTACCCAATTTGATCCTTGAAGACTGGACTATGGACTTCATTGAGGGTTTACCTAAGGCTGGAGGATATGACAGTATCATGGTTGTAGTGGATCGATTGAAGATGGCCCATTTCATCACCTTGAAACACCCCTTTACGGCGAAACAAGTGGCAGAAAAATTCGTAGAGGAGATCATTAGTAAACATGGAATACCGAATTCAATCATAACTGATCGAGACAAGATTTTTTTAAGTCATTTTTGGAAAGAACTATTTACAGCCATGGGGACGTCGTTAAAAAGAAGTACGGCCTTCCACCCGCAAACCGACGGGCAAACGGAAAGGATAAATCGTTGCCTCGAAACCTACCTACGTTGTTTTTGTAACGAACAGCCCACAAAATGGCATAAGTGTATCCCTTGGGCAGAGTTGTGGTATAACACCACTTTCCATGCATCGGTGAAGACAATGCCATTTCAAGTAGTGTATGGCCGACCACCACCACCGCTGGTGCGCTACAAAGACAGGAAATCTAATAACAACAGTGTCGAACAGCTGCTGAAGGAAAGGGATTTAGTGATCAGCGCCTTGAAGGAGAATCTATTGATTGCGCAAAATAGAATGAAAAAACAGGCAGATTTACATCGTCGAGAACTGAAATTCCGGGTAGATGACGTTTATCTGAAGTTGCGCCCCTATAGACAGCGGTCATTAACACGGAAACGTTGTGAAAAATTAGCCCCAAAGTTCTACGGGCCGTACCGTATCATTGAGGAAATTGGAGAAGTAGCTTACCGTCTAAATCTTCCTCCGAGGCCATAA

Protein sequence

MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERDLVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPRP

Homology

[Close]

BLAST of Cmc06g0159341 vs. NCBI nr
Match: KAA0033720.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 790.0 bits (2039), Expect = 8.9e-225
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
           MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS
Sbjct: 1   MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60

Query: 61  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
           VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL
Sbjct: 61  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120

Query: 121 ILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGI 180
           ILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGI
Sbjct: 121 ILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGI 180

Query: 181 PNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQ 240
           PNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQ
Sbjct: 181 PNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQ 240

Query: 241 PTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD 300
           PTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD
Sbjct: 241 PTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD 300

Query: 301 LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFY 360
           LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFY
Sbjct: 301 LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFY 360

Query: 361 GPYRIIEEIGEVAYRLNLPPRP 383
           GPYRIIEEIGEVAYRLNLPPRP
Sbjct: 361 GPYRIIEEIGEVAYRLNLPPRP 382

[Close]

BLAST of Cmc06g0159341 vs. NCBI nr
Match: KAA0066550.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 731.5 bits (1887), Expect = 3.8e-207
Identity = 351/382 (91.88%), Postives = 368/382 (96.34%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
            +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 890  VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 949

Query: 61   VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
            VLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 950  VLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 1009

Query: 121  ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
            ILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 1010 ILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 1069

Query: 181  IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
            I NSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 1070 ISNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 1129

Query: 241  QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
            QPTKWHKCIPWAELWYNTTFHAS KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 1130 QPTKWHKCIPWAELWYNTTFHASAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 1189

Query: 301  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
            DLVISALKENL++AQNRMKKQADLHR+ELKF+V D+VYLKLRPYRQRSL RKRCEKLAPK
Sbjct: 1190 DLVISALKENLMMAQNRMKKQADLHRKELKFKVGDEVYLKLRPYRQRSLARKRCEKLAPK 1249

Query: 361  FYGPYRIIEEIGEVAYRLNLPP 381
            FYGPYRI+EEIGEVAYRLNLPP
Sbjct: 1250 FYGPYRIVEEIGEVAYRLNLPP 1271

[Close]

BLAST of Cmc06g0159341 vs. NCBI nr
Match: TYJ98047.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 728.0 bits (1878), Expect = 4.2e-206
Identity = 349/382 (91.36%), Postives = 367/382 (96.07%), Query Frame = 0


Query: 1   MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
           +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 213 VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 272

Query: 61  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
           VLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 273 VLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 332

Query: 121 ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
           ILEDWTMDFI+GLPKAGGYD+IMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 333 ILEDWTMDFIDGLPKAGGYDNIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 392

Query: 181 IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
           I NSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 393 ISNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 452

Query: 241 QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
           QPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 453 QPTKWHKCIPWAELWYNTTFHALAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 512

Query: 301 DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
           DLVISALKENL++AQNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCEKLAPK
Sbjct: 513 DLVISALKENLMMAQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCEKLAPK 572

Query: 361 FYGPYRIIEEIGEVAYRLNLPP 381
           FYGPYRI+EEIGEVAYRLNLPP
Sbjct: 573 FYGPYRIVEEIGEVAYRLNLPP 594

[Close]

BLAST of Cmc06g0159341 vs. NCBI nr
Match: TYK05651.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 726.9 bits (1875), Expect = 9.3e-206
Identity = 349/382 (91.36%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
            +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 852  VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 911

Query: 61   VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
            VLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 912  VLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 971

Query: 121  ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
            ILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 972  ILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 1031

Query: 181  IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
            IPNSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 1032 IPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 1091

Query: 241  QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
            QPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 1092 QPTKWHKCIPWAELWYNTTFHALAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 1151

Query: 301  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
            DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPK
Sbjct: 1152 DLVISALKENLIMTQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCENLAPK 1211

Query: 361  FYGPYRIIEEIGEVAYRLNLPP 381
            FYG YRI+EEIGEVAYRLNLPP
Sbjct: 1212 FYGAYRIVEEIGEVAYRLNLPP 1233

[Close]

BLAST of Cmc06g0159341 vs. NCBI nr
Match: KAA0040609.1 (DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa])

HSP 1 Score: 725.7 bits (1872), Expect = 2.1e-205
Identity = 349/382 (91.36%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
            +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 852  VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 911

Query: 61   VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
            VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 912  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 971

Query: 121  ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
            ILEDWTMDFIEGLPKAGG DSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 972  ILEDWTMDFIEGLPKAGGCDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 1031

Query: 181  IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
            IPNSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 1032 IPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 1091

Query: 241  QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
            QPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 1092 QPTKWHKCIPWAELWYNTTFHALAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 1151

Query: 301  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
            DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPK
Sbjct: 1152 DLVISALKENLIMTQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCENLAPK 1211

Query: 361  FYGPYRIIEEIGEVAYRLNLPP 381
            FYG YRI+EEIGEVAYRLNLPP
Sbjct: 1212 FYGAYRIVEEIGEVAYRLNLPP 1233

[Close]

BLAST of Cmc06g0159341 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 119/386 (30.83%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHD 60
            +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+
Sbjct: 864  VVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 923

Query: 61   SVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPN 120
                 H G       +     W G++  +++YV+ C  CQ NK++   P G LQP+P   
Sbjct: 924  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 983

Query: 121  LILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKH 180
               E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  
Sbjct: 984  RPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1043

Query: 181  GIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCN 240
            G P  II D D IF S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+
Sbjct: 1044 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1103

Query: 241  EQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ 300
              P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Sbjct: 1104 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS---- 1163

Query: 301  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCE 360
              +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  
Sbjct: 1164 --QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVM---VKRTKTGFLHKSN 1223

Query: 361  KLAPKFYGPYRIIEEIGEVAYRLNLP 380
            KLAP F GP+ ++++ G   Y L+LP
Sbjct: 1224 KLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Cmc06g0159341 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 119/386 (30.83%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHD 60
            +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+
Sbjct: 864  VVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 923

Query: 61   SVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPN 120
                 H G       +     W G++  +++YV+ C  CQ NK++   P G LQP+P   
Sbjct: 924  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 983

Query: 121  LILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKH 180
               E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  
Sbjct: 984  RPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1043

Query: 181  GIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCN 240
            G P  II D D IF S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+
Sbjct: 1044 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1103

Query: 241  EQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ 300
              P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Sbjct: 1104 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS---- 1163

Query: 301  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCE 360
              +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  
Sbjct: 1164 --QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVM---VKRTKTGFLHKSN 1223

Query: 361  KLAPKFYGPYRIIEEIGEVAYRLNLP 380
            KLAP F GP+ ++++ G   Y L+LP
Sbjct: 1224 KLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Cmc06g0159341 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 119/386 (30.83%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHD 60
            +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+
Sbjct: 864  VVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 923

Query: 61   SVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPN 120
                 H G       +     W G++  +++YV+ C  CQ NK++   P G LQP+P   
Sbjct: 924  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 983

Query: 121  LILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKH 180
               E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  
Sbjct: 984  RPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1043

Query: 181  GIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCN 240
            G P  II D D IF S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+
Sbjct: 1044 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1103

Query: 241  EQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ 300
              P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Sbjct: 1104 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS---- 1163

Query: 301  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCE 360
              +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  
Sbjct: 1164 --QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVM---VKRTKTGFLHKSN 1223

Query: 361  KLAPKFYGPYRIIEEIGEVAYRLNLP 380
            KLAP F GP+ ++++ G   Y L+LP
Sbjct: 1224 KLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Cmc06g0159341 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 119/386 (30.83%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHD 60
            +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+
Sbjct: 864  VVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 923

Query: 61   SVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPN 120
                 H G       +     W G++  +++YV+ C  CQ NK++   P G LQP+P   
Sbjct: 924  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 983

Query: 121  LILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKH 180
               E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  
Sbjct: 984  RPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1043

Query: 181  GIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCN 240
            G P  II D D IF S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+
Sbjct: 1044 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1103

Query: 241  EQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ 300
              P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Sbjct: 1104 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS---- 1163

Query: 301  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCE 360
              +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  
Sbjct: 1164 --QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVM---VKRTKTGFLHKSN 1223

Query: 361  KLAPKFYGPYRIIEEIGEVAYRLNLP 380
            KLAP F GP+ ++++ G   Y L+LP
Sbjct: 1224 KLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Cmc06g0159341 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-47
Identity = 119/386 (30.83%), Postives = 194/386 (50.26%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLL-YKGRLVLSKNSTLIPSLLHTFHD 60
            +  E   D +L  ++N   E+   + N Q + G L+  K +++L  ++ L  +++  +H+
Sbjct: 864  VVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 923

Query: 61   SVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPN 120
                 H G       +     W G++  +++YV+ C  CQ NK++   P G LQP+P   
Sbjct: 924  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 983

Query: 121  LILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKH 180
               E  +MDFI  LP++ GY+++ VVVDR  KMA  +      TA+Q A  F + +I+  
Sbjct: 984  RPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYF 1043

Query: 181  GIPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCN 240
            G P  II D D IF S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+
Sbjct: 1044 GNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCS 1103

Query: 241  EQPTKWHKCIPWAELWYNTTFHASVKTMPFQVVY----GRPPPPLVRYKDRKSNNNSVEQ 300
              P  W   I   +  YN   H++ +  PF++V+       P  L  + D+   N+    
Sbjct: 1104 THPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS---- 1163

Query: 301  LLKERDLVISALKENLLIAQNRMKKQADLHRREL-KFRVDDVYLKLRPYRQRSLTRKRCE 360
              +E   V   +KE+L     +MKK  D+  +E+ +F+  D+ +     R ++    +  
Sbjct: 1164 --QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVM---VKRTKTGFLHKSN 1223

Query: 361  KLAPKFYGPYRIIEEIGEVAYRLNLP 380
            KLAP F GP+ ++++ G   Y L+LP
Sbjct: 1224 KLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL
Match: A0A5A7SS14 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001940 PE=4 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 4.3e-225
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
           MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS
Sbjct: 1   MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60

Query: 61  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
           VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL
Sbjct: 61  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120

Query: 121 ILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGI 180
           ILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGI
Sbjct: 121 ILEDWTMDFIEGLPKAGGYDSIMVVVDRLKMAHFITLKHPFTAKQVAEKFVEEIISKHGI 180

Query: 181 PNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQ 240
           PNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQ
Sbjct: 181 PNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNEQ 240

Query: 241 PTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD 300
           PTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD
Sbjct: 241 PTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKERD 300

Query: 301 LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFY 360
           LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFY
Sbjct: 301 LVISALKENLLIAQNRMKKQADLHRRELKFRVDDVYLKLRPYRQRSLTRKRCEKLAPKFY 360

Query: 361 GPYRIIEEIGEVAYRLNLPPRP 383
           GPYRIIEEIGEVAYRLNLPPRP
Sbjct: 361 GPYRIIEEIGEVAYRLNLPPRP 382

[Close]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL
Match: A0A5A7VHA7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001140 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 1.8e-207
Identity = 351/382 (91.88%), Postives = 368/382 (96.34%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
            +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 890  VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 949

Query: 61   VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
            VLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 950  VLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 1009

Query: 121  ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
            ILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 1010 ILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 1069

Query: 181  IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
            I NSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 1070 ISNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 1129

Query: 241  QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
            QPTKWHKCIPWAELWYNTTFHAS KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 1130 QPTKWHKCIPWAELWYNTTFHASAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 1189

Query: 301  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
            DLVISALKENL++AQNRMKKQADLHR+ELKF+V D+VYLKLRPYRQRSL RKRCEKLAPK
Sbjct: 1190 DLVISALKENLMMAQNRMKKQADLHRKELKFKVGDEVYLKLRPYRQRSLARKRCEKLAPK 1249

Query: 361  FYGPYRIIEEIGEVAYRLNLPP 381
            FYGPYRI+EEIGEVAYRLNLPP
Sbjct: 1250 FYGPYRIVEEIGEVAYRLNLPP 1271

[Close]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL
Match: A0A5D3BFZ9 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold401G00130 PE=4 SV=1)

HSP 1 Score: 728.0 bits (1878), Expect = 2.0e-206
Identity = 349/382 (91.36%), Postives = 367/382 (96.07%), Query Frame = 0


Query: 1   MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
           +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 213 VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 272

Query: 61  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
           VLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 273 VLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 332

Query: 121 ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
           ILEDWTMDFI+GLPKAGGYD+IMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 333 ILEDWTMDFIDGLPKAGGYDNIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 392

Query: 181 IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
           I NSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 393 ISNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 452

Query: 241 QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
           QPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 453 QPTKWHKCIPWAELWYNTTFHALAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 512

Query: 301 DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
           DLVISALKENL++AQNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCEKLAPK
Sbjct: 513 DLVISALKENLMMAQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCEKLAPK 572

Query: 361 FYGPYRIIEEIGEVAYRLNLPP 381
           FYGPYRI+EEIGEVAYRLNLPP
Sbjct: 573 FYGPYRIVEEIGEVAYRLNLPP 594

[Close]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL
Match: A0A5D3C142 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001130 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.5e-206
Identity = 349/382 (91.36%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
            +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 852  VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 911

Query: 61   VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
            VLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 912  VLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 971

Query: 121  ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
            ILEDWTMDFIEGLPKAGGYDSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 972  ILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 1031

Query: 181  IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
            IPNSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 1032 IPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 1091

Query: 241  QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
            QPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 1092 QPTKWHKCIPWAELWYNTTFHALAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 1151

Query: 301  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
            DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPK
Sbjct: 1152 DLVISALKENLIMTQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCENLAPK 1211

Query: 361  FYGPYRIIEEIGEVAYRLNLPP 381
            FYG YRI+EEIGEVAYRLNLPP
Sbjct: 1212 FYGAYRIVEEIGEVAYRLNLPP 1233

[Close]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL
Match: A0A5A7TH70 (DNA polymerase epsilon catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001860 PE=3 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 1.0e-205
Identity = 349/382 (91.36%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 1    MTAEVEKDEELQGIINILKENPEGKANYQWESGNLLYKGRLVLSKNSTLIPSLLHTFHDS 60
            +T EVEKDEELQGII ILKE+PEGKANYQW++GNL YKGRLVLS+ STLIPSLLHTFHDS
Sbjct: 852  VTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDS 911

Query: 61   VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTKALAPAGLLQPLPLPNL 120
            VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNKT+ALAPAGLLQPLPLPNL
Sbjct: 912  VLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNKTEALAPAGLLQPLPLPNL 971

Query: 121  ILEDWTMDFIEGLPKAGGYDSIMVVVDRL-KMAHFITLKHPFTAKQVAEKFVEEIISKHG 180
            ILEDWTMDFIEGLPKAGG DSIMVVVDRL KMAHFI LKHPF+AKQVAEKFVEEIISKHG
Sbjct: 972  ILEDWTMDFIEGLPKAGGCDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHG 1031

Query: 181  IPNSIITDRDKIFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERINRCLETYLRCFCNE 240
            IPNSI+TDRDK+FLSHFWKELFTAMGTSLKRSTAFHPQTDGQTER+NRCLETYLRCFCNE
Sbjct: 1032 IPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNE 1091

Query: 241  QPTKWHKCIPWAELWYNTTFHASVKTMPFQVVYGRPPPPLVRYKDRKSNNNSVEQLLKER 300
            QPTKWHKCIPWAELWYNTTFHA  KT PFQVVYGRPPPPLVRY D KSNNNSVEQLLKER
Sbjct: 1092 QPTKWHKCIPWAELWYNTTFHALAKTTPFQVVYGRPPPPLVRYGDIKSNNNSVEQLLKER 1151

Query: 301  DLVISALKENLLIAQNRMKKQADLHRRELKFRV-DDVYLKLRPYRQRSLTRKRCEKLAPK 360
            DLVISALKENL++ QNRMKKQADLHRRELKF+V D+VYLKLRPYRQRSL RKRCE LAPK
Sbjct: 1152 DLVISALKENLIMTQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCENLAPK 1211

Query: 361  FYGPYRIIEEIGEVAYRLNLPP 381
            FYG YRI+EEIGEVAYRLNLPP
Sbjct: 1212 FYGAYRIVEEIGEVAYRLNLPP 1233

The following BLAST results are available for this feature:

BLAST of Cmc06g0159341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033720.1	8.9e-225	100.00	Retrotransposable element Tf2 [Cucumis melo var. makuwa]	[more]
KAA0066550.1	3.8e-207	91.88	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ98047.1	4.2e-206	91.36	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]	[more]
TYK05651.1	9.3e-206	91.36	Retrotransposable element Tf2 [Cucumis melo var. makuwa]	[more]
KAA0040609.1	2.1e-205	91.36	DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0159341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.4e-47	30.83	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.4e-47	30.83	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.4e-47	30.83	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.4e-47	30.83	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.4e-47	30.83	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SS14	4.3e-225	100.00	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7VHA7	1.8e-207	91.88	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BFZ9	2.0e-206	91.36	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3C142	4.5e-206	91.36	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TH70	1.0e-205	91.36	DNA polymerase epsilon catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Cmc06g0159341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 15..102 e-value: 4.1E-16 score: 61.0
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 54..278
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 116..309 e-value: 9.5E-47 score: 160.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 47..103 e-value: 1.4E-17 score: 63.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 112..275 score: 21.293909
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 115..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0159341.1	Cmc06g0159341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0008622	epsilon DNA polymerase complex
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding