Cmc05g0126201 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0126201
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposon Tf2-6 polyprotein
Location	CMiso1.1chr05: 3395491 .. 3395790 (-)
RNA-Seq Expression	Cmc05g0126201
Synteny	Cmc05g0126201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAATTGTCCACAACCCAAGGATGTGACAGGATTAAGGGGTTTCCTAGGCTTGACGGGGTATTATAGAAGGTTTGTGAAGGGCTATGGTGAAATTGCAGCCCCATTAACCAAACTCCTACAGAAGAATGCATTCCATTGGAATGAAGAAGCCACAATAGCCTTTGAACTGCTTAAAACTTCCATGACTACCACACCCGTACTAACTCTCCCGGATTGGTCTTTGCCCTTTGTGCTGGAAACGGATGCTTCAGGTATTGGTTTGGGAACGATGTTGTCACAAAATGGCATCCAATAG

mRNA sequence

ATGATAAATTGTCCACAACCCAAGGATGTGACAGGATTAAGGGGTTTCCTAGGCTTGACGGGGTATTATAGAAGGTTTGTGAAGGGCTATGGTGAAATTGCAGCCCCATTAACCAAACTCCTACAGAAGAATGCATTCCATTGGAATGAAGAAGCCACAATAGCCTTTGAACTGCTTAAAACTTCCATGACTACCACACCCGTACTAACTCTCCCGGATTGGTCTTTGCCCTTTGTGCTGGAAACGGATGCTTCAGGTATTGGTTTGGGAACGATGTTGTCACAAAATGGCATCCAATAG

Coding sequence (CDS)

ATGATAAATTGTCCACAACCCAAGGATGTGACAGGATTAAGGGGTTTCCTAGGCTTGACGGGGTATTATAGAAGGTTTGTGAAGGGCTATGGTGAAATTGCAGCCCCATTAACCAAACTCCTACAGAAGAATGCATTCCATTGGAATGAAGAAGCCACAATAGCCTTTGAACTGCTTAAAACTTCCATGACTACCACACCCGTACTAACTCTCCCGGATTGGTCTTTGCCCTTTGTGCTGGAAACGGATGCTTCAGGTATTGGTTTGGGAACGATGTTGTCACAAAATGGCATCCAATAG

Protein sequence

MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLKTSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNGIQ

Homology

[Close]

BLAST of Cmc05g0126201 vs. NCBI nr
Match: KAA0041543.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 3.9e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLL KNAFHWNEEATIAFELLK
Sbjct: 9   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLHKNAFHWNEEATIAFELLK 68

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
           TSMTTTPVL LPDWSLPFVLET+ASGIGLGTMLSQNG
Sbjct: 69  TSMTTTPVLALPDWSLPFVLETNASGIGLGTMLSQNG 105

[Close]

BLAST of Cmc05g0126201 vs. NCBI nr
Match: KAA0057348.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK09368.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 8.4e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK
Sbjct: 42  MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 101

Query: 61  TSMTTTPVLTLPDWSLPFVLETDAS 86
           TSMTTTPVLTLPDWSLPFVLETDAS
Sbjct: 102 TSMTTTPVLTLPDWSLPFVLETDAS 126

[Close]

BLAST of Cmc05g0126201 vs. NCBI nr
Match: XP_031745419.1 (uncharacterized protein LOC116405630 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+N P+PKD+TGLRGFLGLTGYYRRFVK YGEIAAPLTKLLQKNAFHWNEEATIAF+ LK
Sbjct: 655 MVNWPRPKDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAFHWNEEATIAFDQLK 714

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
            +MTT PVL LPDWS PF +ETDASG+GLG +LSQ+G
Sbjct: 715 LAMTTLPVLALPDWSQPFTIETDASGVGLGAVLSQDG 751

[Close]

BLAST of Cmc05g0126201 vs. NCBI nr
Match: XP_031742100.1 (uncharacterized protein LOC116404055 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+N P+PKD+TGLRGFLGLTGYYRRFVK YGEIAAPLTKLLQKNAFHWNEEATIAF+ LK
Sbjct: 785 MVNWPRPKDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAFHWNEEATIAFDQLK 844

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
            +MTT PVL LPDWS PF +ETDASG+GLG +LSQ+G
Sbjct: 845 LAMTTLPVLALPDWSQPFTIETDASGVGLGAVLSQDG 881

[Close]

BLAST of Cmc05g0126201 vs. NCBI nr
Match: KAE8637598.1 (hypothetical protein CSA_022681 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+N P+PKD+TGLRGFLGLTGYYRRFVK YGEIAAPLTKLLQKNAFHWNEEATIAF+ LK
Sbjct: 341 MVNWPRPKDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAFHWNEEATIAFDQLK 400

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
            +MTT PVL LPDWS PF +ETDASG+GLG +LSQ+G
Sbjct: 401 LAMTTLPVLALPDWSQPFTIETDASGVGLGAVLSQDG 437

[Close]

BLAST of Cmc05g0126201 vs. ExPASy Swiss-Prot
Match: P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+  P+PK+ T LRGFLGLTGYYRRFVK YG+I  PLT+LL+KN+  W E A +AF+ LK
Sbjct: 54  MVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALK 113

Query: 61  TSMTTTPVLTLPDWSLPFV 80
            ++TT PVL LPD  LPFV
Sbjct: 114 GAVTTLPVLALPDLKLPFV 132

[Close]

BLAST of Cmc05g0126201 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-16
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNE--EATIAFEL 60
           +++ P P     +R FLGLTGYYR+F+  Y +IA P+T  L+K      +  E   AFE 
Sbjct: 429 IVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEK 488

Query: 61  LKTSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
           LK  +   P+L LPD+   FVL TDAS + LG +LSQNG
Sbjct: 489 LKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNG 527

[Close]

BLAST of Cmc05g0126201 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.4e-15
Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 5   PQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKN--AFHWNEEATIAFELLKTS 64
           P P     ++ FLGLTGYYR+F+  + +IA P+TK L+KN      N E   AF+ LK  
Sbjct: 434 PIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYL 493

Query: 65  MTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
           ++  P+L +PD++  F L TDAS + LG +LSQ+G
Sbjct: 494 ISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG 528

[Close]

BLAST of Cmc05g0126201 vs. ExPASy Swiss-Prot
Match: P10273 (Gag-Pol polyprotein OS=Feline leukemia virus OX=11768 GN=pol PE=3 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 1    MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA-FHWNEEATIAFELL 60
            +++ P PK+   +R FLG  GY R ++ G+ E+AAPL  L +    F W  E  +AFE +
Sbjct: 914  ILSIPVPKNSRQVREFLGTAGYCRLWIPGFAELAAPLYPLTRPGTLFQWGTEQQLAFEDI 973

Query: 61   KTSMTTTPVLTLPDWSLPFVLETDA-SGIGLGTMLSQNG 98
            K ++ ++P L LPD + PF L  D  SG   G ++ + G
Sbjct: 974  KKALLSSPALGLPDITKPFELFIDENSGFAKGVLVQKLG 1012

[Close]

BLAST of Cmc05g0126201 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-11
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 5   PQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLL------------QKNAFHWNEEA 64
           P+P  V  +R FLGL  YYR F+K +  IA P+T +L            +K    +NE  
Sbjct: 409 PEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQ 468

Query: 65  TIAFELLKTSMTTTPV-LTLPDWSLPFVLETDASGIGLGTMLSQNG 98
             AF+ L+  + +  V L  PD+  PF L TDAS  G+G +LSQ G
Sbjct: 469 RNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG 514

[Close]

BLAST of Cmc05g0126201 vs. ExPASy TrEMBL
Match: A0A5A7TEH1 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45873G00010 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLL KNAFHWNEEATIAFELLK
Sbjct: 9   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLHKNAFHWNEEATIAFELLK 68

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
           TSMTTTPVL LPDWSLPFVLET+ASGIGLGTMLSQNG
Sbjct: 69  TSMTTTPVLALPDWSLPFVLETNASGIGLGTMLSQNG 105

[Close]

BLAST of Cmc05g0126201 vs. ExPASy TrEMBL
Match: A0A5A7UQF1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6314G00010 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK
Sbjct: 42  MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 101

Query: 61  TSMTTTPVLTLPDWSLPFVLETDAS 86
           TSMTTTPVLTLPDWSLPFVLETDAS
Sbjct: 102 TSMTTTPVLTLPDWSLPFVLETDAS 126

[Close]

BLAST of Cmc05g0126201 vs. ExPASy TrEMBL
Match: A0A5D3CPQ1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00210 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-39
Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
          M+  PQPKD+TGLRGFLGLTGYYRRFVK YGEIAAPLTKLLQKNAF W+EEAT+AFE LK
Sbjct: 1  MLQWPQPKDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAFKWDEEATLAFESLK 60

Query: 61 TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQN 97
          T+MTT PVL LPDWSLPF++ETDASG GLG +LSQN
Sbjct: 61 TAMTTIPVLALPDWSLPFMIETDASGSGLGAVLSQN 96

[Close]

BLAST of Cmc05g0126201 vs. ExPASy TrEMBL
Match: A0A5A7TLY4 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004020 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+  PQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKN+F W+EEAT+AFE LK
Sbjct: 289 MLQWPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNSFKWDEEATVAFENLK 348

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
            +MTT PVL LPDWSLPF++E DASG GLG +LSQNG
Sbjct: 349 LAMTTIPVLALPDWSLPFMVEIDASGSGLGAVLSQNG 385

[Close]

BLAST of Cmc05g0126201 vs. ExPASy TrEMBL
Match: A0A5A7TII1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001860 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 78/97 (80.41%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+  PQPKD+TGLRGFLGLTGYYRRFVK YGEIAAPLTKLLQKNAF W+E AT+AFE LK
Sbjct: 788 MLQWPQPKDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAFKWDENATLAFESLK 847

Query: 61  TSMTTTPVLTLPDWSLPFVLETDASGIGLGTMLSQNG 98
           ++MTT PVL LPDWSLPF++ETDASG GLG +LSQNG
Sbjct: 848 SAMTTIPVLALPDWSLPFMIETDASGSGLGAVLSQNG 884

[Close]

BLAST of Cmc05g0126201 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1   MINCPQPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFHWNEEATIAFELLK 60
           M+  P+PK+ T LRGFLGLTGYYRRFVK YG+I  PLT+LL+KN+  W E A +AF+ LK
Sbjct: 54  MVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALK 113

Query: 61  TSMTTTPVLTLPDWSLPFV 80
            ++TT PVL LPD  LPFV
Sbjct: 114 GAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc05g0126201 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041543.1	3.9e-47	96.91	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]	[more]
KAA0057348.1	8.4e-42	100.00	Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK09368.1 Retrotransp...	[more]
XP_031745419.1	1.0e-39	81.44	uncharacterized protein LOC116405630 [Cucumis sativus]	[more]
XP_031742100.1	1.0e-39	81.44	uncharacterized protein LOC116404055 [Cucumis sativus]	[more]
KAE8637598.1	1.0e-39	81.44	hypothetical protein CSA_022681 [Cucumis sativus]	[more]

BLAST of Cmc05g0126201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92523	1.8e-23	63.29	Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 ...	[more]
P20825	2.8e-16	45.45	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.4e-15	44.21	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10273	2.1e-11	37.37	Gag-Pol polyprotein OS=Feline leukemia virus OX=11768 GN=pol PE=3 SV=2	[more]
P10401	2.7e-11	38.68	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]

BLAST of Cmc05g0126201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TEH1	1.9e-47	96.91	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7UQF1	4.1e-42	100.00	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5D3CPQ1	4.2e-39	82.29	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TLY4	1.2e-38	81.44	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TII1	1.2e-38	80.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cmc05g0126201 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-24	63.29	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 48..97 e-value: 5.3E-14 score: 52.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..78 e-value: 6.8E-26 score: 92.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 4..73
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 4..73
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0126201.1	Cmc05g0126201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding