Cmc05g0127631 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCTCAACAAAATCCCTCTTCTCAGCTTTTCTATCTTGGTATCAAAGCAAGAAAAATGGCTAACGCTTCTCTCATTGCCTTACCGTCGATCACCCCAAACTTTAGCACTCCTTCATTAGATCAATTGTTGAATCAACTTTCCTCCACCAAGCTTGACCGAACAAACTATCTTTTATGGAAGACATTGCCACGCCCAATCTTGAAAAACTATAAGCTAGAGAGGTATATATCTGACGGGTGAAACTCCCTGTCCCCCAAAATTTCTCTCATTTGCCACAGGTGAAACCTCAGAAAAGTTCGACGATGAAGCTCCAATTGCAGTTGATTCAAGTTCAATAGCTCTCCCTTCTAGTTCGGCAGCCCCAAAAGTCGTGAACCCAAGGTATAAGCAATGGGCCACCTCCAATCTACTTCTACTTGGATGGATTTATAACTCCATGGTGCCAGATGTAGTACTTCAGCTCTTGGGATTTAATACAACAAAGGACCTTTGGGAGGCCATTCAAGATTTATTTGGAGTTCAATCAAGGGCTAAAGAAGATTTTCTTTGCCACATCTTCCAAACTACTTGAAGGGGTAATTATAAGATGGAAGATTATTTGAGAATTATGAAAACTAACACGAATAATCTTGGCCAAACCGGGAGTCCTAACCATCTTCACCTCTAATTTCATTAGGGTTATTGGAGCTTAATGAAGTTTACAATTGCGTCACTATTGTTATCCAAGGCAAACCCAACATCTCATGGCTAGATATGCACTCTAAACTACTGATTTTTGAAAAGCGTCTCGAACATCAAAAATTCACAAAGAAATCCAAAAAATATTATCTTAAATGTCGTTGTCAATATGGTGCAAAACAGAGGGAATGATACTTGACAGAACTTTAGTTCTTATTAGTTTGGTGGGAACCGATCTAATCAAAATGGACAGTGCAGTAGGAATACCTTCAATGGTCGGGGACGTGGTTGAGGAAGAGGTAACAAACGTACATGTCAGGTATGTAGAAAATATGGACACTTAGCTTTAGTTTGCTATAACAGATACAGTAAAGAGTTTGCTGAAAATGTAAATCAGAATAGGGAACATACCCTAAATCAGAATGGAAACCAAAATCCTGCTATTGCCTTTGTCGCTACTCAGAACTCAACCTCATTTGCCACACTTGAAACTGTAGTTGGTATAAATTGGTATGTTGATAGTGGTGCCACAAACCATGTTACATTTGATCATTCAAACTTGTGGAATGTTGCTAATTATTCTGGTAATAAAATCGTAGTTGTTAGTAATGGAAATAAATTACATATATCATGTGTGGGCTGTGCAAGTTTAATTGATGAAAAGAATTGTTTAAGACTCAAAAATATTTTGTGTGTGCCTGAAATTAAGAAAATTTTGGTTAGTGTGTAA TTCTCAACAAAATCCCTCTTCTCAGCTTTTCTATCTTGGTATCAAAGCAAGAAAAATGGCTAACGCTTCTCTCATTGCCTTACCGTCGATCACCCCAAACTTTAGCACTCCTTCATTAGATCAATTGTTGAATCAACTTTCCTCCACCAAGCTTGACCGAACAAACTATCTTTTATGGAAGACATTGCCACGCCCAATCTTGAAAAACTATAAGCTAGAGAGGTATATATCTGACGGGTGAAACTCCCTGTCCCCCAAAATTTCTCTCATTTGCCACAGGTGAAACCTCAGAAAAGTTCGACGATGAAGCTCCAATTGCAGTTGATTCAAGTTCAATAGCTCTCCCTTCTAGTTCGGCAGCCCCAAAAGTCGTGAACCCAAGGTATAAGCAATGGGCCACCTCCAATCTACTTCTACTTGGATGGATTTATAACTCCATGGTGCCAGATGTAGTACTTCAGCTCTTGGGATTTAATACAACAAAGGACCTTTGGGAGGCCATTCAAGATTTATTTGGAGTTCAATCAAGGGCTAAAGAAGATTTTCTTTGCCACATCTTCCAAACTACTTGAAGGGGTAATTATAAGATGGAAGATTATTTGAGAATTATGAAAACTAACACGAATAATCTTGGCCAAACCGGGAGTCCTAACCATCTTCACCTCTAATTTCATTAGGGTTATTGGAGCTTAATGAAGTTTACAATTGCGTCACTATTGTTATCCAAGGCAAACCCAACATCTCATGGCTAGATATGCACTCTAAACTACTGATTTTTGAAAAGCGTCTCGAACATCAAAAATTCACAAAGAAATCCAAAAAATATTATCTTAAATGTCGTTGTCAATATGGTGCAAAACAGAGGGAATGATACTTGACAGAACTTTAGTTCTTATTAGTTTGGTGGGAACCGATCTAATCAAAATGGACAGTGCAGTAGGAATACCTTCAATGGTCGGGGACGTGGTTGAGGAAGAGGTAACAAACGTACATGTCAGGGAACATACCCTAAATCAGAATGGAAACCAAAATCCTGCTATTGCCTTTGTCGCTACTCAGAACTCAACCTCATTTGCCACACTTGAAACTGTAGTTGGTATAAATTGGTATGTTGATAGTGGTGCCACAAACCATGTTACATTTGATCATTCAAACTTGTGGAATGTTGCTAATTATTCTGGTAATAAAATCGTAGTTGTTAGTAATGGAAATAAATTACATATATCATGTGTGGGCTGTGCAAGTTTAATTGATGAAAAGAATTGTTTAAGACTCAAAAATATTTTGTGTGTGCCTGAAATTAAGAAAATTTTGGTTAGTGTGTAA ATGTCGTTGTCAATATGGTGCAAAACAGAGGGAATGATACTTGACAGAACTTTAGTTCTTATTAGTTTGGTGGGAACCGATCTAATCAAAATGGACAGTGCAGTAGGAATACCTTCAATGGTCGGGGACGTGGTTGAGGAAGAGGTAACAAACGTACATGTCAGGGAACATACCCTAAATCAGAATGGAAACCAAAATCCTGCTATTGCCTTTGTCGCTACTCAGAACTCAACCTCATTTGCCACACTTGAAACTGTAGTTGGTATAAATTGGTATGTTGATAGTGGTGCCACAAACCATGTTACATTTGATCATTCAAACTTGTGGAATGTTGCTAATTATTCTGGTAATAAAATCGTAGTTGTTAGTAATGGAAATAAATTACATATATCATGTGTGGGCTGTGCAAGTTTAATTGATGAAAAGAATTGTTTAAGACTCAAAAATATTTTGTGTGTGCCTGAAATTAAGAAAATTTTGGTTAGTGTGTAA MSLSIWCKTEGMILDRTLVLISLVGTDLIKMDSAVGIPSMVGDVVEEEVTNVHVREHTLNQNGNQNPAIAFVATQNSTSFATLETVVGINWYVDSGATNHVTFDHSNLWNVANYSGNKIVVVSNGNKLHISCVGCASLIDEKNCLRLKNILCVPEIKKILVSV Homology
BLAST of Cmc05g0127631 vs. NCBI nr
Match: KAA0057475.1 (uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa] >TYK30171.1 uncharacterized protein E5676_scaffold216G001590 [Cucumis melo var. makuwa]) HSP 1 Score: 145.6 bits (366), Expect = 3.8e-31 Identity = 89/143 (62.24%), Postives = 98/143 (68.53%), Query Frame = 0
BLAST of Cmc05g0127631 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]) HSP 1 Score: 110.2 bits (274), Expect = 1.8e-20 Identity = 62/108 (57.41%), Postives = 77/108 (71.30%), Query Frame = 0
BLAST of Cmc05g0127631 vs. NCBI nr
Match: XP_016901889.1 (PREDICTED: uncharacterized protein LOC107991455 [Cucumis melo]) HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18 Identity = 62/111 (55.86%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of Cmc05g0127631 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 1.8e-17 Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Cmc05g0127631 vs. NCBI nr
Match: KAA0049613.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK15971.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-14 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09 Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy TrEMBL
Match: A0A5D3E3L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001590 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.8e-31 Identity = 89/143 (62.24%), Postives = 98/143 (68.53%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 8.5e-21 Identity = 62/108 (57.41%), Postives = 77/108 (71.30%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy TrEMBL
Match: A0A1S4E0Z3 (uncharacterized protein LOC107991455 OS=Cucumis melo OX=3656 GN=LOC107991455 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 6.1e-19 Identity = 62/111 (55.86%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 8.8e-18 Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Cmc05g0127631 vs. ExPASy TrEMBL
Match: A0A5A7U192 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00950 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.0e-15 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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