Cmc05g0139981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0139981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	SHSP domain-containing protein
Location	CMiso1.1chr05: 24480584 .. 24481151 (+)
RNA-Seq Expression	Cmc05g0139981
Synteny	Cmc05g0139981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCTATAAATGATGATCTCTCCAATATCTTTCCCCATAATCTTCAAAAAGAGGTTAGAGGTTTGGATAATCAGAGTGTGTCTTGAGAAAATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATCAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCGGAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCCCTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGATTTTTCTTATCCTAAGTGTGTTTTGTTGCTTTGACTATAGCTCACATGTGTTTCGTTAATGGATGGATATTATTATTGTTCATATATAACTTTTATGGTTTTTATATGTAATGTATAATATGGATTGTTGTAGGACTGTTTGT

mRNA sequence

TTCCTCTATAAATGATGATCTCTCCAATATCTTTCCCCATAATCTTCAAAAAGAGGTTAGAGGTTTGGATAATCAGAGTGTGTCTTGAGAAAATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATCAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCGGAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCCCTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGATTTTTCTTATCCTAAGTGTGTTTTGTTGCTTTGACTATAGCTCACATGTGTTTCGTTAATGGATGGATATTATTATTGTTCATATATAACTTTTATGGTTTTTATATGTAATGTATAATATGGATTGTTGTAGGACTGTTTGT

Coding sequence (CDS)

ATGATGATCTCTCCAATATCTTTCCCCATAATCTTCAAAAAGAGGTTAGAGGTTTGGATAATCAGAGTGTGTCTTGAGAAAATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATCAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCGGAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCCCTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGA

Protein sequence

MMISPISFPIIFKKRLEVWIIRVCLEKMGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI

Homology

[Close]

BLAST of Cmc05g0139981 vs. NCBI nr
Match: KAA0056096.1 (hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ96421.1 hypothetical protein E5676_scaffold546G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 5.9e-54
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 28  MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 87
           MGLLEIAGIGGRRWECHY+KLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 88  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 138
           LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

[Close]

BLAST of Cmc05g0139981 vs. NCBI nr
Match: KGN61039.1 (hypothetical protein Csa_021124 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 28  MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 87
           M LLEIAGIGGRRWECHY+KLN SGGSN    V++MRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLN-SGGSNR---VVVMRRRRWVKKMLKRGMKGFRLYRFTR 60

Query: 88  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 138
           L+SSFGLKVSFLMSLSRRIREIV+RMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

[Close]

BLAST of Cmc05g0139981 vs. NCBI nr
Match: KAG6599155.1 (Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.5 bits (332), Expect = 2.8e-27
Identity = 74/111 (66.67%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 26  EKMGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRF 85
           E+MGLLE AGIGGRRW   Y+KL+           ++  RRRW+KK LKRG KGFRLYR 
Sbjct: 450 EQMGLLETAGIGGRRWN-QYEKLHCEDND------VVKCRRRWMKKTLKRGKKGFRLYRL 509

Query: 86  TRLRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 137
           TR R SF LKVSFL+ +SRRIREIVNRMK VEDVC N+IF TQWGLP LSY
Sbjct: 510 TRSR-SFCLKVSFLVLMSRRIREIVNRMK-VEDVCANVIFFTQWGLPTLSY 551

[Close]

BLAST of Cmc05g0139981 vs. NCBI nr
Match: KAF5946811.1 (hypothetical protein HYC85_017039 [Camellia sinensis])

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-08
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 38  GRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLKVS 97
           G RW   Y++L     SN+R  V +  RRRW+ +M  + +KGFRL +  RL       V 
Sbjct: 8   GGRWTTRYKRLT----SNDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKRLNWKAFSIVM 67

Query: 98  FLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 137
               +++   E+VNRMK  +++CP IIFS QWGLPVLS+
Sbjct: 68  LPRRMAQIYAEVVNRMK-TDEICPAIIFSGQWGLPVLSH 100

[Close]

BLAST of Cmc05g0139981 vs. NCBI nr
Match: EOY11805.1 (Uncharacterized protein TCM_026865 [Theobroma cacao])

HSP 1 Score: 67.8 bits (164), Expect = 8.4e-08
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 36  IGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLK 95
           +GG    C Y+KL + G +          RRRW+KKM   G+KG RL R  +L++     
Sbjct: 10  LGGHPVPCRYEKLRNVGDAR--------PRRRWVKKM-SGGLKGLRLSRSRKLKTL--CS 69

Query: 96  VSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 137
           V F   ++R   +I +R+K    +CPNIIF+T WGLP LS+
Sbjct: 70  VVFANRITRIYADIAHRLKMDGTLCPNIIFATHWGLPTLSH 99

[Close]

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL
Match: A0A5D3BCS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00490 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.9e-54
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 28  MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 87
           MGLLEIAGIGGRRWECHY+KLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 88  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 138
           LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

[Close]

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL
Match: A0A0A0LJ29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 28  MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 87
           M LLEIAGIGGRRWECHY+KLN SGGSN    V++MRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLN-SGGSNR---VVVMRRRRWVKKMLKRGMKGFRLYRFTR 60

Query: 88  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 138
           L+SSFGLKVSFLMSLSRRIREIV+RMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

[Close]

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL
Match: A0A7J7H3I9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-08
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 38  GRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLKVS 97
           G RW   Y++L     SN+R  V +  RRRW+ +M  + +KGFRL +  RL       V 
Sbjct: 8   GGRWTTRYKRLT----SNDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKRLNWKAFSIVM 67

Query: 98  FLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 137
               +++   E+VNRMK  +++CP IIFS QWGLPVLS+
Sbjct: 68  LPRRMAQIYAEVVNRMK-TDEICPAIIFSGQWGLPVLSH 100

[Close]

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL
Match: A0A061F3B0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 36  IGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLK 95
           +GG    C Y+KL + G +          RRRW+KKM   G+KG RL R  +L++     
Sbjct: 10  LGGHPVPCRYEKLRNVGDAR--------PRRRWVKKM-SGGLKGLRLSRSRKLKTL--CS 69

Query: 96  VSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 137
           V F   ++R   +I +R+K    +CPNIIF+T WGLP LS+
Sbjct: 70  VVFANRITRIYADIAHRLKMDGTLCPNIIFATHWGLPTLSH 99

[Close]

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL
Match: A0A5N5H511 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_023915 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.3e-08
Identity = 47/101 (46.53%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 36  IGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLK 95
           I G R  C+YQKL  S     R       R++W+KKM  R +KGFRL R  +L       
Sbjct: 6   IVGGRLGCNYQKLTKSNEKLGR-----PGRQQWVKKMNGR-LKGFRLSRSRKLTLKIFSV 65

Query: 96  VSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 137
           V +   LSR   + VNRMK V+   P IIFSTQWGLPVLS+
Sbjct: 66  VVWTSRLSRICSDTVNRMK-VDGAYPTIIFSTQWGLPVLSH 99

The following BLAST results are available for this feature:

BLAST of Cmc05g0139981 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056096.1	5.9e-54	99.09	hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ9642...	[more]
KGN61039.1	2.3e-45	88.18	hypothetical protein Csa_021124 [Cucumis sativus]	[more]
KAG6599155.1	2.8e-27	66.67	Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAF5946811.1	4.9e-08	42.42	hypothetical protein HYC85_017039 [Camellia sinensis]	[more]
EOY11805.1	8.4e-08	39.60	Uncharacterized protein TCM_026865 [Theobroma cacao]	[more]

BLAST of Cmc05g0139981 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCS3	2.9e-54	99.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LJ29	1.1e-45	88.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1	[more]
A0A7J7H3I9	2.4e-08	42.42	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1	[more]
A0A061F3B0	4.1e-08	39.60	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1	[more]
A0A5N5H511	5.3e-08	46.53	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]

BLAST of Cmc05g0139981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35123	OS07G0633900 PROTEIN-RELATED	coord: 37..136
None	No IPR available	PANTHER	PTHR35123:SF3	OS07G0633900 PROTEIN	coord: 37..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0139981.1	Cmc05g0139981.1	mRNA