Cmc05g0144491 (gene) Melon (Charmono) v1.1

Overview
NameCmc05g0144491
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr05: 27732460 .. 27736962 (+)
RNA-Seq ExpressionCmc05g0144491
SyntenyCmc05g0144491
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTATTTCAATCCAAAATAATAATTAATAAATAATTGGTGGGGCATTTTGCAAAAACGTTTCCGAGATTTCTCCGTCGCCAACGAAACCGGCGAAGCGCTGAGAAGACAACCCACCATGATCGACGTTGAAATCGAGTATAAGGAAGAACTCGAACAACTCCGTAAACGCCCTGCCGCCGCCTTCATCAACTCCTCTCTCCTCCATAACCTCAATCGGAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCTCGAACTCATCCATTTCATATACTTCTCTGATCCCCGATTAGTTGGCCTAGTGAATGGGAACGATAGGGTATTAGTCCGGTTCTGATCGTCCGCGTTTGTGGAAAATTCGAGGAAGGCTACAGCAAATTCTGCTTCGACCGATGAAGCTGCCTTTCTAAAGAGTAAGTGAACTTTTTGTTAGTATTGTAGGAAGCAATAAGCATACCTTTCTCTTATATTGTTTGAAATCTGTTTGATTATTTTTTATGAACATGAGAATTCCTGTAGAATATACTTGATGAACTGAAAGGATTTAGTTTTGATATCATCAGATTGTTCTGTACTTTTCAAGTAATGGCATTAGATAGAAACATAATCATGGTTTTCGGGGAGAAGGAAAACTCAAGCAATTGTACCTTGCTAACAAAAACTTCTTGTTGGAGGATGGATGAATAATCAGATACCGAACAAAACCTGATCAAAGAATGTCTAAAGAAGTACCCAAGAAACTAGTTCTTAAGATATTATTCATGTGATACATTTTGGTTGGTCATTTCTCATATGATAAAATGGCTACTGACGTTTTGTTCATCAAGTTTCTGAAACTCCTTTTGTGCTGCTTCTTACATGACTATGAGTGTATTTACTATTGTTGATAGACTGACTGAAGCTTTTCTGCCTTGGTCTGTGTATGAACTGAGTTGTACTCGAAATTTAGTACTCAAATTATGATATTAGTTAGAAAGACGGCTATTAAGAAAGTTGAATAAAACTAATCACTATTATGTCGAGGGATCTTTCACTAATACTAATCAAAGACGAAAAGCTAAAGTTTGAATTTTCATGGAGATGATAGACACTTCTCTATCATGAAGCTCAGTAGTCTTCCTTATAACTGCTACTTATTCTTAAACAGAGAGTGTATGCTTGCCAAGACTGTTTGTGGTTGAGACATGTTAATGAAATTCATCCCGTGAAACAATGTCTCAATATCACATTAATTTGACAGTGGATCTTTTGGATTCCATCGATGACCTGTAGTTATTTCATCCAACGTTTTTCTTTAAATTCGCCTAGAGTCTGTTTCTTATGGGACCAATCCACCCTAATTAAGTTGTGATGTCACAGTCACATAATACTTTGCTTGTTGCTCAACTTGGCTAAGTTGGGAAATTTTGCAAATCCAATGTAAGTCACATGGGGAGTCTGTTCATTTCATCCAATCTTAGCAAAAGTGGTTTAAGGTTGGATCACTTCTTATCAAGGTGATTTTTGGAAAATTCAAGCGGAGGCATTTAAAGCATCCTTGTTTGATGTCTAAAGATAATACCTTTGGAGTAATAACGGAGTGGAATTGTTTATAGGTATCATCTGAAAACGATATCATTGTAGTCTTTCATTAAGGAAATGCTTAGGGAGTAGTTGACCCTTCGACTTCATGAGTTGGTTTTAAATAACTCAACTTCAATAGTGTTCTGGATTGAAGTTTACACATTTATGAAAGAACTTCATCTTTCCTTATTTTTCTCTTTTGAATAAAGAAATTTCAACTTACTACACCTCCAACATAAATATTTGAACTCTAACATATTAACTCCAAATTTCAGTATTCCACTAACACCCCTTATATTTTTAGTTAAATTTACAAAATATAGACTAGTTTTTAACCTTCCAAAATTTACCTTGGATTTTTAGAACTAAATACTCATTAACCAATCGAAAATTTAATCTAGACCTTAATTAGGAGGGGTGAAAGACAACCTCAAGGCATGTCACTTCGAACATCCAGGACAGGACACCTTTTTGTGCATTTGCTCATTTGCCTTTAGATATTGACATTATTGTCCTAAGGTTCTTAGCACTTGCGATTGGTTCTTGACTTTGTGTAACAAAGTTTATGATACTTTTGCCTCCATTTTTGTGGGACATCCCTTTCACTAGGTGTGGAAGATTTTGTGGCGCACTCTGGTTTTCTTCAAGTTTCTATGGGCGAGAGGAATGGAAGAAGTTTCTGACTCTTTCTCTACTTATAATTCACGTGCAGGTGTTTATTCCATTCATCAATGAAATGTTGTATGATTTAAAAAAAGTTTATAAGCCAATAAGACAAATTATGAATGTGTATGCCAAAGAGATCAGTAGGATCGAAAAGCATGATCTATTATTGAAATAAAACGTTGTTGTTATATGACTAAGATCTTGAGCGAAATATATTGAGAATTGGATTTAGTATCTCTTTGGTCCTGAAGGTTGACCACTTTAAGTACCTGAGCTAAAGTTTGTTTAAGAAATAGTTCTTAAACTATTAGTTTACCTATAAAAAAAATTATGTGACAATAAGGCTTCTGATTAATCATGTATTGTTGAGTTAGACCGCCTACTAGTATTTCTTATAGCGAGGTGACTTCTACTTTTCCTCTTCTCTACCTCCTTTTGTCTCTCTCTTCTTTGACTGTCGTCTCCCTCTTTGATCAAGTGTGAACTCAAATTTTAAGAATCTATTGTGTAATTTGCCTTGAGATCTTTTATCAAGGGTCTCACCTTACCAGGAAAAATCAAATCATAACGAAGAGAAAGAAACTGATGTTACATTTGTGGATTTTTATGCATAAAGTATTGATTTGGTAGATTTTTTAAGGTCCCAAATGAAATATAAGTGGGGACAAATATGTCTCTTTGCATCCCAAACTCAAATTAATAATGTAGGACTTTGTGAACTCAAAATAATAATATTAATTGTCTTACAAATATCATATTGATAACAAAAATAAAAAGTGGAACTTGTCAGCTGTCTATCACTAATGTGGCTCCCACTCTATTTGTCTTAGTTTTTGAACTTTGAAATTAAAGATTTAATTTAACATGATTTAGTTCAAGTTGGAAAAATAATTAAAGACCAGAATGTTTTTTTCTATTAAGATCAATGCAACCAAATATATCATATCTGTATTCTCATCCTCAATGTTGAAACTATTTCAACATTGACACATGATTTTGAAGAAATTTTTTGTGACTTCTAAATTGCTACCCAATTGAGTTACAAATTTCAAAGTACAAAATCTATCGTTACGAACTTCAAATTGTTACTTTTTTCTATATTTATGAGTGGTCGAACTAACTTATACAACTAATCTCACAGGGCGACCTATTTGATGCCAAAAAAATTCATAAAAAATTAATTCTAAGGTAGGTGGCTTAGTTAGTTATTGAAATTAATTGTTACTAAACAAGTTTCCAACACCTATCGATGACTAAAAATAATTCCTCCAAGAAAATTGCGAAATCATCCCATGGAATGCTACAACCAAGGAGGGAAAAAATTGCAAAATTTCCTCCATATGTTTTCTGTTAAAGCTGACAAACAAATTGAACCTACCTAATTAGAAGCATTGAATGAGATCGGTTAAATATTTAAGGAAATTAATTTTCTAGTTTTGGAAAGATAAACATTAGTTTAATAACATTGATTTTAACTAACCAACTTGTTTAACCCCATGGCATCAAATCACAATTTTGCTATTCTTACCTTAATGGAATTTTGCTTGAAGCCAAGAAAATCTCTGCTTCTGACAACATAAGACTACTAACTAATTTAGCAGAAGAAATTGTTATATATAATATGGATCCACAACATCACAAACATAAGACGAGAAGTTCATTACCAACAAGGCCCACAATGTTCCTACCCCCTAAAGCAAAGGCTAACACTAGCTAAACTTCCCTCGCTACTCGAAACTCAACAATTTGGAGGGCCAATCGATATTCTCACTTCCTCTTCTTGGCTGGTGGCTGGGGTGTTTCCTCCTCTTCGTCTTCTTCGTCCTCATCTTCGTCCTCATCGTCGTCGTCGTCATCATCATCTCCATTGTCGTCATCGTCATCGTCATCTTCCTCATCACCTCCAGCTCTTCCATCACCATTTGCTTCAGGATCGTCCTCTGGATCACCATCATCACCTTCTTCACCTCCAGAGAAATCTTCGTCGTCGTCGTCGTCATCCTGATCATTTGCGTCATCGTCATCGTCATCATCTTCATCATCCTCTGTTTCACTACCATCTTTGTTTTCCTGATCAGGCCTTTCCTTTTTGTGAAGTTCAGAGAAAGGAAACCTTGGAAAGGAGAAGAGGCAAGTAATTTCAAAACCAACCTAAAAGTATCAAAGTAAAAATACATAAATGACTTGAAGTTTTATTACCTCTCCTCAATTGCAGCCAATCCTGGTGTACCATTAGCAATATTTAACATAGCTCCTGCCTGA

mRNA sequence

TTGTATTTCAATCCAAAATAATAATTAATAAATAATTGGTGGGGCATTTTGCAAAAACGTTTCCGAGATTTCTCCGTCGCCAACGAAACCGGCGAAGCGCTGAGAAGACAACCCACCATGATCGACGTTGAAATCGAGTATAAGGAAGAACTCGAACAACTCCGTAAACGCCCTGCCGCCGCCTTCATCAACTCCTCTCTCCTCCATAACCTCAATCGGAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCTCGAACTCATCCATTTCATATACTTCTCTGATCCCCGATTAGTTGGCCTAGTGAATGGGAACGATAGGGTATTAGTCCGGTTCTGATCGTCCGCGTTTGTGGAAAATTCGAGGAAGGCTACAGCAAATTCTGCTTCGACCGATGAAGCTGCCTTTCTAAAGAGTGTGGAAGATTTTGTGGCGCACTCTGGTTTTCTTCAAGTTTCTATGGGCGAGAGGAATGGAAGAAGTTTCTGACTCTTTCTCTACTTATAATTCACGTGCAGGTGTTTATTCCATTCATCAATGAAATGTTGTATGATTTAAAAAAAGTTTATAAGCCAATAAGACAAATTATGAATGTGTATGCCAAAGAGATCAGTAGGATCGAAAAGCATGATCTATTATTGAAATAAAACGTTGTTGTTATATGACTAAGATCTTGAGCGAAATATATTGAGAATTGGATTTAGTATCTCTTTGGTCCTGAAGGTTGACCACTTTAAGTACCTGAGCTAAAGTTTGTTTAAGAAATAGTTCTTAAACTATTAGTTTACCTATAAAAAAAATTATGTGACAATAAGGCTTCTGATTAATCATGTATTGTTGAGTTAGACCGCCTACTAGTATTTCTTATAGCGAGGTGACTTCTACTTTTCCTCTTCTCTACCTCCTTTTGTCTCTCTCTTCTTTGACTGTCGTCTCCCTCTTTGATCAAGTGTGAACTCAAATTTTAAGAATCTATTGTGTAATTTGCCTTGAGATCTTTTATCAAGGGTCTCACCTTACCAGGAAAAATCAAATCATAACGAAGAGAAAGAAACTGATGTTACATTTGTGGATTTTTATGCATAAAGTATTGATTTGGTAGATTTTTTAAGGTCCCAAATGAAATATAAGTGGGGACAAATATGTCTCTTTGCATCCCAAACTCAAATTAATAATGTAGGACTTTGTGAACTCAAAATAATAATATTAATTGTCTTACAAATATCATATTGATAACAAAAATAAAAAGTGGAACTTGTCAGCTGTCTATCACTAATGTGGCTCCCACTCTATTTGTCTTAGTTTTTGAACTTTGAAATTAAAGATTTAATTTAACATGATTTAGTTCAAGTTGGAAAAATAATTAAAGACCAGAATGTTTTTTTCTATTAAGATCAATGCAACCAAATATATCATATCTGTATTCTCATCCTCAATGTTGAAACTATTTCAACATTGACACATGATTTTGAAGAAATTTTTTGTGACTTCTAAATTGCTACCCAATTGAGTTACAAATTTCAAAGTACAAAATCTATCGTTACGAACTTCAAATTGTTACTTTTTTCTATATTTATGAGTGGTCGAACTAACTTATACAACTAATCTCACAGGGCGACCTATTTGATGCCAAAAAAATTCATAAAAAATTAATTCTAAGGTAGGTGGCTTAGTTAGTTATTGAAATTAATTGTTACTAAACAAGTTTCCAACACCTATCGATGACTAAAAATAATTCCTCCAAGAAAATTGCGAAATCATCCCATGGAATGCTACAACCAAGGAGGGAAAAAATTGCAAAATTTCCTCCATATGTTTTCTGTTAAAGCTGACAAACAAATTGAACCTACCTAATTAGAAGCATTGAATGAGATCGGTTAAATATTTAAGGAAATTAATTTTCTAGTTTTGGAAAGATAAACATTAGTTTAATAACATTGATTTTAACTAACCAACTTGTTTAACCCCATGGCATCAAATCACAATTTTGCTATTCTTACCTTAATGGAATTTTGCTTGAAGCCAAGAAAATCTCTGCTTCTGACAACATAAGACTACTAACTAATTTAGCAGAAGAAATTGTTATATATAATATGGATCCACAACATCACAAACATAAGACGAGAAGTTCATTACCAACAAGGCCCACAATGTTCCTACCCCCTAAAGCAAAGGCTAACACTAGCTAAACTTCCCTCGCTACTCGAAACTCAACAATTTGGAGGGCCAATCGATATTCTCACTTCCTCTTCTTGGCTGGTGGCTGGGGTGTTTCCTCCTCTTCGTCTTCTTCGTCCTCATCTTCGTCCTCATCGTCGTCGTCGTCATCATCATCTCCATTGTCGTCATCGTCATCGTCATCTTCCTCATCACCTCCAGCTCTTCCATCACCATTTGCTTCAGGATCGTCCTCTGGATCACCATCATCACCTTCTTCACCTCCAGAGAAATCTTCGTCGTCGTCGTCGTCATCCTGATCATTTGCGTCATCGTCATCGTCATCATCTTCATCATCCTCTGTTTCACTACCATCTTTGTTTTCCTGATCAGGCCTTTCCTTTTTGTGAAGTTCAGAGAAAGGAAACCTTGGAAAGGAGAAGAGGCAAGTAATTTCAAAACCAACCTAAAAGTATCAAAGTAAAAATACATAAATGACTTGAAGTTTTATTACCTCTCCTCAATTGCAGCCAATCCTGGTGTACCATTAGCAATATTTAACATAGCTCCTGCCTGA

Coding sequence (CDS)

ATGATCGACGTTGAAATCGAGTATAAGGAAGAACTCGAACAACTCCGTAAACGCCCTGCCGCCGCCTTCATCAACTCCTCTCTCCTCCATAACCTCAATCGGAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCTCGAACTCATCCATTTCATATACTTCTCTGA

Protein sequence

MIDVEIEYKEELEQLRKRPAAAFINSSLLHNLNRNKDPASKAQRLGISSRTHPFHILL
Homology
[Close]
BLAST of Cmc05g0144491 vs. NCBI nr
Match: KGN60724.1 (hypothetical protein Csa_019232 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 1  MIDVEIEYKEELEQLRKRPAAAFINSSLLHNLNRNKDPASKAQRLGISS 50
          MIDVEIE KEELEQLRKRPAAA   SSLLHNL+RNKDPASKAQRLGISS
Sbjct: 8  MIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS 56

[Close]
BLAST of Cmc05g0144491 vs. NCBI nr
Match: DAD45067.1 (TPA_asm: hypothetical protein HUJ06_003297 [Nelumbo nucifera])

HSP 1 Score: 56.6 bits (135), Expect = 8.2e-05
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 2  IDVEIEYKEELEQLRKR----PAAAFINSSLLHNLNRNKDPASKAQRLGISS 50
          I+V++E KEELE+ RKR    PA     +S+LH+LNRNKDP++K+QR+G+SS
Sbjct: 9  IEVKVEDKEELEEARKRATAGPAPPTGAASILHHLNRNKDPSTKSQRIGLSS 60

[Close]
BLAST of Cmc05g0144491 vs. NCBI nr
Match: KAG6586369.1 (Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 34/58 (58.62%), Postives = 37/58 (63.79%), Query Frame = 0 

Query: 2  IDVEIEYKEELEQLRKRPAAA--------------FINSSLLHNLNRNKDPASKAQRL 46
          I+V+IE KEELEQ RKR AAA                 +SLLHNLNRNKDP SKAQRL
Sbjct: 9  IEVKIEDKEELEQARKRAAAAAAAAAASTTTDTTSSAAASLLHNLNRNKDPTSKAQRL 66

[Close]
BLAST of Cmc05g0144491 vs. ExPASy TrEMBL
Match: A0A0A0LI59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008400 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-13
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 1  MIDVEIEYKEELEQLRKRPAAAFINSSLLHNLNRNKDPASKAQRLGISS 50
          MIDVEIE KEELEQLRKRPAAA   SSLLHNL+RNKDPASKAQRLGISS
Sbjct: 8  MIDVEIEDKEELEQLRKRPAAASTYSSLLHNLSRNKDPASKAQRLGISS 56

[Close]
BLAST of Cmc05g0144491 vs. ExPASy TrEMBL
Match: A0A0A0LFB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008650 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06
Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 0 

Query: 2  IDVEIEYKEELEQLRKRPAAAFINS------------SLLHNLNRNKDPASKAQRLGISS 50
          I+V+IE KEELEQ RKR AAA   +            SLLHN+NRNKD ASKAQRLGISS
Sbjct: 9  IEVKIEDKEELEQARKRAAAAASTTTTTTTDATSAAGSLLHNINRNKDQASKAQRLGISS 68

[Close]
BLAST of Cmc05g0144491 vs. ExPASy TrEMBL
Match: A0A7J6VJG6 (Uncharacterized protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_025150 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.5e-04
Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 2  IDVEIEYKEELEQLRKRPAAAFIN-----SSLLHNLNRNKDPASKAQRLGI 48
          I+V++E KEELE+ RKR AAA        +S+LH+L++NKDP++K+QR+GI
Sbjct: 9  IEVQLEDKEELEEARKRSAAATNTATTGAASVLHHLDKNKDPSNKSQRIGI 59

The following BLAST results are available for this feature:
BLAST of Cmc05g0144491 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60724.11.1e-1289.80hypothetical protein Csa_019232 [Cucumis sativus][more]
DAD45067.18.2e-0555.77TPA_asm: hypothetical protein HUJ06_003297 [Nelumbo nucifera][more]
KAG6586369.12.4e-0458.62Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. soro... [more]
BLAST of Cmc05g0144491 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc05g0144491 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI595.2e-1389.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008400 PE=4 SV=1[more]
A0A0A0LFB11.6e-0661.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008650 PE=4 SV=1[more]
A0A7J6VJG67.5e-0452.94Uncharacterized protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_025150 PE=... [more]
BLAST of Cmc05g0144491 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc05g0144491.1Cmc05g0144491.1mRNA