Cmc05g0145171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0145171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr05: 28173009 .. 28174747 (+)
RNA-Seq Expression	Cmc05g0145171
Synteny	Cmc05g0145171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAACAGAGGAGAAGCAGAGTACTGACCGTGAAGGCTGGCCGACAAACTTCCGGTGGAGATATAATCATAAACAAGCAATTTCTCATCTTTAGAGAAGTAAAAAGCTCTTAGCGGAACCACATTTTCATGTTTAATTTTCCCCAAAATCTCCATTTGATTCTCAAATTCCTTTTTCGTCACCACCACATCCTTCAGCCGTTTCACCACCACCGTCGTTCCTTCTTCCAGCACCGCCTTATACGACGTTCCGACGCTTCCTTTCCCCAATACCTCCGCCGAAGCCCTCAACAAATCCTCTAAATCAAAGTTGTAAATCCCACCTTCGAAAAACACCAGCTTGTTCCTCTCCGTCGCCTCCACTGACCCTCCGGTAATGTCGTCTTTCGACGACGATGTTCCAGCTTCCGCTACTGGAATAGATCTCGCTGCCGTTCCCACCGCCGTTGGTGGCTTTGGTGATTTCGTCTGTGTTTTGTTCGACCGGCGACGAATGCAGAGGATTAGGATGAGGAGGAGGAGAAAAGCTGCGAAAACGGCGCCAATTACGATTCCGATAATCGCTGCCGTGGAGAGTTTTTTTGATTTTTTGTTGGGTGGTGGGGTGATTTGTGATGGAGATGGAGAAGGAGTTAATGGGTTGCAAGGTGGGAATGGTCCGCCGCAGAGATCTAAGTTTCCGGCAAAGGAAGAAGCAGGGAATTTCGCCAAGGAATTCGGAATCGAGCCGTTGAGTTTGTTGTTAGAGACATTGAAGTTTGTTAAATTAACGGCGGAGATACTCGGGAGTGAACCGGAGAATCCATTGTTCTGTAAGAAAATCCCACTCAAGTGAGTTAGATTGTCAACAGAAGCCGGAATCGGACCGGAAAATTCGTTCGACGACAAATCCAGCCTAGTCAGCCGAGTCAAACGAGTCAAGCTCGACGGAAACTCGCCGGAGAAAGCATTATCCTGAAGATACAGATTCCTTAGCATTACCAAATTGGAAAAATCCGAAGGGATCTCGCCGGAGAGACGGTTGGAACGGAGACTGAGAACTCGGAGCTGAGTCAATTTCCCAATTGTATTAGCCGGAATCGGTCCGACGAGGCCAACACCAGGCAAACGGAGAGAGTAAACAAAGGACCGATTTGAATCACACTCAACGCCGACCCAATTACAGACGGAATTAGAAAGATTCCATTGAACCCGATTGGCGTGAGGAGTTTTAGAGAAGAAATCGAGAAGGGCTTGTCTATCCTGAGTCGGCTCCGAGTCAACCCACTGAATCATAAGTAGAAGAAGAAAAACAGAGCAAAGAGAAATTGCGGTAGCCATTGTGGATTTAGAGAGAGAAAACAAAAGGGGTCGGAGGAATTAGTGAAAGGAGATGAATAGTGGTATTGTATGGTGGTATTTGAGAAAACCAAAAATGGTTTGCCGACGAAAAGCCATGAGAGAGAGAGAGAAAGAAATGGGTGAAGTGAGAAACAGGGGAAGAGGGAGGTTTTGTAGAGAGAGAAAGAGGATGAATGGCCCACGAAAGTTAAAAAGGAAAAGGAAGAAGAGAAAATCGAGAGTTGAGAGTGGCAGAGAAAACCATTTCCATTTGTAAGCCTTTCTCTTTCTTTTTTTCTTTTTATATAAACTGTTGCAGTGAAATCAAACGAAGAAGATGAAGAAGAAACACAAAACCCTTTTTTCCTTATATATCTTTCCCTCATTCCCACGCGCTCTTCCAATCGTGCAATTTAGTC

mRNA sequence

GGAAAACAGAGGAGAAGCAGAGTACTGACCGTGAAGGCTGGCCGACAAACTTCCGGTGGAGATATAATCATAAACAAGCAATTTCTCATCTTTAGAGAAGTAAAAAGCTCTTAGCGGAACCACATTTTCATGTTTAATTTTCCCCAAAATCTCCATTTGATTCTCAAATTCCTTTTTCGTCACCACCACATCCTTCAGCCGTTTCACCACCACCGTCGTTCCTTCTTCCAGCACCGCCTTATACGACGTTCCGACGCTTCCTTTCCCCAATACCTCCGCCGAAGCCCTCAACAAATCCTCTAAATCAAAGTTGTAAATCCCACCTTCGAAAAACACCAGCTTGTTCCTCTCCGTCGCCTCCACTGACCCTCCGGTAATGTCGTCTTTCGACGACGATGTTCCAGCTTCCGCTACTGGAATAGATCTCGCTGCCGTTCCCACCGCCGTTGGTGGCTTTGGTGATTTCGTCTGTGTTTTGTTCGACCGGCGACGAATGCAGAGGATTAGGATGAGGAGGAGGAGAAAAGCTGCGAAAACGGCGCCAATTACGATTCCGATAATCGCTGCCGTGGAGAGTTTTTTTGATTTTTTGTTGGGTGGTGGGGTGATTTGTGATGGAGATGGAGAAGGAGTTAATGGGTTGCAAGGTGGGAATGGTCCGCCGCAGAGATCTAAGTTTCCGGCAAAGGAAGAAGCAGGGAATTTCGCCAAGGAATTCGGAATCGAGCCGTTGAGTTTGTTGTTAGAGACATTGAAGTTTGTTAAATTAACGGCGGAGATACTCGGGAGTGAACCGGAGAATCCATTGTTCTGTAAGAAAATCCCACTCAAGTGAGTTAGATTGTCAACAGAAGCCGGAATCGGACCGGAAAATTCGTTCGACGACAAATCCAGCCTAGTCAGCCGAGTCAAACGAGTCAAGCTCGACGGAAACTCGCCGGAGAAAGCATTATCCTGAAGATACAGATTCCTTAGCATTACCAAATTGGAAAAATCCGAAGGGATCTCGCCGGAGAGACGGTTGGAACGGAGACTGAGAACTCGGAGCTGAGTCAATTTCCCAATTGTATTAGCCGGAATCGGTCCGACGAGGCCAACACCAGGCAAACGGAGAGAGTAAACAAAGGACCGATTTGAATCACACTCAACGCCGACCCAATTACAGACGGAATTAGAAAGATTCCATTGAACCCGATTGGCGTGAGGAGTTTTAGAGAAGAAATCGAGAAGGGCTTGTCTATCCTGAGTCGGCTCCGAGTCAACCCACTGAATCATAAGTAGAAGAAGAAAAACAGAGCAAAGAGAAATTGCGGTAGCCATTGTGGATTTAGAGAGAGAAAACAAAAGGGGTCGGAGGAATTAGTGAAAGGAGATGAATAGTGGTATTGTATGGTGGTATTTGAGAAAACCAAAAATGGTTTGCCGACGAAAAGCCATGAGAGAGAGAGAGAAAGAAATGGGTGAAGTGAGAAACAGGGGAAGAGGGAGGTTTTGTAGAGAGAGAAAGAGGATGAATGGCCCACGAAAGTTAAAAAGGAAAAGGAAGAAGAGAAAATCGAGAGTTGAGAGTGGCAGAGAAAACCATTTCCATTTGTAAGCCTTTCTCTTTCTTTTTTTCTTTTTATATAAACTGTTGCAGTGAAATCAAACGAAGAAGATGAAGAAGAAACACAAAACCCTTTTTTCCTTATATATCTTTCCCTCATTCCCACGCGCTCTTCCAATCGTGCAATTTAGTC

Coding sequence (CDS)

ATGTCGTCTTTCGACGACGATGTTCCAGCTTCCGCTACTGGAATAGATCTCGCTGCCGTTCCCACCGCCGTTGGTGGCTTTGGTGATTTCGTCTGTGTTTTGTTCGACCGGCGACGAATGCAGAGGATTAGGATGAGGAGGAGGAGAAAAGCTGCGAAAACGGCGCCAATTACGATTCCGATAATCGCTGCCGTGGAGAGTTTTTTTGATTTTTTGTTGGGTGGTGGGGTGATTTGTGATGGAGATGGAGAAGGAGTTAATGGGTTGCAAGGTGGGAATGGTCCGCCGCAGAGATCTAAGTTTCCGGCAAAGGAAGAAGCAGGGAATTTCGCCAAGGAATTCGGAATCGAGCCGTTGAGTTTGTTGTTAGAGACATTGAAGTTTGTTAAATTAACGGCGGAGATACTCGGGAGTGAACCGGAGAATCCATTGTTCTGTAAGAAAATCCCACTCAAGTGA

Protein sequence

MSSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIPIIAAVESFFDFLLGGGVICDGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAKEFGIEPLSLLLETLKFVKLTAEILGSEPENPLFCKKIPLK

Homology

[Close]

BLAST of Cmc05g0145171 vs. NCBI nr
Match: KAF1887369.1 (hypothetical protein Lal_00040971 [Lupinus albus])

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-22
Identity = 79/159 (49.69%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 1   MSSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIP 60
           +SSFDDDVPAS  G   AAV T  GGFGD     F   R Q         A  T P TIP
Sbjct: 105 ISSFDDDVPASPVGTLRAAVATDFGGFGDCRRCRF---RKQNNSKSSNNNAPTTHPTTIP 164

Query: 61  IIAAVESFFDF--------LLGGGVICDGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAK 120
           I+A VESF DF        L   G   DG G G  GL G NGPP RSK PAKE+ GN A+
Sbjct: 165 IMAPVESFLDFSCTEFDGTLSDSG---DGAGAGKKGLHGCNGPPHRSKLPAKEDEGNLAR 224

Query: 121 EFGIEPLSLLLETLKFVKLTAEILGSEPENPLFCKKIPL 152
             GIEP   L ET K   L   +LGS PE  LF KK P+
Sbjct: 225 VSGIEPFKRLFETSKLTNLVV-MLGSLPEKVLFSKKRPV 256

[Close]

BLAST of Cmc05g0145171 vs. NCBI nr
Match: RDX73623.1 (hypothetical protein CR513_46747, partial [Mucuna pruriens])

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-14
Identity = 65/126 (51.59%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 1   MSSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIP 60
           +SSFDDDVPASA     AA  TA  GFG F   L  RRR Q         AA+T P TI 
Sbjct: 122 ISSFDDDVPASAG----AARATAATGFGGFAGCL-RRRRKQSSNSSSNNAAARTDPKTIA 181

Query: 61  IIAAVESFFDFLLG--GGVICDGDGEGV--NGLQGGNGPPQRSKFPAKEEAGNFAKEFGI 120
            +A VESF DFL    G    DGDG G    GLQ  NG PQRS FPA E +GN     GI
Sbjct: 182 TMAPVESFLDFLYARLGFKSDDGDGAGAGKKGLQAFNGGPQRSTFPANEASGNLDSVLGI 241

Query: 121 EPLSLL 123
           EPL  L
Sbjct: 242 EPLRRL 242

[Close]

BLAST of Cmc05g0145171 vs. NCBI nr
Match: RDX82799.1 (hypothetical protein CR513_36362, partial [Mucuna pruriens])

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12
Identity = 59/144 (40.97%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 2   SSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIPI 61
           SSFDDD P SA     A  P   GGF      L  RR+      +    A+K  P  IP 
Sbjct: 81  SSFDDDAPPSANPPRAATTP--CGGFAG----LLRRRQHTNKSSKSNSNASKADPTAIPT 140

Query: 62  IAAVESFFDFL---LGGGVICDGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAKEFGIEP 121
           +AAVESF DF      G    +G G G  G+ GGNG PQRS  P  + AG + +  G+EP
Sbjct: 141 MAAVESFLDFSATGAAGPTEGEGAGAGKKGVHGGNGFPQRSLLPENDVAGKWERVLGMEP 200

Query: 122 LSLLLETLKFVK-LTAEILGSEPE 142
           L  LLET K  +  + E++G E E
Sbjct: 201 LRRLLETSKLTRDFSGEVVGGEFE 218

[Close]

BLAST of Cmc05g0145171 vs. NCBI nr
Match: MCI57416.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-11
Identity = 49/88 (55.68%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 62  IAAVESFFDFLLG---GGVIC-DGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAKEFGIE 121
           +A VESF D   G   GG+   DG G G NG+   NG PQRSKFPAK+++GNF    GIE
Sbjct: 1   MAPVESFLDLCFGLSAGGIESGDGAGAGKNGVHDFNGGPQRSKFPAKDDSGNFESVLGIE 60

Query: 122 PLSLLLETLKFVKLTAEILGSEPENPLF 146
           PL LLLET K  K  A +LG  PEN LF
Sbjct: 61  PLRLLLETSKPFKF-AVMLGRLPENVLF 87

[Close]

BLAST of Cmc05g0145171 vs. NCBI nr
Match: PQQ20223.1 (hypothetical protein Pyn_15869 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-08
Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 40  MQRIRMRRRRKAAKTAPITIPIIAAVESFFDFL---LGGGVICDGDGEGVNGLQGGNGPP 99
           MQ  R R  R  A+  P  I  +AAV+SF DFL   + GGV  DG G G NGL GG+G P
Sbjct: 1   MQSRRTRSNRNKARADPTAIATMAAVDSFLDFLWTGITGGVAGDGAGAGKNGLHGGSGLP 60

Query: 100 QRSKFPAKEEAGNFAKEFGIEPLSLLLETLKFVKLT--AEILG 138
           QR KF    E+G   ++ GIEPL  +    +  +LT  AE +G
Sbjct: 61  QRFKFLVNAESGKLDRDAGIEPLKAVGAQTQNSELTQPAECVG 103

[Close]

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL
Match: A0A6A5NQ73 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00040971 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 79/159 (49.69%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 1   MSSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIP 60
           +SSFDDDVPAS  G   AAV T  GGFGD     F   R Q         A  T P TIP
Sbjct: 105 ISSFDDDVPASPVGTLRAAVATDFGGFGDCRRCRF---RKQNNSKSSNNNAPTTHPTTIP 164

Query: 61  IIAAVESFFDF--------LLGGGVICDGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAK 120
           I+A VESF DF        L   G   DG G G  GL G NGPP RSK PAKE+ GN A+
Sbjct: 165 IMAPVESFLDFSCTEFDGTLSDSG---DGAGAGKKGLHGCNGPPHRSKLPAKEDEGNLAR 224

Query: 121 EFGIEPLSLLLETLKFVKLTAEILGSEPENPLFCKKIPL 152
             GIEP   L ET K   L   +LGS PE  LF KK P+
Sbjct: 225 VSGIEPFKRLFETSKLTNLVV-MLGSLPEKVLFSKKRPV 256

[Close]

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL
Match: A0A371F634 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_46747 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14
Identity = 65/126 (51.59%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 1   MSSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIP 60
           +SSFDDDVPASA     AA  TA  GFG F   L  RRR Q         AA+T P TI 
Sbjct: 122 ISSFDDDVPASAG----AARATAATGFGGFAGCL-RRRRKQSSNSSSNNAAARTDPKTIA 181

Query: 61  IIAAVESFFDFLLG--GGVICDGDGEGV--NGLQGGNGPPQRSKFPAKEEAGNFAKEFGI 120
            +A VESF DFL    G    DGDG G    GLQ  NG PQRS FPA E +GN     GI
Sbjct: 182 TMAPVESFLDFLYARLGFKSDDGDGAGAGKKGLQAFNGGPQRSTFPANEASGNLDSVLGI 241

Query: 121 EPLSLL 123
           EPL  L
Sbjct: 242 EPLRRL 242

[Close]

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL
Match: A0A371FWT4 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_36362 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.1e-13
Identity = 59/144 (40.97%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 2   SSFDDDVPASATGIDLAAVPTAVGGFGDFVCVLFDRRRMQRIRMRRRRKAAKTAPITIPI 61
           SSFDDD P SA     A  P   GGF      L  RR+      +    A+K  P  IP 
Sbjct: 81  SSFDDDAPPSANPPRAATTP--CGGFAG----LLRRRQHTNKSSKSNSNASKADPTAIPT 140

Query: 62  IAAVESFFDFL---LGGGVICDGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAKEFGIEP 121
           +AAVESF DF      G    +G G G  G+ GGNG PQRS  P  + AG + +  G+EP
Sbjct: 141 MAAVESFLDFSATGAAGPTEGEGAGAGKKGVHGGNGFPQRSLLPENDVAGKWERVLGMEP 200

Query: 122 LSLLLETLKFVK-LTAEILGSEPE 142
           L  LLET K  +  + E++G E E
Sbjct: 201 LRRLLETSKLTRDFSGEVVGGEFE 218

[Close]

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL
Match: A0A392TBB6 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-11
Identity = 49/88 (55.68%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 62  IAAVESFFDFLLG---GGVIC-DGDGEGVNGLQGGNGPPQRSKFPAKEEAGNFAKEFGIE 121
           +A VESF D   G   GG+   DG G G NG+   NG PQRSKFPAK+++GNF    GIE
Sbjct: 1   MAPVESFLDLCFGLSAGGIESGDGAGAGKNGVHDFNGGPQRSKFPAKDDSGNFESVLGIE 60

Query: 122 PLSLLLETLKFVKLTAEILGSEPENPLF 146
           PL LLLET K  K  A +LG  PEN LF
Sbjct: 61  PLRLLLETSKPFKF-AVMLGRLPENVLF 87

[Close]

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL
Match: A0A314ZP48 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15869 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 5.3e-09
Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 40  MQRIRMRRRRKAAKTAPITIPIIAAVESFFDFL---LGGGVICDGDGEGVNGLQGGNGPP 99
           MQ  R R  R  A+  P  I  +AAV+SF DFL   + GGV  DG G G NGL GG+G P
Sbjct: 1   MQSRRTRSNRNKARADPTAIATMAAVDSFLDFLWTGITGGVAGDGAGAGKNGLHGGSGLP 60

Query: 100 QRSKFPAKEEAGNFAKEFGIEPLSLLLETLKFVKLT--AEILG 138
           QR KF    E+G   ++ GIEPL  +    +  +LT  AE +G
Sbjct: 61  QRFKFLVNAESGKLDRDAGIEPLKAVGAQTQNSELTQPAECVG 103

The following BLAST results are available for this feature:

BLAST of Cmc05g0145171 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1887369.1	3.9e-22	49.69	hypothetical protein Lal_00040971 [Lupinus albus]	[more]
RDX73623.1	3.0e-14	51.59	hypothetical protein CR513_46747, partial [Mucuna pruriens]	[more]
RDX82799.1	1.3e-12	40.97	hypothetical protein CR513_36362, partial [Mucuna pruriens]	[more]
MCI57416.1	4.0e-11	55.68	hypothetical protein [Trifolium medium]	[more]
PQQ20223.1	1.1e-08	44.66	hypothetical protein Pyn_15869 [Prunus yedoensis var. nudiflora]	[more]

BLAST of Cmc05g0145171 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5NQ73	1.9e-22	49.69	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00040971 PE=4 SV=1	[more]
A0A371F634	1.4e-14	51.59	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_46747 P...	[more]
A0A371FWT4	6.1e-13	40.97	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_36362 P...	[more]
A0A392TBB6	2.0e-11	55.68	Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1	[more]
A0A314ZP48	5.3e-09	44.66	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_158...	[more]

BLAST of Cmc05g0145171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0145171.1	Cmc05g0145171.1	mRNA