Cmc05g0133341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0133341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr05: 13949567 .. 13950046 (-)
RNA-Seq Expression	Cmc05g0133341
Synteny	Cmc05g0133341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCACACTCAATTCTTTTGTCCTGTCAAAATCCTTCACACTGATAATGCTTTGGACTATAAAGACTCCACAATTCTTTCTTTTTTCTCCCAACAGGGCACTCTTGTTCAGCGCTCTTGTCCACACACCTCTCAAGAAAGTAGGCATGCTGAGCGTAAACATCGCCACATTCTTGACTCGGTACATGCCCTCCTTCTTTCCATCTCCTGTCTTAAAAATTTTTGGGGTAAGGTTACTCTTACATCTATCTATAACATCAACCGTCTTCCTTCCTCTGTTCTTCAAAATATTTCATCATTCGAAAGACTATATGGTACTCCTCCCAACTACTCTAACCTTAAAAGTTTTGGTAGTACATGCTTTGTTCTTCTTCACTCTCAGGAACACACTAAACTTAAACCACATGCCCATTGCTCTTGCTTTTTTAGCTATGACATAGAACATAAAGGTTTTTCGATGTTGGGATCCTTTTTCTAA

mRNA sequence

ATGATTCACACTCAATTCTTTTGTCCTGTCAAAATCCTTCACACTGATAATGCTTTGGACTATAAAGACTCCACAATTCTTTCTTTTTTCTCCCAACAGGGCACTCTTGTTCAGCGCTCTTGTCCACACACCTCTCAAGAAAGTAGGCATGCTGAGCGTAAACATCGCCACATTCTTGACTCGGTACATGCCCTCCTTCTTTCCATCTCCTGTCTTAAAAATTTTTGGGGTAAGGTTACTCTTACATCTATCTATAACATCAACCGTCTTCCTTCCTCTGTTCTTCAAAATATTTCATCATTCGAAAGACTATATGGTACTCCTCCCAACTACTCTAACCTTAAAAGTTTTGGTAGTACATGCTTTGTTCTTCTTCACTCTCAGGAACACACTAAACTTAAACCACATGCCCATTGCTCTTGCTTTTTTAGCTATGACATAGAACATAAAGGTTTTTCGATGTTGGGATCCTTTTTCTAA

Coding sequence (CDS)

ATGATTCACACTCAATTCTTTTGTCCTGTCAAAATCCTTCACACTGATAATGCTTTGGACTATAAAGACTCCACAATTCTTTCTTTTTTCTCCCAACAGGGCACTCTTGTTCAGCGCTCTTGTCCACACACCTCTCAAGAAAGTAGGCATGCTGAGCGTAAACATCGCCACATTCTTGACTCGGTACATGCCCTCCTTCTTTCCATCTCCTGTCTTAAAAATTTTTGGGGTAAGGTTACTCTTACATCTATCTATAACATCAACCGTCTTCCTTCCTCTGTTCTTCAAAATATTTCATCATTCGAAAGACTATATGGTACTCCTCCCAACTACTCTAACCTTAAAAGTTTTGGTAGTACATGCTTTGTTCTTCTTCACTCTCAGGAACACACTAAACTTAAACCACATGCCCATTGCTCTTGCTTTTTTAGCTATGACATAGAACATAAAGGTTTTTCGATGTTGGGATCCTTTTTCTAA

Protein sequence

MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILDSVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGSTCFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGFSMLGSFF

Homology

[Close]

BLAST of Cmc05g0133341 vs. NCBI nr
Match: KAA0064888.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 8.4e-60
Identity = 114/152 (75.00%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++  AERKHRHILD
Sbjct: 1   MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 60

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC + FWG+  LTS+Y INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 61  SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGYA 120

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P A   CF  Y  EHKGF
Sbjct: 121 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGF 152

[Close]

BLAST of Cmc05g0133341 vs. NCBI nr
Match: KAA0025466.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 8.4e-60
Identity = 115/152 (75.66%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++  AERKHRHILD
Sbjct: 497 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 556

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC + FWG+  LTS+Y INRLPSSVLQNIS FERLYGTPPNYSNLK FG  
Sbjct: 557 SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCA 616

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLL   EHTKL+P A   CF  YD EHKGF
Sbjct: 617 CFVLLQPHEHTKLEPRARLCCFLGYDTEHKGF 648

[Close]

BLAST of Cmc05g0133341 vs. NCBI nr
Match: KAA0037551.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03121.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 113/152 (74.34%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++  A+RKHRHILD
Sbjct: 299 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAKRKHRHILD 358

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC + FWG+  LTS+Y INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 359 SVRALLLSDSCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 418

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P     CF  YD EHKGF
Sbjct: 419 CFVLLHPHEHTKLEPRVRLCCFLGYDTEHKGF 450

[Close]

BLAST of Cmc05g0133341 vs. NCBI nr
Match: TYJ98155.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-59
Identity = 113/152 (74.34%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++   ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC K FWG+  LTS+Y+INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P A   CF  Y  EHKGF
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGF 552

[Close]

BLAST of Cmc05g0133341 vs. NCBI nr
Match: KAA0050251.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 3.2e-59
Identity = 113/152 (74.34%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++   ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC K FWG+  LTS+Y+INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P A   CF  Y  EHKGF
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGF 552

[Close]

BLAST of Cmc05g0133341 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           ++  +F   +  L++DN  ++    +  + SQ G     S PHT + +  +ERKHRHI++
Sbjct: 556 LVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVE 615

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
               LL   S  K +W      ++Y INRLP+ +LQ  S F++L+G PPNY  LK FG  
Sbjct: 616 MGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCA 675

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGFSML 156
           C+  L      KL+  +    F  Y +    +  L
Sbjct: 676 CYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCL 708

[Close]

BLAST of Cmc05g0133341 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-17
Identity = 49/155 (31.61%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           ++  +F   +   ++DN  ++    +  +FSQ G     S PHT + +  +ERKHRHI++
Sbjct: 577 LLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVE 636

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           +   LL   S  K +W      ++Y INRLP+ +LQ  S F++L+GT PNY  L+ FG  
Sbjct: 637 TGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCA 696

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGFSML 156
           C+  L      KL   +    F  Y +    +  L
Sbjct: 697 CYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCL 729

[Close]

BLAST of Cmc05g0133341 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 44/151 (29.14%), Postives = 73/151 (48.34%), Query Frame = 0


Query: 6   FFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILDSVHAL 65
           F   V  L+ DN  +Y  + +  F  ++G     + PHT Q +  +ER  R I +    +
Sbjct: 540 FNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTM 599

Query: 66  LLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISS--FERLYGTPPNYSNLKSFGSTCFV 125
           +      K+FWG+  LT+ Y INR+PS  L + S   +E  +   P   +L+ FG+T +V
Sbjct: 600 VSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYV 659

Query: 126 LLHSQEHTKLKPHAHCSCFFSYDIEHKGFSM 155
            + +++  K    +  S F  Y  E  GF +
Sbjct: 660 HIKNKQ-GKFDDKSFKSIFVGY--EPNGFKL 687

[Close]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL
Match: A0A5A7VBA1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002020 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.1e-60
Identity = 114/152 (75.00%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++  AERKHRHILD
Sbjct: 1   MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 60

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC + FWG+  LTS+Y INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 61  SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGYA 120

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P A   CF  Y  EHKGF
Sbjct: 121 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGF 152

[Close]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL
Match: A0A5A7SI12 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00670 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.1e-60
Identity = 115/152 (75.66%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++  AERKHRHILD
Sbjct: 497 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 556

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC + FWG+  LTS+Y INRLPSSVLQNIS FERLYGTPPNYSNLK FG  
Sbjct: 557 SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCA 616

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLL   EHTKL+P A   CF  YD EHKGF
Sbjct: 617 CFVLLQPHEHTKLEPRARLCCFLGYDTEHKGF 648

[Close]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL
Match: A0A5D3BTS2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00580 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.9e-60
Identity = 113/152 (74.34%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++  A+RKHRHILD
Sbjct: 299 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAKRKHRHILD 358

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC + FWG+  LTS+Y INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 359 SVRALLLSDSCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 418

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P     CF  YD EHKGF
Sbjct: 419 CFVLLHPHEHTKLEPRVRLCCFLGYDTEHKGF 450

[Close]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL
Match: A0A5D3BI36 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00360 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 113/152 (74.34%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++   ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC K FWG+  LTS+Y+INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P A   CF  Y  EHKGF
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGF 552

[Close]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL
Match: A0A5A7U9P9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00970 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 113/152 (74.34%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MIHTQFFCPVKILHTDNALDYKDSTILSFFSQQGTLVQRSCPHTSQESRHAERKHRHILD 60
           MI TQF CP+K L TDNAL+YKDST+LSF SQQGTLVQRSCPHTSQ++   ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  SVHALLLSISCLKNFWGKVTLTSIYNINRLPSSVLQNISSFERLYGTPPNYSNLKSFGST 120
           SV ALLLS SC K FWG+  LTS+Y+INRLPSSVLQNIS FE+LYGTPPNYSNLK+FG  
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHSQEHTKLKPHAHCSCFFSYDIEHKGF 153
           CFVLLH  EHTKL+P A   CF  Y  EHKGF
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGF 552

The following BLAST results are available for this feature:

BLAST of Cmc05g0133341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064888.1	8.4e-60	75.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0025466.1	8.4e-60	75.66	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037551.1	1.4e-59	74.34	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03121.1 putative m...	[more]
TYJ98155.1	3.2e-59	74.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0050251.1	3.2e-59	74.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc05g0133341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	1.8e-17	32.26	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.1e-17	31.61	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.4e-09	29.14	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBA1	4.1e-60	75.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SI12	4.1e-60	75.66	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BTS2	6.9e-60	74.34	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BI36	1.5e-59	74.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U9P9	1.5e-59	74.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc05g0133341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..135 e-value: 1.8E-15 score: 58.8
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 7..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0133341.1	Cmc05g0133341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding