Cmc05g0129551 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0129551
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease H
Location	CMiso1.1chr05: 7578159 .. 7579442 (-)
RNA-Seq Expression	Cmc05g0129551
Synteny	Cmc05g0129551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTACTATACTACATGGCTTATTTCAAAAATGGATCCTATAAAATACATTTTTGAAAAGCCATCCTTATCAGGAAGGATAGCTAAGTGGCAAGTGTTGTTATCAGAGTTTGATATCGTTTACATTACTAGAAAGGCCATAAAGGGTAGTGTGATTGCTGATTGCTTAGCGGAGTTACCAATTGAGGACTATGAGCCCATGAAGTTCGATTTTCCAGATGAAGATATCATGGCATTAGTAAATACATCATCGAATACATGGACAATGATGTTTGATGGAGCCACGAACGAAATAGGGCACGGTGTGGGAGCAATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGAGAGTGCGAATGGCATACGAGATGAAAGTAAAAAAATTACGAGTCCTTGGGGACTCCCTGTTGGGAGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTATAACGATTATATTCGAACAATAGCGCAAACTTTTGATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTCTTTCTGCCATGTTTAATGTAGCTTACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAACGGGAACCTGACGGTAAACCTTGGTATCATGATATTAAGCACTACATCGCATATCGGGAGTATCCATCAGGGGTATCAGAAAATAGTAAGCGCATCGTTAGGAGGCTAGCCATGAAGTTCTTTCTAAGTGGTGAAGTATTATACAAAAGAAATTACGATATGACTCTACTGCGATGCGTCGATGCTTTGAAAGCCAAAAAAAGTTTGGAAGAAATTCATGAAGGAGTGTGTGGGACGCATGCAAATGGACACATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAATGTCAAATATACGCAGATAAAACGCATGCTCCAGCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGTTTGGATGTAATTGGACCCATTGAGCCAAAGGCATCAAATGGTCATCGATTCATTTTGGTAGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTATCAAGTTCATATGA

mRNA sequence

ATGTTGTACTATACTACATGGCTTATTTCAAAAATGGATCCTATAAAATACATTTTTGAAAAGCCATCCTTATCAGGAAGGATAGCTAAGTGGCAAGTGTTGTTATCAGAGTTTGATATCGTTTACATTACTAGAAAGGCCATAAAGGGTAGTGTGATTGCTGATTGCTTAGCGGAGTTACCAATTGAGGACTATGAGCCCATGAAGTTCGATTTTCCAGATGAAGATATCATGGCATTAGTAAATACATCATCGAATACATGGACAATGATGTTTGATGGAGCCACGAACGAAATAGGGCACGGTGTGGGAGCAATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGAGAGTGCGAATGGCATACGAGATGAAAGTAAAAAAATTACGAGTCCTTGGGGACTCCCTGTTGGGAGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTATAACGATTATATTCGAACAATAGCGCAAACTTTTGATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTCTTTCTGCCATGTTTAATGTAGCTTACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAACGGGAACCTGACGGTAAACCTTGGTATCATGATATTAAGCACTACATCGCATATCGGGAGTATCCATCAGGGGTATCAGAAAATAGTAAGCGCATCGTTAGGAGGCTAGCCATGAAGTTCTTTCTAAGTGGTGAAGTATTATACAAAAGAAATTACGATATGACTCTACTGCGATGCGTCGATGCTTTGAAAGCCAAAAAAAGTTTGGAAGAAATTCATGAAGGAGTGTGTGGGACGCATGCAAATGGACACATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAATGTCAAATATACGCAGATAAAACGCATGCTCCAGCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGTTTGGATGTAATTGGACCCATTGAGCCAAAGGCATCAAATGGTCATCGATTCATTTTGGTAGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTATCAAGTTCATATGA

Coding sequence (CDS)

ATGTTGTACTATACTACATGGCTTATTTCAAAAATGGATCCTATAAAATACATTTTTGAAAAGCCATCCTTATCAGGAAGGATAGCTAAGTGGCAAGTGTTGTTATCAGAGTTTGATATCGTTTACATTACTAGAAAGGCCATAAAGGGTAGTGTGATTGCTGATTGCTTAGCGGAGTTACCAATTGAGGACTATGAGCCCATGAAGTTCGATTTTCCAGATGAAGATATCATGGCATTAGTAAATACATCATCGAATACATGGACAATGATGTTTGATGGAGCCACGAACGAAATAGGGCACGGTGTGGGAGCAATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGAGAGTGCGAATGGCATACGAGATGAAAGTAAAAAAATTACGAGTCCTTGGGGACTCCCTGTTGGGAGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTATAACGATTATATTCGAACAATAGCGCAAACTTTTGATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTCTTTCTGCCATGTTTAATGTAGCTTACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAACGGGAACCTGACGGTAAACCTTGGTATCATGATATTAAGCACTACATCGCATATCGGGAGTATCCATCAGGGGTATCAGAAAATAGTAAGCGCATCGTTAGGAGGCTAGCCATGAAGTTCTTTCTAAGTGGTGAAGTATTATACAAAAGAAATTACGATATGACTCTACTGCGATGCGTCGATGCTTTGAAAGCCAAAAAAAGTTTGGAAGAAATTCATGAAGGAGTGTGTGGGACGCATGCAAATGGACACATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAATGTCAAATATACGCAGATAAAACGCATGCTCCAGCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGTTTGGATGTAATTGGACCCATTGAGCCAAAGGCATCAAATGGTCATCGATTCATTTTGGTAGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTATCAAGTTCATATGA

Protein sequence

MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTLLRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVIKFI

Homology

[Close]

BLAST of Cmc05g0129551 vs. NCBI nr
Match: KAA0049671.1 (uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa] >TYK12201.1 uncharacterized protein E5676_scaffold106G001520 [Cucumis melo var. makuwa])

HSP 1 Score: 764.2 bits (1972), Expect = 5.9e-217
Identity = 363/401 (90.52%), Postives = 378/401 (94.26%), Query Frame = 0


Query: 27   RIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMALVNTSSN 86
            RIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMA++NTS N
Sbjct: 647  RIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMAIINTSPN 706

Query: 87   TWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMAYEMK 146
            TWTMMFDGATNEIGHGVG ILMSPDGKWYPLTAKLYFDCTNNMAEYEACSM VRMAYEMK
Sbjct: 707  TWTMMFDGATNEIGHGVGVILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMK 766

Query: 147  VKKLRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADA 206
            +KKLRVLGDS+L VHQLNGEWETRDAKLIPYNDYI TIAQTF+SITFEHVPRESNQV DA
Sbjct: 767  IKKLRVLGDSMLVVHQLNGEWETRDAKLIPYNDYICTIAQTFNSITFEHVPRESNQVTDA 826

Query: 207  LATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKPWYHDIKHYIAYREYPSGVS 266
            LATLSAMFNVAYSE VQPIRMEKYKTPSYCMSLEREP+GK WYHDIKHYIAYREYP G S
Sbjct: 827  LATLSAMFNVAYSENVQPIRMEKYKTPSYCMSLEREPNGKRWYHDIKHYIAYREYPPGAS 886

Query: 267  ENSKRIVRRLAMKFFLSGEVLYKRNYDMTLLRCVDALKAKKSLEEIHEGVCGTHANGHMM 326
            ENSKR +RRLAM+FFL+GEVLYKRNY MTLLRCVDAL+ +K LEEIHEGV  TH N HMM
Sbjct: 887  ENSKRTIRRLAMEFFLNGEVLYKRNYGMTLLRCVDALETEKILEEIHEGVYRTHKNRHMM 946

Query: 327  ARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKTHAPASPLHVLTAPWPFSMWGLDVIG 386
            A Q+LRAGYFWL MES+CIKYVRRC+KCQIYADK HAP  PLHVLTAPWPFSMWGLDVIG
Sbjct: 947  AMQVLRAGYFWLPMESNCIKYVRRCYKCQIYADKAHAPTFPLHVLTAPWPFSMWGLDVIG 1006

Query: 387  PIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVIKFI 428
            PIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAV+KFI
Sbjct: 1007 PIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI 1047

[Close]

BLAST of Cmc05g0129551 vs. NCBI nr
Match: KAA0046609.1 (hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 762.7 bits (1968), Expect = 1.7e-216
Identity = 364/382 (95.29%), Postives = 369/382 (96.60%), Query Frame = 0


Query: 45  RKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVG 104
           +KAIKGSVIADCL ELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVG
Sbjct: 449 KKAIKGSVIADCLTELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVG 508

Query: 105 AILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLN 164
           AILMSPDGKWYPLTAKLYFDCTNNMAEYEACSM VRMAYEMKVKKLRVLGDSLL VHQLN
Sbjct: 509 AILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLN 568

Query: 165 GEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQP 224
           GEWETRDAKLIPYNDYIRTIAQTF SITFEHVPRESNQVADALAT SAMFNVAYSEEVQP
Sbjct: 569 GEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQP 628

Query: 225 IRMEKYKTPSYCMSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSG 284
           IRMEKYKTPSYCMSLEREPDGK WYHDIKHYIAYREYP G SENSKR +RRLAMKFFLSG
Sbjct: 629 IRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSG 688

Query: 285 EVLYKRNYDMTLLRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDC 344
           EVLYKRNYDMTLLRCVDAL+AK  LEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDC
Sbjct: 689 EVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDC 748

Query: 345 IKYVRRCHKCQIYADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAID 404
           IKYVRRCHKCQIYADK HAPASPLHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAID
Sbjct: 749 IKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAID 808

Query: 405 YFTKWVEAASYKSVTKQAVIKF 427
           YFTKWVEAASYKSVTKQAV+K+
Sbjct: 809 YFTKWVEAASYKSVTKQAVVKY 830

[Close]

BLAST of Cmc05g0129551 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 669.8 bits (1727), Expect = 1.5e-188
Identity = 306/431 (71.00%), Postives = 367/431 (85.15%), Query Frame = 0


Query: 1    MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAEL 60
            MLYYTTWLISKMDPIKYIFEKPSLSG IA+WQVLLSE+DIVY+T+KAIKGS +AD LA+ 
Sbjct: 1599 MLYYTTWLISKMDPIKYIFEKPSLSGGIARWQVLLSEYDIVYVTQKAIKGSALADYLAQQ 1658

Query: 61   PIEDYEPMKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYP 120
            PI DY P+KFDFPDE I  +  +  +    TWTMMFDGA+NE+GHG+GAIL+SP G+ YP
Sbjct: 1659 PINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGAILISPKGELYP 1718

Query: 121  LTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIP 180
            L A+L FDC +NMAEYEACSM V+ A +MKVKKL+V GDS+L +HQL GEWETRD KL+P
Sbjct: 1719 LIARLCFDCKHNMAEYEACSMGVQAAIDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLP 1778

Query: 181  YNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYC 240
            Y  +I  ++Q FD I+F+++PRE+NQVADALATL+ MFN+  +E+V+PI++ +   P+ C
Sbjct: 1779 YKQFITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASC 1838

Query: 241  MSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTL 300
            MS+E EPDGKPW+HDIK YI  +EYP   SEN KR +R+LA+KFFL+GE+LYKRN+DM L
Sbjct: 1839 MSIEEEPDGKPWFHDIKQYIKSKEYPPNASENDKRTLRKLAIKFFLNGEILYKRNHDMVL 1898

Query: 301  LRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQI 360
            LRCV+   A + +EEIHEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHKCQI
Sbjct: 1899 LRCVEGRDANRIMEEIHEGVCGTHANGHMMARQILRAGYYWLTIETDCIKYARKCHKCQI 1958

Query: 361  YADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYK 420
            Y+DKTHAPAS LH LTAPWPFSMWG+DVIGPIEPKASNGH+FILVAIDYFTKWVEAASY+
Sbjct: 1959 YSDKTHAPASHLHALTAPWPFSMWGMDVIGPIEPKASNGHQFILVAIDYFTKWVEAASYR 2018

Query: 421  SVTKQAVIKFI 428
             VTK  V+KFI
Sbjct: 2019 DVTKGVVVKFI 2029

[Close]

BLAST of Cmc05g0129551 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 666.4 bits (1718), Expect = 1.7e-187
Identity = 305/431 (70.77%), Postives = 364/431 (84.45%), Query Frame = 0


Query: 1    MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAEL 60
            MLYYTTWLISKMDPIKYIFEKPSLSGRIA+WQVLLSE+DIVY+TRKAIKGS +AD LA+ 
Sbjct: 1208 MLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQ 1267

Query: 61   PIEDYEPMKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYP 120
            PI DY P+KFDFPDE I  +  +  +    TWTMMFDGA+NE+GHG+G IL+SP G+ YP
Sbjct: 1268 PINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYP 1327

Query: 121  LTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIP 180
            LTA+L FDCT+NMAEYEACSM V+ A +MKVKKL+V GDS+L +HQL GEWETRD KL+P
Sbjct: 1328 LTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLP 1387

Query: 181  YNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYC 240
            Y   I  ++Q FD I+F+++PRE+NQVADALATL+ MFN+  +E+V PI++ +   P+ C
Sbjct: 1388 YKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASC 1447

Query: 241  MSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTL 300
            MS+E EPDG PW+H+IK YI  +EYP   SEN KR +R+LAMKFFL+GE+LYKRN+DM L
Sbjct: 1448 MSIEEEPDGNPWFHNIKXYIKSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVL 1507

Query: 301  LRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQI 360
            LRCV+   A + +EE+HEGVCGTHANGHMMARQILRAGY+WLT+ +DCIKY R+CHKCQI
Sbjct: 1508 LRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILRAGYYWLTIXTDCIKYARKCHKCQI 1567

Query: 361  YADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYK 420
            Y+DKTHAPAS LH LTAPWPFSMWG+D+IGPIEPKASNGHRFILVAIDYFTKWVEAAS +
Sbjct: 1568 YSDKTHAPASHLHTLTAPWPFSMWGMDLIGPIEPKASNGHRFILVAIDYFTKWVEAASDR 1627

Query: 421  SVTKQAVIKFI 428
             VTK  V+KFI
Sbjct: 1628 DVTKGVVVKFI 1638

[Close]

BLAST of Cmc05g0129551 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 663.7 bits (1711), Expect = 1.1e-186
Identity = 304/431 (70.53%), Postives = 362/431 (83.99%), Query Frame = 0


Query: 1    MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAEL 60
            MLYYTTWLISKMDPIKYIFEKPSLSGRIA+WQVLLSE+DIVY+T+KAIKGS +AD LA+ 
Sbjct: 1037 MLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTQKAIKGSALADYLAQQ 1096

Query: 61   PIEDYEPMKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYP 120
            PI DY P+KFDFPDE I  +  +  +    TWTMMFDGA+NE+GH +GAIL+SP G+ YP
Sbjct: 1097 PINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHEIGAILISPKGELYP 1156

Query: 121  LTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIP 180
            LT KL FDCT+NMAEYEACSM V+ A +MKVKK +V GDS L +HQL GEWETRD KL+P
Sbjct: 1157 LTTKLCFDCTHNMAEYEACSMGVQAAIDMKVKKFKVFGDSTLVIHQLRGEWETRDVKLLP 1216

Query: 181  YNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYC 240
            Y   I  ++Q FD I+F+++PRE+NQVADALATL+ MFN+  +E+V+PI++ +   P+ C
Sbjct: 1217 YKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASC 1276

Query: 241  MSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTL 300
            MS+E EPDG PW+HDIK YI  +EY    SEN KR +R+LAMKFFL+GE+LYKRN+DM L
Sbjct: 1277 MSIEEEPDGNPWFHDIKQYIKSKEYQPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVL 1336

Query: 301  LRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQI 360
            LRCV+   A + +EE+HEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHKCQI
Sbjct: 1337 LRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILRAGYYWLTIETDCIKYARKCHKCQI 1396

Query: 361  YADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYK 420
            Y+DKTHAP S LH LTAPWPFSMWG+DVIGPIEPKAS+GHRFILVAIDYFTKWVEAASY+
Sbjct: 1397 YSDKTHAPTSHLHTLTAPWPFSMWGMDVIGPIEPKASSGHRFILVAIDYFTKWVEAASYR 1456

Query: 421  SVTKQAVIKFI 428
             VTK  V+KFI
Sbjct: 1457 DVTKGVVVKFI 1467

[Close]

BLAST of Cmc05g0129551 vs. ExPASy Swiss-Prot
Match: Q4R6I1 (Gypsy retrotransposon integrase-like protein 1 OS=Macaca fascicularis OX=9541 GN=GIN1 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.3e-12
Identity = 50/178 (28.09%), Postives = 80/178 (44.94%), Query Frame = 0


Query: 252 IKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYD--MTLLRCVDALKAKKSL 311
           I +Y    EY      + +  +RR A KF    + L+    D     L  V   + KK L
Sbjct: 15  IAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKDKKLFYVGEDRKQNRLVIVSEEEKKKVL 74

Query: 312 EEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKTHAPASPLH 371
            E HE   G H +G      ++ + Y+W ++ +D  ++V  C  CQ+ A  T   A   H
Sbjct: 75  RECHENDSGAH-HGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQV-AKNTVIVAPKQH 134

Query: 372 VLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVIKFI 428
           +L    P+S+  +D++GP    ++  H + ++  D FTKWV       V+   V K I
Sbjct: 135 LLKVENPWSLVTVDLMGPFH-TSNRSHVYAIIMTDLFTKWVVILPLCDVSASEVSKAI 189

[Close]

BLAST of Cmc05g0129551 vs. ExPASy Swiss-Prot
Match: Q66H30 (Gypsy retrotransposon integrase-like protein 1 OS=Rattus norvegicus OX=10116 GN=GIN1 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.1e-11
Identity = 49/178 (27.53%), Postives = 79/178 (44.38%), Query Frame = 0


Query: 252 IKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYD--MTLLRCVDALKAKKSL 311
           I +Y    EY      + +  +RR A KF    + L+    D     L  V   + KK L
Sbjct: 15  IAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVL 74

Query: 312 EEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKTHAPASPLH 371
            E HE   G H +G      ++ + Y+W ++ +D  ++V  C  CQ+ A  T   A   H
Sbjct: 75  RECHENGPGVH-HGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQV-AKSTVIVAPQQH 134

Query: 372 VLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVIKFI 428
           +     P+S+  +D++GP    +S  H + ++  D FTKWV       V+   + K I
Sbjct: 135 LSVVGNPWSVVTVDLMGPFH-TSSRSHVYAMIMTDLFTKWVMILPLCDVSASEISKAI 189

[Close]

BLAST of Cmc05g0129551 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-09
Identity = 43/119 (36.13%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 92  FDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKK 151
           FDGA+  N     VG +L+S DG             TNN AEY+A    +  A +     
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFDD 133

Query: 152 LRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALA 209
           + + GDS L   QL G W+T D  L       R +   FD  +  HVPR +N+ ADALA
Sbjct: 134 IELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPRATNERADALA 192

[Close]

BLAST of Cmc05g0129551 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-06
Identity = 40/136 (29.41%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 102 GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGV 161
           G GA++ + D       +K      TNN+AEY      +  A ++   +  VL DS L V
Sbjct: 19  GYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVV 78

Query: 162 HQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS- 221
            Q++G W+ +   L+      + +A  F  I +E VPR  N  AD LA   AM   A S 
Sbjct: 79  EQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADRLAN-DAMDAAAQSA 138

Query: 222 -EEVQPIRMEKYKTPS 235
             +  P ++   ++P+
Sbjct: 139 AADADPAKIVATESPT 153

[Close]

BLAST of Cmc05g0129551 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-06
Identity = 40/136 (29.41%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 102 GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGV 161
           G GA++ + D       +K      TNN+AEY      +  A ++   +  VL DS L V
Sbjct: 19  GYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVV 78

Query: 162 HQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS- 221
            Q++G W+ +   L+      + +A  F  I +E VPR  N  AD LA   AM   A S 
Sbjct: 79  EQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADRLAN-DAMDAAAQSA 138

Query: 222 -EEVQPIRMEKYKTPS 235
             +  P ++   ++P+
Sbjct: 139 AADADPAKIVATESPT 153

[Close]

BLAST of Cmc05g0129551 vs. ExPASy TrEMBL
Match: A0A5A7U7X5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001520 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 2.8e-217
Identity = 363/401 (90.52%), Postives = 378/401 (94.26%), Query Frame = 0


Query: 27   RIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMALVNTSSN 86
            RIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMA++NTS N
Sbjct: 647  RIAKWQVLLSEFDIVYITRKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMAIINTSPN 706

Query: 87   TWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMAYEMK 146
            TWTMMFDGATNEIGHGVG ILMSPDGKWYPLTAKLYFDCTNNMAEYEACSM VRMAYEMK
Sbjct: 707  TWTMMFDGATNEIGHGVGVILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMK 766

Query: 147  VKKLRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADA 206
            +KKLRVLGDS+L VHQLNGEWETRDAKLIPYNDYI TIAQTF+SITFEHVPRESNQV DA
Sbjct: 767  IKKLRVLGDSMLVVHQLNGEWETRDAKLIPYNDYICTIAQTFNSITFEHVPRESNQVTDA 826

Query: 207  LATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKPWYHDIKHYIAYREYPSGVS 266
            LATLSAMFNVAYSE VQPIRMEKYKTPSYCMSLEREP+GK WYHDIKHYIAYREYP G S
Sbjct: 827  LATLSAMFNVAYSENVQPIRMEKYKTPSYCMSLEREPNGKRWYHDIKHYIAYREYPPGAS 886

Query: 267  ENSKRIVRRLAMKFFLSGEVLYKRNYDMTLLRCVDALKAKKSLEEIHEGVCGTHANGHMM 326
            ENSKR +RRLAM+FFL+GEVLYKRNY MTLLRCVDAL+ +K LEEIHEGV  TH N HMM
Sbjct: 887  ENSKRTIRRLAMEFFLNGEVLYKRNYGMTLLRCVDALETEKILEEIHEGVYRTHKNRHMM 946

Query: 327  ARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKTHAPASPLHVLTAPWPFSMWGLDVIG 386
            A Q+LRAGYFWL MES+CIKYVRRC+KCQIYADK HAP  PLHVLTAPWPFSMWGLDVIG
Sbjct: 947  AMQVLRAGYFWLPMESNCIKYVRRCYKCQIYADKAHAPTFPLHVLTAPWPFSMWGLDVIG 1006

Query: 387  PIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVIKFI 428
            PIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAV+KFI
Sbjct: 1007 PIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI 1047

[Close]

BLAST of Cmc05g0129551 vs. ExPASy TrEMBL
Match: A0A5A7TZF3 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001550 PE=4 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 8.3e-217
Identity = 364/382 (95.29%), Postives = 369/382 (96.60%), Query Frame = 0


Query: 45  RKAIKGSVIADCLAELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVG 104
           +KAIKGSVIADCL ELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVG
Sbjct: 449 KKAIKGSVIADCLTELPIEDYEPMKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVG 508

Query: 105 AILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLN 164
           AILMSPDGKWYPLTAKLYFDCTNNMAEYEACSM VRMAYEMKVKKLRVLGDSLL VHQLN
Sbjct: 509 AILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLN 568

Query: 165 GEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQP 224
           GEWETRDAKLIPYNDYIRTIAQTF SITFEHVPRESNQVADALAT SAMFNVAYSEEVQP
Sbjct: 569 GEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQP 628

Query: 225 IRMEKYKTPSYCMSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSG 284
           IRMEKYKTPSYCMSLEREPDGK WYHDIKHYIAYREYP G SENSKR +RRLAMKFFLSG
Sbjct: 629 IRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSG 688

Query: 285 EVLYKRNYDMTLLRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDC 344
           EVLYKRNYDMTLLRCVDAL+AK  LEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDC
Sbjct: 689 EVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDC 748

Query: 345 IKYVRRCHKCQIYADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAID 404
           IKYVRRCHKCQIYADK HAPASPLHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAID
Sbjct: 749 IKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAID 808

Query: 405 YFTKWVEAASYKSVTKQAVIKF 427
           YFTKWVEAASYKSVTKQAV+K+
Sbjct: 809 YFTKWVEAASYKSVTKQAVVKY 830

[Close]

BLAST of Cmc05g0129551 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 7.3e-189
Identity = 306/431 (71.00%), Postives = 367/431 (85.15%), Query Frame = 0


Query: 1    MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAEL 60
            MLYYTTWLISKMDPIKYIFEKPSLSG IA+WQVLLSE+DIVY+T+KAIKGS +AD LA+ 
Sbjct: 1599 MLYYTTWLISKMDPIKYIFEKPSLSGGIARWQVLLSEYDIVYVTQKAIKGSALADYLAQQ 1658

Query: 61   PIEDYEPMKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYP 120
            PI DY P+KFDFPDE I  +  +  +    TWTMMFDGA+NE+GHG+GAIL+SP G+ YP
Sbjct: 1659 PINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGAILISPKGELYP 1718

Query: 121  LTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIP 180
            L A+L FDC +NMAEYEACSM V+ A +MKVKKL+V GDS+L +HQL GEWETRD KL+P
Sbjct: 1719 LIARLCFDCKHNMAEYEACSMGVQAAIDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLP 1778

Query: 181  YNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYC 240
            Y  +I  ++Q FD I+F+++PRE+NQVADALATL+ MFN+  +E+V+PI++ +   P+ C
Sbjct: 1779 YKQFITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASC 1838

Query: 241  MSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTL 300
            MS+E EPDGKPW+HDIK YI  +EYP   SEN KR +R+LA+KFFL+GE+LYKRN+DM L
Sbjct: 1839 MSIEEEPDGKPWFHDIKQYIKSKEYPPNASENDKRTLRKLAIKFFLNGEILYKRNHDMVL 1898

Query: 301  LRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQI 360
            LRCV+   A + +EEIHEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHKCQI
Sbjct: 1899 LRCVEGRDANRIMEEIHEGVCGTHANGHMMARQILRAGYYWLTIETDCIKYARKCHKCQI 1958

Query: 361  YADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYK 420
            Y+DKTHAPAS LH LTAPWPFSMWG+DVIGPIEPKASNGH+FILVAIDYFTKWVEAASY+
Sbjct: 1959 YSDKTHAPASHLHALTAPWPFSMWGMDVIGPIEPKASNGHQFILVAIDYFTKWVEAASYR 2018

Query: 421  SVTKQAVIKFI 428
             VTK  V+KFI
Sbjct: 2019 DVTKGVVVKFI 2029

[Close]

BLAST of Cmc05g0129551 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 8.1e-188
Identity = 305/431 (70.77%), Postives = 364/431 (84.45%), Query Frame = 0


Query: 1    MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAEL 60
            MLYYTTWLISKMDPIKYIFEKPSLSGRIA+WQVLLSE+DIVY+TRKAIKGS +AD LA+ 
Sbjct: 1208 MLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTRKAIKGSALADYLAQQ 1267

Query: 61   PIEDYEPMKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYP 120
            PI DY P+KFDFPDE I  +  +  +    TWTMMFDGA+NE+GHG+G IL+SP G+ YP
Sbjct: 1268 PINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHGIGGILISPKGELYP 1327

Query: 121  LTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIP 180
            LTA+L FDCT+NMAEYEACSM V+ A +MKVKKL+V GDS+L +HQL GEWETRD KL+P
Sbjct: 1328 LTARLCFDCTHNMAEYEACSMGVQAAVDMKVKKLKVFGDSMLVIHQLRGEWETRDVKLLP 1387

Query: 181  YNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYC 240
            Y   I  ++Q FD I+F+++PRE+NQVADALATL+ MFN+  +E+V PI++ +   P+ C
Sbjct: 1388 YKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVSPIKVGRRDVPASC 1447

Query: 241  MSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTL 300
            MS+E EPDG PW+H+IK YI  +EYP   SEN KR +R+LAMKFFL+GE+LYKRN+DM L
Sbjct: 1448 MSIEEEPDGNPWFHNIKXYIKSKEYPPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVL 1507

Query: 301  LRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQI 360
            LRCV+   A + +EE+HEGVCGTHANGHMMARQILRAGY+WLT+ +DCIKY R+CHKCQI
Sbjct: 1508 LRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILRAGYYWLTIXTDCIKYARKCHKCQI 1567

Query: 361  YADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYK 420
            Y+DKTHAPAS LH LTAPWPFSMWG+D+IGPIEPKASNGHRFILVAIDYFTKWVEAAS +
Sbjct: 1568 YSDKTHAPASHLHTLTAPWPFSMWGMDLIGPIEPKASNGHRFILVAIDYFTKWVEAASDR 1627

Query: 421  SVTKQAVIKFI 428
             VTK  V+KFI
Sbjct: 1628 DVTKGVVVKFI 1638

[Close]

BLAST of Cmc05g0129551 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 5.2e-187
Identity = 304/431 (70.53%), Postives = 362/431 (83.99%), Query Frame = 0


Query: 1    MLYYTTWLISKMDPIKYIFEKPSLSGRIAKWQVLLSEFDIVYITRKAIKGSVIADCLAEL 60
            MLYYTTWLISKMDPIKYIFEKPSLSGRIA+WQVLLSE+DIVY+T+KAIKGS +AD LA+ 
Sbjct: 1037 MLYYTTWLISKMDPIKYIFEKPSLSGRIARWQVLLSEYDIVYVTQKAIKGSALADYLAQQ 1096

Query: 61   PIEDYEPMKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYP 120
            PI DY P+KFDFPDE I  +  +  +    TWTMMFDGA+NE+GH +GAIL+SP G+ YP
Sbjct: 1097 PINDYIPVKFDFPDEYISTITASEESLDPQTWTMMFDGASNELGHEIGAILISPKGELYP 1156

Query: 121  LTAKLYFDCTNNMAEYEACSMRVRMAYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIP 180
            LT KL FDCT+NMAEYEACSM V+ A +MKVKK +V GDS L +HQL GEWETRD KL+P
Sbjct: 1157 LTTKLCFDCTHNMAEYEACSMGVQAAIDMKVKKFKVFGDSTLVIHQLRGEWETRDVKLLP 1216

Query: 181  YNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRMEKYKTPSYC 240
            Y   I  ++Q FD I+F+++PRE+NQVADALATL+ MFN+  +E+V+PI++ +   P+ C
Sbjct: 1217 YKQLITELSQEFDEISFDYLPRENNQVADALATLAVMFNLELNEDVRPIKVGRRDVPASC 1276

Query: 241  MSLEREPDGKPWYHDIKHYIAYREYPSGVSENSKRIVRRLAMKFFLSGEVLYKRNYDMTL 300
            MS+E EPDG PW+HDIK YI  +EY    SEN KR +R+LAMKFFL+GE+LYKRN+DM L
Sbjct: 1277 MSIEEEPDGNPWFHDIKQYIKSKEYQPNASENDKRTLRKLAMKFFLNGEILYKRNHDMVL 1336

Query: 301  LRCVDALKAKKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQI 360
            LRCV+   A + +EE+HEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHKCQI
Sbjct: 1337 LRCVEGRDANRIMEEVHEGVCGTHANGHMMARQILRAGYYWLTIETDCIKYARKCHKCQI 1396

Query: 361  YADKTHAPASPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYK 420
            Y+DKTHAP S LH LTAPWPFSMWG+DVIGPIEPKAS+GHRFILVAIDYFTKWVEAASY+
Sbjct: 1397 YSDKTHAPTSHLHTLTAPWPFSMWGMDVIGPIEPKASSGHRFILVAIDYFTKWVEAASYR 1456

Query: 421  SVTKQAVIKFI 428
             VTK  V+KFI
Sbjct: 1457 DVTKGVVVKFI 1467

[Close]

BLAST of Cmc05g0129551 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-12
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 85  SNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMA 144
           +++ T+ FDGA+  N    G GA+L + D        +   + TNN+AEY A  + +R A
Sbjct: 152 NDSCTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSA 211

Query: 145 YEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQ 204
            +   K + VLGDS+L   Q+ G W+T   K+       + +  +F +   +H+ RE N 
Sbjct: 212 LDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNS 271

Query: 205 VADALATLSAMF 215
            AD  A  SA+F
Sbjct: 272 EADKQAN-SAIF 282

[Close]

BLAST of Cmc05g0129551 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-12
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 85  SNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRMA 144
           +++ T+ FDGA+  N    G GA+L + D        +   + TNN+AEY A  + +R A
Sbjct: 152 NDSCTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSA 211

Query: 145 YEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQ 204
            +   K + VLGDS+L   Q+ G W+T   K+       + +  +F +   +H+ RE N 
Sbjct: 212 LDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNS 271

Query: 205 VADALATLSAMF 215
            AD  A  SA+F
Sbjct: 272 EADKQAN-SAIF 282

[Close]

BLAST of Cmc05g0129551 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-08
Identity = 40/130 (30.77%), Postives = 57/130 (43.85%), Query Frame = 0


Query: 84  SSNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMRVRM 143
           S  T  + FDGA+  N    G  A+L + DG       +     TNN AEY A  + ++ 
Sbjct: 213 SDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKY 272

Query: 144 AYEMKVKKLRVLGDSLLGVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESN 203
           A E   K ++V GDS L   Q+ G+W+     L   +   + +     S    HV R  N
Sbjct: 273 AIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLN 332

Query: 204 QVADALATLS 212
             AD  A L+
Sbjct: 333 ADADEQANLA 342

The following BLAST results are available for this feature:

BLAST of Cmc05g0129551 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049671.1	5.9e-217	90.52	uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa] >TYK12...	[more]
KAA0046609.1	1.7e-216	95.29	hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa]	[more]
XP_022147189.1	1.5e-188	71.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022158986.1	1.7e-187	70.77	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022157796.1	1.1e-186	70.53	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]

BLAST of Cmc05g0129551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4R6I1	6.3e-12	28.09	Gypsy retrotransposon integrase-like protein 1 OS=Macaca fascicularis OX=9541 GN...	[more]
Q66H30	4.1e-11	27.53	Gypsy retrotransposon integrase-like protein 1 OS=Rattus norvegicus OX=10116 GN=...	[more]
Q9HSF6	1.3e-09	36.13	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
P9WLH5	3.0e-06	29.41	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	3.0e-06	29.41	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]

BLAST of Cmc05g0129551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7X5	2.8e-217	90.52	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00152...	[more]
A0A5A7TZF3	8.3e-217	95.29	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00155...	[more]
A0A6J1D099	7.3e-189	71.00	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1E2J7	8.1e-188	70.77	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1DZ90	5.2e-187	70.53	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]

BLAST of Cmc05g0129551 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	2.2e-12	32.58	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	2.2e-12	32.58	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	1.5e-08	30.77	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 92..209 e-value: 2.1E-19 score: 69.6
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 84..213 score: 12.856162
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 369..427 e-value: 3.2E-12 score: 48.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 86..212 e-value: 2.9E-28 score: 100.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 306..357 e-value: 1.5E-7 score: 31.4
None	No IPR available	GENE3D	1.10.340.70		coord: 265..357 e-value: 7.2E-13 score: 50.6
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 1..403
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..403
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 88..210 e-value: 1.43453E-39 score: 136.448
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 370..427 score: 9.09834
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 371..427
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 86..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0129551.1	Cmc05g0129551.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding