Cmc05g0146381 (gene) Melon (Charmono) v1.1

Overview
NameCmc05g0146381
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr05: 28911902 .. 28912459 (-)
RNA-Seq ExpressionCmc05g0146381
SyntenyCmc05g0146381
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTACAATAACAAATCCCAAATAAAAGACTTTTGTGGGTTTGTTTGTTGTCTTAAGGAATCATAAATTGGAGTATGTTCCCAAATCACCACACCCCTTTGAAATGAAAGGAGAAGAAAATCCTCCAAAATTCTAGAGCGGCAAATTGCACGAGTGTTGTCCCACACCGGAAGAAAAATTCTTGTACAAAGTGAGCTTTTTACTTTTAATAATGCACCCTCTCGTCGTTCTCCAACTGAAGTCCTTCAATTCCTTTCAACGCAGAGTCGTAGTTCTTTACATGTCCATGTCCTGTGTGCCTTCCAGAAGCGCTCCTCTTTGGATCCGCAGGTCCGACTGGTGGGCTCCTTTGTGCACTCATGCTCTTGTGCAGTGCCCCAGGACTAGCATCCCTAGTTCTTGATCGGTGTGGATCCAATTCGCTTCCCACATATGGGTCCCGGCTGCTCGAGACTGCGGCACGTCTTGATGATCCACTTGATCGTCCCACAATATTAGGCCCTGAAAACTGCAATGCGCCGCAACTCAAGACGTTATTATAACCTAGAAAATTTAATC

mRNA sequence

CTTTACAATAACAAATCCCAAATAAAAGACTTTTGTGGGTTTGTTTGTTGTCTTAAGGAATCATAAATTGGAGTATGTTCCCAAATCACCACACCCCTTTGAAATGAAAGGAGAAGAAAATCCTCCAAAATTCTAGAGCGGCAAATTGCACGAGTGTTGTCCCACACCGGAAGAAAAATTCTTGTACAAAAGTCGTAGTTCTTTACATGTCCATGTCCTGTGTGCCTTCCAGAAGCGCTCCTCTTTGGATCCGCAGGTCCGACTGGTGGGCTCCTTTGTGCACTCATGCTCTTGTGCAGTGCCCCAGGACTAGCATCCCTAGTTCTTGATCGGTGTGGATCCAATTCGCTTCCCACATATGGGTCCCGGCTGCTCGAGACTGCGGCACGTCTTGATGATCCACTTGATCGTCCCACAATATTAGGCCCTGAAAACTGCAATGCGCCGCAACTCAAGACGTTATTATAACCTAGAAAATTTAATC

Coding sequence (CDS)

ATGCTCTTGTGCAGTGCCCCAGGACTAGCATCCCTAGTTCTTGATCGGTGTGGATCCAATTCGCTTCCCACATATGGGTCCCGGCTGCTCGAGACTGCGGCACGTCTTGATGATCCACTTGATCGTCCCACAATATTAGGCCCTGAAAACTGCAATGCGCCGCAACTCAAGACGTTATTATAA

Protein sequence

MLLCSAPGLASLVLDRCGSNSLPTYGSRLLETAARLDDPLDRPTILGPENCNAPQLKTLL
Homology
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BLAST of Cmc05g0146381 vs. NCBI nr
Match: KAF9587781.1 (hypothetical protein IFM89_005656 [Coptis chinensis])

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-04
Identity = 31/40 (77.50%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 5   SAPGLASLVLDRCGSNSLP-TYGSRLLETAARLDDPLDRP 44
           S PGLAS+V  R GS SLP T  SRLLETAARLDDPLDRP
Sbjct: 89  SDPGLASVVRGRDGSVSLPTTIASRLLETAARLDDPLDRP 128

The following BLAST results are available for this feature:
BLAST of Cmc05g0146381 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF9587781.13.2e-0477.50hypothetical protein IFM89_005656 [Coptis chinensis][more]
BLAST of Cmc05g0146381 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc05g0146381 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc05g0146381 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc05g0146381.1Cmc05g0146381.1mRNA