Cmc06g0149421 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0149421
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	rRNA adenine N(6)-methyltransferase
Location	CMiso1.1chr06: 1337883 .. 1343080 (+)
RNA-Seq Expression	Cmc06g0149421
Synteny	Cmc06g0149421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTTGCTCAATTCGGAGATAGTTTTATCCAAGTTGGTTTCGGATTGGGAGTTGAGGAGAGCGAGAAAATGGCGGCACCTCCACTTCCAAATCCTTTCCTCCCGCCATTTTCATTCACGAGCTATAGACAGAGCCCTAATTTATATTTTCCAGCTAGTACTGCCATCGCCGGCTCACGGTGGGCTACTCCGTTTGTATCTTGTTCTGCTACTACCGTCAGAGTTGGAGAAGGAGTCAATCCAGATGATTATCATTCAACTTTAAGAGCTCTCAATTCCAAAGGCCGCGTGCCCAGAAAATCTCTCGGCCAGGTTCGTTCCCCAACACCCTGTTTACATGATTATCTTCTAGTTGTTTAAGTAATGCACGATGCTAGCGTTTGAAACACGGGGAAAGTTTGGGGAAATTGGGAAGTGTTAATGATAATCAGTAATTTCCGTTTTGTAAATTCTAATATGATACATGGAGAGGTAGAGAGAGATGATATATACAATATATTCTTCGATTATATGTTGGAAAACAGGAGGTGGTATTTCATCTGGATAGCACTTGAGATTTGAGAATACACCACGTATCTGGATAGTTTTGGGGAGATTTATTCAATGTGTATTGATGTTTTTGTTCACGTAAATCATTAGGAAATGATTATTTTGATACCGGGTATTGAGGTTTATCTCTTGCATTATGGTCAGCTCACAGCCCATCTCACTAATGCCCATAGAAGCTTCGCCTACCCAAAACTAGGGAGAAAATGAAGCTTTAAGTTAAGTTTTGAATATGGGGATTGAACATAGGACATTGGAGGCTATTATTAGGATTTAATTCAGTTAACTGCAAGTTTGATTTGATGATGATTCCTTCTCAAAGATGAGTATCGGTTGATTTGTTGGCATCTTATATGTTTGCAGCATTATATGTTGAACTCTTCAATTAACGAGCAGTTGGCTGCTGCAGCTAATGTTAAAGAGGGTGACGTAGTATTGGAAATTGGGCCTGGAACTGGGTCGTTAACCAATGTCCTTATTAACTCAGGTGCAACGGTGCTTGCAGTTGAGAAGGTTAGTTTTCTCTCTCTCATGAACGATTTCTGTCAGATATCAATTCTTGGATCCAGATGGGAAAATGCGTGTTGAATTTACTAGGCAAATAATGCTCCTTCTAACCTATAAGTTGTTTTCTTGTCTACAAGAATTCTAATCTAGGAATGTTTGGATCTTTGTTCAAAGGTTACATTGATTGTTTGACCTGTCAAGTCTTTAAAGGATCCTTTACTCAATGAAAATAAGAACTTGAAATTTTTGTTCTCAGATGCAAGTTTATCTTTTACTTTGACTATGCACTCTGACATCTCATATCTTTCTTCTTTTGGATATACTTTTCAAGTATAGGACTCATATATGGCTGCTCTTGTAGATGAAAGATTTGCTAACACAAACAGATTGAAGGTAAGTTATATCTGACGTCATCAGTATTATTATCATTTTCCCCTTTCGTGATAATTTAGTAGGATTGCTGATCAAATGTCTTTGAGGACTAAAATATCTTAATTCTTAATTAAGAAGATCATTCCTATAAGTTGGTATTTCATTTTCTTCTTGTTAAGTTTTCTCACAATTAAGTCCATCAAGAAAGCTACTGGTGTGATGGGCCATGTAACTAGCCAATCTTTTATGCAACACTTGACGTTGCATCATTGAATATTCCCCATACACCAAGCGGCTTAAGATTCATTTTTCATATCATTAGGAAATGTTTCTTCAGAAAAAAAAAAATTATCACTAAAAAATGCTTCTTGTGGGATTACTTAGCAGACATTAATAAGATTGGTGGTGCCAGGAATACTATATTTGCCATGTTTAAGATTTGCGGTGTTAATAAGTTTCGTAATCTATGTTTATTATGAGCTTTTTTTATAAAGTTTCTTGAGCATAGGTAAATATAAAATTTGCCATGTTTAATCTTACAGTCTAGACAATGTTGTACTATTCCAACTGGAACATGCAGGTTCTGAATGAGGACTTTGTTAAATGCCACGTGAGCTCACATATGATGTCTTTTCTCAAAAGTATTGAGTTGTCTGAAGCAAGATCACAACCTGCTAAAGTGAGTACATCTACTAGATATGCTTGTTCACTTGTCACATTTGCTTGTATTGTGTCAGATATACCCAGTACAGCAACCATTTTCTGTTGCTGTTGGTGTTTTTCTTCCTTATTTTTTTATGCAGCGGTTCTCAAGTTCTTGCATTTTCTTAGATAATTTTGAGAACCAGTGCTTATGCAAGCTCGATATCTTTCAATGATTGCATGAAGTTTTTGTTTAGATCATACAGTATTTGTCATGTTTGTATACATTGTTTGGGAAACTCAAGTATGTTTTAAGTTTATTCTTCAAAAGTGTATCTTTTTTAAGTGAACTATTTTATTCTAAGTTAGCTTAACTGAATTTCTTGTCGGCAGGTAGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATATTTTCAGAAGTTGTTCTTTTACTCCAGGTATATTCGATCGGCTCTAACCACTACATTATCTAGCTATTTCTTACCTCTCGAGAACAAGTTCGATTAGAACTTTCTTGTTTGTGGTTAATTTTGTAATCTATTTTCGTCATACAAAGAAAGAAAGAGAGAAAAGAAGAAAAGAAGAAAAGAAGAAAACAAAAGGGAGAGAGAGAGAGAGAGAAGAAAAGAGAAAAAAAAAACAAATCTTCAAACTTTCAAGTTCCATTTTAGCTACGATATTGTCAATGTCTTTTCTATTGTGAAACTGATCTGTATTTAAACTAATCAGGAGGAGGCTGCTCTACGCCTGGTGGAAACATCTCTGAGGAGATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGGTACCCTACTAGTTGTACTCTTTCCATACTATTCACAATTTTGTGTATCTTATCCAGACATGCTTCAAAATTTATGAATGCATTGAGATCTCTATCTCCTAAAAGGAACTGATTTAATGATCGGTTACTTCATTCAAATTACCAAACCTTAACAACCTATCTGAGCATTATCTTTCTGAAGTTGAAAATTATTTCACTCTTGTTACTTTTTTGTCAGTTCTTAATGATTAACGTATACAAAATCTTAAACAAATAATTCAGATCTAACTAATGGAAACTGTGGTCTAATTATTTCGAATTTGTTTAAGCAGAGCTAAACTATATTATACTTTGATGAAAAATAAAATAAGTTGCCCTAAGTGCATGGATAAACATATAACCAACTCCATGTATAACTTTAATACTTGCAACTTTTCTATGAAGTTATATATAAAATTTATCTTCCATTTCCTTTGTAGACCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTTTCCTCAGCCTAATGTAAGTGATCTTTAATTTGTAAGTATTCTAATTGCTTCTCTTCCTTTTCCTAGAACTAGAAGTATCCGTCTAATAATCACCAAAGTCTTTAACATATTTAAGAGCCTCTTCTCCCTACATTTTTCGGCCACCTGAATGAGAATAATAAGAAAGAGAAATGATAATGAAACTCCGATTTAGAGAACATTTGGACATATGGAATTACTTCCAATCTATCCGAAACTTTATTCTTCACTCACACACAGAATTTGAAAACTAATTTTTTCTTTTGTTTACGATTTTGTAGGTTGATGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCAGCAGACTGTCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTATATATTTTGCTCTGAAGTCATACATTTTCTTTCACTATTGTGAAAATTTTGGCTCGACCAAAGTATCATTTGCCTCTATCACTGCATTTGCATAGAAGAGTGCCTAGAGCACGTGTTTCTATAGTATAATATGACTATATAAACTTCACGTTTTCAAATTTTACACATTTAAACTTATATTGGTGAACTATTAAATTCGCTACTGCATCTTAATTTCTTCCTTGACGTATTTATTACTATCTTTTGACATGCCTTGGATTTTTAATGCATTACAGGTTAACTCAGCATTCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCTCAGAGATAGAAAAAGCTTTAGAAGATTCTAGCCTTCCCCCAACTGTAAGGCATATCTATCTCTACTCTGCCTATTTTTTGTTTCCTCAGAATCTGTTAATTGATTTCTTCATATTTGATTTGTTTGCAGTCAAGACCGGAGGAGCTAAGCTTAGACGATTTTGTTAGGTTGCACAATTTGATAGTGAAACAGTAGTTCCTGTGGCATTAACTTGAAAAAATGATCAATCCAAGTTCCTACAGGATGACTATTTCCTACTTTGGAAACCATCACTAGTTAAGAATCCAAGAAACGCTCAATTGGTGGCTCTGCGAAGAAGGTTGGAAGGAGGAGTATCAGTATAAGATATGCTCATTCACCGTTTTTAACCTAAACATAAAAGAAGAAAGGAAGGAGAGTGAAGGGGATGGAGTATGTGAAGTCAACTGAGAAGGAAAAGGAAGCGTCTACAACAGCTCTAAGAGAAGGATCACTCACTGGAAGCTACCGAAGCGAAAAAGCAGGTTCAATTCTTTTAATTTCTTGTTCTTTCCTTCTCTTAGTTGTTATTTATACGAGCGACTTGTTGTTACTGTTCATATTTAGCATGAAATGAACTCTTCTAGTTGTATTTGTATGTACTGAATTCTTGTATTGGAAAGGATAGAAGTCCGTGAGTTGAAATTTAAAATCATGCATTCCTTCATTTTGTTGGCCAAGTCCATTTACAGTCTTGTTCATCTTTGGGTCTTGAAACATGAGTACTTGATATGTGAAATATCGGGTACTCATTGAGAGGTCATTTTCAACTTCATGGGCCTTGGTGATTCAGATTGTTTTCCACTTTCTTACTGAACATGACCCCATTTTTAACTTGTAAGGTTTGAGAACTTGGGATTGTAATGAACGTATGAGCTGCTCCTTTGGATTGGAATGTTTAATGCTTTAACTAATGGTTGAAGATCTCTAAGAATGCTAGACTATTTATTTATTTGTATTTTTTTAGACACTGTACATGCTAAATTTAAGCAGTGGCAGATCCAAAAAAGTTTATGTTG

mRNA sequence

CTTTGTTGCTCAATTCGGAGATAGTTTTATCCAAGTTGGTTTCGGATTGGGAGTTGAGGAGAGCGAGAAAATGGCGGCACCTCCACTTCCAAATCCTTTCCTCCCGCCATTTTCATTCACGAGCTATAGACAGAGCCCTAATTTATATTTTCCAGCTAGTACTGCCATCGCCGGCTCACGGTGGGCTACTCCGTTTGTATCTTGTTCTGCTACTACCGTCAGAGTTGGAGAAGGAGTCAATCCAGATGATTATCATTCAACTTTAAGAGCTCTCAATTCCAAAGGCCGCGTGCCCAGAAAATCTCTCGGCCAGTTGGCTGCTGCAGCTAATGTTAAAGAGGGTGACGTAGTATTGGAAATTGGGCCTGGAACTGGGTCGTTAACCAATGTCCTTATTAACTCAGGTGCAACGGTGCTTGCAGTTGAGAAGGACTCATATATGGCTGCTCTTGTAGATGAAAGATTTGCTAACACAAACAGATTGAAGGTTCTGAATGAGGACTTTGTTAAATGCCACGTGAGCTCACATATGATGTCTTTTCTCAAAAGTATTGAGTTGTCTGAAGCAAGATCACAACCTGCTAAAGTAGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATATTTTCAGAAGTTGTTCTTTTACTCCAGGAGGAGGCTGCTCTACGCCTGGTGGAAACATCTCTGAGGAGATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGACCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTTTCCTCAGCCTAATGTTGATGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCAGCAGACTGTCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTAACTCAGCATTCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCTCAGAGATAGAAAAAGCTTTAGAAGATTCTAGCCTTCCCCCAACTTCAAGACCGGAGGAGCTAAGCTTAGACGATTTTGTTAGGTTGCACAATTTGATAGTGAAACAGTAGTTCCTGTGGCATTAACTTGAAAAAATGATCAATCCAAGTTCCTACAGGATGACTATTTCCTACTTTGGAAACCATCACTAGTTAAGAATCCAAGAAACGCTCAATTGGTGGCTCTGCGAAGAAGGTTGGAAGGAGGAGTATCAGTATAAGATATGCTCATTCACCGTTTTTAACCTAAACATAAAAGAAGAAAGGAAGGAGAGTGAAGGGGATGGAGTATGTGAAGTCAACTGAGAAGGAAAAGGAAGCGTCTACAACAGCTCTAAGAGAAGGATCACTCACTGGAAGCTACCGAAGCGAAAAAGCAGGTTCAATTCTTTTAATTTCTTGTTCTTTCCTTCTCTTAGTTGTTATTTATACGAGCGACTTGTTGTTACTGTTCATATTTAGCATGAAATGAACTCTTCTAGTTGTATTTGTATGTACTGAATTCTTGTATTGGAAAGGATAGAAGTCCGTGAGTTGAAATTTAAAATCATGCATTCCTTCATTTTGTTGGCCAAGTCCATTTACAGTCTTGTTCATCTTTGGGTCTTGAAACATGAGTACTTGATATGTGAAATATCGGGTACTCATTGAGAGGTCATTTTCAACTTCATGGGCCTTGGTGATTCAGATTGTTTTCCACTTTCTTACTGAACATGACCCCATTTTTAACTTGTAAGGTTTGAGAACTTGGGATTGTAATGAACGTATGAGCTGCTCCTTTGGATTGGAATGTTTAATGCTTTAACTAATGGTTGAAGATCTCTAAGAATGCTAGACTATTTATTTATTTGTATTTTTTTAGACACTGTACATGCTAAATTTAAGCAGTGGCAGATCCAAAAAAGTTTATGTTG

Coding sequence (CDS)

ATGGCGGCACCTCCACTTCCAAATCCTTTCCTCCCGCCATTTTCATTCACGAGCTATAGACAGAGCCCTAATTTATATTTTCCAGCTAGTACTGCCATCGCCGGCTCACGGTGGGCTACTCCGTTTGTATCTTGTTCTGCTACTACCGTCAGAGTTGGAGAAGGAGTCAATCCAGATGATTATCATTCAACTTTAAGAGCTCTCAATTCCAAAGGCCGCGTGCCCAGAAAATCTCTCGGCCAGTTGGCTGCTGCAGCTAATGTTAAAGAGGGTGACGTAGTATTGGAAATTGGGCCTGGAACTGGGTCGTTAACCAATGTCCTTATTAACTCAGGTGCAACGGTGCTTGCAGTTGAGAAGGACTCATATATGGCTGCTCTTGTAGATGAAAGATTTGCTAACACAAACAGATTGAAGGTTCTGAATGAGGACTTTGTTAAATGCCACGTGAGCTCACATATGATGTCTTTTCTCAAAAGTATTGAGTTGTCTGAAGCAAGATCACAACCTGCTAAAGTAGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATATTTTCAGAAGTTGTTCTTTTACTCCAGGAGGAGGCTGCTCTACGCCTGGTGGAAACATCTCTGAGGAGATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGACCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTTTCCTCAGCCTAATGTTGATGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCAGCAGACTGTCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTAACTCAGCATTCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCTCAGAGATAGAAAAAGCTTTAGAAGATTCTAGCCTTCCCCCAACTTCAAGACCGGAGGAGCTAAGCTTAGACGATTTTGTTAGGTTGCACAATTTGATAGTGAAACAGTAG

Protein sequence

MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDDYHSTLRALNSKGRVPRKSLGQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ

Homology

[Close]

BLAST of Cmc06g0149421 vs. NCBI nr
Match: KAA0049001.1 (ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa] >TYK17563.1 ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 637.9 bits (1644), Expect = 5.0e-179
Identity = 335/347 (96.54%), Postives = 335/347 (96.54%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSA TVRVGEGVNPDD
Sbjct: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSAATVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGRVPRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ
Sbjct: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 347

[Close]

BLAST of Cmc06g0149421 vs. NCBI nr
Match: XP_008438106.1 (PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 2.5e-178
Identity = 334/347 (96.25%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWA PFVSCSA TVRVGEGVNPDD
Sbjct: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGRVPRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ
Sbjct: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 347

[Close]

BLAST of Cmc06g0149421 vs. NCBI nr
Match: XP_004133887.1 (ribosomal RNA small subunit methyltransferase, chloroplastic [Cucumis sativus] >KGN56557.1 hypothetical protein Csa_011250 [Cucumis sativus])

HSP 1 Score: 592.4 bits (1526), Expect = 2.4e-165
Identity = 314/346 (90.75%), Postives = 321/346 (92.77%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAA PLPNPFLPPFS TS  QSPN YFP ST++ GSRWATPFVSCSA +VRVGEGVNPDD
Sbjct: 1   MAASPLPNPFLPPFSPTSSTQSPNFYFPPSTSVVGSRWATPFVSCSAASVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHST+RALNSKGRVPRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTIRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMA LVDERFANTNRLKVLNEDFVKC+VSSHMMS LKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR SEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLK+AAD PAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 336
           LRKSLQHICTS EIEKALEDSSL PTSRPEELSLDDFV+LHNLIVK
Sbjct: 301 LRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVK 346

[Close]

BLAST of Cmc06g0149421 vs. NCBI nr
Match: XP_038878140.1 (ribosomal RNA small subunit methyltransferase, chloroplastic [Benincasa hispida])

HSP 1 Score: 575.5 bits (1482), Expect = 3.0e-160
Identity = 309/349 (88.54%), Postives = 320/349 (91.69%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPAS--TAIAGSRWATPFVSCSATTVRVGEGVNP 60
           MAAPPLPN FLPPFS TSYR SPN YF AS  TA AG+R ATPFV+CS+ T RVGEGVNP
Sbjct: 1   MAAPPLPNLFLPPFSPTSYRLSPNSYFSASTATATAGARRATPFVACSSATARVGEGVNP 60

Query: 61  DDYHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNV 120
           DDYHSTLRALNSKGR PRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNV
Sbjct: 61  DDYHSTLRALNSKGRTPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNV 120

Query: 121 LINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEAR 180
           LI++GATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMS LKSIELS++R
Sbjct: 121 LISAGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSR 180

Query: 181 SQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVF 240
           SQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR SEYRPINVF
Sbjct: 181 SQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVF 240

Query: 241 VNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKR 300
           VNFYS PELKFKVPRTNFFPQPNVDAAVVSFKLKQ+AD PAVSSTKSFFSMVNSAFNGKR
Sbjct: 241 VNFYSGPELKFKVPRTNFFPQPNVDAAVVSFKLKQSADYPAVSSTKSFFSMVNSAFNGKR 300

Query: 301 KMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           KMLRKSLQHICTS EIE+AL+DSSLP TSRPEELSLDDFVRLHNLIV+Q
Sbjct: 301 KMLRKSLQHICTSLEIERALKDSSLPATSRPEELSLDDFVRLHNLIVEQ 349

[Close]

BLAST of Cmc06g0149421 vs. NCBI nr
Match: XP_022147255.1 (ribosomal RNA small subunit methyltransferase, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 545.8 bits (1405), Expect = 2.6e-151
Identity = 289/347 (83.29%), Postives = 308/347 (88.76%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAP LPN FLPP S  S  QSP  YFP S+A AG+R  TPFV+CSA TVR G  VNPDD
Sbjct: 1   MAAPSLPNLFLPPISPVSSTQSPKFYFPVSSATAGARRETPFVACSAATVRSGGRVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGR+PRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTN+LI
Sbjct: 61  YHSTLRALNSKGRMPRKSLGQHYMLNSSINQQLAAAANVKEGDVVLEIGPGTGSLTNILI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKD YMAA+VDERFA+TNRLKVLNEDFVKCHVSSHMMS LK +ELS+++SQ
Sbjct: 121 NSGATVLAVEKDPYMAAVVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKGMELSDSKSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTD+IKQLLPMG+IFSEVVLLLQEE ALRLVE SLR SEYRPIN+FVN
Sbjct: 181 PAKVVSNIPFNISTDVIKQLLPMGEIFSEVVLLLQEETALRLVEASLRTSEYRPINIFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPE KFKVPRT+FFPQPNVDAAVVSFKLKQAAD PAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPEFKFKVPRTDFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHICTS EIE+ALE SSLP TSRPEELSL+DFV+LHNLIV+Q
Sbjct: 301 LRKSLQHICTSLEIERALEYSSLPATSRPEELSLEDFVKLHNLIVRQ 347

[Close]

BLAST of Cmc06g0149421 vs. ExPASy Swiss-Prot
Match: O65090 (Ribosomal RNA small subunit methyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PFC1 PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.9e-110
Identity = 216/333 (64.86%), Postives = 256/333 (76.88%), Query Frame = 0


Query: 15  SFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDDYHSTLRALNSKGRV 74
           S+T    SP+       + A SR  T  VSC  +        +PDDYHSTL++LNS+GR 
Sbjct: 19  SWTCGDNSPSKLLLGEISAALSRRRTVKVSCGKS--------SPDDYHSTLKSLNSRGRF 78

Query: 75  PRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSY 134
           PRKSLG           QLA+AA+VKEGD VLEIGPGTGSLTNVLIN GATVLA+EKD +
Sbjct: 79  PRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPH 138

Query: 135 MAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNIST 194
           M  LV ERFA +++ KVL EDFVKCH+ SHM+S L++  LS   S  AKVVSN+PFNIST
Sbjct: 139 MVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIST 198

Query: 195 DIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRT 254
           D++K LLPMGDIFS+VVLLLQ+EAALRLVE +LR SEYRPIN+ +NFYS+PE  F+VPR 
Sbjct: 199 DVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNFRVPRE 258

Query: 255 NFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEI 314
           NFFPQP VDAAVV+FKLK   D P VSSTK+FFS+VNSAFNGKRKMLRKSLQHI +S +I
Sbjct: 259 NFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSPDI 318

Query: 315 EKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           EKAL  + LP TSRPEEL+LDDFV+LHN+I ++
Sbjct: 319 EKALGVAGLPATSRPEELTLDDFVKLHNVIARE 343

[Close]

BLAST of Cmc06g0149421 vs. ExPASy Swiss-Prot
Match: Q6ME80 (Ribosomal RNA small subunit methyltransferase A OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=rsmA PE=3 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.6e-37
Identity = 97/275 (35.27%), Postives = 155/275 (56.36%), Query Frame = 0


Query: 68  LNSKGRVPRKSLGQ-----------LAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVL 127
           LN  G  P+K L Q           +  A++V+ G++VLEIGPG GSLT  ++   A V+
Sbjct: 13  LNQLGIFPKKGLSQNFLIDGNIIRKIVRASDVQPGNLVLEIGPGPGSLTQAMLEVEAHVV 72

Query: 128 AVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSN 187
           AVEKD  +A  +      + +L++  ED +   V   + S L+         Q AKV++N
Sbjct: 73  AVEKDFVLARELKRFQTPSKQLEIFCEDILMFSVEEELQSRLRD-------DQKAKVIAN 132

Query: 188 IPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPEL 247
           +P++++T I+ +++    +FS + +++QEE A R+      +S+Y    +F+NFYS P  
Sbjct: 133 LPYHLTTPILAEMVVRRKLFSSLTVMVQEEVARRMTALP-GQSDYSSFTIFLNFYSKPRY 192

Query: 248 KFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQH 307
            F V R  F+P P VD+A+V  +LK+    P     + FF +  +AF  +RKMLR SL+ 
Sbjct: 193 GFTVSRNCFYPAPKVDSAIVVLELKEP---PPNIDAQVFFKITRTAFEQRRKMLRASLKS 252

Query: 308 ICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHN 332
           +   S+I  ALE     P +RPE LSL+DF++L++
Sbjct: 253 LFDPSKISNALEIIGQNPQARPEVLSLEDFIKLYH 276

[Close]

BLAST of Cmc06g0149421 vs. ExPASy Swiss-Prot
Match: Q2RME8 (Ribosomal RNA small subunit methyltransferase A OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=rsmA PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 90/278 (32.37%), Postives = 144/278 (51.80%), Query Frame = 0


Query: 64  TLRALNSKGRVPRKSLGQ-----------LAAAANVKEGDVVLEIGPGTGSLTNVLINSG 123
           TL  +  KG VPRKS GQ           +A AA V  GD V+EIGPG G+LT  L    
Sbjct: 10  TLALVREKGLVPRKSRGQNFLVDANIVRKIARAAEVGPGDTVVEIGPGLGALTQELAARA 69

Query: 124 ATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAK 183
             V+A+E D  + A ++E  A  + ++++  D +K      +   L +    E R    K
Sbjct: 70  GLVIAIEIDRELFAALEETLAGRDNVRLVAGDALKVDFDRLVAGILGT---GEGRLPTYK 129

Query: 184 VVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYS 243
           VV+N+P+ I+T I+  LL      +E+VL++Q E   R++       +Y  ++V V +Y+
Sbjct: 130 VVANLPYYITTPILMHLLTSRFRIAELVLMVQAEVGYRMLARP-GGKDYGALSVVVQYYT 189

Query: 244 DPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRK 303
           +P +  KVPRT F+P+P VD+ V+    +       V     FF +V +AFN +RK +  
Sbjct: 190 EPAVVLKVPRTVFYPRPEVDSLVLKLTCR-TRPVVQVEDEDFFFRVVRAAFNQRRKTILN 249

Query: 304 SLQHI-CTSSEIEKALEDSSLPPTSRPEELSLDDFVRL 330
           +L  +    S+I +AL  + + P  R E L +++F  +
Sbjct: 250 ALGSLGFEKSKIMEALAGAGIDPRRRGETLGMEEFASI 282

[Close]

BLAST of Cmc06g0149421 vs. ExPASy Swiss-Prot
Match: Q8YS62 (Ribosomal RNA small subunit methyltransferase A OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rsmA PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 90/262 (34.35%), Postives = 145/262 (55.34%), Query Frame = 0


Query: 77  KSLGQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTN 136
           K+L  +  AA     D +LEIGPGTG LT  L+ +  +++AVE D  +  L+ ++     
Sbjct: 17  KALDAIVKAAECSTNDRILEIGPGTGILTRRLLPAVQSLVAVEIDRDLCELLAKQLGKKE 76

Query: 137 RLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNISTDIIKQLL-----P 196
              +L  DF+   +++++ SF K         +P KVV+NIP+NI+  II++LL     P
Sbjct: 77  NFLLLQGDFLTIDLAANLGSFPKF-------QKPNKVVANIPYNITGPIIEKLLGTISNP 136

Query: 197 MGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNV 256
             + F  +VLL+Q+E A RL   S  R+ +  ++V V + +D E    VP + F P P V
Sbjct: 137 NLEPFDSIVLLIQKEVAERLYAKSGSRT-FGALSVRVQYLADCEFICDVPASAFHPPPKV 196

Query: 257 DAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSS 316
           D+AVV  + +Q  + P V+  K   ++V   F  KRKMLR +LQ +     + + LE  +
Sbjct: 197 DSAVVRLRPRQ-IEIP-VNDPKRLENLVKLGFGAKRKMLRNNLQSVVDRDRLSQLLEQLN 256

Query: 317 LPPTSRPEELSLDDFVRLHNLI 334
           + P +R E++S   +V+L NL+
Sbjct: 257 INPQARAEDISTQQWVKLANLL 268

[Close]

BLAST of Cmc06g0149421 vs. ExPASy Swiss-Prot
Match: C1CMT3 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pneumoniae (strain P1031) OX=488223 GN=rsmA PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 91/293 (31.06%), Postives = 150/293 (51.19%), Query Frame = 0


Query: 60  DYHSTLRALNSKGRVPRKSLGQ-----------LAAAANVKEGDVVLEIGPGTGSLTNVL 119
           DY  T   L   G   +KS GQ           +   A + +   V+EIGPG G+LT  L
Sbjct: 5   DYSVTKAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGALTEFL 64

Query: 120 INSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARS 179
               A V+A E D  +  ++ +   + + + V+NED +K  ++ H+ +F K+ +L     
Sbjct: 65  AERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNF-KNPDL----- 124

Query: 180 QPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFV 239
            P KVV+N+P+ I+T I+  L+  G  FSE V+++Q+E A R +        Y  +++ V
Sbjct: 125 -PIKVVANLPYYITTPILMHLIESGIPFSEFVVMMQKEVADR-ISAQPNTKAYGSLSIAV 184

Query: 240 NFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRK 299
            +Y   ++ F VPRT F P PNVD+A++   +++     AV     FF +  ++F  +RK
Sbjct: 185 QYYMTAKVAFIVPRTVFVPAPNVDSAILKM-VRRPVPAVAVEDENFFFKVSKASFTHRRK 244

Query: 300 MLRKSLQHICTSSE-----IEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
            L  +L      +E     + KAL+ + L P+ R E LSL++F  L + +  Q
Sbjct: 245 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLEEFASLADALKGQ 288

[Close]

BLAST of Cmc06g0149421 vs. ExPASy TrEMBL
Match: A0A5A7U5Y1 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004330 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.4e-179
Identity = 335/347 (96.54%), Postives = 335/347 (96.54%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSA TVRVGEGVNPDD
Sbjct: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSAATVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGRVPRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ
Sbjct: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 347

[Close]

BLAST of Cmc06g0149421 vs. ExPASy TrEMBL
Match: A0A1S3AW66 (rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483311 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 334/347 (96.25%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWA PFVSCSA TVRVGEGVNPDD
Sbjct: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGRVPRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ
Sbjct: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 347

[Close]

BLAST of Cmc06g0149421 vs. ExPASy TrEMBL
Match: A0A0A0L7J6 (rRNA adenine N(6)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G124770 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.2e-165
Identity = 314/346 (90.75%), Postives = 321/346 (92.77%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAA PLPNPFLPPFS TS  QSPN YFP ST++ GSRWATPFVSCSA +VRVGEGVNPDD
Sbjct: 1   MAASPLPNPFLPPFSPTSSTQSPNFYFPPSTSVVGSRWATPFVSCSAASVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHST+RALNSKGRVPRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTIRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMA LVDERFANTNRLKVLNEDFVKC+VSSHMMS LKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR SEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLK+AAD PAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 336
           LRKSLQHICTS EIEKALEDSSL PTSRPEELSLDDFV+LHNLIVK
Sbjct: 301 LRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVK 346

[Close]

BLAST of Cmc06g0149421 vs. ExPASy TrEMBL
Match: A0A6J1CZM8 (rRNA adenine N(6)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111016252 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.2e-151
Identity = 289/347 (83.29%), Postives = 308/347 (88.76%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAP LPN FLPP S  S  QSP  YFP S+A AG+R  TPFV+CSA TVR G  VNPDD
Sbjct: 1   MAAPSLPNLFLPPISPVSSTQSPKFYFPVSSATAGARRETPFVACSAATVRSGGRVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGR+PRKSLG           QLAAAANVKEGDVVLEIGPGTGSLTN+LI
Sbjct: 61  YHSTLRALNSKGRMPRKSLGQHYMLNSSINQQLAAAANVKEGDVVLEIGPGTGSLTNILI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKD YMAA+VDERFA+TNRLKVLNEDFVKCHVSSHMMS LK +ELS+++SQ
Sbjct: 121 NSGATVLAVEKDPYMAAVVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKGMELSDSKSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTD+IKQLLPMG+IFSEVVLLLQEE ALRLVE SLR SEYRPIN+FVN
Sbjct: 181 PAKVVSNIPFNISTDVIKQLLPMGEIFSEVVLLLQEETALRLVEASLRTSEYRPINIFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPE KFKVPRT+FFPQPNVDAAVVSFKLKQAAD PAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPEFKFKVPRTDFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHICTS EIE+ALE SSLP TSRPEELSL+DFV+LHNLIV+Q
Sbjct: 301 LRKSLQHICTSLEIERALEYSSLPATSRPEELSLEDFVKLHNLIVRQ 347

[Close]

BLAST of Cmc06g0149421 vs. ExPASy TrEMBL
Match: A0A6J1FPR1 (rRNA adenine N(6)-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111447340 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.8e-148
Identity = 288/347 (83.00%), Postives = 303/347 (87.32%), Query Frame = 0


Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDD 60
           MAAPPLPNPFLPP S T   QSP   FPA+T   G+R ATPFV+CS+ TVR G  VNPDD
Sbjct: 1   MAAPPLPNPFLPPISPTFSPQSPKFCFPATTPTVGARRATPFVACSSATVRNGGRVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGR+PRKSLG           QLAAAANVKEGDVVLEIGPGTGSLT+VLI
Sbjct: 61  YHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTSVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           + GATVLAVEKDSYMAALVDERFA TNRLKVLNEDF KCHVSSHM S LKSIELS+++SQ
Sbjct: 121 DLGATVLAVEKDSYMAALVDERFAGTNRLKVLNEDFTKCHVSSHMSSLLKSIELSDSKSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEE ALRLV++S   SE RPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEETALRLVDSSSGTSEKRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPE KFKVPRTNFFPQPNVDAAVVSFKLKQAAD PAVSS KSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPEFKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSIKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           LRKSLQHI T+ EIE+ALED SLP TSRPEELSL+DFVRLHNLIVKQ
Sbjct: 301 LRKSLQHISTALEIERALEDCSLPTTSRPEELSLNDFVRLHNLIVKQ 347

[Close]

BLAST of Cmc06g0149421 vs. TAIR 10
Match: AT1G01860.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 399.4 bits (1025), Expect = 2.8e-111
Identity = 216/333 (64.86%), Postives = 256/333 (76.88%), Query Frame = 0


Query: 15  SFTSYRQSPNLYFPASTAIAGSRWATPFVSCSATTVRVGEGVNPDDYHSTLRALNSKGRV 74
           S+T    SP+       + A SR  T  VSC  +        +PDDYHSTL++LNS+GR 
Sbjct: 19  SWTCGDNSPSKLLLGEISAALSRRRTVKVSCGKS--------SPDDYHSTLKSLNSRGRF 78

Query: 75  PRKSLG-----------QLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSY 134
           PRKSLG           QLA+AA+VKEGD VLEIGPGTGSLTNVLIN GATVLA+EKD +
Sbjct: 79  PRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPH 138

Query: 135 MAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNIST 194
           M  LV ERFA +++ KVL EDFVKCH+ SHM+S L++  LS   S  AKVVSN+PFNIST
Sbjct: 139 MVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIST 198

Query: 195 DIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRT 254
           D++K LLPMGDIFS+VVLLLQ+EAALRLVE +LR SEYRPIN+ +NFYS+PE  F+VPR 
Sbjct: 199 DVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNFRVPRE 258

Query: 255 NFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEI 314
           NFFPQP VDAAVV+FKLK   D P VSSTK+FFS+VNSAFNGKRKMLRKSLQHI +S +I
Sbjct: 259 NFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSPDI 318

Query: 315 EKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 337
           EKAL  + LP TSRPEEL+LDDFV+LHN+I ++
Sbjct: 319 EKALGVAGLPATSRPEELTLDDFVKLHNVIARE 343

[Close]

BLAST of Cmc06g0149421 vs. TAIR 10
Match: AT2G47420.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-16
Identity = 77/251 (30.68%), Postives = 116/251 (46.22%), Query Frame = 0


Query: 61  YHSTLRALNSKGRVPRKS---LGQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLA 120
           Y   +    SKG+   K+   +  +   A +K  DV+LEIGPGTG+LT  L+ +G  V+A
Sbjct: 22  YQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKEVIA 81

Query: 121 VEKDSYMAALVDERFANT---NRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVV 180
           VE DS M   +  RF  T   NRLKV+  D +K  +    +                  V
Sbjct: 82  VELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRFDI-----------------CV 141

Query: 181 SNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDP 240
           +NIP+ IS+ +  +LL     F   V++ Q E A+RLV      + Y  ++V    Y+  
Sbjct: 142 ANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLV-AQPGDNLYCRLSVNTQLYARV 201

Query: 241 ELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSL 300
               KV + NF P P VD++VV  + ++    P V+  K +   +   F  K K L    
Sbjct: 202 SHLLKVGKNNFRPPPKVDSSVVRIEPRRPG--PQVNK-KEWDGFLRVCFIRKNKTLGSIF 251

Query: 301 QHICTSSEIEK 306
           +     S +EK
Sbjct: 262 KQKSVLSMLEK 251

[Close]

BLAST of Cmc06g0149421 vs. TAIR 10
Match: AT5G66360.2 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 79.7 bits (195), Expect = 4.9e-15
Identity = 64/235 (27.23%), Postives = 115/235 (48.94%), Query Frame = 0


Query: 62  HSTLRALNSKGR---VPRKSLGQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAV 121
           H  L    SKG+      + L  +  +++++  D VLEIGPGTG+LT  L+ +   V+AV
Sbjct: 58  HDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAV 117

Query: 122 EKDSYMAALVDERFAN---TNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVS 181
           E D  M  ++ +R ++    ++L ++ +D +K       +                 VV+
Sbjct: 118 ELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDL-----------------VVA 177

Query: 182 NIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPE 241
           NIP+NIS+ ++ +L+   + F    LLLQ+E + RL+  +   S++  + V V   +D +
Sbjct: 178 NIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLL-ANPGDSDFNRLAVNVKLVADVK 237

Query: 242 LKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKML 291
               V +  F P P VD++V+    K+    P V + + + +   + F  K K L
Sbjct: 238 FVMDVSKREFVPPPKVDSSVIRITPKEI--IPDV-NVQEWLAFTRTCFGKKNKTL 271

[Close]

BLAST of Cmc06g0149421 vs. TAIR 10
Match: AT5G66360.1 (Ribosomal RNA adenine dimethylase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-10
Identity = 46/157 (29.30%), Postives = 81/157 (51.59%), Query Frame = 0


Query: 62  HSTLRALNSKGR---VPRKSLGQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAV 121
           H  L    SKG+      + L  +  +++++  D VLEIGPGTG+LT  L+ +   V+AV
Sbjct: 58  HDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAV 117

Query: 122 EKDSYMAALVDERFAN---TNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVS 181
           E D  M  ++ +R ++    ++L ++ +D +K       +                 VV+
Sbjct: 118 ELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDL-----------------VVA 177

Query: 182 NIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLV 213
           NIP+NIS+ ++ +L+   + F    LLLQ+E + RL+
Sbjct: 178 NIPYNISSPLVAKLVYGSNTFRSATLLLQKEFSRRLL 197

The following BLAST results are available for this feature:

BLAST of Cmc06g0149421 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049001.1	5.0e-179	96.54	ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa] >TYK175...	[more]
XP_008438106.1	2.5e-178	96.25	PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic [Cucumis...	[more]
XP_004133887.1	2.4e-165	90.75	ribosomal RNA small subunit methyltransferase, chloroplastic [Cucumis sativus] >...	[more]
XP_038878140.1	3.0e-160	88.54	ribosomal RNA small subunit methyltransferase, chloroplastic [Benincasa hispida]	[more]
XP_022147255.1	2.6e-151	83.29	ribosomal RNA small subunit methyltransferase, chloroplastic isoform X1 [Momordi...	[more]

BLAST of Cmc06g0149421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65090	3.9e-110	64.86	Ribosomal RNA small subunit methyltransferase, chloroplastic OS=Arabidopsis thal...	[more]
Q6ME80	2.6e-37	35.27	Ribosomal RNA small subunit methyltransferase A OS=Protochlamydia amoebophila (s...	[more]
Q2RME8	1.3e-28	32.37	Ribosomal RNA small subunit methyltransferase A OS=Moorella thermoacetica (strai...	[more]
Q8YS62	1.3e-28	34.35	Ribosomal RNA small subunit methyltransferase A OS=Nostoc sp. (strain PCC 7120 /...	[more]
C1CMT3	1.7e-28	31.06	Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pneumoniae (str...	[more]

BLAST of Cmc06g0149421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5Y1	2.4e-179	96.54	rRNA adenine N(6)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3AW66	1.2e-178	96.25	rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103483311 PE=3...	[more]
A0A0A0L7J6	1.2e-165	90.75	rRNA adenine N(6)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G124770 P...	[more]
A0A6J1CZM8	1.2e-151	83.29	rRNA adenine N(6)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC1110162...	[more]
A0A6J1FPR1	3.8e-148	83.00	rRNA adenine N(6)-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC11144734...	[more]

BLAST of Cmc06g0149421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01860.1	2.8e-111	64.86	Ribosomal RNA adenine dimethylase family protein	[more]
AT2G47420.1	4.4e-16	30.68	Ribosomal RNA adenine dimethylase family protein	[more]
AT5G66360.2	4.9e-15	27.23	Ribosomal RNA adenine dimethylase family protein	[more]
AT5G66360.1	1.2e-10	29.30	Ribosomal RNA adenine dimethylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020598	Ribosomal RNA adenine methylase transferase, N-terminal	SMART	SM00650	rADcneu6	coord: 78..262 e-value: 4.1E-57 score: 205.7
IPR011530	Ribosomal RNA adenine dimethylase	TIGRFAM	TIGR00755	TIGR00755	coord: 79..332 e-value: 9.6E-55 score: 183.6
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 67..263 e-value: 1.5E-53 score: 183.1
None	No IPR available	PANTHER	PTHR11727:SF27	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE, CHLOROPLASTIC	coord: 39..333
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PFAM	PF00398	RrnaAD	coord: 80..333 e-value: 3.6E-43 score: 147.5
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PANTHER	PTHR11727	DIMETHYLADENOSINE TRANSFERASE	coord: 39..333
IPR001737	Ribosomal RNA adenine methyltransferase KsgA/Erm	PROSITE	PS51689	SAM_RNA_A_N6_MT	coord: 64..336 score: 54.504131
IPR023165	rRNA adenine dimethylase-like, C-terminal	GENE3D	1.10.8.100		coord: 268..335 e-value: 9.0E-17 score: 62.7
IPR020596	Ribosomal RNA adenine methylase transferase, conserved site	PROSITE	PS01131	RRNA_A_DIMETH	coord: 94..121
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 79..335

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0149421.1	Cmc06g0149421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0000154	rRNA modification
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function	GO:0008649	rRNA methyltransferase activity