Cmc05g0131031 (gene) Melon (Charmono) v1.1

Overview
NameCmc05g0131031
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr05: 10038446 .. 10054698 (+)
RNA-Seq ExpressionCmc05g0131031
SyntenyCmc05g0131031
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTGAAGAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGGTAAAAATCCTTTAATTCAACATTCTTTCTTAAAATAGATTCAAGACAAAAAAATGAACTTATTTTCATACTACAACTCCTTGTATTTATTCTATAAGTTTTCTTCTTAAGGCTACAAGACTTTGATTTGTTATTTTGTTGAATATCACTTCTTGTTCTAACAAAATTAGTTGTAATTGATTTGATTCTTTTCTTCAACAAGTGTAGAAAAGAAGTTGAAGCCCTCTTGCAGGAGATAGTGAAGGGACGAAAACTCTTTCCAGCGGAAGAATTACAGAGACCCAATTTTAATTGGAACCTTAAAAATACTAATACATTGGCAAAAAATTACAAAACTAATTTTTTATGGTTAAACGCTGTGAAGAAAATACAAAGAAGAAGAACTTAGTCTCGTTGACGACTCTGAATATACCAAACACCAACTTGGGGCACCACCACTTGGAAACCTTCCTATTCTCTAATTGAGATGGTTTGTGGGAACCAAAATTGGATTGAGGAAATTTTTTTAGAGAGAAAAAGTTGAGAGAATGCGATGACCTTCTGTGTTTTTGTTACGCAAAGAATTCCTTCTTCTTTGTTTGAAGAAGAGGGAAGTTAGAGAGAATAAATGGGAACGTGGAAAAACCACTCACGTTCCTTATTAATTTAATAAATAAATATTAAATTAATTAAATCATATTTAATTAATATTTCATTTAAATCATATTTAAATGAATATCTCTCGCATAACCTATAGTTTTAATTTAATTAAACCAAATTAAACTAAACTATTAATTAATTCTCCAATTAATTACTTTCTAAATTAAATATCTTATATTTAATTTAATCCAAAATTTGAATCATATTTAAATATAAATTTCTCTCATAACCTATAGTTTTAATATGTATCGCATACACATTAAATTTTAACCTATAGTTTTAATATGAATCTAATTCACATTAAACTAATATTTGAACTCATTCAAATATTTTATTCTCTCGTAATTTAATTTTGAATCATATCCAAAATTAAATTTATATAATAAAGTCTAATTAAAATATAAACTTTATATTATGAGTATCAATATACATTATATTAATTCCCAAAGTAAATTTGAACATTTCAAATTACAACCAATATAAATAAATCTCATTACTCTTTATGAGTTAGGAAGGGGACCTAATGGACCTACAAATCAAAAGCTACAACGATATGAGATTAATTGGCTAAATTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTACACTCCACTAAAGACTAACAGCTGAACTCTTCTCACGTAGATATATTTCTGTGTCCACGGATATACACCAATACCAGTAAGTTAGTCCTTCACAAGTGTTCGTAACACCAGCTGGGTCAAATTATCGTTTTACTCCTAGATTACTTCTAGTCCTTAAATACCAGTGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCACTATACAGAAAACCCCTCTCGTGCCATAGAGAGGGTAGGACCCTTTGTTCAAGTCTCTGAGACACTATTTAAGGGAACACTTATCTACTTACCCTAAAGGTGGGAATGAGTGAATTCCATATTGTGTGATTATGTTCCCAGCTCCTCACTCGGTCTTGTCCCCAAAATGATAAGCATATTGAGTCGGCAATCTGGCCACTCTCACCCGTACAAATCAAAGGACGATCCCTTGTAAACAGGAGTTCGTAATACACTCAGGATTAAGACTAAGTCACCCAGGTCATTCTAATGAAATAGAAATCCAACTAGTTAACAGAGTTACATCTAGTGATTACTATTTCGTGGTCCAGTCTTATGCAAACTTATTACATAGGATACCTTCACTCGCATGTCGCATACATGAACACATTGGATCAATGTGTTTGTCAAATACATAGTGAGCCGTATCCATAGTGTTAACAGGATAAGGTACCCAACCTTAACCCTATACTATAAACCCTTTAAGCTGATTTTGAACATCGATCCCTGTATATCTCTACATACTGTTCAAGACTCATCAAACAACTTAGGATGTTAGTTTATTGGATTTAGGTTATTAAGACAAAACTAATAATATAATCAATAACACTTATTGAAATTATAATAATAAGACACTTTATTAATAACGATCAATTGATTATATTTACTATCTACGAGTTTTAGAACATAAAACCCAACAGATAGTTCAACAAATCTCAACAAATATCCCTCTTGAACTGTATTATGCTTAAAGCAAGGTATTTACTCAACTTTATTTAAATCCACCACATTGAGTAGATTTAAACATTGTTCAAACTTAGATTTCGGTAGGGCTTTTGTTAGGAAATCAGCAGCATTCTCTTCAGTTTTAACTTTTAGGATTTTCACCACTCCCTTTTCAATGATATCCCGAACAAAGTGTAATTTCACAGCTATATGTTTAGTTCTATCATGGTATTGCTGATTCTTTGTGAGGTGAATTGCACTCTGGTTGTCACACATTAGCTCTATAGCTTCTTGTTTGTAGCCTAGTTCTGAGACTATTCTCCTTAGCCACATAGCTTTCTTCACAGCTTCAGAAACAACTATAAATTATGCTTCAGTAGTTGATAAGGCAACTACTGATTGTAAATTTGATTTTCAACTGATAAGATTTTCTCCCAAAGTGAAGGCAACGCCAGTTAATGATCTTCTTTTATCAGGATCTCCAGCAAAATCAGTATCCATAAAGCCTCTTACTCGTAGTTTAGAATCATTAGGAGATTTATAAAGCAACCCCCTATTTTCAGTTCCAACTAGATACCGAAAAACCCATTTAGTTGCCTCCCAATGAATCTTGCCTGAGTTTCCCATATACCGACTGACAAGACTTGAACTGTGAGCTAGATCTGGCCTAGTACAGACCATTAGATACATTAGGCTACCTGTAGCATTAGAGTACGGTACATAGCTCATTGCTTGTCTGTCAGTTGGATCTTTAGGTGAATCTCTTGCTGATATTTTAATGTGTTGTGCTAAAGGTGTAGAAACTACCTTTGAGTTGGCCAAGTTGAATCTACAAAGTACCTTGTTAGTGTAGGTCTTCTGAGTTAGAGATAACTCATTGTTATTTCTATCTCTCAAGATTTCAATTCCTAGGATTTTCTTAGCTGCCCCTAGGTCCTTCATATTAAATTCAACAGTGAGTTGAGCTTTGATTTAACTCATTGTTATTTCTATCTCTCAAGATTTCAATTCCTAGGATTTTCTTAGCTGCCCCTAGGTCCTTCATATCAAATTCAACACTGAGTTGAGCTTTGATTTCTTTTAACTTGATTGGGTCTCTCCCTGCTAGTAACATATCATCAACATAAAGTAAAAGATAGATGTAATCACCTTCAGTGAGCTTTTATTAGTAGACACATGAGTCATATAAACTTCTAATAAATTCTATCAGGCTGATATAGTCATCAAAACGTTTGTACCAACATCTTGGAGACTGTTTTAGGCCATATAAAGACGTATTTAGTTTACACACCAACTCCATTTTGCCTTTTACTTCAAAACCCTTAGGCTGCTCCATTAAAATTTCTTCCTCTAAGCTTCCACGTAGGAAAGCAGTAATAACATCTATCTATTCCAGCTCAAGATTTTCACATGCTACAATAGTCAGTAGGATTCTTATAGAAGTGTGCTTCACAACAGGGGAAAAAATCTCATTATAGTCTACACCCTCCTTTTGCTCGAAGCCTTTAGCTACTAGTCTTGCCTTAAATTTTACTTTGTCATTCAAATAACCAATCATCTTCTTTTTGAAGACCCATTTACAAGGAATGATACTTTTTCCATGTGGCGTTTCTACTAGTTCCCAAGTATCATTCTTGTAGAGTGAATTAAGTTCATCATTCATGGCTTCTTTCCACTGATTGTTGTGTCTACTGCATAGAGCATCTTTATAACTGTAAGGCTCATCTTCTATAGTCTCTATAGAGGAGTTAGCTATGCAATCTGCTCTTGCAAATCTAGAAGGAGGCCTAATGGTTTTTCTCCCTCTATCTCTTGTTAAACTATAATTTGTCAAGTCTTCTGCATTTTCTTCTTCCTCTTCTTCTTGAGGATGAAAGCTAGGAAAAGCTTTTGTTGGAAGTTGATCACTGCTGCTAGGGTTTGAGTCTTTCAAATTTGAATGAATCTCTACTTGGTGGCTGGTAGAAGGTTCATTCAAATTATGTTCAGCAGAAGGTATTACTTTGATAGAATCCATATAGATTTCATTCTCCTTGAAAATAACATCTCTGCTTATTAGGCCTCTTTCTTTAGAGAAATCCTAGAGCTTGTAGCCTTTGACACCATCAGGGTAGCCAATAAACATATATTTAAGAGCTCTTGGTTCAATCTTGCTTTGTTTGATGTAGACATATGTTGTACACCCAAAAGGTTTTAGATTAGAGAGCTTAAGGGTAGCTTCAGTCCATCTTTTTTCAGGAGTCTTCATGTCTATAGAAACACATGGGCTTCTACTCATTGTTTAGGTGGCAGTAGCTAAAGCTTCAGCCCAAAAATTTTATGAGATTCTTGCCTCTGAAATCATACATCTCACTCTTTCCATCAATGTTCTATTCATCATCTCGGCAACTCCATTCTGTTGAGGGGTGTAAGCAACTGTTCTGTGCCTTGATATATCAAACTCATTACAAAGAAAGTTAAAATTATTACTAAGAAATTCTAGGCCATTATCAGTTCTTAAGTATTTAATTTTCCTTTCAATTTGATTTTCTACTTTAACTTTCCAATTTTTAAAGCATTCAAAAGCTTGATCTTTAGATTTTAGAGGATAAGTCCATACTTTTCTTGAAAAATCATCTATAAGAGATAAAAAGTACCTTGATCCTCCCCAAGAATTAGTTCTAGCTGGTCCACAAAGATCACCATGTACATAGTCTAAGGTGACTTTTGAGTGATGTTCTCCTTTAGAGAATTTCAGCCTCTTAGACTTGCTAAAGATGCAGTCTTCACAAAAGCCAAGGTTTTTTACTCCTCTAGCTTGAATCAGCCCTTGTTTTTGTAGTTCAGTAAGCCCTTTTTCACTGATATGTGAAAGTCTTCGATGCCATAGTTCTAATTTATTTCCTTTCTCAGTTTCTGAAATTAGAGCATACTTGGGTTTGATCACATTTTTCACAGTATACAAGCCTTCCACCTTTCTTGAATTAAGAATTACTTTTCCTTGTCTTTCCACCTTCATGAAGCCTCTTTCAATATAAATGAAGCAACCTAGGTCATCAAGCATACCTAAAGAGATAAGGTTTCTCTTTAGTTTTGGAACATGTCTTACCCCTTTAAGGAGAACCTCCCTGTTGTTAGATAACTTCAACAACACTGAGCCTATACCAATAATCTCACAGTCTTGATTATTTCCCATGTAAACTGAGTCTCCCTCTTGTGATTTGTAGTCAACAAACCAATTTTTCTTAGAGGTTATATGATAGGGTACATCCTGAGTCTAAGACCCAGTCTTCCTCCTCAGTTTCAATTTCCATGGCCTTCTTATTGGTGGCTGCTAACACCTAATTAAATGTATTCAAAAGCTTCATTACCAACAGGCCCGTGATTACTTCCATGTTCTCTTCCTCTTCTTTGATCTTCTCTTTGATAATTTCTGTTTCGATTGAAGTCTTCTCTGCCATAAGGTCTATATCTTCTGTTTTCATCTCTTATGAAGTTCTTTCCCCTGTCAGGACAATTTTTTTAAAATGTCCTTTGTGACATATGAAACATTTCAGTGCTGGTTTATCTCTGCTTGATCTTTGATTTTTATTGCTGTTTTTTCTAAAAGAATTTTTTCCCTTTGAGAATAGGGACTCTGCTGCATTTGAAGTCTTGTTTTCTGTCTTTAATTCCAGTTCCTTACTTTTAAGTGCTGTAATAACTGAATTCACTGTGATTGTCTCTCTACCATACTTCAGGGTTGTCTTCACTTCTTTGTACGTGTCATGGATCGAATTAATGAGAATAGCAGCTTCAATTTCTGCTCCCAATTTCTCCCCAATTTGATTAAGAGCATTGGTAAGTTTCTTGAACTCATCTAAATTTTCATCAAGATTTTTGTTCTGGTTTATTTTAAATGAAAATAACTTCTCTCTTATGAACATCTTATTTAGTAGATCTTTCTTTTCATACAGTGACTTCAATTTCTCCCAAGTAGCAAAAGCAGTGGTTTCTTCAATTACCTATCTTAGAACATTATCAGTAATATTCATAACAAGTGTACCGTAAGCTACCTCTTCCAATATTTCTCTTTCTAATTTGGTCAAGGTTGCAGGGAGTTCTTTAGGGTCTTCTAAAGCTTTCAAGGCCTTTTGTGAACCCAAGATTATAGTAATTCTTTTTGTCCACAAGGTAAAGTCTCCATTCCCATCAAATTTTTTAATTTCAAACTTCATAGTAGTCATTTTCTTTCTTTCCTTCTTATAGCTATGATACCAGTTCTTGGAAAAGAAAATTTCTCTTACTTTGTAAAAGGAATCTTGAGAGGCAAGTGTAAAAGTGAGAAAATTATATTTTTACCCTTTAGTTTTCTCTCTCCTTTAAACTCATTTGCAAGCTGTCAAATTTCTTTTTCTTTCATTGTATTTCTTTTCTTTCTTTTGCATGTTTCACCGAGAGAGAAAGGAAGAAAGAAAATAGGGTTTCAAAAGGAGGTTTCTTGATGGAAGGTGAAGAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGGTAAAAATCATTTTATTCAACATTCTTTCTTAAAAATAGATTCAAAACAAAAATGAACTTATTTTCATACTACAACTCCTTGTATTTATTCTGTAAGTTTTCTTCTTAAGGCTACCAGACTTTGATTTGTTATTTTGTTGAATATAACTTCCTTTTCTAACAAAATTAGTTGTAACTGATTTGATTCTTTTCTTTAGCAAGTGTAGAAAAGAAGTAGAGGCCCTCTGCCCTCTTGCAGAAGATAGTTCAACAAATCTCAACAAGAACAAAGAGCCATCATTGAAGTAGTGAACTATATATATATAAACTTTAAATTTTCTGACCATATGTTAGCTTAGGGTTCACCAAGCGAAGCTTATCGACAACTTCCAACACTGTGTTGAGGAAAGAAATAGAACCAATATATCCTGCAAAATCCATAGGTACCATATTACAACAAATCTCACATTAGCTGAAAAATAAGAATAGCCAATTTTACAGTATGCAAATTACTGCAGGAGCTTTATACGTAATGCTGGCAATACTTTAGCATAGTTCTCCTTTTCTAGAAGACATTTATTCTTTTCTGCCCGCTATTATGTAGCAACATGCAATTCATAGGTAAAAGCCTCATATTGTAAAGTCACCAAATTATACTCCACACCAAAAGTCACTTAAAAAACTAAAGTACCTGTTAACAAATGAGGGTAGTACAACAATTCATTTTCTTCAAGGCCTTCAATTAAGTCCCATAGTTGTCCTCCATTAAAAACTTGGCCCTTAAATGTCGGATACCCTGTTTTATGTTCAAAAGGAATCATAATCCAATTTCAGTAACACAACAAAATCAAACCAGAACCTATGCATAATGACATAAGGCACCGCACCGTATATAATTAAGCCTTAGAGTTCTAAGACTATTTGAATGAACAAATAGAATCATCTTGCCTGCGTGGTTTGAGAACTGCACGGAATTTATTGGATCTAAATCATAGCCCAATAGTTGGAGAGGGAGAACAGCTGATTTATTCCCAACGTATCCCTACGGCAGCAGACAATAGAACAATCCATTGAAGTAAAACTAATAGTACGGAAATAAAGCCAATCAAGAACAATATAAGAACAAACAGTCCACAGAAATACACAAAGCACAAAAGTAACATCAGAAATTATCAAGATAGTAAATATAAAGTCAAACCTCCCACAATTCAAACACAATCTTATAACAAAAACACCAAGTCTAAGTATCTAACAATACAAATTGCAACAGAACTGAAGGAAACTCCTATAGAAGCCTAATGAAAGCAACAAAAACAAAGTGAATATGGAGTTTGAAATGAAATTCTACCAAAATAACCGGAACCGTAGTAAAGTATTGAACAAACCTGAACAGTGTCGGACTGAATACTGAGAACTCAACCAGTGGCGGACGGGAGAGCTAAGGAGAGGATTGGCGGCAACGTTTAGTATTACAGAAAGCCTGAAGAAGTGGAGATTATAGAAATCAACAAAATGGAATGCGTCAAAGAAGAGATTGGTGGAGGAAAGTGAGAGTTGAGAGAATTTTTTTGAGGAAAAATGGAAGAAACTGAAAACTGTGGAAGTTTTAATAATGTAGAAGAAGAAGAAGAAGAAGCAACGATGAAGGGGTAAGGAAGTGAAAACTGATCGTATGTGAAGACAAAGAAATTATGTAGGAGATTTGGAAGAGATTGGATGAATTACCATATCTAGAGAAGAGTAATCATACTATTGAAGGTTTCCAATTCATTAATACCTTTCAATCATCAACCTGAAAATGAGCAGAACTTAGAGAGATTTGAGAAAGCACTACTAGAAATTTGGGTTTTAATGACGCAAAGTTTATGTCGTAAAGAGTTTCAACGACACAATTTTCGCGTCTTTGAAGCCACTGTCAAGAAAGGCTCTTTAACGGCACTTTGGAAAATGTGTCGTTAAATATGATTAGATGACACCAAAATTGTGTCATTAATACCTTTATCTTGATGCAATAAATATGTCACTGTCATCTATAACTCGACACTAATATATTATCATCAATACCCTTACATTGACGCAAATCAGGTATCACCGATATCTATACCTCGACACTAATATACTGTCATTAATACTCTTACATTGACGCTTTAATTGTGCCACCGTTATCTATACCTTGACACAAATATATTGTGATTAATACACTTACATTGACGCTTTAAATGTGTCACCGTTGTCTATCACGCAACACAAAAATATGGTCATTGATAACTTTATATTGACGCTTTAAATGTGTCACCATTATCTATTACTCGACACTAATATATTGTCGTTGTAAATGTGTCGTTAAAAATTTCGCATTTGTTATTTTTAACGACACATTTTACTTCCACCCTACTCTTTTCTTATTTTTAACGACATAATATTTTGATTACTAGTGTCGTTAAAACCCAAAATTTGTACTAGTGAAGAAAAAAATTAGGAAACATTTCCAGCTTCATTGCCTAATCATTCAATCAAGTTTCTAACCTAGAAAGAAAGATGAAAAGATGAGATGAGATGAAGAAATCGTCGACGTCATCGTCATTAACAGGAAGTGATGTCGTTGTCAGTTGAACGTCAATGAGGAAAGACTAACCTTGAATCATTAACCTAGAAGCGACGTCATTGTTAGTTGAATGGAAGTTGTGAGTGGTCGGCTGATAAAATGATGAGATAAGATGAAGAAATCGATTGAATAATGTGAGGGATGAAGAAGTCGATTGAACTGTGAAGGTTGGCTATCGCGTGCAAAGAAAAGGAAATTGAAGTGACGAAAAGAAAAAAGTTTTGGGCTAAATTGGTAAAATATTAATTAATTACTTTAAGTGGTAAAATATTTACACTCTATAGAATAATTCCAAAAACGAAAAAAGCCAAGAGGCTCACCATGTAAAATACAAAAATGTCCCGTCAACCACACCGTCAATAACGTGTGCCTAATATATTTGTGATTGTTTAGATTTGATTATTGTTTGATACGCGATCATTTAGATATGGCTACAATTTATACGCGATGGTTTAGATATGATTCAATATATACGCGATCGTTCAGATATGGTTCAATATATACGCGATCATTTAGATATGGCTATAATTTATACACGATCGTATAGATATGGCTACAACATTTATACGCGATCGTTTAGATATGACTACAATTTATACGGGATCGTTTAGATATGACTACAATTTATTTTTTTAATTTCATCATTGAATTTTGTTACACAATGGTTTAGATTTGGGGACCCAAATCTAAATAATTTAAAAAAAAAATTGGTACACGATTTTTTTAATTCTTATGGTACACAATCATTTAGATTTATTTACACGATCGTTTAGATTTATTTACACGATCGTTTAGATTTATTTACACGATTGTTTACTTTTTTAAATGATTGTTTACATTTGGCTACTCTAATCTAAATGATTTTTTTTTTCAAGATTCTTTATACACAATCTTTTATTTTTTTACACAATCGTTTACAATTGGCTACTCCAATCTAAATGATTTTTTTTCAAGATTCTTTATACACGATATTTTAGATTTTTCTATTTTGTTGTACATAGTCTTATACACAATCATTTAGATTTGGTTACCCAAATGTAAATGCGTAAGAACAAAAAAAGTAAAGAAGAAAGACGATAGAAAGAAATCGCAGCTAAAAAAAGAAGAGGAAAAGTAGAAAGACGATGGAAAGAAATCAAAGCAAAAAAAACGAAGAGGAAAAGAAGAAAAATGATGGAAAGATTAAATGGCATAAATAAAGAATTGAAAAACAAGAAAGATGATGGAAATAAATCACAGAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATAGTTTACAGGAGGAAGACGAATCGCAAGGAAGAAAAGAAAGATGGAAGGACAAACCTAGAATATTTAAAAAATGGGACCTTATGGACTTTGTTACACGGACCGTAAATAGTTTACAGTCTTGTTACATTTATGTAAGTTTCCCATTAATTAATTTATTTATTTTATTTTATTCCAATAGCTCAATTTAAAATAAGCTATCTTGGAGGGCTATTAAAAGTCCAATATGTTGTAGTGACCTATAGTTTTAATATGTATCATATAGATATTAAATTTAACCTATAGTTTTAATATGAATATAATTCATATTAAATTAATATTTGAACTCATTCAAATATTTTATTCTCTCATAAATTAATTTTGAAACATATCCAAAATTAAATTCATATAATAAAGTTTAATTAAAATATAAATTTTATTTTATAATGTATCACCACACATTATATTAATTCCCATATTAAATTAATATTTGAACTCATTCAAATATTTTATTCTCTCATAAATTAATTTTGAAACATATCCAAAATTAAATTCATATAATAAAGTTTAATTAAAATATAAATTTTATTTTATAATGTATCACCACACATTATATTAATTTCCAAAGTAAATTTGAACATTTCAAATTACAAGTAATACAATTAAATCTCATTAACCTTTAAGAGCTAGGAAGGGGGCCTCACAAATCAAAAGCTACAACGATATGAAATTAATTAGCTAAACTCATTAACCACATTAATCAATATCCATTAACTGTGTGTCCACTAAAGACTCACAATTGAACTCTTCTCACTGTAGATATATTTCTGCGTTCGATGATATAGACCAATACCAGTAAGCTAGTCCTTTACAAGTGTTCGTAACACCAGTTGGGTTAAATTACCATTTTATCCTTCGGTTACTTCTAGTCATTAAGTACCAGTGCTCCTCTAATGAACAACCTATTTATAGTCCAACCACTAAACAAAAACCTCTCTCGTGCGATAGAAAGAGTAGGACCCTTTGTTCAAGTCCCGAAAACACCATTTAAGGGGACACTTATCTAATTATCCAGTCGAGAAGGAGTGAATTCCATCTTGTGTGATTACATTCCTAGCTCCCCATTCGGTCTTGTCCCCAAAATGATAAGCATATTGAGGCGAAAATTTGGCCACTATCACCCGTACAAATCAAAGGACAATCCCTTGTAAATAGGAGTTCATAATACACTCAGGATTAATACTGAGTTATCTAGGTCATCCTAATGAAATAGAAACCTAACTAGTTAATGGAGTTACATCTAGTGGTTACTATTTCGTGGTCTGATTTTATGCAAACTCATTACATATGATACCCTCACTCGTATGTCACCTACACGAACGCATTGGATAATTACGTTTGTATCAAATACAAAGTGAGTCGTATCCATAGTGTTACCAGGATAAGGTACCCAGCCTTATCCCTATACTGTAGGCCTTTTTAAGCTGTATCTTGAACATTAATCCTTGTATGTCTCTACATACTGTTCAAGACTCATCTAACAACTTAGGATTTTAGTTTATTAGATTTAGGTTATTAAGACAACACTAATAATATAATCAATAACACTTATTGAAATTATAACAATAACACTTTATTAATAACAGTCAATGAATTATATTTACTATCTACGAGTTTTAGGACATAAAACCCAATGCTCCTTATTTTCTACACCTCGGTCGCGCAGCAATCCTAACTTAGAAAACAACCTTCAGAGCTTCCTTTCCCTGCCTCAGTTCTTCAACTCTTTTACTCCTCGGGTTTGGCCTCACCAACCTAAGTGTGCACTCGCCATCCTGCTGAACTAAGTTTTGGGAGTTAAAGAGCGATGTGCTTACGAATTGGATCTTTAAAAGCAAGGTAGGATGACACGCCCCTCGCACCGCACAAGTTTACATAACAACCTTGTCTTTCCTCCTTTACTTGACTTTTACGCTAGAGATCCATCTTTTACTTGGCTTCGATCCATGCCTGAAAACCTGGGGAAGGGAAACTTAAAATGTAAGTCAAACGAACTTAGTGAGCGATAAGTTTGCAAATACCTTTTGGGGAATACACAACTTCAGATGTAGCAACAACAAGGTCAATTCACAAAACATAAGGTTCTCATCAAATCAAATCACAATCAATCAAACCACAATCGCAACAAGCACGATAAGTTCCACGTGCTTAAGACATCACACAATCCAAACTCATCATCTGGACCTAGGATTTTTCCCTCGCCTGGACCTGGGATTCACATTTAACCAGTGTCACACGAGTTACCTAGGATTTCCACATGTGTATCGCCATAATCTTTTCTCAAATCTGTGATTCACATTAAACCAGTGTCACATGCATCATTCCTCGCCTAGATCTAGGATTCACATTCCGCTAGCATCTAGCGTCAATAACACATCACTGCTTGCCCGACCTGGGATTCTTCCCTCCCCTGGACCTGGGATTCACTTTCAACCAATGTCGTGCAAGTTACCTAGGATTTCCACCAGCGTCTTGTTATAGGTCTCATCTTTCTCACATCATACAACCATTACAATCAGCAGACAAAAAGGTTAGCTTTCCAGCTTACTTTTCGTTCATAAAATCACAGTAGTAAATATCATGCAATAAGCATCAACAAAAGAATACTTTCAAACGATCATCAATGAGTACATCTTTCATTTATCAAGATCATAAACACAATATTAATTATTTATGGAAATCATTTATAAGACATTTCTTCCACTGATGAAAGATTTACAAATATTTTGCTTATGAAAGTTACTAAAAACAAACATTTATTACAAAGATCTTTCACAAAGATACTTGTTTTATTTAAGGAGAATCACTCATGAAAATACTTAGCTTCAACTTCCTCCTTCTCTGCTTTCGGCTTTCTCTTCTCACCTAACGGTTCCCTCGACCAGTCATTCTACACTAAGAGCTTTCTCTTGTAATCTATCAAAGTGTTTAACATTTTTTAAAACTTCTTTTTCCTTCGGTCTTGGGCCCTCCTTTCACACTCAAGGGTCACTTCTATGCTTTACACGTGCCACTTTATAAATTTGTCGTGTCATGCAGCTAATCCAAACTCAACACGTCGATCAAATATCAACGATGATTAGGCGTTCCCTTGAGACGCCAACCATATCTCCTTAGAAAGCCAAACTCTTTAATCGCCTGACTCTTTCTATCACCCCAGGAAGCAACAGACATATACTTCCCACAGCGAGTTGTTTAGTCATTTTAATAGGACACCTACTTCTTCACTGCACTCTCTTAGGCTAGGTACTTCTTCCCGCATTACCACACTAAACGCCTAGCCCTTAGCATCCAATGCATGCTTCTTCCTTGCCAGCTATTCTTATCACGTTGCTTACCTTACGCAATAGAACTTAGACTCAAACATTTCTCTTCACTTCACCTTTTATCCTCCCGCAACCTTTCTCGTAGGATGTCTCATGCTTATATTTATCCGAAATAACTTTCTAGTAAGGCTTCCTTTCAATAGGACTTTCTTTTTTTGAATTAGGGCCTTGCATAATATTGCTTAAATTTTCCAATTTTCGACAAACAAGTTGAATAAGCTTGAGTTGTACGTAAGAAAAAGATAACCAGTGTCACACCCCCTCTCGGACTACCTGCTACCTTAGACCGAAAGATGGCATGAAGCCGATGAACAACGCTTTTCTGTACCTGTATCTGTCGACTCTGCTTAAAACTTTCATGTGATGAACTTGCCAATCTAGTATATAAACTATTAAGATATGGCGTTGAAGCGGAGCCGGTCGTCGGACTCCTCCAAGCCGCGAAGCATTTACGTCGTCGAACGCCAAAGACCGATGTTCGTGGTCGCCCCGGTTCCAAGCTGACCCGACCCGAGATCCGCTTCCAGTTCGAGCCGCGAGCCACAAGCAGATCCGAGTCGAGCCGCGAGCCACAAGCCGAGCCGAGCCGAGCCGTAAGCTGATTTGAGCCGAGCCGCGAGCCGAGTCAAGCCGAAGACCGAGCCGAGCCGCGAGCCACAAGCCGAGCCGAGCCGAGCCGTAAGCTGACTTGAGCCGAGCTGTGAGCCGAGCCGTAAGCCGAGTTGAGCCGAGCCGAGCCGTGAGCCGAGCCGTGAGCCAAGGCCGAGCCAAGCCAAGCCGAGGGTGAGCCAAGCCGAGCCGAGCCACCTAAGCCATATTTCCCTCCCTTCACTTCGGGCCACGGTGAGTCTTCGGTAAGGATTGTTTTCGATGAATTCCTTAATGTTGCTACATCCGATTCGAGTTTGAATATTGGAATAAGATATGGTCCTACCTTTCATCCCTTGAAGGTATTAAGGAGTTGACGTATAAGTTCTCGGGTTCCGCGGCAGGCTTGTTTGGAGATAGCTTTCCTTTCCTTGGGTAAGTCAACGGATGTTGCTTAGGACCATTTAAAAAGACTCCTACTAGTATCATCGATTAAAACCTTCGTGTTTTCGTTTAGGTGGATTCGTTGAGCGTGGACTCGATTGAGGGGCATAACCGAGAATTAGGTAAGGGTTTTCCTACTACTGGACCTCGGATCGAGGCTGGAAACGTAGTAATCCACAGGGGATTACACGTTAGTAACTATACTGAATAAAAGTATGTGTGTTTGACTTTTAAGTATTTTTGCTATACTCTTGTCTGATGTAAAGGTAACGCGACCGCTAGTTGTAGCTTGTGTGCTATCGGGTGTAAGGAGTTGCTTTCGGATAGACCCCGATGCTGGATGTTCGGTATAGGGTGGTTATGTTAATGGGCTATGTTGTAGATTGGAATTTTATGTCGATGGACCCTGAAGTTTACGATTAGGTACGTGGTAGTCATTGGCCTAGACATTTATCACGGAGTTTGGTCGGGGAAGGACGGTGAGTCCGATCTTGATTGATTAGTTGACTGGGTCTAGGGGTTGTTAATGGTGTGCGAATTGGAAATGCGTATAGCAACTGCGGGTGTAGTTGTTTAAACCTACTATCTGACTGGCAAAGCCTATGGCGGAGCTGTAATATGAATGTTGTTGAGGTATGACTGTTGTAGACGGTTTAGTATGGACTGAGAGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATATGTGCATCCTTCGGAAGCACTAGACTGATACGTGCATCCTTCGGGAGCACTAGACTGATCTGTGCATCCTTCGGGAGCACTAGACTGATGTGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCTAAATAGAAAGTTAACTGTTGTTCCCTAACGGGCCCAGTAGTGGGTCTCTTACTGGGTATGTTTATACTCACCCTTTACTCTTCTTAAACTTTTCAGGTAAGGGCACAGCGAGGGGCAGACCCACGAGAGGCAGGAAGGACGCGTAAAGGCCATATGGACGCGTCTGGTTTTCTTATTGCTTCCGCTGATGTATTTTGTTAGAATATTTGGTTTGTGATTTTGAACTGATGACCTGAGTTTTTATTTGAAACTTTTGTGACTGTGATTTAAAATAGG

mRNA sequence

ATGGAAGGTGAAGAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGGTAAGGGCACAGCGAGGGGCAGACCCACGAGAGGCAGGAAGGACGCGTAAAGGCCATATGGACGCGTCTGGTTTTCTTATTGCTTCCGCTGATGTATTTTGTTAGAATATTTGGTTTGTGATTTTGAACTGATGACCTGAGTTTTTATTTGAAACTTTTGTGACTGTGATTTAAAATAGG

Coding sequence (CDS)

ATGGAAGGTGAAGAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGGTAAGGGCACAGCGAGGGGCAGACCCACGAGAGGCAGGAAGGACGCGTAAAGGCCATATGGACGCGTCTGGTTTTCTTATTGCTTCCGCTGATGTATTTTGTTAG

Protein sequence

MEGEEMRKVNKMMFIVVQHIAYIHSSKMRKVNKMMFIVVQHIAYIHSSKVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
Homology
[Close]
BLAST of Cmc05g0131031 vs. NCBI nr
Match: KAA0039650.1 (hypothetical protein E6C27_scaffold744G001360 [Cucumis melo var. makuwa] >TYJ95534.1 hypothetical protein E5676_scaffold767G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 49  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
           +VRAQRGADPREAGRTRKGHMDASGFLIASADVFC
Sbjct: 275 RVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 309

[Close]
BLAST of Cmc05g0131031 vs. NCBI nr
Match: KAA0062727.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 2.3e-08
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 15  IVVQHIAYIHSSKMRKVNKMMFIVV----QHIAYIHSSKVRAQRGADPREAGRTRKGHMD 74
           I+ +HI    S K+  VNKM + V+    Q++ Y+  +KVRAQR AD REAGRTR+GHMD
Sbjct: 375 ILREHIELSRSMKVNPVNKMKYQVIDGTSQYVIYL-PTKVRAQRRADRREAGRTREGHMD 434

Query: 75  ASGFLIASA 80
           ASGFLIASA
Sbjct: 435 ASGFLIASA 442

[Close]
BLAST of Cmc05g0131031 vs. NCBI nr
Match: TYK22067.1 (hypothetical protein E5676_scaffold318G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 3.9e-08
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 49 KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
          +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Sbjct: 33 RVRAQRGADRREAGRTREGHMDASGFLIASADVFC 67

[Close]
BLAST of Cmc05g0131031 vs. NCBI nr
Match: KAA0062520.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 3.9e-08
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 49   KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
            +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Sbjct: 1934 RVRAQRGADRREAGRTREGHMDASGFLIASADVFC 1968

[Close]
BLAST of Cmc05g0131031 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 3.9e-08
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 49   KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
            +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Sbjct: 1923 RVRAQRGADRREAGRTREGHMDASGFLIASADVFC 1957

[Close]
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match: A0A5D3B9C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00250 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-10
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 49  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
           +VRAQRGADPREAGRTRKGHMDASGFLIASADVFC
Sbjct: 275 RVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 309

[Close]
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match: A0A5A7V6U1 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00560 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0 

Query: 15  IVVQHIAYIHSSKMRKVNKMMFIVV----QHIAYIHSSKVRAQRGADPREAGRTRKGHMD 74
           I+ +HI    S K+  VNKM + V+    Q++ Y+  +KVRAQR AD REAGRTR+GHMD
Sbjct: 375 ILREHIELSRSMKVNPVNKMKYQVIDGTSQYVIYL-PTKVRAQRRADRREAGRTREGHMD 434

Query: 75  ASGFLIASA 80
           ASGFLIASA
Sbjct: 435 ASGFLIASA 442

[Close]
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 49   KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
            +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Sbjct: 1923 RVRAQRGADRREAGRTREGHMDASGFLIASADVFC 1957

[Close]
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match: A0A5A7V0H5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001000 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 49  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
           +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Sbjct: 217 RVRAQRGADRREAGRTREGHMDASGFLIASADVFC 251

[Close]
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match: A0A5A7V5L6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7126G00110 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 0 

Query: 49   KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC 84
            +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Sbjct: 1934 RVRAQRGADRREAGRTREGHMDASGFLIASADVFC 1968

The following BLAST results are available for this feature:
BLAST of Cmc05g0131031 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039650.11.2e-0997.14hypothetical protein E6C27_scaffold744G001360 [Cucumis melo var. makuwa] >TYJ955... [more]
KAA0062727.12.3e-0857.97protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa][more]
TYK22067.13.9e-0891.43hypothetical protein E5676_scaffold318G00490 [Cucumis melo var. makuwa][more]
KAA0062520.13.9e-0891.43pol protein [Cucumis melo var. makuwa][more]
KAA0031931.13.9e-0891.43pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc05g0131031 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3B9C65.9e-1097.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6U11.1e-0857.97Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5A7SQU81.9e-0891.43Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13... [more]
A0A5A7V0H51.9e-0891.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V5L61.9e-0891.43Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold71... [more]
BLAST of Cmc05g0131031 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc05g0131031.1Cmc05g0131031.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0000428 DNA-directed RNA polymerase complex
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding