Cmc05g0130601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0130601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr05: 9176816 .. 9177328 (+)
RNA-Seq Expression	Cmc05g0130601
Synteny	Cmc05g0130601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCCTTACATACATAGAGTTTATTTGTTAAAGGATCAATGTCCTAACACACCTCGAGAAGTTGAGGATATGAGACATATTCCCTATGCTTATGCAGTTGGGAGTTTGATGTATGCAATGTTATGTACTAGGTTTGACATATGCTACTCAAAAGGAATCTTCAATAGGCATCAGCCCAATCTCGGACGCGATCATTGGACTATCATTAATAATATCCTAAAGAATCTTAGGAGAACAAAAAACTACAAGCTCGAGTATGGTACTAAGAATTTGATCCTTACTGGATACACTGATTCTAATTCCCAAAATGATAAAGATGCTAGAAAGTCTACATCGAAATCTGTATTCACTCTAAATGGAAGAGAAGTAGTGTGGAAAAACATAAATAAAACATGTATAGCCGACTCCACAATGGAAGCTGAATGCATTGCTACTTGTGAAGCGACAAGGAAAGCAATATGGCTAAAGAAGCTCTTGATAGATATGGAAGTTGTTCCTAATATGCATTGA

mRNA sequence

ATGTTGCCTTACATACATAGAGTTTATTTGTTAAAGGATCAATGTCCTAACACACCTCGAGAAGTTGAGGATATGAGACATATTCCCTATGCTTATGCAGTTGGGAGTTTGATGTATGCAATGTTATGTACTAGGTTTGACATATGCTACTCAAAAGGAATCTTCAATAGGCATCAGCCCAATCTCGGACGCGATCATTGGACTATCATTAATAATATCCTAAAGAATCTTAGGAGAACAAAAAACTACAAGCTCGAGTATGGTACTAAGAATTTGATCCTTACTGGATACACTGATTCTAATTCCCAAAATGATAAAGATGCTAGAAAGTCTACATCGAAATCTGTATTCACTCTAAATGGAAGAGAAGTAGTGTGGAAAAACATAAATAAAACATGTATAGCCGACTCCACAATGGAAGCTGAATGCATTGCTACTTGTGAAGCGACAAGGAAAGCAATATGGCTAAAGAAGCTCTTGATAGATATGGAAGTTGTTCCTAATATGCATTGA

Coding sequence (CDS)

ATGTTGCCTTACATACATAGAGTTTATTTGTTAAAGGATCAATGTCCTAACACACCTCGAGAAGTTGAGGATATGAGACATATTCCCTATGCTTATGCAGTTGGGAGTTTGATGTATGCAATGTTATGTACTAGGTTTGACATATGCTACTCAAAAGGAATCTTCAATAGGCATCAGCCCAATCTCGGACGCGATCATTGGACTATCATTAATAATATCCTAAAGAATCTTAGGAGAACAAAAAACTACAAGCTCGAGTATGGTACTAAGAATTTGATCCTTACTGGATACACTGATTCTAATTCCCAAAATGATAAAGATGCTAGAAAGTCTACATCGAAATCTGTATTCACTCTAAATGGAAGAGAAGTAGTGTGGAAAAACATAAATAAAACATGTATAGCCGACTCCACAATGGAAGCTGAATGCATTGCTACTTGTGAAGCGACAAGGAAAGCAATATGGCTAAAGAAGCTCTTGATAGATATGGAAGTTGTTCCTAATATGCATTGA

Protein sequence

MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPNLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNGREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH

Homology

[Close]

BLAST of Cmc05g0130601 vs. NCBI nr
Match: KAA0060227.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK21535.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 25  MRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPNLGRDHWTIINNILKNLRRTKNYK 84
           MRHIPYAYAVGSLMYAMLCTRFDICYS GIFNRHQPNLGRDHWTIINNILKNLRRTKNYK
Sbjct: 1   MRHIPYAYAVGSLMYAMLCTRFDICYSIGIFNRHQPNLGRDHWTIINNILKNLRRTKNYK 60

Query: 85  LEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNGREVVWKNINKTCIADSTMEAECI 144
           LEYGTKNLILTGYTDSNSQNDKDARKSTS+SVFTLNGR VVWKNINKTCIADSTMEAE I
Sbjct: 61  LEYGTKNLILTGYTDSNSQNDKDARKSTSESVFTLNGRAVVWKNINKTCIADSTMEAEGI 120

Query: 145 ATCEATRKAIWLKKLLIDMEVVPNMH 171
           ATCEATRKAIWLKKLLIDMEVVPNMH
Sbjct: 121 ATCEATRKAIWLKKLLIDMEVVPNMH 146

[Close]

BLAST of Cmc05g0130601 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 254.2 bits (648), Expect = 7.9e-64
Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 2    LPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPN 61
            LP+ H ++L K+QCP TP+EVEDMR+IPY+ AVGSLMYAMLCTR DICYS GI +R+Q N
Sbjct: 1076 LPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSN 1135

Query: 62   LGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNG 121
             GRDHWT + NILK LRRT+NY L YG K+LILTGYTDS+ Q+DKDARKSTS SVFTLNG
Sbjct: 1136 PGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNG 1195

Query: 122  REVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
              VVW+++ +TCIADSTMEAE +A CEA ++A+WL+K L D+EVVPNMH
Sbjct: 1196 GAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMH 1244

[Close]

BLAST of Cmc05g0130601 vs. NCBI nr
Match: TYK06386.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 4.3e-62
Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQP 60
           +LPY + ++L K+QCP TP+EVEDM +IPYAYAVGSLMYAMLCTR DICYS GI +R+Q 
Sbjct: 127 LLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAYAVGSLMYAMLCTRPDICYSVGIVSRYQS 186

Query: 61  NLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLN 120
           N GRDHWT + NILK LRRTK+Y L YG+K+LIL GYTDS+ Q DKDARKSTS SVFTLN
Sbjct: 187 NPGRDHWTDVKNILKYLRRTKDYMLVYGSKDLILIGYTDSDFQTDKDARKSTSGSVFTLN 246

Query: 121 GREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
           G  VVW++I ++CIADSTME E +A CEA ++A+WLKK L D+E VPNMH
Sbjct: 247 GGAVVWRSIKQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEGVPNMH 296

[Close]

BLAST of Cmc05g0130601 vs. NCBI nr
Match: KAA0067886.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 5.6e-62
Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQP 60
           +LPYI+ ++L K+QCP  P+EVEDM +IPYA AVGSLMYAMLCT  DICYS GI +R+Q 
Sbjct: 180 LLPYIYGIHLSKEQCPKIPQEVEDMSNIPYASAVGSLMYAMLCTGPDICYSVGIVSRYQS 239

Query: 61  NLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLN 120
           N GRDHWT + NILK LRRTK Y L YG+K+LILTGYTDS+ Q DKDARKSTS+SVFTLN
Sbjct: 240 NPGRDHWTTVKNILKYLRRTKGYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLN 299

Query: 121 GREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
           GR VVW++I ++ IADSTMEAE +A CEA ++ +WLKK L D+EVVPNMH
Sbjct: 300 GRAVVWRSIKQSFIADSTMEAEYVAACEAAKEVVWLKKFLTDLEVVPNMH 349

[Close]

BLAST of Cmc05g0130601 vs. NCBI nr
Match: TYK04328.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 5.6e-62
Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQP 60
           +LPYI+ ++L K+QCP  P+EVEDM +IPYA AVGSLMYAMLCT  DICYS GI +R+Q 
Sbjct: 180 LLPYIYGIHLSKEQCPKIPQEVEDMSNIPYASAVGSLMYAMLCTGPDICYSVGIVSRYQS 239

Query: 61  NLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLN 120
           N GRDHWT + NILK LRRTK Y L YG+K+LILTGYTDS+ Q DKDARKSTS+SVFTLN
Sbjct: 240 NPGRDHWTTVKNILKYLRRTKGYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLN 299

Query: 121 GREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
           GR VVW++I ++ IADSTMEAE +A CEA ++ +WLKK L D+EVVPNMH
Sbjct: 300 GRAVVWRSIKQSFIADSTMEAEYVAACEAAKEVVWLKKFLTDLEVVPNMH 349

[Close]

BLAST of Cmc05g0130601 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 67/161 (41.61%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 3    PYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPNL 62
            P    + L K  CP T  E  +M  +PY+ AVGSLMYAM+CTR DI ++ G+ +R   N 
Sbjct: 1084 PLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENP 1143

Query: 63   GRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNGR 122
            G++HW  +  IL+ LR T    L +G  + IL GYTD++   D D RKS++  +FT +G 
Sbjct: 1144 GKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGG 1203

Query: 123  EVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDM 164
             + W++  + C+A ST EAE IA  E  ++ IWLK+ L ++
Sbjct: 1204 AISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQEL 1244

[Close]

BLAST of Cmc05g0130601 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 49/135 (36.30%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 25  MRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPNLGRDHWTIINNILKNLRRTKNYK 84
           M+++PY  AVG++MY M+ TR D+  + G+ ++   +    HW  +  +L+ L+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 85  LEY---GTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNGREVVWKNINKTCIADSTMEA 144
           LE+   GT  L+  GY+D++   D ++R+STS  +F LNG  V W++  +  +A S+ E 
Sbjct: 61  LEFTRAGTAKLV--GYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTED 120

Query: 145 ECIATCEATRKAIWL 157
           E +A  EAT++A+WL
Sbjct: 121 EYMALSEATQEAVWL 133

[Close]

BLAST of Cmc05g0130601 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 29   PYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPNLGRDHWTIINNILKNLRRTKNYKLEYG 88
            P    +G LMY MLCTR D+  +  I +R+      + W  +  +L+ L+ T + KL + 
Sbjct: 1180 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF- 1239

Query: 89   TKNLI----LTGYTDSNSQNDKDARKSTSKSVFTL-NGREVVWKNINKTCIADSTMEAEC 148
             KNL     + GY DS+    +  RKST+  +F + +   + W    +  +A S+ EAE 
Sbjct: 1240 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1299

Query: 149  IATCEATRKAIWLKKLLIDMEV 166
            +A  EA R+A+WLK LL  + +
Sbjct: 1300 MALFEAVREALWLKFLLTSINI 1320

[Close]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL
Match: A0A5D3DDD1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00190 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 25  MRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPNLGRDHWTIINNILKNLRRTKNYK 84
           MRHIPYAYAVGSLMYAMLCTRFDICYS GIFNRHQPNLGRDHWTIINNILKNLRRTKNYK
Sbjct: 1   MRHIPYAYAVGSLMYAMLCTRFDICYSIGIFNRHQPNLGRDHWTIINNILKNLRRTKNYK 60

Query: 85  LEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNGREVVWKNINKTCIADSTMEAECI 144
           LEYGTKNLILTGYTDSNSQNDKDARKSTS+SVFTLNGR VVWKNINKTCIADSTMEAE I
Sbjct: 61  LEYGTKNLILTGYTDSNSQNDKDARKSTSESVFTLNGRAVVWKNINKTCIADSTMEAEGI 120

Query: 145 ATCEATRKAIWLKKLLIDMEVVPNMH 171
           ATCEATRKAIWLKKLLIDMEVVPNMH
Sbjct: 121 ATCEATRKAIWLKKLLIDMEVVPNMH 146

[Close]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.8e-64
Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 2    LPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQPN 61
            LP+ H ++L K+QCP TP+EVEDMR+IPY+ AVGSLMYAMLCTR DICYS GI +R+Q N
Sbjct: 1076 LPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSN 1135

Query: 62   LGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLNG 121
             GRDHWT + NILK LRRT+NY L YG K+LILTGYTDS+ Q+DKDARKSTS SVFTLNG
Sbjct: 1136 PGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNG 1195

Query: 122  REVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
              VVW+++ +TCIADSTMEAE +A CEA ++A+WL+K L D+EVVPNMH
Sbjct: 1196 GAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMH 1244

[Close]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL
Match: A0A5D3C7T2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00810 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQP 60
           +LPY + ++L K+QCP TP+EVEDM +IPYAYAVGSLMYAMLCTR DICYS GI +R+Q 
Sbjct: 127 LLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAYAVGSLMYAMLCTRPDICYSVGIVSRYQS 186

Query: 61  NLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLN 120
           N GRDHWT + NILK LRRTK+Y L YG+K+LIL GYTDS+ Q DKDARKSTS SVFTLN
Sbjct: 187 NPGRDHWTDVKNILKYLRRTKDYMLVYGSKDLILIGYTDSDFQTDKDARKSTSGSVFTLN 246

Query: 121 GREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
           G  VVW++I ++CIADSTME E +A CEA ++A+WLKK L D+E VPNMH
Sbjct: 247 GGAVVWRSIKQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEGVPNMH 296

[Close]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL
Match: A0A5D3BZ86 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00650 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.7e-62
Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQP 60
           +LPYI+ ++L K+QCP  P+EVEDM +IPYA AVGSLMYAMLCT  DICYS GI +R+Q 
Sbjct: 180 LLPYIYGIHLSKEQCPKIPQEVEDMSNIPYASAVGSLMYAMLCTGPDICYSVGIVSRYQS 239

Query: 61  NLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLN 120
           N GRDHWT + NILK LRRTK Y L YG+K+LILTGYTDS+ Q DKDARKSTS+SVFTLN
Sbjct: 240 NPGRDHWTTVKNILKYLRRTKGYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLN 299

Query: 121 GREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
           GR VVW++I ++ IADSTMEAE +A CEA ++ +WLKK L D+EVVPNMH
Sbjct: 300 GRAVVWRSIKQSFIADSTMEAEYVAACEAAKEVVWLKKFLTDLEVVPNMH 349

[Close]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL
Match: A0A5A7VMU7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00400 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.7e-62
Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLPYIHRVYLLKDQCPNTPREVEDMRHIPYAYAVGSLMYAMLCTRFDICYSKGIFNRHQP 60
           +LPYI+ ++L K+QCP  P+EVEDM +IPYA AVGSLMYAMLCT  DICYS GI +R+Q 
Sbjct: 180 LLPYIYGIHLSKEQCPKIPQEVEDMSNIPYASAVGSLMYAMLCTGPDICYSVGIVSRYQS 239

Query: 61  NLGRDHWTIINNILKNLRRTKNYKLEYGTKNLILTGYTDSNSQNDKDARKSTSKSVFTLN 120
           N GRDHWT + NILK LRRTK Y L YG+K+LILTGYTDS+ Q DKDARKSTS+SVFTLN
Sbjct: 240 NPGRDHWTTVKNILKYLRRTKGYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLN 299

Query: 121 GREVVWKNINKTCIADSTMEAECIATCEATRKAIWLKKLLIDMEVVPNMH 171
           GR VVW++I ++ IADSTMEAE +A CEA ++ +WLKK L D+EVVPNMH
Sbjct: 300 GRAVVWRSIKQSFIADSTMEAEYVAACEAAKEVVWLKKFLTDLEVVPNMH 349

The following BLAST results are available for this feature:

BLAST of Cmc05g0130601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060227.1	5.8e-75	97.26	gag/pol protein [Cucumis melo var. makuwa] >TYK21535.1 gag/pol protein [Cucumis ...	[more]
ADJ18449.1	7.9e-64	70.41	gag/pol protein, partial [Bryonia dioica]	[more]
TYK06386.1	4.3e-62	69.41	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0067886.1	5.6e-62	69.41	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK04328.1	5.6e-62	69.41	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0130601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.5e-28	41.61	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	1.5e-17	36.30	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P04146	1.6e-11	33.10	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDD1	2.8e-75	97.26	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G0019...	[more]
E2GK51	3.8e-64	70.41	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5D3C7T2	2.1e-62	69.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G0081...	[more]
A0A5D3BZ86	2.7e-62	69.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G0065...	[more]
A0A5A7VMU7	2.7e-62	69.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G0040...	[more]

BLAST of Cmc05g0130601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 95..170 e-value: 1.91679E-20 score: 80.2049

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0130601.1	Cmc05g0130601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding