Cmc05g0129521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0129521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr05: 7496741 .. 7497142 (-)
RNA-Seq Expression	Cmc05g0129521
Synteny	Cmc05g0129521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTAGATGACATTCTACTTATTGGGAATGATGTAGGTTATCTAACTGATATTAAGAAATGGCTAGCTATGCAATTCCAAATGAAAGATTTGGGAAATGCTCAATACGTTCTTGGTAGCAAAATAGTTCGGAACCGAAAGAACAAAATACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTATGTTGCCGTATAGATGTGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTGTTGGGAGCTTGATGTATGGAATGTTATATACTAGACCTGACATTTGCTATTCCGTAGGGATGGTTAGTAGATATTAG

mRNA sequence

ATGTATGTAGATGACATTCTACTTATTGGGAATGATGTAGGTTATCTAACTGATATTAAGAAATGGCTAGCTATGCAATTCCAAATGAAAGATTTGGGAAATGCTCAATACGTTCTTGGTAGCAAAATAGTTCGGAACCGAAAGAACAAAATACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTATGTTGCCGTATAGATGTGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTGTTGGGAGCTTGATGTATGGAATGTTATATACTAGACCTGACATTTGCTATTCCGTAGGGATGGTTAGTAGATATTAG

Coding sequence (CDS)

ATGTATGTAGATGACATTCTACTTATTGGGAATGATGTAGGTTATCTAACTGATATTAAGAAATGGCTAGCTATGCAATTCCAAATGAAAGATTTGGGAAATGCTCAATACGTTCTTGGTAGCAAAATAGTTCGGAACCGAAAGAACAAAATACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAGGGTATGTTGCCGTATAGATGTGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCTTCTGCTGTTGGGAGCTTGATGTATGGAATGTTATATACTAGACCTGACATTTGCTATTCCGTAGGGATGGTTAGTAGATATTAG

Protein sequence

MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY

Homology

[Close]

BLAST of Cmc05g0129521 vs. NCBI nr
Match: TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-60
Identity = 119/132 (90.15%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +YVDDILLIGNDVG+L DIKKWLAMQFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYI
Sbjct: 424 LYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTLAMSQTSYI 483

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKM NSKKG+LPYR GIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMY ML TR
Sbjct: 484 DKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTR 543

Query: 121 PDICYSVGMVSR 133
           P+ICYSVG+VSR
Sbjct: 544 PNICYSVGIVSR 555

[Close]

BLAST of Cmc05g0129521 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +YVDDILLIGNDVG+LTDIK+WLA QFQMKDLGNAQYVLG +IVRN KNK LAMSQTSYI
Sbjct: 69  LYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTLAMSQTSYI 128

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDMSNIPYASA+GSLMY ML TR
Sbjct: 129 DKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLMYAMLCTR 188

Query: 121 PDICYSVGMVSRY 134
            DICYSVG+V+RY
Sbjct: 189 VDICYSVGIVNRY 201

[Close]

BLAST of Cmc05g0129521 vs. NCBI nr
Match: KAA0032046.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK16866.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 2.7e-59
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 13  VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNS 72
           VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNS
Sbjct: 248 VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNS 307

Query: 73  KKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRPDICYSVGM 130
           KKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRP+ICYSVGM
Sbjct: 308 KKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRPNICYSVGM 364

[Close]

BLAST of Cmc05g0129521 vs. NCBI nr
Match: TYK29680.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 3.5e-59
Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +Y DDILLIGND+G+LTDIK+WLA QFQMK LGNAQYVLG +IVRN+KNK LAMSQTSYI
Sbjct: 443 LYADDILLIGNDIGHLTDIKEWLATQFQMKYLGNAQYVLGIQIVRNQKNKTLAMSQTSYI 502

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMY ML TR
Sbjct: 503 DKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTR 562

Query: 121 PDICYSVGMVSRY 134
           P+ICYSVG+VSRY
Sbjct: 563 PEICYSVGIVSRY 575

[Close]

BLAST of Cmc05g0129521 vs. NCBI nr
Match: KAA0067819.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 5.9e-59
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           MYVDDILLIGNDVG+LTDIKKWLA QFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYI
Sbjct: 568 MYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYI 627

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKMQNSKKG+LPY  GIHLSKEQCPKTPQEVEDMSNI YA A+GSLMY ML T 
Sbjct: 628 DKMLSRYKMQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMSNISYAFAIGSLMYAMLCTI 687

Query: 121 PDICYSVGMVSRY 134
           PDICYSVG+VSRY
Sbjct: 688 PDICYSVGIVSRY 700

[Close]

BLAST of Cmc05g0129521 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.3e-31
Identity = 65/133 (48.87%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 1    MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
            +YVDD+L++G D G +  +K  L+  F MKDLG AQ +LG KIVR R ++ L +SQ  YI
Sbjct: 1007 LYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYI 1066

Query: 61   DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
            +++L R+ M+N+K    P    + LSK+ CP T +E  +M+ +PY+SAVGSLMY M+ TR
Sbjct: 1067 ERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTR 1126

Query: 121  PDICYSVGMVSRY 134
            PDI ++VG+VSR+
Sbjct: 1127 PDIAHAVGVVSRF 1139

[Close]

BLAST of Cmc05g0129521 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-12
Identity = 45/137 (32.85%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 1    MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
            +YVDD+++   D+  + + K++L  +F+M DL   ++ +G +I   +++KI  +SQ++Y+
Sbjct: 1086 LYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI-EMQEDKIY-LSQSAYV 1145

Query: 61   DKMLSRYKMQNSKKGMLPYRCGIHL----SKEQCPKTPQEVEDMSNIPYASAVGSLMYGM 120
             K+LS++ M+N      P    I+     S E C           N P  S +G LMY M
Sbjct: 1146 KKILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIM 1205

Query: 121  LYTRPDICYSVGMVSRY 134
            L TRPD+  +V ++SRY
Sbjct: 1206 LCTRPDLTTAVNILSRY 1209

[Close]

BLAST of Cmc05g0129521 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.7e-09
Identity = 45/133 (33.83%), Postives = 64/133 (48.12%), Query Frame = 0


Query: 1    MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
            +YVDDIL+ GND   L      L+ +F +K+  +  Y LG  I   R  + L +SQ  Y 
Sbjct: 1132 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLG--IEAKRVPQGLHLSQRRYT 1191

Query: 61   DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
              +L+R  M  +K    P      L+     K P   E      Y   VGSL Y + +TR
Sbjct: 1192 LDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTR 1251

Query: 121  PDICYSVGMVSRY 134
            PD+ Y+V  +S+Y
Sbjct: 1252 PDLSYAVNRLSQY 1255

[Close]

BLAST of Cmc05g0129521 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08
Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 1    MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
            +YVDDIL+ GND   L +    L+ +F +KD     Y LG  I   R    L +SQ  YI
Sbjct: 1149 VYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLG--IEAKRVPTGLHLSQRRYI 1208

Query: 61   DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
              +L+R  M  +K    P      LS     K     E      Y   VGSL Y + +TR
Sbjct: 1209 LDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQY-LAFTR 1268

Query: 121  PDICYSVGMVSRY 134
            PDI Y+V  +S++
Sbjct: 1269 PDISYAVNRLSQF 1272

[Close]

BLAST of Cmc05g0129521 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 42/133 (31.58%), Postives = 61/133 (45.86%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +YVDD+L+          +K+ L   + MKDLG     LG  I     N  + +S   YI
Sbjct: 86  VYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNI-HQSSNGDITLSLQDYI 145

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
            K  S  ++   K    P  C    SK     T   ++D++  PY S VG L++     R
Sbjct: 146 AKAASESEINTFKLTQTPL-CN---SKPLFETTSPHLKDIT--PYQSIVGQLLFCANTGR 205

Query: 121 PDICYSVGMVSRY 134
           PDI Y V ++SR+
Sbjct: 206 PDISYPVSLLSRF 211

[Close]

BLAST of Cmc05g0129521 vs. ExPASy TrEMBL
Match: A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 119/132 (90.15%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +YVDDILLIGNDVG+L DIKKWLAMQFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYI
Sbjct: 424 LYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTLAMSQTSYI 483

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKM NSKKG+LPYR GIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMY ML TR
Sbjct: 484 DKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTR 543

Query: 121 PDICYSVGMVSR 133
           P+ICYSVG+VSR
Sbjct: 544 PNICYSVGIVSR 555

[Close]

BLAST of Cmc05g0129521 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.9e-60
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +YVDDILLIGNDVG+LTDIK+WLA QFQMKDLGNAQYVLG +IVRN KNK LAMSQTSYI
Sbjct: 69  LYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTLAMSQTSYI 128

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDMSNIPYASA+GSLMY ML TR
Sbjct: 129 DKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLMYAMLCTR 188

Query: 121 PDICYSVGMVSRY 134
            DICYSVG+V+RY
Sbjct: 189 VDICYSVGIVNRY 201

[Close]

BLAST of Cmc05g0129521 vs. ExPASy TrEMBL
Match: A0A5A7SPW4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001470 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.3e-59
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 13  VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNS 72
           VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNS
Sbjct: 248 VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNS 307

Query: 73  KKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRPDICYSVGM 130
           KKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRP+ICYSVGM
Sbjct: 308 KKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTRPNICYSVGM 364

[Close]

BLAST of Cmc05g0129521 vs. ExPASy TrEMBL
Match: A0A5D3E2A3 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00300 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +Y DDILLIGND+G+LTDIK+WLA QFQMK LGNAQYVLG +IVRN+KNK LAMSQTSYI
Sbjct: 443 LYADDILLIGNDIGHLTDIKEWLATQFQMKYLGNAQYVLGIQIVRNQKNKTLAMSQTSYI 502

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMY ML TR
Sbjct: 503 DKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTR 562

Query: 121 PDICYSVGMVSRY 134
           P+ICYSVG+VSRY
Sbjct: 563 PEICYSVGIVSRY 575

[Close]

BLAST of Cmc05g0129521 vs. ExPASy TrEMBL
Match: A0A5A7VRN6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00230 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.9e-59
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           MYVDDILLIGNDVG+LTDIKKWLA QFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYI
Sbjct: 568 MYVDDILLIGNDVGHLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYI 627

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
           DKMLSRYKMQNSKKG+LPY  GIHLSKEQCPKTPQEVEDMSNI YA A+GSLMY ML T 
Sbjct: 628 DKMLSRYKMQNSKKGLLPYIYGIHLSKEQCPKTPQEVEDMSNISYAFAIGSLMYAMLCTI 687

Query: 121 PDICYSVGMVSRY 134
           PDICYSVG+VSRY
Sbjct: 688 PDICYSVGIVSRY 700

[Close]

BLAST of Cmc05g0129521 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 45.8 bits (107), Expect = 3.1e-05
Identity = 34/133 (25.56%), Postives = 62/133 (46.62%), Query Frame = 0


Query: 1   MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYI 60
           +YVDDI++  N+   + ++K  L   F+++DLG  +Y LG +I R+     + + Q  Y 
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYA 341

Query: 61  DKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYGMLYTR 120
             +L    +   K   +P    +  S           + +    Y   +G LMY +  TR
Sbjct: 342 LDLLDETGLLGCKPSSVPMDPSVTFSAH------SGGDFVDAKAYRRLIGRLMY-LQITR 401

Query: 121 PDICYSVGMVSRY 134
            DI ++V  +S++
Sbjct: 402 LDISFAVNKLSQF 405

The following BLAST results are available for this feature:

BLAST of Cmc05g0129521 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03644.1	4.1e-60	90.15	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK11050.1	2.0e-59	87.97	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0032046.1	2.7e-59	99.15	gag/pol protein [Cucumis melo var. makuwa] >TYK16866.1 gag/pol protein [Cucumis ...	[more]
TYK29680.1	3.5e-59	87.22	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0067819.1	5.9e-59	88.72	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0129521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.3e-31	48.87	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.3e-12	32.85	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	7.7e-09	33.83	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	5.0e-08	35.34	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	1.2e-06	31.58	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc05g0129521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BX45	2.0e-60	90.15	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007...	[more]
A0A5D3CI71	9.9e-60	87.97	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330...	[more]
A0A5A7SPW4	1.3e-59	99.15	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00147...	[more]
A0A5D3E2A3	1.7e-59	87.22	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G...	[more]
A0A5A7VRN6	2.9e-59	88.72	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G002...	[more]

BLAST of Cmc05g0129521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.1e-05	25.56	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..78 e-value: 5.5E-13 score: 49.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0129521.1	Cmc05g0129521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding